Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010231.t1 | XP_024640663.1 | 86.1 | 346 | 38 | 1 | 38 | 383 | 9 | 344 | 4.90E-169 | 604 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010231.t1 | Q84WU6 | 39.4 | 381 | 164 | 6 | 52 | 383 | 13 | 375 | 5.5e-68 | 259.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010231.t1 | G7KAA1 | 89.1 | 221 | 24 | 0 | 38 | 258 | 9 | 229 | 4.9e-110 | 407.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene010231.t1 | TF | B3-ARF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010231.t1 | MTR_5g062970 | 89.140 | 221 | 24 | 0 | 38 | 258 | 9 | 229 | 2.64e-144 | 409 |
MS.gene010231.t1 | MTR_5g061220 | 58.659 | 358 | 102 | 4 | 64 | 383 | 16 | 365 | 8.24e-140 | 408 |
MS.gene010231.t1 | MTR_1g058210 | 61.562 | 333 | 104 | 6 | 67 | 383 | 12 | 336 | 4.14e-130 | 381 |
MS.gene010231.t1 | MTR_5g060630 | 55.801 | 362 | 116 | 7 | 64 | 383 | 9 | 368 | 3.06e-120 | 358 |
MS.gene010231.t1 | MTR_5g460740 | 55.801 | 362 | 116 | 7 | 64 | 383 | 9 | 368 | 3.06e-120 | 358 |
MS.gene010231.t1 | MTR_5g061890 | 57.186 | 334 | 114 | 8 | 67 | 383 | 12 | 333 | 2.91e-118 | 349 |
MS.gene010231.t1 | MTR_5g060780 | 56.287 | 334 | 117 | 8 | 67 | 383 | 12 | 333 | 9.55e-117 | 345 |
MS.gene010231.t1 | MTR_5g460920 | 56.287 | 334 | 117 | 8 | 67 | 383 | 12 | 333 | 6.13e-116 | 343 |
MS.gene010231.t1 | MTR_2g024430 | 52.727 | 330 | 132 | 10 | 67 | 383 | 20 | 338 | 2.12e-104 | 317 |
MS.gene010231.t1 | MTR_5g040880 | 49.240 | 329 | 151 | 8 | 64 | 383 | 8 | 329 | 4.86e-99 | 304 |
MS.gene010231.t1 | MTR_5g082140 | 50.456 | 329 | 145 | 10 | 67 | 383 | 12 | 334 | 2.08e-94 | 290 |
MS.gene010231.t1 | MTR_2g006270 | 49.701 | 334 | 137 | 10 | 67 | 382 | 13 | 333 | 2.36e-92 | 285 |
MS.gene010231.t1 | MTR_5g040740 | 51.911 | 314 | 127 | 9 | 67 | 366 | 12 | 315 | 6.86e-92 | 282 |
MS.gene010231.t1 | MTR_2g006380 | 48.193 | 332 | 140 | 13 | 67 | 382 | 20 | 335 | 1.31e-87 | 272 |
MS.gene010231.t1 | MTR_3g073420 | 40.379 | 369 | 159 | 8 | 67 | 383 | 19 | 378 | 9.91e-79 | 253 |
MS.gene010231.t1 | MTR_2g094570 | 37.566 | 378 | 158 | 8 | 67 | 382 | 11 | 372 | 2.63e-77 | 251 |
MS.gene010231.t1 | MTR_2g094570 | 37.467 | 379 | 157 | 8 | 67 | 382 | 11 | 372 | 3.50e-77 | 252 |
MS.gene010231.t1 | MTR_2g094570 | 37.467 | 379 | 157 | 8 | 67 | 382 | 67 | 428 | 8.11e-77 | 252 |
MS.gene010231.t1 | MTR_1g094960 | 37.802 | 373 | 169 | 7 | 64 | 382 | 16 | 379 | 3.18e-74 | 242 |
MS.gene010231.t1 | MTR_1g064430 | 36.096 | 374 | 177 | 7 | 67 | 382 | 27 | 396 | 1.80e-70 | 234 |
