Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010231.t1 | XP_024640663.1 | 86.1 | 346 | 38 | 1 | 38 | 383 | 9 | 344 | 4.90E-169 | 604 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010231.t1 | Q84WU6 | 39.4 | 381 | 164 | 6 | 52 | 383 | 13 | 375 | 5.5e-68 | 259.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010231.t1 | G7KAA1 | 89.1 | 221 | 24 | 0 | 38 | 258 | 9 | 229 | 4.9e-110 | 407.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene010231.t1 | TF | B3-ARF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010231.t1 | MTR_5g062970 | 89.140 | 221 | 24 | 0 | 38 | 258 | 9 | 229 | 2.64e-144 | 409 |
| MS.gene010231.t1 | MTR_5g061220 | 58.659 | 358 | 102 | 4 | 64 | 383 | 16 | 365 | 8.24e-140 | 408 |
| MS.gene010231.t1 | MTR_1g058210 | 61.562 | 333 | 104 | 6 | 67 | 383 | 12 | 336 | 4.14e-130 | 381 |
| MS.gene010231.t1 | MTR_5g060630 | 55.801 | 362 | 116 | 7 | 64 | 383 | 9 | 368 | 3.06e-120 | 358 |
| MS.gene010231.t1 | MTR_5g460740 | 55.801 | 362 | 116 | 7 | 64 | 383 | 9 | 368 | 3.06e-120 | 358 |
| MS.gene010231.t1 | MTR_5g061890 | 57.186 | 334 | 114 | 8 | 67 | 383 | 12 | 333 | 2.91e-118 | 349 |
| MS.gene010231.t1 | MTR_5g060780 | 56.287 | 334 | 117 | 8 | 67 | 383 | 12 | 333 | 9.55e-117 | 345 |
| MS.gene010231.t1 | MTR_5g460920 | 56.287 | 334 | 117 | 8 | 67 | 383 | 12 | 333 | 6.13e-116 | 343 |
| MS.gene010231.t1 | MTR_2g024430 | 52.727 | 330 | 132 | 10 | 67 | 383 | 20 | 338 | 2.12e-104 | 317 |
| MS.gene010231.t1 | MTR_5g040880 | 49.240 | 329 | 151 | 8 | 64 | 383 | 8 | 329 | 4.86e-99 | 304 |
| MS.gene010231.t1 | MTR_5g082140 | 50.456 | 329 | 145 | 10 | 67 | 383 | 12 | 334 | 2.08e-94 | 290 |
| MS.gene010231.t1 | MTR_2g006270 | 49.701 | 334 | 137 | 10 | 67 | 382 | 13 | 333 | 2.36e-92 | 285 |
| MS.gene010231.t1 | MTR_5g040740 | 51.911 | 314 | 127 | 9 | 67 | 366 | 12 | 315 | 6.86e-92 | 282 |
| MS.gene010231.t1 | MTR_2g006380 | 48.193 | 332 | 140 | 13 | 67 | 382 | 20 | 335 | 1.31e-87 | 272 |
| MS.gene010231.t1 | MTR_3g073420 | 40.379 | 369 | 159 | 8 | 67 | 383 | 19 | 378 | 9.91e-79 | 253 |
| MS.gene010231.t1 | MTR_2g094570 | 37.566 | 378 | 158 | 8 | 67 | 382 | 11 | 372 | 2.63e-77 | 251 |
| MS.gene010231.t1 | MTR_2g094570 | 37.467 | 379 | 157 | 8 | 67 | 382 | 11 | 372 | 3.50e-77 | 252 |
| MS.gene010231.t1 | MTR_2g094570 | 37.467 | 379 | 157 | 8 | 67 | 382 | 67 | 428 | 8.11e-77 | 252 |
| MS.gene010231.t1 | MTR_1g094960 | 37.802 | 373 | 169 | 7 | 64 | 382 | 16 | 379 | 3.18e-74 | 242 |
| MS.gene010231.t1 | MTR_1g064430 | 36.096 | 374 | 177 | 7 | 67 | 382 | 27 | 396 | 1.80e-70 | 234 |
| MS.gene010231.t1 | MTR_1g064430 | 36.096 | 374 | 177 | 7 | 67 | 382 | 40 | 409 | 2.53e-70 | 234 |
| MS.gene010231.t1 | MTR_5g062960 | 84.906 | 106 | 16 | 0 | 278 | 383 | 1 | 106 | 1.68e-59 | 191 |
| MS.gene010231.t1 | MTR_5g060770 | 46.442 | 267 | 100 | 8 | 116 | 382 | 10 | 233 | 2.69e-58 | 193 |
| MS.gene010231.t1 | MTR_4g058930 | 34.667 | 375 | 179 | 10 | 67 | 382 | 12 | 379 | 5.55e-57 | 197 |
| MS.gene010231.t1 | MTR_4g058930 | 34.667 | 375 | 179 | 10 | 67 | 382 | 12 | 379 | 7.11e-57 | 197 |
| MS.gene010231.t1 | MTR_7g101275 | 33.654 | 312 | 182 | 7 | 77 | 370 | 2 | 306 | 2.10e-56 | 190 |
| MS.gene010231.t1 | MTR_7g101280 | 29.610 | 385 | 200 | 8 | 63 | 383 | 27 | 404 | 9.40e-56 | 194 |
| MS.gene010231.t1 | MTR_0041s0110 | 29.610 | 385 | 200 | 8 | 63 | 383 | 27 | 404 | 9.40e-56 | 194 |
| MS.gene010231.t1 | MTR_2g005240 | 33.728 | 338 | 195 | 7 | 67 | 383 | 23 | 352 | 4.37e-53 | 187 |
| MS.gene010231.t1 | MTR_8g100050 | 33.728 | 338 | 196 | 7 | 67 | 383 | 59 | 389 | 4.94e-53 | 187 |
| MS.gene010231.t1 | MTR_2g014770 | 31.792 | 346 | 202 | 7 | 63 | 383 | 49 | 385 | 6.71e-53 | 185 |
| MS.gene010231.t1 | MTR_8g100050 | 33.728 | 338 | 196 | 7 | 67 | 383 | 59 | 389 | 1.47e-52 | 187 |
| MS.gene010231.t1 | MTR_2g014770 | 31.792 | 346 | 202 | 7 | 63 | 383 | 49 | 385 | 1.66e-52 | 185 |
| MS.gene010231.t1 | MTR_4g021580 | 31.940 | 335 | 204 | 6 | 67 | 383 | 19 | 347 | 9.91e-51 | 179 |
| MS.gene010231.t1 | MTR_4g021580 | 31.940 | 335 | 204 | 6 | 67 | 383 | 19 | 347 | 1.85e-50 | 179 |
| MS.gene010231.t1 | MTR_0041s0120 | 31.173 | 324 | 186 | 7 | 77 | 370 | 2 | 318 | 2.97e-49 | 171 |
| MS.gene010231.t1 | MTR_7g062540 | 32.249 | 338 | 199 | 10 | 67 | 383 | 14 | 342 | 5.58e-48 | 173 |
| MS.gene010231.t1 | MTR_8g027440 | 33.038 | 339 | 194 | 10 | 67 | 383 | 29 | 356 | 4.06e-47 | 171 |
| MS.gene010231.t1 | MTR_8g079492 | 32.941 | 340 | 199 | 10 | 66 | 383 | 22 | 354 | 6.55e-47 | 171 |
| MS.gene010231.t1 | MTR_8g079492 | 32.941 | 340 | 199 | 10 | 66 | 383 | 22 | 354 | 7.06e-47 | 171 |
| MS.gene010231.t1 | MTR_2g018690 | 32.653 | 343 | 197 | 11 | 66 | 383 | 22 | 355 | 2.34e-46 | 170 |
| MS.gene010231.t1 | MTR_4g124900 | 32.174 | 345 | 198 | 9 | 63 | 382 | 19 | 352 | 9.34e-46 | 168 |
| MS.gene010231.t1 | MTR_2g043250 | 31.351 | 370 | 210 | 10 | 38 | 382 | 2 | 352 | 1.17e-45 | 168 |
| MS.gene010231.t1 | MTR_4g124900 | 32.174 | 345 | 198 | 9 | 63 | 382 | 19 | 352 | 1.37e-45 | 168 |
| MS.gene010231.t1 | MTR_3g064050 | 31.487 | 343 | 201 | 9 | 66 | 383 | 25 | 358 | 3.02e-45 | 166 |
| MS.gene010231.t1 | MTR_5g076270 | 32.070 | 343 | 199 | 10 | 66 | 383 | 23 | 356 | 5.84e-45 | 166 |
| MS.gene010231.t1 | MTR_2g093740 | 30.904 | 343 | 209 | 8 | 67 | 383 | 56 | 396 | 9.51e-45 | 164 |
| MS.gene010231.t1 | MTR_2g093740 | 30.612 | 343 | 210 | 7 | 67 | 383 | 56 | 396 | 1.96e-44 | 164 |
| MS.gene010231.t1 | MTR_2g093740 | 30.612 | 343 | 210 | 7 | 67 | 383 | 56 | 396 | 2.73e-44 | 164 |
| MS.gene010231.t1 | MTR_1g024025 | 31.105 | 344 | 206 | 8 | 63 | 383 | 39 | 374 | 3.22e-44 | 164 |
| MS.gene010231.t1 | MTR_4g088210 | 27.824 | 363 | 198 | 7 | 63 | 383 | 34 | 374 | 1.66e-42 | 158 |
| MS.gene010231.t1 | MTR_4g088210 | 27.824 | 363 | 198 | 7 | 63 | 383 | 34 | 374 | 1.77e-42 | 158 |
| MS.gene010231.t1 | MTR_2g093740 | 29.775 | 356 | 209 | 9 | 67 | 383 | 56 | 409 | 2.14e-41 | 155 |
| MS.gene010231.t1 | MTR_2g093740 | 29.494 | 356 | 210 | 8 | 67 | 383 | 56 | 409 | 3.50e-41 | 154 |
| MS.gene010231.t1 | MTR_2g093740 | 29.775 | 356 | 209 | 9 | 67 | 383 | 56 | 409 | 3.69e-41 | 155 |
| MS.gene010231.t1 | MTR_4g060460 | 30.321 | 343 | 211 | 6 | 67 | 383 | 54 | 394 | 6.68e-41 | 154 |
| MS.gene010231.t1 | MTR_4g060460 | 30.321 | 343 | 211 | 6 | 67 | 383 | 54 | 394 | 7.03e-41 | 154 |
| MS.gene010231.t1 | MTR_8g101360 | 29.630 | 351 | 197 | 7 | 66 | 383 | 30 | 363 | 2.95e-40 | 152 |