MS.gene010231.t1 | MTR_1g064430 | 36.096 | 374 | 177 | 7 | 67 | 382 | 40 | 409 | 2.53e-70 | 234 |
MS.gene010231.t1 | MTR_5g062960 | 84.906 | 106 | 16 | 0 | 278 | 383 | 1 | 106 | 1.68e-59 | 191 |
MS.gene010231.t1 | MTR_5g060770 | 46.442 | 267 | 100 | 8 | 116 | 382 | 10 | 233 | 2.69e-58 | 193 |
MS.gene010231.t1 | MTR_4g058930 | 34.667 | 375 | 179 | 10 | 67 | 382 | 12 | 379 | 5.55e-57 | 197 |
MS.gene010231.t1 | MTR_4g058930 | 34.667 | 375 | 179 | 10 | 67 | 382 | 12 | 379 | 7.11e-57 | 197 |
MS.gene010231.t1 | MTR_7g101275 | 33.654 | 312 | 182 | 7 | 77 | 370 | 2 | 306 | 2.10e-56 | 190 |
MS.gene010231.t1 | MTR_7g101280 | 29.610 | 385 | 200 | 8 | 63 | 383 | 27 | 404 | 9.40e-56 | 194 |
MS.gene010231.t1 | MTR_0041s0110 | 29.610 | 385 | 200 | 8 | 63 | 383 | 27 | 404 | 9.40e-56 | 194 |
MS.gene010231.t1 | MTR_2g005240 | 33.728 | 338 | 195 | 7 | 67 | 383 | 23 | 352 | 4.37e-53 | 187 |
MS.gene010231.t1 | MTR_8g100050 | 33.728 | 338 | 196 | 7 | 67 | 383 | 59 | 389 | 4.94e-53 | 187 |
MS.gene010231.t1 | MTR_2g014770 | 31.792 | 346 | 202 | 7 | 63 | 383 | 49 | 385 | 6.71e-53 | 185 |
MS.gene010231.t1 | MTR_8g100050 | 33.728 | 338 | 196 | 7 | 67 | 383 | 59 | 389 | 1.47e-52 | 187 |
MS.gene010231.t1 | MTR_2g014770 | 31.792 | 346 | 202 | 7 | 63 | 383 | 49 | 385 | 1.66e-52 | 185 |
MS.gene010231.t1 | MTR_4g021580 | 31.940 | 335 | 204 | 6 | 67 | 383 | 19 | 347 | 9.91e-51 | 179 |
MS.gene010231.t1 | MTR_4g021580 | 31.940 | 335 | 204 | 6 | 67 | 383 | 19 | 347 | 1.85e-50 | 179 |
MS.gene010231.t1 | MTR_0041s0120 | 31.173 | 324 | 186 | 7 | 77 | 370 | 2 | 318 | 2.97e-49 | 171 |
MS.gene010231.t1 | MTR_7g062540 | 32.249 | 338 | 199 | 10 | 67 | 383 | 14 | 342 | 5.58e-48 | 173 |
MS.gene010231.t1 | MTR_8g027440 | 33.038 | 339 | 194 | 10 | 67 | 383 | 29 | 356 | 4.06e-47 | 171 |
MS.gene010231.t1 | MTR_8g079492 | 32.941 | 340 | 199 | 10 | 66 | 383 | 22 | 354 | 6.55e-47 | 171 |
MS.gene010231.t1 | MTR_8g079492 | 32.941 | 340 | 199 | 10 | 66 | 383 | 22 | 354 | 7.06e-47 | 171 |
MS.gene010231.t1 | MTR_2g018690 | 32.653 | 343 | 197 | 11 | 66 | 383 | 22 | 355 | 2.34e-46 | 170 |
MS.gene010231.t1 | MTR_4g124900 | 32.174 | 345 | 198 | 9 | 63 | 382 | 19 | 352 | 9.34e-46 | 168 |
MS.gene010231.t1 | MTR_2g043250 | 31.351 | 370 | 210 | 10 | 38 | 382 | 2 | 352 | 1.17e-45 | 168 |
MS.gene010231.t1 | MTR_4g124900 | 32.174 | 345 | 198 | 9 | 63 | 382 | 19 | 352 | 1.37e-45 | 168 |
MS.gene010231.t1 | MTR_3g064050 | 31.487 | 343 | 201 | 9 | 66 | 383 | 25 | 358 | 3.02e-45 | 166 |
MS.gene010231.t1 | MTR_5g076270 | 32.070 | 343 | 199 | 10 | 66 | 383 | 23 | 356 | 5.84e-45 | 166 |
MS.gene010231.t1 | MTR_2g093740 | 30.904 | 343 | 209 | 8 | 67 | 383 | 56 | 396 | 9.51e-45 | 164 |
MS.gene010231.t1 | MTR_2g093740 | 30.612 | 343 | 210 | 7 | 67 | 383 | 56 | 396 | 1.96e-44 | 164 |
MS.gene010231.t1 | MTR_2g093740 | 30.612 | 343 | 210 | 7 | 67 | 383 | 56 | 396 | 2.73e-44 | 164 |
MS.gene010231.t1 | MTR_1g024025 | 31.105 | 344 | 206 | 8 | 63 | 383 | 39 | 374 | 3.22e-44 | 164 |
MS.gene010231.t1 | MTR_4g088210 | 27.824 | 363 | 198 | 7 | 63 | 383 | 34 | 374 | 1.66e-42 | 158 |
MS.gene010231.t1 | MTR_4g088210 | 27.824 | 363 | 198 | 7 | 63 | 383 | 34 | 374 | 1.77e-42 | 158 |
MS.gene010231.t1 | MTR_2g093740 | 29.775 | 356 | 209 | 9 | 67 | 383 | 56 | 409 | 2.14e-41 | 155 |
MS.gene010231.t1 | MTR_2g093740 | 29.494 | 356 | 210 | 8 | 67 | 383 | 56 | 409 | 3.50e-41 | 154 |
MS.gene010231.t1 | MTR_2g093740 | 29.775 | 356 | 209 | 9 | 67 | 383 | 56 | 409 | 3.69e-41 | 155 |
MS.gene010231.t1 | MTR_4g060460 | 30.321 | 343 | 211 | 6 | 67 | 383 | 54 | 394 | 6.68e-41 | 154 |
MS.gene010231.t1 | MTR_4g060460 | 30.321 | 343 | 211 | 6 | 67 | 383 | 54 | 394 | 7.03e-41 | 154 |
MS.gene010231.t1 | MTR_8g101360 | 29.630 | 351 | 197 | 7 | 66 | 383 | 30 | 363 | 2.95e-40 | 152 |
MS.gene010231.t1 | MTR_5g460910 | 38.577 | 267 | 99 | 9 | 116 | 382 | 27 | 228 | 3.42e-38 | 140 |
MS.gene010231.t1 | MTR_8g079492 | 32.852 | 277 | 162 | 8 | 124 | 383 | 3 | 272 | 3.71e-36 | 140 |
MS.gene010231.t1 | MTR_2g093740 | 32.468 | 231 | 140 | 4 | 167 | 383 | 38 | 266 | 1.06e-30 | 124 |
MS.gene010231.t1 | MTR_2g093740 | 32.468 | 231 | 140 | 4 | 167 | 383 | 38 | 266 | 1.40e-30 | 123 |
MS.gene010231.t1 | MTR_2g093740 | 30.738 | 244 | 140 | 5 | 167 | 383 | 38 | 279 | 1.70e-27 | 114 |
MS.gene010231.t1 | MTR_2g093740 | 30.738 | 244 | 140 | 5 | 167 | 383 | 38 | 279 | 1.90e-27 | 114 |
MS.gene010231.t1 | MTR_8g446900 | 27.211 | 294 | 182 | 7 | 107 | 382 | 6 | 285 | 1.37e-25 | 107 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010231.t1 | AT1G77850 | 41.398 | 372 | 146 | 9 | 68 | 383 | 20 | 375 | 1.95e-83 | 265 |
MS.gene010231.t1 | AT1G77850 | 41.398 | 372 | 146 | 9 | 68 | 383 | 20 | 375 | 2.02e-83 | 266 |
MS.gene010231.t1 | AT4G30080 | 36.559 | 372 | 170 | 9 | 67 | 382 | 19 | 380 | 7.31e-72 | 237 |
MS.gene010231.t1 | AT2G28350 | 36.082 | 388 | 157 | 10 | 67 | 382 | 10 | 378 | 6.08e-67 | 224 |
MS.gene010231.t1 | AT2G28350 | 36.082 | 388 | 157 | 10 | 67 | 382 | 10 | 378 | 1.02e-66 | 224 |