| MS.gene010231.t1 | MTR_5g460910 | 38.577 | 267 | 99 | 9 | 116 | 382 | 27 | 228 | 3.42e-38 | 140 |
| MS.gene010231.t1 | MTR_8g079492 | 32.852 | 277 | 162 | 8 | 124 | 383 | 3 | 272 | 3.71e-36 | 140 |
| MS.gene010231.t1 | MTR_2g093740 | 32.468 | 231 | 140 | 4 | 167 | 383 | 38 | 266 | 1.06e-30 | 124 |
| MS.gene010231.t1 | MTR_2g093740 | 32.468 | 231 | 140 | 4 | 167 | 383 | 38 | 266 | 1.40e-30 | 123 |
| MS.gene010231.t1 | MTR_2g093740 | 30.738 | 244 | 140 | 5 | 167 | 383 | 38 | 279 | 1.70e-27 | 114 |
| MS.gene010231.t1 | MTR_2g093740 | 30.738 | 244 | 140 | 5 | 167 | 383 | 38 | 279 | 1.90e-27 | 114 |
| MS.gene010231.t1 | MTR_8g446900 | 27.211 | 294 | 182 | 7 | 107 | 382 | 6 | 285 | 1.37e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010231.t1 | AT1G77850 | 41.398 | 372 | 146 | 9 | 68 | 383 | 20 | 375 | 1.95e-83 | 265 |
| MS.gene010231.t1 | AT1G77850 | 41.398 | 372 | 146 | 9 | 68 | 383 | 20 | 375 | 2.02e-83 | 266 |
| MS.gene010231.t1 | AT4G30080 | 36.559 | 372 | 170 | 9 | 67 | 382 | 19 | 380 | 7.31e-72 | 237 |
| MS.gene010231.t1 | AT2G28350 | 36.082 | 388 | 157 | 10 | 67 | 382 | 10 | 378 | 6.08e-67 | 224 |
| MS.gene010231.t1 | AT2G28350 | 36.082 | 388 | 157 | 10 | 67 | 382 | 10 | 378 | 1.02e-66 | 224 |
| MS.gene010231.t1 | AT2G46530 | 34.412 | 340 | 190 | 8 | 66 | 383 | 20 | 348 | 2.07e-56 | 194 |
| MS.gene010231.t1 | AT2G46530 | 34.412 | 340 | 190 | 8 | 66 | 383 | 41 | 369 | 2.31e-56 | 195 |
| MS.gene010231.t1 | AT3G61830 | 33.628 | 339 | 194 | 7 | 66 | 383 | 24 | 352 | 8.49e-55 | 190 |
| MS.gene010231.t1 | AT1G59750 | 32.153 | 339 | 199 | 8 | 67 | 383 | 22 | 351 | 3.93e-52 | 184 |
| MS.gene010231.t1 | AT1G59750 | 32.153 | 339 | 199 | 8 | 67 | 383 | 22 | 351 | 3.93e-52 | 184 |
| MS.gene010231.t1 | AT1G59750 | 32.153 | 339 | 199 | 8 | 67 | 383 | 22 | 351 | 4.05e-52 | 184 |
| MS.gene010231.t1 | AT1G59750 | 32.153 | 339 | 199 | 8 | 67 | 383 | 22 | 351 | 4.51e-52 | 184 |
| MS.gene010231.t1 | AT4G23980 | 31.471 | 340 | 199 | 8 | 67 | 383 | 12 | 340 | 4.60e-51 | 181 |
| MS.gene010231.t1 | AT4G23980 | 31.471 | 340 | 199 | 8 | 67 | 383 | 12 | 340 | 5.85e-51 | 181 |
| MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.19e-51 | 183 |
| MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.45e-51 | 182 |
| MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.45e-51 | 182 |
| MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.45e-51 | 182 |
| MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.45e-51 | 182 |
| MS.gene010231.t1 | AT1G34310 | 32.249 | 338 | 192 | 9 | 67 | 382 | 27 | 349 | 2.83e-47 | 170 |
| MS.gene010231.t1 | AT5G37020 | 31.778 | 343 | 200 | 10 | 66 | 383 | 21 | 354 | 4.49e-47 | 171 |
| MS.gene010231.t1 | AT2G33860 | 32.164 | 342 | 198 | 9 | 67 | 383 | 54 | 386 | 6.98e-47 | 169 |
| MS.gene010231.t1 | AT5G37020 | 31.778 | 343 | 200 | 10 | 66 | 383 | 21 | 354 | 9.49e-47 | 171 |
| MS.gene010231.t1 | AT1G34390 | 31.765 | 340 | 191 | 11 | 67 | 383 | 27 | 348 | 1.06e-46 | 168 |
| MS.gene010231.t1 | AT1G35540 | 31.268 | 339 | 194 | 9 | 67 | 382 | 27 | 349 | 3.37e-46 | 167 |
| MS.gene010231.t1 | AT1G35520 | 32.153 | 339 | 193 | 9 | 67 | 383 | 27 | 350 | 7.66e-46 | 166 |
| MS.gene010231.t1 | AT1G30330 | 31.897 | 348 | 193 | 11 | 66 | 383 | 22 | 355 | 2.71e-45 | 167 |
| MS.gene010231.t1 | AT1G30330 | 31.897 | 348 | 193 | 11 | 66 | 383 | 24 | 357 | 2.87e-45 | 167 |
| MS.gene010231.t1 | AT1G30330 | 31.897 | 348 | 193 | 11 | 66 | 383 | 24 | 357 | 2.87e-45 | 167 |
| MS.gene010231.t1 | AT1G35240 | 31.268 | 339 | 196 | 9 | 67 | 383 | 27 | 350 | 6.80e-45 | 163 |
| MS.gene010231.t1 | AT1G19850 | 30.469 | 384 | 232 | 11 | 23 | 382 | 2 | 374 | 6.03e-44 | 163 |
| MS.gene010231.t1 | AT1G19850 | 30.469 | 384 | 232 | 11 | 23 | 382 | 13 | 385 | 6.40e-44 | 163 |
| MS.gene010231.t1 | AT1G34410 | 30.678 | 339 | 198 | 9 | 67 | 383 | 27 | 350 | 3.74e-43 | 159 |
| MS.gene010231.t1 | AT5G20730 | 32.464 | 345 | 195 | 10 | 64 | 382 | 21 | 353 | 1.31e-42 | 159 |
| MS.gene010231.t1 | AT1G19220 | 30.925 | 346 | 201 | 9 | 64 | 383 | 20 | 353 | 5.72e-42 | 157 |
| MS.gene010231.t1 | AT3G61830 | 33.564 | 289 | 167 | 6 | 110 | 383 | 23 | 301 | 6.32e-42 | 154 |
| MS.gene010231.t1 | AT5G20730 | 31.519 | 349 | 194 | 11 | 64 | 382 | 21 | 354 | 4.88e-41 | 155 |
| MS.gene010231.t1 | AT5G20730 | 32.370 | 346 | 195 | 11 | 64 | 382 | 21 | 354 | 5.49e-41 | 154 |
| MS.gene010231.t1 | AT5G60450 | 29.944 | 354 | 210 | 11 | 60 | 383 | 34 | 379 | 1.02e-40 | 153 |
| MS.gene010231.t1 | AT5G60450 | 30.000 | 350 | 207 | 11 | 64 | 383 | 62 | 403 | 1.99e-40 | 152 |
| MS.gene010231.t1 | AT2G46530 | 35.593 | 236 | 130 | 5 | 163 | 383 | 33 | 261 | 4.28e-39 | 146 |
| MS.gene010231.t1 | AT1G34170 | 28.493 | 365 | 218 | 11 | 45 | 382 | 1 | 349 | 1.43e-38 | 144 |
| MS.gene010231.t1 | AT2G33860 | 32.051 | 234 | 136 | 5 | 167 | 383 | 2 | 229 | 3.32e-33 | 129 |
| MS.gene010231.t1 | AT5G37020 | 30.597 | 268 | 158 | 8 | 135 | 383 | 1 | 259 | 3.84e-32 | 128 |
| MS.gene010231.t1 | AT1G34170 | 27.247 | 356 | 208 | 11 | 45 | 382 | 1 | 323 | 3.41e-31 | 124 |
| MS.gene010231.t1 | AT1G34170 | 26.849 | 365 | 198 | 11 | 45 | 382 | 1 | 323 | 3.44e-31 | 124 |
| MS.gene010231.t1 | AT1G43950 | 36.058 | 208 | 111 | 7 | 67 | 265 | 27 | 221 | 8.86e-31 | 117 |
Find 98 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTATCCTCCTTCCATTTC+CGG | 0.160827 | 5.1:-48402030 | MS.gene010231:CDS |
| TTTGGAATCTTCGAGATTTC+AGG | 0.221871 | 5.1:+48402346 | None:intergenic |
| TTTGGATTCTGCGAGATTTC+AGG | 0.242925 | 5.1:+48397541 | None:intergenic |
| AGCACATTTCTGCCAGATTT+TGG | 0.250965 | 5.1:+48402155 | None:intergenic |
| CCCTAATTGGCGCATGCTTC+AGG | 0.281500 | 5.1:-48401281 | MS.gene010231:intron |
| AAGGAGGATAACGATGAATA+AGG | 0.293928 | 5.1:+48402040 | None:intergenic |
| CTGGAGGAGCTTCTTGTTCA+TGG | 0.301419 | 5.1:+48401917 | None:intergenic |
| ATGATGCCATGAAGGTTAAT+TGG | 0.308769 | 5.1:-48401420 | MS.gene010231:CDS |
| CTCATTCTAATGTCCCTAAT+TGG | 0.313594 | 5.1:-48401294 | MS.gene010231:CDS |
| TGCCAAGGATTGACACGGTT+TGG | 0.344134 | 5.1:+48397523 | None:intergenic |
| ACCTGAAGCATGCGCCAATT+AGG | 0.352249 | 5.1:+48401280 | None:intergenic |
| TGCCAAGGATTGACACAGTT+TGG | 0.353376 | 5.1:+48402328 | None:intergenic |
| GGTAACAGAGAAGGCGGTTA+TGG | 0.361245 | 5.1:-48401539 | MS.gene010231:CDS |
| GGTTATGGATGCGGTGGAAT+TGG | 0.365128 | 5.1:-48401524 | MS.gene010231:CDS |
| AGATGTCCAATTAACCTTCA+TGG | 0.371714 | 5.1:+48401414 | None:intergenic |