MS.gene010231.t1 | AT2G46530 | 34.412 | 340 | 190 | 8 | 66 | 383 | 20 | 348 | 2.07e-56 | 194 |
MS.gene010231.t1 | AT2G46530 | 34.412 | 340 | 190 | 8 | 66 | 383 | 41 | 369 | 2.31e-56 | 195 |
MS.gene010231.t1 | AT3G61830 | 33.628 | 339 | 194 | 7 | 66 | 383 | 24 | 352 | 8.49e-55 | 190 |
MS.gene010231.t1 | AT1G59750 | 32.153 | 339 | 199 | 8 | 67 | 383 | 22 | 351 | 3.93e-52 | 184 |
MS.gene010231.t1 | AT1G59750 | 32.153 | 339 | 199 | 8 | 67 | 383 | 22 | 351 | 3.93e-52 | 184 |
MS.gene010231.t1 | AT1G59750 | 32.153 | 339 | 199 | 8 | 67 | 383 | 22 | 351 | 4.05e-52 | 184 |
MS.gene010231.t1 | AT1G59750 | 32.153 | 339 | 199 | 8 | 67 | 383 | 22 | 351 | 4.51e-52 | 184 |
MS.gene010231.t1 | AT4G23980 | 31.471 | 340 | 199 | 8 | 67 | 383 | 12 | 340 | 4.60e-51 | 181 |
MS.gene010231.t1 | AT4G23980 | 31.471 | 340 | 199 | 8 | 67 | 383 | 12 | 340 | 5.85e-51 | 181 |
MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.19e-51 | 183 |
MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.45e-51 | 182 |
MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.45e-51 | 182 |
MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.45e-51 | 182 |
MS.gene010231.t1 | AT5G62000 | 33.138 | 341 | 194 | 10 | 67 | 383 | 61 | 391 | 6.45e-51 | 182 |
MS.gene010231.t1 | AT1G34310 | 32.249 | 338 | 192 | 9 | 67 | 382 | 27 | 349 | 2.83e-47 | 170 |
MS.gene010231.t1 | AT5G37020 | 31.778 | 343 | 200 | 10 | 66 | 383 | 21 | 354 | 4.49e-47 | 171 |
MS.gene010231.t1 | AT2G33860 | 32.164 | 342 | 198 | 9 | 67 | 383 | 54 | 386 | 6.98e-47 | 169 |
MS.gene010231.t1 | AT5G37020 | 31.778 | 343 | 200 | 10 | 66 | 383 | 21 | 354 | 9.49e-47 | 171 |
MS.gene010231.t1 | AT1G34390 | 31.765 | 340 | 191 | 11 | 67 | 383 | 27 | 348 | 1.06e-46 | 168 |
MS.gene010231.t1 | AT1G35540 | 31.268 | 339 | 194 | 9 | 67 | 382 | 27 | 349 | 3.37e-46 | 167 |
MS.gene010231.t1 | AT1G35520 | 32.153 | 339 | 193 | 9 | 67 | 383 | 27 | 350 | 7.66e-46 | 166 |
MS.gene010231.t1 | AT1G30330 | 31.897 | 348 | 193 | 11 | 66 | 383 | 22 | 355 | 2.71e-45 | 167 |
MS.gene010231.t1 | AT1G30330 | 31.897 | 348 | 193 | 11 | 66 | 383 | 24 | 357 | 2.87e-45 | 167 |
MS.gene010231.t1 | AT1G30330 | 31.897 | 348 | 193 | 11 | 66 | 383 | 24 | 357 | 2.87e-45 | 167 |
MS.gene010231.t1 | AT1G35240 | 31.268 | 339 | 196 | 9 | 67 | 383 | 27 | 350 | 6.80e-45 | 163 |
MS.gene010231.t1 | AT1G19850 | 30.469 | 384 | 232 | 11 | 23 | 382 | 2 | 374 | 6.03e-44 | 163 |
MS.gene010231.t1 | AT1G19850 | 30.469 | 384 | 232 | 11 | 23 | 382 | 13 | 385 | 6.40e-44 | 163 |