| CCTGAAGCATGCGCCAATTA+GGG | 0.377642 | 5.1:+48401281 | None:intergenic |
| TCGTCTTCGGCAGGAACCTC+TGG | 0.379847 | 5.1:+48401898 | None:intergenic |
| TGGCCATGGCCATCCGTTAC+GGG | 0.387740 | 5.1:+48401937 | None:intergenic |
| CTGACATTCATGGCCGAGTC+TGG | 0.393534 | 5.1:-48401723 | MS.gene010231:CDS |
| ACACAATCTGATTGCAATAG+TGG | 0.393698 | 5.1:-48401838 | MS.gene010231:CDS |
| GCTCCCCGGTATCACTTAAC+AGG | 0.396579 | 5.1:+48402223 | None:intergenic |
| GACTGAAATGATGCCGGAAA+TGG | 0.400752 | 5.1:+48402017 | None:intergenic |
| ATGGCCATGGCCATCCGTTA+CGG | 0.402053 | 5.1:+48401936 | None:intergenic |
| CTCTCCGTCACTGACATTCA+TGG | 0.403879 | 5.1:-48401733 | MS.gene010231:CDS |
| ATGAAGGTTAATTGGACATC+TGG | 0.409873 | 5.1:-48401412 | MS.gene010231:CDS |
| TACGGGAGTGAGGAGAAGTT+TGG | 0.412326 | 5.1:+48401954 | None:intergenic |
| GTATATACAGTTCAGCTTTG+TGG | 0.420575 | 5.1:+48402290 | None:intergenic |
| TCTCTTTATTATAGGTTAAG+TGG | 0.429394 | 5.1:-48397570 | MS.gene010231:intron |
| GATGACATTGTTTCAGCCTC+AGG | 0.431757 | 5.1:-48401341 | MS.gene010231:CDS |
| GATCTTGCCGAAGCTTAACT+TGG | 0.446257 | 5.1:-48401779 | MS.gene010231:CDS |
| TTACCATCCCTACCAAAATC+TGG | 0.452282 | 5.1:-48402167 | MS.gene010231:CDS |
| TGTATTATCCGAGAGCGAAT+TGG | 0.460538 | 5.1:-48401474 | MS.gene010231:CDS |
| TCTGTCCTGTTAAGTGATAC+CGG | 0.467467 | 5.1:-48402228 | MS.gene010231:CDS |
| CTCTTTATTATAGGTTAAGT+GGG | 0.469153 | 5.1:-48397569 | MS.gene010231:intron |
| TCTGATTGCAATAGTGGCTA+TGG | 0.469763 | 5.1:-48401832 | MS.gene010231:CDS |
| GAAGATTCTTCTTTCTTCAA+AGG | 0.471685 | 5.1:+48401373 | None:intergenic |
| ATCCAAACCGTGTCAATCCT+TGG | 0.478895 | 5.1:-48397525 | MS.gene010231:CDS |
| GAATCGTCCAAGTTAAGCTT+CGG | 0.478925 | 5.1:+48401772 | None:intergenic |
| CCTACTGAAAAGGTGTCTCT+TGG | 0.480185 | 5.1:+48401672 | None:intergenic |
| ATTGTAGCCATCCTCGTCTT+CGG | 0.480424 | 5.1:+48401885 | None:intergenic |
| TAAACTTTAGAATGTAGCTT+CGG | 0.481122 | 5.1:+48402114 | None:intergenic |
| AGGAGGATAACGATGAATAA+GGG | 0.485184 | 5.1:+48402041 | None:intergenic |
| AAGTCCATCCCCTACTGAAA+AGG | 0.489646 | 5.1:+48401662 | None:intergenic |
| TTCCAAACTGTGTCAATCCT+TGG | 0.497383 | 5.1:-48402330 | MS.gene010231:CDS |
| AAAATCTGGCAGAAATGTGC+TGG | 0.507785 | 5.1:-48402153 | MS.gene010231:CDS |
| CTGTCCTGTTAAGTGATACC+GGG | 0.511775 | 5.1:-48402227 | MS.gene010231:CDS |
| AAACTGTGTCAATCCTTGGC+AGG | 0.512278 | 5.1:-48402326 | MS.gene010231:CDS |
| TAGCCATCCTCGTCTTCGGC+AGG | 0.513990 | 5.1:+48401889 | None:intergenic |
| AGAGAAGGCGGTTATGGATG+CGG | 0.535241 | 5.1:-48401533 | MS.gene010231:CDS |
| AAACCGTGTCAATCCTTGGC+AGG | 0.537754 | 5.1:-48397521 | None:intergenic |
| GAGCTTCTTGTTCATGGCCA+TGG | 0.538260 | 5.1:+48401923 | None:intergenic |
| ATGACATTGTTTCAGCCTCA+GGG | 0.540321 | 5.1:-48401340 | MS.gene010231:CDS |
| GTTGGAATATGCCGGAAAAG+TGG | 0.542178 | 5.1:-48401565 | MS.gene010231:CDS |
| AAATCAAACCAATTCGCTCT+CGG | 0.544399 | 5.1:+48401466 | None:intergenic |
| TATGGATGCGGTGGAATTGG+CGG | 0.548189 | 5.1:-48401521 | MS.gene010231:CDS |
| ACAGAGCTCTCAGCACGTCT+AGG | 0.552883 | 5.1:+48402246 | None:intergenic |
| AGATATTCGTTGGAATATGC+CGG | 0.558862 | 5.1:-48401573 | MS.gene010231:CDS |
| TCAGCTGGGAAGATATTCGT+TGG | 0.559165 | 5.1:-48401583 | MS.gene010231:CDS |
| AACAACAAGAAACTCGTCGC+TGG | 0.566110 | 5.1:-48401631 | MS.gene010231:CDS |
| GGCAAGATCAAGTCAACGCA+AGG | 0.570350 | 5.1:+48401793 | None:intergenic |
| CAACCTGCCAAGGATTGACA+CGG | 0.574441 | 5.1:+48397518 | None:intergenic |
| CATGTTCTAAGTGACCTTGT+GGG | 0.576431 | 5.1:+48402085 | None:intergenic |
| TTGGAATATGCCGGAAAAGT+GGG | 0.577884 | 5.1:-48401564 | MS.gene010231:CDS |
| CTCCTCACTCCCGTAACGGA+TGG | 0.581441 | 5.1:-48401946 | MS.gene010231:CDS |
| TGTTGTTGATGATGCCATGA+AGG | 0.584620 | 5.1:-48401428 | MS.gene010231:CDS |
| ACATGTTCTAAGTGACCTTG+TGG | 0.589249 | 5.1:+48402084 | None:intergenic |
| TGCTTCGGAATGTAGCTCCC+CGG | 0.594410 | 5.1:+48402209 | None:intergenic |
| ACTTCTCCTCACTCCCGTAA+CGG | 0.594736 | 5.1:-48401950 | MS.gene010231:CDS |
| ACTCCCGTAACGGATGGCCA+TGG | 0.599048 | 5.1:-48401940 | MS.gene010231:CDS |
| AGGCGTAGTTCAACCTGCCA+AGG | 0.603512 | 5.1:+48397508 | None:intergenic |
| GGCCATCCGTTACGGGAGTG+AGG | 0.606038 | 5.1:+48401944 | None:intergenic |
| TGAATAAGTTCAACCTGCCA+AGG | 0.607758 | 5.1:+48402313 | None:intergenic |
| ATTAACGACTGAAATGATGC+CGG | 0.608025 | 5.1:+48402011 | None:intergenic |
| TCTTCGGCAGGAACCTCTGG+AGG | 0.611963 | 5.1:+48401901 | None:intergenic |
| AGAGGTTCCTGCCGAAGACG+AGG | 0.616143 | 5.1:-48401896 | MS.gene010231:CDS |
| AAGTGGGAAGGTAACAGAGA+AGG | 0.628618 | 5.1:-48401548 | MS.gene010231:CDS |
| AAGGGTGATGATTGTGTGAG+CGG | 0.629467 | 5.1:+48402059 | None:intergenic |
| GTTCCTGCCGAAGACGAGGA+TGG | 0.629556 | 5.1:-48401892 | MS.gene010231:CDS |
| TATGCGTGTACTGCCAGACT+CGG | 0.634039 | 5.1:+48401710 | None:intergenic |
| GAAGGCGGTTATGGATGCGG+TGG | 0.634390 | 5.1:-48401530 | MS.gene010231:CDS |
| GAAATGATGCCGGAAATGGA+AGG | 0.642956 | 5.1:+48402021 | None:intergenic |
| TTGTGTGAGAATCTTGACAA+AGG | 0.644198 | 5.1:+48401855 | None:intergenic |
| GTGACGGAGAGTGTCTGAGA+TGG | 0.649352 | 5.1:+48401745 | None:intergenic |
| AAAGTTTACTACTTCCCACA+AGG | 0.649931 | 5.1:-48402099 | MS.gene010231:CDS |
| GAAAATACTACATCTGTGTG+AGG | 0.654483 | 5.1:+48401976 | None:intergenic |
| TGACATTGTTTCAGCCTCAG+GGG | 0.655401 | 5.1:-48401339 | MS.gene010231:CDS |
| TCGGCCATGAATGTCAGTGA+CGG | 0.657021 | 5.1:+48401729 | None:intergenic |
| GCAAGATCAAGTCAACGCAA+GGG | 0.677166 | 5.1:+48401794 | None:intergenic |
| TGGGAAGGTAACAGAGAAGG+CGG | 0.684452 | 5.1:-48401545 | MS.gene010231:CDS |
| ATGATGCCGGAAATGGAAGG+AGG | 0.688005 | 5.1:+48402024 | None:intergenic |
| TGAACAAGAAGCTCCTCCAG+AGG | 0.697806 | 5.1:-48401914 | MS.gene010231:CDS |
| GGTGTCTCTTGGATTTACCG+CGG | 0.707333 | 5.1:+48401683 | None:intergenic |
| AATATGCCGGAAAAGTGGGA+AGG | 0.715565 | 5.1:-48401560 | MS.gene010231:CDS |
| TGTCCTGTTAAGTGATACCG+GGG | 0.717824 | 5.1:-48402226 | MS.gene010231:CDS |
| TAGCTTCGGAATCTTGACTG+AGG | 0.723506 | 5.1:+48402128 | None:intergenic |
| ATATCTGAGATTGTCCCCTG+AGG | 0.748699 | 5.1:+48401325 | None:intergenic |
| CATCTGTGTGAGGATCAACA+AGG | 0.762493 | 5.1:+48401986 | None:intergenic |
| CAGTACACGCATATCTACCG+CGG | 0.778287 | 5.1:-48401700 | MS.gene010231:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAGAGATAAAAATA+TGG | + | chr5.1:48402295-48402314 | None:intergenic | 10.0% |
| !!! | TATTTTTATCTCTTTATTAT+AGG | - | chr5.1:48402295-48402314 | MS.gene010231:CDS | 10.0% |
| !! | TTTGTTAATTCAAATTACTT+TGG | - | chr5.1:48400024-48400043 | MS.gene010231:intron | 15.0% |
| !!! | AAATGTAATTCTAAAATCAA+GGG | - | chr5.1:48398865-48398884 | MS.gene010231:intron | 15.0% |
| !! | AAATACTCTTAATGCTTAAT+AGG | - | chr5.1:48402179-48402198 | MS.gene010231:CDS | 20.0% |
| !! | AATATCAACAAAGTCAATTA+AGG | + | chr5.1:48401486-48401505 | None:intergenic | 20.0% |
| !! | TTACAGTTCAAATTTATAGT+TGG | - | chr5.1:48398679-48398698 | MS.gene010231:intron | 20.0% |
| !!! | AAAAAGCTGTTTATGTTTTT+TGG | + | chr5.1:48398989-48399008 | None:intergenic | 20.0% |
| !!! | AAAAGCTGTTTATGTTTTTT+GGG | + | chr5.1:48398988-48399007 | None:intergenic | 20.0% |
| !!! | ATGGTAAATATAGATTTTGT+AGG | + | chr5.1:48397693-48397712 | None:intergenic | 20.0% |
| !!! | CAAATGTAATTCTAAAATCA+AGG | - | chr5.1:48398864-48398883 | MS.gene010231:intron | 20.0% |
| !!! | TGGTAAATATAGATTTTGTA+GGG | + | chr5.1:48397692-48397711 | None:intergenic | 20.0% |
| !!! | TTAATTGACTTTGTTGATAT+TGG | - | chr5.1:48401485-48401504 | MS.gene010231:CDS | 20.0% |
| !!! | TTTGTTTTTTTTTCTTGTCT+CGG | - | chr5.1:48401128-48401147 | MS.gene010231:intron | 20.0% |
| ! | AAATTGTCTTCATACCAAAT+TGG | + | chr5.1:48400686-48400705 | None:intergenic | 25.0% |
| ! | AACATATGATGTGTAATTCT+GGG | - | chr5.1:48399777-48399796 | MS.gene010231:intron | 25.0% |
| ! | AATTGTCTTCATACCAAATT+GGG | + | chr5.1:48400685-48400704 | None:intergenic | 25.0% |
| ! | ACATTTGAATCTTATCCTAT+AGG | + | chr5.1:48398851-48398870 | None:intergenic | 25.0% |
| ! | ACTATTGGAGAAAGTTATTT+AGG | + | chr5.1:48402101-48402120 | None:intergenic | 25.0% |
| ! | ACTTGAAATGAGAAAATACA+TGG | + | chr5.1:48401645-48401664 | None:intergenic | 25.0% |
| ! | AGTTATTATTAGAGACTAGT+TGG | - | chr5.1:48399060-48399079 | MS.gene010231:intron | 25.0% |
| ! | CATTTGAATCTTATCCTATA+GGG | + | chr5.1:48398850-48398869 | None:intergenic | 25.0% |
| ! | CTCTTTATTATAGGTTAAGT+GGG | - | chr5.1:48402304-48402323 | MS.gene010231:CDS | 25.0% |
| ! | TCAAAGAAATCATTGAATTC+TGG | + | chr5.1:48398718-48398737 | None:intergenic | 25.0% |
| ! | TCTCTTTATTATAGGTTAAG+TGG | - | chr5.1:48402303-48402322 | MS.gene010231:CDS | 25.0% |
| ! | TCTTAGAGAATATCAACTAT+TGG | + | chr5.1:48402116-48402135 | None:intergenic | 25.0% |
| ! | TCTTTGATAAGTATTAGTGT+TGG | - | chr5.1:48398731-48398750 | MS.gene010231:intron | 25.0% |
| ! | TTAATCAAGAACAAAAGTGA+TGG | + | chr5.1:48399392-48399411 | None:intergenic | 25.0% |
| ! | TTCTTTCTATTGATGGAAAA+TGG | + | chr5.1:48399148-48399167 | None:intergenic | 25.0% |
| ! | TTGTGAATTCTTTCTATTGA+TGG | + | chr5.1:48399155-48399174 | None:intergenic | 25.0% |
| !! | AATTTTTGTGTGATATTTGG+TGG | - | chr5.1:48400460-48400479 | MS.gene010231:intron | 25.0% |
| !! | AGACAATTTTATTAGCTCAT+TGG | - | chr5.1:48400697-48400716 | MS.gene010231:intron | 25.0% |
| !! | CACAATTTTTGTGTGATATT+TGG | - | chr5.1:48400457-48400476 | MS.gene010231:intron | 25.0% |
| !! | TTAGCTCATTGGATTTATTT+TGG | - | chr5.1:48400708-48400727 | MS.gene010231:intron | 25.0% |
| !! | TTTTTCTTTCTTCTTCATTC+TGG | - | chr5.1:48399296-48399315 | MS.gene010231:intron | 25.0% |
| !!! | TAAACTTTAGAATGTAGCTT+CGG | + | chr5.1:48397762-48397781 | None:intergenic | 25.0% |
| !!! | TGTATTTTCTCATTTCAAGT+TGG | - | chr5.1:48401645-48401664 | MS.gene010231:CDS | 25.0% |
| !!! | TTGGATATCATCATTGATTT+TGG | - | chr5.1:48401390-48401409 | MS.gene010231:CDS | 25.0% |
| AACACCTTAAGCCTATATAT+AGG | + | chr5.1:48399092-48399111 | None:intergenic | 30.0% | |
| AGTCTCTAATAATAACTGCA+AGG | + | chr5.1:48399057-48399076 | None:intergenic | 30.0% | |
| ATCGAAGAATCAGAATGAAA+CGG | + | chr5.1:48399555-48399574 | None:intergenic | 30.0% | |
| ATTGGAGAAAGTTATTTAGG+CGG | + | chr5.1:48402098-48402117 | None:intergenic | 30.0% | |
| CAAAATTCTTTGTGATCAAG+AGG | + | chr5.1:48398953-48398972 | None:intergenic | 30.0% | |
| CAACATATGATGTGTAATTC+TGG | - | chr5.1:48399776-48399795 | MS.gene010231:intron | 30.0% | |
| CATCATTCATCTTCTAATTG+TGG | + | chr5.1:48398788-48398807 | None:intergenic | 30.0% | |
| GAAGATTCTTCTTTCTTCAA+AGG | + | chr5.1:48398503-48398522 | None:intergenic | 30.0% | |
| GAATTTGTCATATAGCTTGA+AGG | - | chr5.1:48400772-48400791 | MS.gene010231:intron | 30.0% | |
| GATCAATCTCTCAACAATAT+AGG | + | chr5.1:48400199-48400218 | None:intergenic | 30.0% | |
| TGATACCATGTTATGAAACA+TGG | + | chr5.1:48399204-48399223 | None:intergenic | 30.0% | |
| TTATGGATATTGTGAAGACA+AGG | - | chr5.1:48400345-48400364 | MS.gene010231:intron | 30.0% | |
| TTCTTGCATGAATTCTTGAT+CGG | - | chr5.1:48399599-48399618 | MS.gene010231:intron | 30.0% | |
| TTCTTGTGTGTATACAGTTA+TGG | - | chr5.1:48400328-48400347 | MS.gene010231:intron | 30.0% | |
| ! | AAAGAAGCATACAGAAGAAT+TGG | + | chr5.1:48398904-48398923 | None:intergenic | 30.0% |
| ! | AAGAAGCATACAGAAGAATT+GGG | + | chr5.1:48398903-48398922 | None:intergenic | 30.0% |
| ! | GTACATACACTTTCTTCTTT+TGG | - | chr5.1:48398614-48398633 | MS.gene010231:intron | 30.0% |
| ! | TATAGCTTGAAGGCAATTTT+CGG | - | chr5.1:48400782-48400801 | MS.gene010231:intron | 30.0% |
| ! | TTTTTGTTCAAAACTCAGCT+GGG | - | chr5.1:48398276-48398295 | MS.gene010231:intron | 30.0% |
| !! | ACGTCTAGGATTTTTATTTG+GGG | + | chr5.1:48397616-48397635 | None:intergenic | 30.0% |
| !! | CACGTCTAGGATTTTTATTT+GGG | + | chr5.1:48397617-48397636 | None:intergenic | 30.0% |
| !!! | GAATTGGTTTGATTTTGTAG+TGG | - | chr5.1:48398415-48398434 | MS.gene010231:intron | 30.0% |
| !!! | TCATTTTTTTTTCTGCTTGC+TGG | - | chr5.1:48400881-48400900 | MS.gene010231:intron | 30.0% |
| AAAGTTTACTACTTCCCACA+AGG | - | chr5.1:48397774-48397793 | MS.gene010231:intron | 35.0% | |
| AAATCAAACCAATTCGCTCT+CGG | + | chr5.1:48398410-48398429 | None:intergenic | 35.0% | |
| AAATTGCAACATAGAACGCA+AGG | + | chr5.1:48399664-48399683 | None:intergenic | 35.0% | |
| AAGAATTGGTTGCTGATGTT+TGG | - | chr5.1:48400268-48400287 | MS.gene010231:intron | 35.0% | |
| AAGGAGGATAACGATGAATA+AGG | + | chr5.1:48397836-48397855 | None:intergenic | 35.0% | |
| AAGGTTCTCTATGATGTGTT+TGG | - | chr5.1:48399825-48399844 | MS.gene010231:intron | 35.0% | |
| AATCGCAAACCCTAAGAATT+GGG | + | chr5.1:48399485-48399504 | None:intergenic | 35.0% | |
| ACACAATCTGATTGCAATAG+TGG | - | chr5.1:48398035-48398054 | MS.gene010231:intron | 35.0% | |
| ACCAACATGTTGAAAACCAA+TGG | + | chr5.1:48400970-48400989 | None:intergenic | 35.0% | |
| ACTACTCATAATGCACTCAA+TGG | - | chr5.1:48400111-48400130 | MS.gene010231:intron | 35.0% | |