MS.gene010231.t1 | AT1G34410 | 30.678 | 339 | 198 | 9 | 67 | 383 | 27 | 350 | 3.74e-43 | 159 |
MS.gene010231.t1 | AT5G20730 | 32.464 | 345 | 195 | 10 | 64 | 382 | 21 | 353 | 1.31e-42 | 159 |
MS.gene010231.t1 | AT1G19220 | 30.925 | 346 | 201 | 9 | 64 | 383 | 20 | 353 | 5.72e-42 | 157 |
MS.gene010231.t1 | AT3G61830 | 33.564 | 289 | 167 | 6 | 110 | 383 | 23 | 301 | 6.32e-42 | 154 |
MS.gene010231.t1 | AT5G20730 | 31.519 | 349 | 194 | 11 | 64 | 382 | 21 | 354 | 4.88e-41 | 155 |
MS.gene010231.t1 | AT5G20730 | 32.370 | 346 | 195 | 11 | 64 | 382 | 21 | 354 | 5.49e-41 | 154 |
MS.gene010231.t1 | AT5G60450 | 29.944 | 354 | 210 | 11 | 60 | 383 | 34 | 379 | 1.02e-40 | 153 |
MS.gene010231.t1 | AT5G60450 | 30.000 | 350 | 207 | 11 | 64 | 383 | 62 | 403 | 1.99e-40 | 152 |
MS.gene010231.t1 | AT2G46530 | 35.593 | 236 | 130 | 5 | 163 | 383 | 33 | 261 | 4.28e-39 | 146 |
MS.gene010231.t1 | AT1G34170 | 28.493 | 365 | 218 | 11 | 45 | 382 | 1 | 349 | 1.43e-38 | 144 |
MS.gene010231.t1 | AT2G33860 | 32.051 | 234 | 136 | 5 | 167 | 383 | 2 | 229 | 3.32e-33 | 129 |
MS.gene010231.t1 | AT5G37020 | 30.597 | 268 | 158 | 8 | 135 | 383 | 1 | 259 | 3.84e-32 | 128 |
MS.gene010231.t1 | AT1G34170 | 27.247 | 356 | 208 | 11 | 45 | 382 | 1 | 323 | 3.41e-31 | 124 |
MS.gene010231.t1 | AT1G34170 | 26.849 | 365 | 198 | 11 | 45 | 382 | 1 | 323 | 3.44e-31 | 124 |
MS.gene010231.t1 | AT1G43950 | 36.058 | 208 | 111 | 7 | 67 | 265 | 27 | 221 | 8.86e-31 | 117 |
Find 98 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTATCCTCCTTCCATTTC+CGG | 0.160827 | 5.1:-48402030 | MS.gene010231:CDS |
TTTGGAATCTTCGAGATTTC+AGG | 0.221871 | 5.1:+48402346 | None:intergenic |
TTTGGATTCTGCGAGATTTC+AGG | 0.242925 | 5.1:+48397541 | None:intergenic |
AGCACATTTCTGCCAGATTT+TGG | 0.250965 | 5.1:+48402155 | None:intergenic |
CCCTAATTGGCGCATGCTTC+AGG | 0.281500 | 5.1:-48401281 | MS.gene010231:intron |
AAGGAGGATAACGATGAATA+AGG | 0.293928 | 5.1:+48402040 | None:intergenic |
CTGGAGGAGCTTCTTGTTCA+TGG | 0.301419 | 5.1:+48401917 | None:intergenic |
ATGATGCCATGAAGGTTAAT+TGG | 0.308769 | 5.1:-48401420 | MS.gene010231:CDS |
CTCATTCTAATGTCCCTAAT+TGG | 0.313594 | 5.1:-48401294 | MS.gene010231:CDS |
TGCCAAGGATTGACACGGTT+TGG | 0.344134 | 5.1:+48397523 | None:intergenic |
ACCTGAAGCATGCGCCAATT+AGG | 0.352249 | 5.1:+48401280 | None:intergenic |
TGCCAAGGATTGACACAGTT+TGG | 0.353376 | 5.1:+48402328 | None:intergenic |
GGTAACAGAGAAGGCGGTTA+TGG | 0.361245 | 5.1:-48401539 | MS.gene010231:CDS |
GGTTATGGATGCGGTGGAAT+TGG | 0.365128 | 5.1:-48401524 | MS.gene010231:CDS |
AGATGTCCAATTAACCTTCA+TGG | 0.371714 | 5.1:+48401414 | None:intergenic |
CCTGAAGCATGCGCCAATTA+GGG | 0.377642 | 5.1:+48401281 | None:intergenic |
TCGTCTTCGGCAGGAACCTC+TGG | 0.379847 | 5.1:+48401898 | None:intergenic |
TGGCCATGGCCATCCGTTAC+GGG | 0.387740 | 5.1:+48401937 | None:intergenic |
CTGACATTCATGGCCGAGTC+TGG | 0.393534 | 5.1:-48401723 | MS.gene010231:CDS |
ACACAATCTGATTGCAATAG+TGG | 0.393698 | 5.1:-48401838 | MS.gene010231:CDS |
GCTCCCCGGTATCACTTAAC+AGG | 0.396579 | 5.1:+48402223 | None:intergenic |
GACTGAAATGATGCCGGAAA+TGG | 0.400752 | 5.1:+48402017 | None:intergenic |
ATGGCCATGGCCATCCGTTA+CGG | 0.402053 | 5.1:+48401936 | None:intergenic |
CTCTCCGTCACTGACATTCA+TGG | 0.403879 | 5.1:-48401733 | MS.gene010231:CDS |
ATGAAGGTTAATTGGACATC+TGG | 0.409873 | 5.1:-48401412 | MS.gene010231:CDS |
TACGGGAGTGAGGAGAAGTT+TGG | 0.412326 | 5.1:+48401954 | None:intergenic |
GTATATACAGTTCAGCTTTG+TGG | 0.420575 | 5.1:+48402290 | None:intergenic |
TCTCTTTATTATAGGTTAAG+TGG | 0.429394 | 5.1:-48397570 | MS.gene010231:intron |
GATGACATTGTTTCAGCCTC+AGG | 0.431757 | 5.1:-48401341 | MS.gene010231:CDS |
GATCTTGCCGAAGCTTAACT+TGG | 0.446257 | 5.1:-48401779 | MS.gene010231:CDS |
TTACCATCCCTACCAAAATC+TGG | 0.452282 | 5.1:-48402167 | MS.gene010231:CDS |
TGTATTATCCGAGAGCGAAT+TGG | 0.460538 | 5.1:-48401474 | MS.gene010231:CDS |
TCTGTCCTGTTAAGTGATAC+CGG | 0.467467 | 5.1:-48402228 | MS.gene010231:CDS |
CTCTTTATTATAGGTTAAGT+GGG | 0.469153 | 5.1:-48397569 | MS.gene010231:intron |
TCTGATTGCAATAGTGGCTA+TGG | 0.469763 | 5.1:-48401832 | MS.gene010231:CDS |
GAAGATTCTTCTTTCTTCAA+AGG | 0.471685 | 5.1:+48401373 | None:intergenic |
ATCCAAACCGTGTCAATCCT+TGG | 0.478895 | 5.1:-48397525 | MS.gene010231:CDS |
GAATCGTCCAAGTTAAGCTT+CGG | 0.478925 | 5.1:+48401772 | None:intergenic |
CCTACTGAAAAGGTGTCTCT+TGG | 0.480185 | 5.1:+48401672 | None:intergenic |
ATTGTAGCCATCCTCGTCTT+CGG | 0.480424 | 5.1:+48401885 | None:intergenic |
TAAACTTTAGAATGTAGCTT+CGG | 0.481122 | 5.1:+48402114 | None:intergenic |
AGGAGGATAACGATGAATAA+GGG | 0.485184 | 5.1:+48402041 | None:intergenic |
AAGTCCATCCCCTACTGAAA+AGG | 0.489646 | 5.1:+48401662 | None:intergenic |
TTCCAAACTGTGTCAATCCT+TGG | 0.497383 | 5.1:-48402330 | MS.gene010231:CDS |
AAAATCTGGCAGAAATGTGC+TGG | 0.507785 | 5.1:-48402153 | MS.gene010231:CDS |
CTGTCCTGTTAAGTGATACC+GGG | 0.511775 | 5.1:-48402227 | MS.gene010231:CDS |
AAACTGTGTCAATCCTTGGC+AGG | 0.512278 | 5.1:-48402326 | MS.gene010231:CDS |