| AGAATCAGAATGAAACGGAA+AGG | + | chr5.1:48399550-48399569 | None:intergenic | 35.0% | |
| AGATATTCGTTGGAATATGC+CGG | - | chr5.1:48398300-48398319 | MS.gene010231:intron | 35.0% | |
| AGATGTCCAATTAACCTTCA+TGG | + | chr5.1:48398462-48398481 | None:intergenic | 35.0% | |
| AGCAACCAATTCTTCACAAA+AGG | + | chr5.1:48400262-48400281 | None:intergenic | 35.0% | |
| AGGAGGATAACGATGAATAA+GGG | + | chr5.1:48397835-48397854 | None:intergenic | 35.0% | |
| AGTGCCTATATATAGGCTTA+AGG | - | chr5.1:48399085-48399104 | MS.gene010231:intron | 35.0% | |
| ATCATTTCCCCCAATTCTTA+GGG | - | chr5.1:48399473-48399492 | MS.gene010231:intron | 35.0% | |
| ATGAAGGTTAATTGGACATC+TGG | - | chr5.1:48398461-48398480 | MS.gene010231:intron | 35.0% | |
| ATGATGCCATGAAGGTTAAT+TGG | - | chr5.1:48398453-48398472 | MS.gene010231:intron | 35.0% | |
| ATTAACGACTGAAATGATGC+CGG | + | chr5.1:48397865-48397884 | None:intergenic | 35.0% | |
| CAAACAAGTTTGTGCACATA+AGG | + | chr5.1:48400933-48400952 | None:intergenic | 35.0% | |
| CTATGTTGCAATTTGACTCT+TGG | - | chr5.1:48399670-48399689 | MS.gene010231:intron | 35.0% | |
| CTATTTCGAATGACTGATGT+TGG | - | chr5.1:48402262-48402281 | MS.gene010231:CDS | 35.0% | |
| CTCATTCTAATGTCCCTAAT+TGG | - | chr5.1:48398579-48398598 | MS.gene010231:intron | 35.0% | |
| CTGGAAGTTATTTGCTTGTT+TGG | - | chr5.1:48400900-48400919 | MS.gene010231:intron | 35.0% | |
| CTTCCTTGGATTTGATGTAT+TGG | - | chr5.1:48400434-48400453 | MS.gene010231:intron | 35.0% | |
| GAAAATACATGGAAAGATGC+CGG | + | chr5.1:48401634-48401653 | None:intergenic | 35.0% | |
| GAAAATACTACATCTGTGTG+AGG | + | chr5.1:48397900-48397919 | None:intergenic | 35.0% | |
| GAAGCTTCTCTCTTACAATA+TGG | + | chr5.1:48401892-48401911 | None:intergenic | 35.0% | |
| GACAAGAAAAACCAAATGCA+AGG | + | chr5.1:48401271-48401290 | None:intergenic | 35.0% | |
| GATGTGTAATTCTGGGTATA+AGG | - | chr5.1:48399784-48399803 | MS.gene010231:intron | 35.0% | |
| GCTTCATGGTAAAAGTGATT+TGG | + | chr5.1:48401975-48401994 | None:intergenic | 35.0% | |
| GTATATACAGTTCAGCTTTG+TGG | + | chr5.1:48397586-48397605 | None:intergenic | 35.0% | |
| GTTGAGAGATTGATCAGAAT+TGG | - | chr5.1:48400204-48400223 | MS.gene010231:intron | 35.0% | |
| GTTGGTTAGTGCCTATATAT+AGG | - | chr5.1:48399078-48399097 | MS.gene010231:intron | 35.0% | |
| TAGGCGGTCAATGATAAAAA+CGG | + | chr5.1:48402082-48402101 | None:intergenic | 35.0% | |
| TAGTGCAAAACCAATTCAAG+AGG | + | chr5.1:48400095-48400114 | None:intergenic | 35.0% | |
| TATAAGGATCACTGGATGTT+TGG | - | chr5.1:48399800-48399819 | MS.gene010231:intron | 35.0% | |
| TCATCTCTCAAGTTAAGCAA+AGG | - | chr5.1:48400653-48400672 | MS.gene010231:intron | 35.0% | |
| TGAACAAACTTCACACCAAA+AGG | + | chr5.1:48401212-48401231 | None:intergenic | 35.0% | |
| TGTATGATGTTGCTGAATTC+TGG | - | chr5.1:48399971-48399990 | MS.gene010231:intron | 35.0% | |
| TTGTGTGAGAATCTTGACAA+AGG | + | chr5.1:48398021-48398040 | None:intergenic | 35.0% | |
| TTTCTTAGCCGATGTATTTC+CGG | - | chr5.1:48401612-48401631 | MS.gene010231:CDS | 35.0% | |
| ! | AGATTTTGTAGGGAATGCTT+CGG | + | chr5.1:48397682-48397701 | None:intergenic | 35.0% |
| ! | CAAAGAATTTTGCAGCATTG+AGG | - | chr5.1:48398961-48398980 | MS.gene010231:intron | 35.0% |
| ! | GATATCCAAAAAGAAGTGCA+AGG | + | chr5.1:48401379-48401398 | None:intergenic | 35.0% |
| ! | GTTTTTGTTCAAAACTCAGC+TGG | - | chr5.1:48398275-48398294 | MS.gene010231:intron | 35.0% |
| ! | TCAAGTTCTAGTGTAAGTGA+AGG | - | chr5.1:48400832-48400851 | MS.gene010231:intron | 35.0% |
| ! | TGCAAATGTTGCTTGTGATT+TGG | - | chr5.1:48400744-48400763 | MS.gene010231:intron | 35.0% |
| ! | TTCGTTTGTTGGTGTGTTTA+TGG | - | chr5.1:48400527-48400546 | MS.gene010231:intron | 35.0% |
| ! | TTTGGAATCTTCGAGATTTC+AGG | + | chr5.1:48397530-48397549 | None:intergenic | 35.0% |
| !! | ATTTCTGCCAGATTTTGGTA+GGG | + | chr5.1:48397716-48397735 | None:intergenic | 35.0% |
| !! | CACTTTTATCTTTGGAAGCT+TGG | - | chr5.1:48401169-48401188 | MS.gene010231:intron | 35.0% |
| !! | CAGAATTGGTTCTACAAGTT+TGG | - | chr5.1:48400218-48400237 | MS.gene010231:intron | 35.0% |
| !! | CGTCTAGGATTTTTATTTGG+GGG | + | chr5.1:48397615-48397634 | None:intergenic | 35.0% |
| !! | GAGGACATCACTTTTATCTT+TGG | - | chr5.1:48401161-48401180 | MS.gene010231:intron | 35.0% |
| !! | GCACGTCTAGGATTTTTATT+TGG | + | chr5.1:48397618-48397637 | None:intergenic | 35.0% |
| !! | GTCTAGGATTTTTATTTGGG+GGG | + | chr5.1:48397614-48397633 | None:intergenic | 35.0% |
| !! | TCTAGGATTTTTATTTGGGG+GGG | + | chr5.1:48397613-48397632 | None:intergenic | 35.0% |
| !! | TTGTTGATATTGGCTTCTAC+CGG | - | chr5.1:48401495-48401514 | MS.gene010231:CDS | 35.0% |
| !!! | ACACATTGTTGAGTTGGTTT+TGG | - | chr5.1:48400053-48400072 | MS.gene010231:intron | 35.0% |
| !!! | CACTTTTATCTTTGGAACCT+TGG | - | chr5.1:48401313-48401332 | MS.gene010231:CDS | 35.0% |
| !!! | GCATTTGGTTTTTCTTGTCT+CGG | - | chr5.1:48401272-48401291 | MS.gene010231:intron | 35.0% |
| !!! | TGCTATTTTGTTGAAGCCAT+TGG | - | chr5.1:48400951-48400970 | MS.gene010231:intron | 35.0% |
| !!! | TTGTTGAGTTGGTTTTGGTA+TGG | - | chr5.1:48400058-48400077 | MS.gene010231:intron | 35.0% |
| !!! | TTTTTTTTCTTGTCTCGGCT+TGG | - | chr5.1:48401133-48401152 | MS.gene010231:intron | 35.0% |
| AAAATCTGGCAGAAATGTGC+TGG | - | chr5.1:48397720-48397739 | MS.gene010231:intron | 40.0% | |
| AACATGGCATCCATTGATGA+AGG | + | chr5.1:48399188-48399207 | None:intergenic | 40.0% | |
| AAGGCAAAGGCTTATCTTTG+TGG | - | chr5.1:48400851-48400870 | MS.gene010231:intron | 40.0% | |
| ACAACTCAAGGTTGAACCAA+TGG | + | chr5.1:48401556-48401575 | None:intergenic | 40.0% | |
| ACATGGCTATGCATCTCTAT+TGG | - | chr5.1:48401099-48401118 | MS.gene010231:intron | 40.0% | |
| ACATGGTATCAGAGCAAGAT+TGG | - | chr5.1:48399213-48399232 | MS.gene010231:intron | 40.0% | |
| ACCATAGAAAACCATCCATG+TGG | + | chr5.1:48401066-48401085 | None:intergenic | 40.0% | |
| ACTCATAATGCACTCAATGG+AGG | - | chr5.1:48400114-48400133 | MS.gene010231:intron | 40.0% | |
| ACTTTCTCGAGAAAATGCAG+CGG | + | chr5.1:48399259-48399278 | None:intergenic | 40.0% | |
| AGAATTGGGGGAAATGATGA+TGG | + | chr5.1:48399471-48399490 | None:intergenic | 40.0% | |
| AGAGTTGTATGAAGCTTCCT+TGG | - | chr5.1:48400420-48400439 | MS.gene010231:intron | 40.0% | |
| AGCACAAGACAAGAAGAACA+AGG | + | chr5.1:48401420-48401439 | None:intergenic | 40.0% | |
| AGCTGAAACCATGGTACTTT+CGG | + | chr5.1:48399031-48399050 | None:intergenic | 40.0% | |