TAGCCATCCTCGTCTTCGGC+AGG | 0.513990 | 5.1:+48401889 | None:intergenic |
AGAGAAGGCGGTTATGGATG+CGG | 0.535241 | 5.1:-48401533 | MS.gene010231:CDS |
AAACCGTGTCAATCCTTGGC+AGG | 0.537754 | 5.1:-48397521 | None:intergenic |
GAGCTTCTTGTTCATGGCCA+TGG | 0.538260 | 5.1:+48401923 | None:intergenic |
ATGACATTGTTTCAGCCTCA+GGG | 0.540321 | 5.1:-48401340 | MS.gene010231:CDS |
GTTGGAATATGCCGGAAAAG+TGG | 0.542178 | 5.1:-48401565 | MS.gene010231:CDS |
AAATCAAACCAATTCGCTCT+CGG | 0.544399 | 5.1:+48401466 | None:intergenic |
TATGGATGCGGTGGAATTGG+CGG | 0.548189 | 5.1:-48401521 | MS.gene010231:CDS |
ACAGAGCTCTCAGCACGTCT+AGG | 0.552883 | 5.1:+48402246 | None:intergenic |
AGATATTCGTTGGAATATGC+CGG | 0.558862 | 5.1:-48401573 | MS.gene010231:CDS |
TCAGCTGGGAAGATATTCGT+TGG | 0.559165 | 5.1:-48401583 | MS.gene010231:CDS |
AACAACAAGAAACTCGTCGC+TGG | 0.566110 | 5.1:-48401631 | MS.gene010231:CDS |
GGCAAGATCAAGTCAACGCA+AGG | 0.570350 | 5.1:+48401793 | None:intergenic |
CAACCTGCCAAGGATTGACA+CGG | 0.574441 | 5.1:+48397518 | None:intergenic |
CATGTTCTAAGTGACCTTGT+GGG | 0.576431 | 5.1:+48402085 | None:intergenic |
TTGGAATATGCCGGAAAAGT+GGG | 0.577884 | 5.1:-48401564 | MS.gene010231:CDS |
CTCCTCACTCCCGTAACGGA+TGG | 0.581441 | 5.1:-48401946 | MS.gene010231:CDS |
TGTTGTTGATGATGCCATGA+AGG | 0.584620 | 5.1:-48401428 | MS.gene010231:CDS |
ACATGTTCTAAGTGACCTTG+TGG | 0.589249 | 5.1:+48402084 | None:intergenic |
TGCTTCGGAATGTAGCTCCC+CGG | 0.594410 | 5.1:+48402209 | None:intergenic |
ACTTCTCCTCACTCCCGTAA+CGG | 0.594736 | 5.1:-48401950 | MS.gene010231:CDS |
ACTCCCGTAACGGATGGCCA+TGG | 0.599048 | 5.1:-48401940 | MS.gene010231:CDS |
AGGCGTAGTTCAACCTGCCA+AGG | 0.603512 | 5.1:+48397508 | None:intergenic |
GGCCATCCGTTACGGGAGTG+AGG | 0.606038 | 5.1:+48401944 | None:intergenic |
TGAATAAGTTCAACCTGCCA+AGG | 0.607758 | 5.1:+48402313 | None:intergenic |
ATTAACGACTGAAATGATGC+CGG | 0.608025 | 5.1:+48402011 | None:intergenic |
TCTTCGGCAGGAACCTCTGG+AGG | 0.611963 | 5.1:+48401901 | None:intergenic |
AGAGGTTCCTGCCGAAGACG+AGG | 0.616143 | 5.1:-48401896 | MS.gene010231:CDS |
AAGTGGGAAGGTAACAGAGA+AGG | 0.628618 | 5.1:-48401548 | MS.gene010231:CDS |
AAGGGTGATGATTGTGTGAG+CGG | 0.629467 | 5.1:+48402059 | None:intergenic |
GTTCCTGCCGAAGACGAGGA+TGG | 0.629556 | 5.1:-48401892 | MS.gene010231:CDS |
TATGCGTGTACTGCCAGACT+CGG | 0.634039 | 5.1:+48401710 | None:intergenic |
GAAGGCGGTTATGGATGCGG+TGG | 0.634390 | 5.1:-48401530 | MS.gene010231:CDS |
GAAATGATGCCGGAAATGGA+AGG | 0.642956 | 5.1:+48402021 | None:intergenic |