| AGGACTTTCAACAAACACCT+TGG | + | chr5.1:48399870-48399889 | None:intergenic | 40.0% | |
| AGGCGGTCAATGATAAAAAC+GGG | + | chr5.1:48402081-48402100 | None:intergenic | 40.0% | |
| ATCGCAAACCCTAAGAATTG+GGG | + | chr5.1:48399484-48399503 | None:intergenic | 40.0% | |
| ATGACATTGTTTCAGCCTCA+GGG | - | chr5.1:48398533-48398552 | MS.gene010231:intron | 40.0% | |
| ATGCAGCGGAAAATTGTTCA+AGG | + | chr5.1:48399245-48399264 | None:intergenic | 40.0% | |
| ATGGTTTGAATGCATCCACA+TGG | - | chr5.1:48401048-48401067 | MS.gene010231:intron | 40.0% | |
| ATTCTGGGTATAAGGATCAC+TGG | - | chr5.1:48399792-48399811 | MS.gene010231:intron | 40.0% | |
| ATTCTTGCTGCCTCTTGAAT+TGG | - | chr5.1:48400082-48400101 | MS.gene010231:intron | 40.0% | |
| CATCATTTCCCCCAATTCTT+AGG | - | chr5.1:48399472-48399491 | MS.gene010231:intron | 40.0% | |
| CATGGTACTTTCGGAAAACA+AGG | + | chr5.1:48399022-48399041 | None:intergenic | 40.0% | |
| CCATGAAAGAACCAAGCATT+TGG | - | chr5.1:48401856-48401875 | MS.gene010231:CDS | 40.0% | |
| CTTATTGCATACTGCTTCCA+AGG | - | chr5.1:48399850-48399869 | MS.gene010231:intron | 40.0% | |
| GAAAGATGCCGGAAATACAT+CGG | + | chr5.1:48401623-48401642 | None:intergenic | 40.0% | |
| GAAATCTGCAAGTTGCTCTT+TGG | + | chr5.1:48401948-48401967 | None:intergenic | 40.0% | |
| GAAGCTTAGGACATTGAATG+TGG | + | chr5.1:48401781-48401800 | None:intergenic | 40.0% | |
| GAATCGCAAACCCTAAGAAT+TGG | + | chr5.1:48399486-48399505 | None:intergenic | 40.0% | |
| GAATCGTCCAAGTTAAGCTT+CGG | + | chr5.1:48398104-48398123 | None:intergenic | 40.0% | |
| GAGTTCTTGAGAACTCTTGA+TGG | - | chr5.1:48401448-48401467 | MS.gene010231:CDS | 40.0% | |
| GATCACTGGATGTTTGGTAA+AGG | - | chr5.1:48399806-48399825 | MS.gene010231:intron | 40.0% | |
| GGATATTGTGAAGACAAGGT+TGG | - | chr5.1:48400349-48400368 | MS.gene010231:intron | 40.0% | |
| GGATGCCATGTTTCATAACA+TGG | - | chr5.1:48399196-48399215 | MS.gene010231:intron | 40.0% | |
| GTGCCAATACATCAAATCCA+AGG | + | chr5.1:48400440-48400459 | None:intergenic | 40.0% | |
| TACAGAAGAATTGGGTGTCA+TGG | + | chr5.1:48398895-48398914 | None:intergenic | 40.0% | |
| TCTAGTGTAAGTGAAGGCAA+AGG | - | chr5.1:48400838-48400857 | MS.gene010231:intron | 40.0% | |
| TCTGATTGCAATAGTGGCTA+TGG | - | chr5.1:48398041-48398060 | MS.gene010231:intron | 40.0% | |
| TCTGTCCTGTTAAGTGATAC+CGG | - | chr5.1:48397645-48397664 | MS.gene010231:intron | 40.0% | |
| TGAAAACTCTCGTTGCTTCA+TGG | + | chr5.1:48401989-48402008 | None:intergenic | 40.0% | |
| TGAATAAGTTCAACCTGCCA+AGG | + | chr5.1:48397563-48397582 | None:intergenic | 40.0% | |
| TGATTGTCACAGAAGAGAAC+AGG | + | chr5.1:48401803-48401822 | None:intergenic | 40.0% | |
| TGGTTCTTTCATGGAACACA+GGG | + | chr5.1:48401850-48401869 | None:intergenic | 40.0% | |
| TGGTTTGAAGACACATCACA+TGG | - | chr5.1:48401082-48401101 | MS.gene010231:intron | 40.0% | |
| TGTATTATCCGAGAGCGAAT+TGG | - | chr5.1:48398399-48398418 | MS.gene010231:intron | 40.0% | |
| TGTGGATGCATTCAAACCAT+AGG | + | chr5.1:48401048-48401067 | None:intergenic | 40.0% | |
| TTACCATCCCTACCAAAATC+TGG | - | chr5.1:48397706-48397725 | MS.gene010231:intron | 40.0% | |
| TTCCAAACTGTGTCAATCCT+TGG | - | chr5.1:48397543-48397562 | MS.gene010231:CDS | 40.0% | |
| TTGAACACCTTCCAACTTGA+GGG | - | chr5.1:48401677-48401696 | MS.gene010231:CDS | 40.0% | |
| TTGAACCAATATAGCCAGCA+AGG | + | chr5.1:48400816-48400835 | None:intergenic | 40.0% | |
| TTGGAATATGCCGGAAAAGT+GGG | - | chr5.1:48398309-48398328 | MS.gene010231:intron | 40.0% | |
| TTGGTGTGTTTATGGAGGTA+CGG | - | chr5.1:48400535-48400554 | MS.gene010231:intron | 40.0% | |
| TTGTTGAAAGTCCTCACTGA+AGG | - | chr5.1:48399876-48399895 | MS.gene010231:intron | 40.0% | |
| TTTCGGAAAACAAGGTTCGA+TGG | + | chr5.1:48399014-48399033 | None:intergenic | 40.0% | |
| TTTGAACACCTTCCAACTTG+AGG | - | chr5.1:48401676-48401695 | MS.gene010231:CDS | 40.0% | |
| TTTGAATGCATCCACATGGA+TGG | - | chr5.1:48401052-48401071 | MS.gene010231:intron | 40.0% | |
| TTTGGATTCTGCGAGATTTC+AGG | + | chr5.1:48402335-48402354 | None:intergenic | 40.0% | |
| ! | AAGAGACACCTTTTCAGTAG+GGG | - | chr5.1:48398203-48398222 | MS.gene010231:intron | 40.0% |
| ! | ACAGAAGAATTGGGTGTCAT+GGG | + | chr5.1:48398894-48398913 | None:intergenic | 40.0% |
| ! | ACATGTTCTAAGTGACCTTG+TGG | + | chr5.1:48397792-48397811 | None:intergenic | 40.0% |
| ! | AGCACATTTCTGCCAGATTT+TGG | + | chr5.1:48397721-48397740 | None:intergenic | 40.0% |
| ! | ATTGGTTCAACCTTGAGTTG+TGG | - | chr5.1:48401555-48401574 | MS.gene010231:CDS | 40.0% |
| ! | ATTTGGTGGCTTCAGATTTG+TGG | - | chr5.1:48400474-48400493 | MS.gene010231:intron | 40.0% |
| ! | CAAGAGACACCTTTTCAGTA+GGG | - | chr5.1:48398202-48398221 | MS.gene010231:intron | 40.0% |
| ! | CATGGCCTTTTGTGAAGAAT+TGG | - | chr5.1:48400254-48400273 | MS.gene010231:intron | 40.0% |
| ! | CATGTTCTAAGTGACCTTGT+GGG | + | chr5.1:48397791-48397810 | None:intergenic | 40.0% |
| ! | CCAAATGCTTGGTTCTTTCA+TGG | + | chr5.1:48401859-48401878 | None:intergenic | 40.0% |
| ! | CTCTTCCTTGCACTTCTTTT+TGG | - | chr5.1:48401371-48401390 | MS.gene010231:CDS | 40.0% |
| ! | GCTTTTCTCTCCTTCATCAA+TGG | - | chr5.1:48399175-48399194 | MS.gene010231:intron | 40.0% |
| ! | GTTTGTTGGTGTGTTTATGG+AGG | - | chr5.1:48400530-48400549 | MS.gene010231:intron | 40.0% |
| ! | TCCACATGGATGGTTTTCTA+TGG | - | chr5.1:48401062-48401081 | MS.gene010231:intron | 40.0% |
| ! | TTGGTTCTTTCATGGAACAC+AGG | + | chr5.1:48401851-48401870 | None:intergenic | 40.0% |
| !! | CATTTCTGCCAGATTTTGGT+AGG | + | chr5.1:48397717-48397736 | None:intergenic | 40.0% |
| !! | CTAGGATTTTTATTTGGGGG+GGG | + | chr5.1:48397612-48397631 | None:intergenic | 40.0% |
| !! | GTTTTCCTTGCTGGCTATAT+TGG | - | chr5.1:48400808-48400827 | MS.gene010231:intron | 40.0% |
| !! | TGTATAGCTTTGTGCCCTAT+AGG | - | chr5.1:48398833-48398852 | MS.gene010231:intron | 40.0% |
| !! | TGTTGTTGATGATGCCATGA+AGG | - | chr5.1:48398445-48398464 | MS.gene010231:intron | 40.0% |
| !! | TTGTTGCTTCATGGTCCTTT+TGG | - | chr5.1:48401194-48401213 | MS.gene010231:intron | 40.0% |
| !! | TTTGGTGTTGCTTACTGACA+TGG | - | chr5.1:48400236-48400255 | MS.gene010231:intron | 40.0% |
| !!! | AGCTTGGTTTTGTTGCTTCA+TGG | - | chr5.1:48401185-48401204 | MS.gene010231:intron | 40.0% |
| !!! | CTTGTTTTCCGAAAGTACCA+TGG | - | chr5.1:48399020-48399039 | MS.gene010231:intron | 40.0% |
| !!! | GAGGGCATCACTTTTATCTT+TGG | - | chr5.1:48401305-48401324 | MS.gene010231:CDS | 40.0% |
| !!! | GCCATTGGTTTTCAACATGT+TGG | - | chr5.1:48400966-48400985 | MS.gene010231:intron | 40.0% |
| !!! | TTGCTTGGAAGCATTGGTTT+TGG | - | chr5.1:48401022-48401041 | MS.gene010231:intron | 40.0% |
| AAACTGTGTCAATCCTTGGC+AGG | - | chr5.1:48397547-48397566 | MS.gene010231:CDS | 45.0% | |
| AACAACAAGAAACTCGTCGC+TGG | - | chr5.1:48398242-48398261 | MS.gene010231:intron | 45.0% | |
| AAGCAAGTCCAATGCAATGC+TGG | + | chr5.1:48399930-48399949 | None:intergenic | 45.0% | |
| AAGGGTGATGATTGTGTGAG+CGG | + | chr5.1:48397817-48397836 | None:intergenic | 45.0% | |
| AAGTCCATCCCCTACTGAAA+AGG | + | chr5.1:48398214-48398233 | None:intergenic | 45.0% | |
| AAGTGGGAAGGTAACAGAGA+AGG | - | chr5.1:48398325-48398344 | MS.gene010231:intron | 45.0% | |
| AATATGCCGGAAAAGTGGGA+AGG | - | chr5.1:48398313-48398332 | MS.gene010231:intron | 45.0% | |
| AGGGTTGGAAGCTATGTGAA+TGG | + | chr5.1:48401831-48401850 | None:intergenic | 45.0% | |
| AGGTTGAACCAATGGAAGGA+AGG | + | chr5.1:48401548-48401567 | None:intergenic | 45.0% | |
| ATCCAAACCGTGTCAATCCT+TGG | - | chr5.1:48402348-48402367 | MS.gene010231:CDS | 45.0% | |
| ATCTGCAAGTTGCTCTTTGG+AGG | + | chr5.1:48401945-48401964 | None:intergenic | 45.0% | |
| ATTGTAGCCATCCTCGTCTT+CGG | + | chr5.1:48397991-48398010 | None:intergenic | 45.0% | |
| CAAGAAGCAACCACAACTCA+AGG | + | chr5.1:48401568-48401587 | None:intergenic | 45.0% | |
| CACACCAACAAACGAATTCG+AGG | + | chr5.1:48400523-48400542 | None:intergenic | 45.0% | |
| CAGAAGAGAACAGGAAGCTT+AGG | + | chr5.1:48401794-48401813 | None:intergenic | 45.0% | |
| CAGCGGAAAATTGTTCAAGG+TGG | + | chr5.1:48399242-48399261 | None:intergenic | 45.0% | |
| CATCTGTGTGAGGATCAACA+AGG | + | chr5.1:48397890-48397909 | None:intergenic | 45.0% | |
| CATGCTGTTCTTGGATTGCT+TGG | - | chr5.1:48401007-48401026 | MS.gene010231:intron | 45.0% | |
| CCATAGTCAACAATGGAAGG+AGG | + | chr5.1:48401243-48401262 | None:intergenic | 45.0% | |
| CCATAGTCTACAATGGAAGG+AGG | + | chr5.1:48401351-48401370 | None:intergenic | 45.0% | |
| CCTCCTTCCATTGTAGACTA+TGG | - | chr5.1:48401348-48401367 | MS.gene010231:CDS | 45.0% | |
| CGTTATCCTCCTTCCATTTC+CGG | - | chr5.1:48397843-48397862 | MS.gene010231:intron | 45.0% | |
| CTATGGCTCTTCCTTGCATT+TGG | - | chr5.1:48401257-48401276 | MS.gene010231:intron | 45.0% | |
| CTCAAGGTTGAACCAATGGA+AGG | + | chr5.1:48401552-48401571 | None:intergenic | 45.0% | |
| CTCAATGGAGGTTTCATTGC+TGG | - | chr5.1:48400126-48400145 | MS.gene010231:intron | 45.0% | |
| CTGTCCTGTTAAGTGATACC+GGG | - | chr5.1:48397646-48397665 | MS.gene010231:intron | 45.0% | |
| GAAATGATGCCGGAAATGGA+AGG | + | chr5.1:48397855-48397874 | None:intergenic | 45.0% | |
| GACTGAAATGATGCCGGAAA+TGG | + | chr5.1:48397859-48397878 | None:intergenic | 45.0% | |
| GAGCCATAGTCAACAATGGA+AGG | + | chr5.1:48401246-48401265 | None:intergenic | 45.0% | |
| GAGCCATAGTCTACAATGGA+AGG | + | chr5.1:48401354-48401373 | None:intergenic | 45.0% | |
| GAGTTGTGGTTGCTTCTTGT+TGG | - | chr5.1:48401569-48401588 | MS.gene010231:CDS | 45.0% | |
| GATCTTGCCGAAGCTTAACT+TGG | - | chr5.1:48398094-48398113 | MS.gene010231:intron | 45.0% | |
| GATGACATTGTTTCAGCCTC+AGG | - | chr5.1:48398532-48398551 | MS.gene010231:intron | 45.0% | |
| GCAAAGGTTGTGACCCAATT+TGG | - | chr5.1:48400669-48400688 | MS.gene010231:intron | 45.0% | |
| GCAAGATCAAGTCAACGCAA+GGG | + | chr5.1:48398082-48398101 | None:intergenic | 45.0% | |
| GCACGAATTCTGCCAATAGT+AGG | + | chr5.1:48400602-48400621 | None:intergenic | 45.0% | |
| GCAGTCAATGTCCAAATGCT+TGG | + | chr5.1:48401870-48401889 | None:intergenic | 45.0% | |
| GGAAGAGCCATAGTCAACAA+TGG | + | chr5.1:48401250-48401269 | None:intergenic | 45.0% | |
| GGAAGAGCCATAGTCTACAA+TGG | + | chr5.1:48401358-48401377 | None:intergenic | 45.0% | |
| GGAATTGGCGGTGAAAAACA+TGG | - | chr5.1:48398364-48398383 | MS.gene010231:intron | 45.0% | |
| GGAGGTCATATGTAAGACCA+AGG | + | chr5.1:48401333-48401352 | None:intergenic | 45.0% | |
| GGGGACTATTAGAGACTAGT+TGG | - | chr5.1:48401698-48401717 | MS.gene010231:CDS | 45.0% | |
| GTAAGAGAGAAGCTTCATGC+AGG | - | chr5.1:48401896-48401915 | MS.gene010231:CDS | 45.0% | |
| GTTGGAATATGCCGGAAAAG+TGG | - | chr5.1:48398308-48398327 | MS.gene010231:intron | 45.0% | |
| TACCAATCTGTCCTTCAGTG+AGG | + | chr5.1:48399890-48399909 | None:intergenic | 45.0% | |
| TAGCTTCGGAATCTTGACTG+AGG | + | chr5.1:48397748-48397767 | None:intergenic | 45.0% | |
| TCACGCACACATTGTTGAGT+TGG | - | chr5.1:48400047-48400066 | MS.gene010231:intron | 45.0% | |
| TCAGCCTCGAATTCGTTTGT+TGG | - | chr5.1:48400516-48400535 | MS.gene010231:intron | 45.0% | |
| TCAGCTGGGAAGATATTCGT+TGG | - | chr5.1:48398290-48398309 | MS.gene010231:intron | 45.0% | |
| TCGCAAACCCTAAGAATTGG+GGG | + | chr5.1:48399483-48399502 | None:intergenic | 45.0% | |
| TCTAATAGTCCCCCTCAAGT+TGG | + | chr5.1:48401691-48401710 | None:intergenic | 45.0% | |
| TCTCTGCTGCAACCTACTAT+TGG | - | chr5.1:48400587-48400606 | MS.gene010231:intron | 45.0% | |
| TCTTTCATGGAACACAGGGT+TGG | + | chr5.1:48401846-48401865 | None:intergenic | 45.0% | |
| TGAACACCTTCCAACTTGAG+GGG | - | chr5.1:48401678-48401697 | MS.gene010231:CDS | 45.0% | |
| TGACATTGTTTCAGCCTCAG+GGG | - | chr5.1:48398534-48398553 | MS.gene010231:intron | 45.0% | |
| TGCCAAGGATTGACACAGTT+TGG | + | chr5.1:48397548-48397567 | None:intergenic | 45.0% | |
| TGTCCTGTTAAGTGATACCG+GGG | - | chr5.1:48397647-48397666 | MS.gene010231:intron | 45.0% | |
| TTGATGCTCCTTCCTTCCAT+TGG | - | chr5.1:48401537-48401556 | MS.gene010231:CDS | 45.0% | |
| ! | AGAAGAATTGGGTGTCATGG+GGG | + | chr5.1:48398892-48398911 | None:intergenic | 45.0% |
| ! | AGTTGCTCTTTGGAGGAAAC+TGG | + | chr5.1:48401938-48401957 | None:intergenic | 45.0% |
| ! | ATATCTGAGATTGTCCCCTG+AGG | + | chr5.1:48398551-48398570 | None:intergenic | 45.0% |
| ! | CAGAAGAATTGGGTGTCATG+GGG | + | chr5.1:48398893-48398912 | None:intergenic | 45.0% |
| ! | CCAAGAGACACCTTTTCAGT+AGG | - | chr5.1:48398201-48398220 | MS.gene010231:intron | 45.0% |
| ! | CCTCCTTCCATTGTTGACTA+TGG | - | chr5.1:48401240-48401259 | MS.gene010231:intron | 45.0% |
| ! | CTTGGATTGCTTGGAAGCAT+TGG | - | chr5.1:48401016-48401035 | MS.gene010231:intron | 45.0% |
| ! | GCTTGAAGGCAATTTTCGGT+TGG | - | chr5.1:48400786-48400805 | MS.gene010231:intron | 45.0% |
| ! | GTTGCTCTTTGGAGGAAACT+GGG | + | chr5.1:48401937-48401956 | None:intergenic | 45.0% |
| ! | TGGTTTTTCTTGTCTCGGCT+CGG | - | chr5.1:48401277-48401296 | MS.gene010231:intron | 45.0% |
| !! | CAAGAGGTTGTGTTGCTTCT+TGG | + | chr5.1:48398937-48398956 | None:intergenic | 45.0% |
| !! | CCTACTGAAAAGGTGTCTCT+TGG | + | chr5.1:48398204-48398223 | None:intergenic | 45.0% |
| !! | CTGTTACCTTCCCACTTTTC+CGG | + | chr5.1:48398322-48398341 | None:intergenic | 45.0% |
| !! | GAAGCGTGTTGATTGAGATG+TGG | - | chr5.1:48400383-48400402 | MS.gene010231:intron | 45.0% |
| !! | GACAAGGTTGGTCTCTTCTT+TGG | - | chr5.1:48400361-48400380 | MS.gene010231:intron | 45.0% |
| !!! | GAAGCATTGGTTTTGGCCTA+TGG | - | chr5.1:48401029-48401048 | MS.gene010231:intron | 45.0% |
| !!! | TTTCGGTTGGTTTTCCTTGC+TGG | - | chr5.1:48400799-48400818 | MS.gene010231:intron | 45.0% |
| ACCTGAAGCATGCGCCAATT+AGG | + | chr5.1:48398596-48398615 | None:intergenic | 50.0% | |
| ACTTCTCCTCACTCCCGTAA+CGG | - | chr5.1:48397923-48397942 | MS.gene010231:intron | 50.0% | |
| AGAGAAGGCGGTTATGGATG+CGG | - | chr5.1:48398340-48398359 | MS.gene010231:intron | 50.0% | |
| AGTCCAATGCAATGCTGGAG+TGG | + | chr5.1:48399925-48399944 | None:intergenic | 50.0% | |
| ATGATGCCGGAAATGGAAGG+AGG | + | chr5.1:48397852-48397871 | None:intergenic | 50.0% | |
| CAGCAGAGAGTTGTACAACC+AGG | + | chr5.1:48400576-48400595 | None:intergenic | 50.0% | |
| CAGTACACGCATATCTACCG+CGG | - | chr5.1:48398173-48398192 | MS.gene010231:intron | 50.0% | |
| CCTGAAGCATGCGCCAATTA+GGG | + | chr5.1:48398595-48398614 | None:intergenic | 50.0% | |
| CTCTCCGTCACTGACATTCA+TGG | - | chr5.1:48398140-48398159 | MS.gene010231:intron | 50.0% | |
| CTGGAGGAGCTTCTTGTTCA+TGG | + | chr5.1:48397959-48397978 | None:intergenic | 50.0% | |
| GAACACCTTCCAACTTGAGG+GGG | - | chr5.1:48401679-48401698 | MS.gene010231:CDS | 50.0% | |
| GAGCTTCTTGTTCATGGCCA+TGG | + | chr5.1:48397953-48397972 | None:intergenic | 50.0% | |
| GCAAGGTTGAGCTGAAACCA+TGG | + | chr5.1:48399040-48399059 | None:intergenic | 50.0% | |
| GGCAAGATCAAGTCAACGCA+AGG | + | chr5.1:48398083-48398102 | None:intergenic | 50.0% | |
| GGTAACAGAGAAGGCGGTTA+TGG | - | chr5.1:48398334-48398353 | MS.gene010231:intron | 50.0% | |
| GGTGTCTCTTGGATTTACCG+CGG | + | chr5.1:48398193-48398212 | None:intergenic | 50.0% | |
| GGTTATGGATGCGGTGGAAT+TGG | - | chr5.1:48398349-48398368 | MS.gene010231:intron | 50.0% | |
| GTCCTCACTGAAGGACAGAT+TGG | - | chr5.1:48399885-48399904 | MS.gene010231:intron | 50.0% | |
| GTTCCACTCCAGCATTGCAT+TGG | - | chr5.1:48399919-48399938 | MS.gene010231:intron | 50.0% | |
| TACGGGAGTGAGGAGAAGTT+TGG | + | chr5.1:48397922-48397941 | None:intergenic | 50.0% | |
| TATGCGTGTACTGCCAGACT+CGG | + | chr5.1:48398166-48398185 | None:intergenic | 50.0% | |
| TATGGATGCGGTGGAATTGG+CGG | - | chr5.1:48398352-48398371 | MS.gene010231:intron | 50.0% | |
| TCGGCCATGAATGTCAGTGA+CGG | + | chr5.1:48398147-48398166 | None:intergenic | 50.0% | |
| TGAACAAGAAGCTCCTCCAG+AGG | - | chr5.1:48397959-48397978 | MS.gene010231:intron | 50.0% | |
| TGCCAAGGATTGACACGGTT+TGG | + | chr5.1:48402353-48402372 | None:intergenic | 50.0% | |
| TGGAGAGAACGAAGTTGCGA+TGG | + | chr5.1:48399451-48399470 | None:intergenic | 50.0% | |
| TGGGAAGGTAACAGAGAAGG+CGG | - | chr5.1:48398328-48398347 | MS.gene010231:intron | 50.0% | |
| ! | GACACCTTTTCAGTAGGGGA+TGG | - | chr5.1:48398207-48398226 | MS.gene010231:intron | 50.0% |
| ! | GAGCTCTAGCATGCTGTTCT+TGG | - | chr5.1:48400998-48401017 | MS.gene010231:intron | 50.0% |
| ! | GTGTGTTTATGGAGGTACGG+AGG | - | chr5.1:48400538-48400557 | MS.gene010231:intron | 50.0% |
| ! | GTTTATGGAGGTACGGAGGA+TGG | - | chr5.1:48400542-48400561 | MS.gene010231:intron | 50.0% |
| !! | ATAGTCCCCCTCAAGTTGGA+AGG | + | chr5.1:48401687-48401706 | None:intergenic | 50.0% |
| !! | CTGCCAGATTTTGGTAGGGA+TGG | + | chr5.1:48397712-48397731 | None:intergenic | 50.0% |
| !! | TTCTTGTCTCGGCTTGGCAT+AGG | - | chr5.1:48401139-48401158 | MS.gene010231:intron | 50.0% |
| ACAGAGCTCTCAGCACGTCT+AGG | + | chr5.1:48397630-48397649 | None:intergenic | 55.0% | |
| ACCGTGTCAATCCTTGGCAG+TGG | - | chr5.1:48402354-48402373 | MS.gene010231:CDS | 55.0% | |
| ATGGCCATGGCCATCCGTTA+CGG | + | chr5.1:48397940-48397959 | None:intergenic | 55.0% | |
| CCCTAATTGGCGCATGCTTC+AGG | - | chr5.1:48398592-48398611 | MS.gene010231:intron | 55.0% | |
| CTGACATTCATGGCCGAGTC+TGG | - | chr5.1:48398150-48398169 | MS.gene010231:intron | 55.0% | |
| GCTCCCCGGTATCACTTAAC+AGG | + | chr5.1:48397653-48397672 | None:intergenic | 55.0% | |
| TGCTTCGGAATGTAGCTCCC+CGG | + | chr5.1:48397667-48397686 | None:intergenic | 55.0% | |
| ! | CGGAGGATGGTTTGTGTTCC+TGG | - | chr5.1:48400555-48400574 | MS.gene010231:intron | 55.0% |
| !! | GTGACGGAGAGTGTCTGAGA+TGG | + | chr5.1:48398131-48398150 | None:intergenic | 55.0% |
| !! | TTCTTGTCTCGGCTCGGCAT+AGG | - | chr5.1:48401283-48401302 | MS.gene010231:CDS | 55.0% |
| !! | TTGTCTCGGCTTGGCATAGG+AGG | - | chr5.1:48401142-48401161 | MS.gene010231:intron | 55.0% |
| AGAGGTTCCTGCCGAAGACG+AGG | - | chr5.1:48397977-48397996 | MS.gene010231:intron | 60.0% | |
| GAAGGCGGTTATGGATGCGG+TGG | - | chr5.1:48398343-48398362 | MS.gene010231:intron | 60.0% | |
| GTTCCTGCCGAAGACGAGGA+TGG | - | chr5.1:48397981-48398000 | MS.gene010231:intron | 60.0% | |
| TAGCCATCCTCGTCTTCGGC+AGG | + | chr5.1:48397987-48398006 | None:intergenic | 60.0% | |
| TCGTCTTCGGCAGGAACCTC+TGG | + | chr5.1:48397978-48397997 | None:intergenic | 60.0% | |
| TCTTCGGCAGGAACCTCTGG+AGG | + | chr5.1:48397975-48397994 | None:intergenic | 60.0% | |
| TGGCCATGGCCATCCGTTAC+GGG | + | chr5.1:48397939-48397958 | None:intergenic | 60.0% | |
| ! | CTCCTCACTCCCGTAACGGA+TGG | - | chr5.1:48397927-48397946 | MS.gene010231:intron | 60.0% |
| !! | ACTCCCGTAACGGATGGCCA+TGG | - | chr5.1:48397933-48397952 | MS.gene010231:intron | 60.0% |
| !! | TGTCTCGGCTCGGCATAGGA+GGG | - | chr5.1:48401287-48401306 | MS.gene010231:CDS | 60.0% |
| !! | TTGTCTCGGCTCGGCATAGG+AGG | - | chr5.1:48401286-48401305 | MS.gene010231:CDS | 60.0% |
| GGCCATCCGTTACGGGAGTG+AGG | + | chr5.1:48397932-48397951 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 48397522 | 48402373 | 48397522 | ID=MS.gene010231 |
| chr5.1 | mRNA | 48397522 | 48402373 | 48397522 | ID=MS.gene010231.t1;Parent=MS.gene010231 |
| chr5.1 | exon | 48401282 | 48402373 | 48401282 | ID=MS.gene010231.t1.exon1;Parent=MS.gene010231.t1 |
| chr5.1 | CDS | 48401282 | 48402373 | 48401282 | ID=cds.MS.gene010231.t1;Parent=MS.gene010231.t1 |
| chr5.1 | exon | 48397522 | 48397578 | 48397522 | ID=MS.gene010231.t1.exon2;Parent=MS.gene010231.t1 |
| chr5.1 | CDS | 48397522 | 48397578 | 48397522 | ID=cds.MS.gene010231.t1;Parent=MS.gene010231.t1 |
| Gene Sequence |
| Protein sequence |