TTGTGTGAGAATCTTGACAA+AGG | 0.644198 | 5.1:+48401855 | None:intergenic |
GTGACGGAGAGTGTCTGAGA+TGG | 0.649352 | 5.1:+48401745 | None:intergenic |
AAAGTTTACTACTTCCCACA+AGG | 0.649931 | 5.1:-48402099 | MS.gene010231:CDS |
GAAAATACTACATCTGTGTG+AGG | 0.654483 | 5.1:+48401976 | None:intergenic |
TGACATTGTTTCAGCCTCAG+GGG | 0.655401 | 5.1:-48401339 | MS.gene010231:CDS |
TCGGCCATGAATGTCAGTGA+CGG | 0.657021 | 5.1:+48401729 | None:intergenic |
GCAAGATCAAGTCAACGCAA+GGG | 0.677166 | 5.1:+48401794 | None:intergenic |
TGGGAAGGTAACAGAGAAGG+CGG | 0.684452 | 5.1:-48401545 | MS.gene010231:CDS |
ATGATGCCGGAAATGGAAGG+AGG | 0.688005 | 5.1:+48402024 | None:intergenic |
TGAACAAGAAGCTCCTCCAG+AGG | 0.697806 | 5.1:-48401914 | MS.gene010231:CDS |
GGTGTCTCTTGGATTTACCG+CGG | 0.707333 | 5.1:+48401683 | None:intergenic |
AATATGCCGGAAAAGTGGGA+AGG | 0.715565 | 5.1:-48401560 | MS.gene010231:CDS |
TGTCCTGTTAAGTGATACCG+GGG | 0.717824 | 5.1:-48402226 | MS.gene010231:CDS |
TAGCTTCGGAATCTTGACTG+AGG | 0.723506 | 5.1:+48402128 | None:intergenic |
ATATCTGAGATTGTCCCCTG+AGG | 0.748699 | 5.1:+48401325 | None:intergenic |
CATCTGTGTGAGGATCAACA+AGG | 0.762493 | 5.1:+48401986 | None:intergenic |
CAGTACACGCATATCTACCG+CGG | 0.778287 | 5.1:-48401700 | MS.gene010231:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATAAAGAGATAAAAATA+TGG | + | chr5.1:48402295-48402314 | None:intergenic | 10.0% |
!!! | TATTTTTATCTCTTTATTAT+AGG | - | chr5.1:48402295-48402314 | MS.gene010231:CDS | 10.0% |
!! | TTTGTTAATTCAAATTACTT+TGG | - | chr5.1:48400024-48400043 | MS.gene010231:intron | 15.0% |
!!! | AAATGTAATTCTAAAATCAA+GGG | - | chr5.1:48398865-48398884 | MS.gene010231:intron | 15.0% |
!! | AAATACTCTTAATGCTTAAT+AGG | - | chr5.1:48402179-48402198 | MS.gene010231:CDS | 20.0% |
!! | AATATCAACAAAGTCAATTA+AGG | + | chr5.1:48401486-48401505 | None:intergenic | 20.0% |
!! | TTACAGTTCAAATTTATAGT+TGG | - | chr5.1:48398679-48398698 | MS.gene010231:intron | 20.0% |
!!! | AAAAAGCTGTTTATGTTTTT+TGG | + | chr5.1:48398989-48399008 | None:intergenic | 20.0% |
!!! | AAAAGCTGTTTATGTTTTTT+GGG | + | chr5.1:48398988-48399007 | None:intergenic | 20.0% |
!!! | ATGGTAAATATAGATTTTGT+AGG | + | chr5.1:48397693-48397712 | None:intergenic | 20.0% |
!!! | CAAATGTAATTCTAAAATCA+AGG | - | chr5.1:48398864-48398883 | MS.gene010231:intron | 20.0% |
!!! | TGGTAAATATAGATTTTGTA+GGG | + | chr5.1:48397692-48397711 | None:intergenic | 20.0% |
!!! | TTAATTGACTTTGTTGATAT+TGG | - | chr5.1:48401485-48401504 | MS.gene010231:CDS | 20.0% |
!!! | TTTGTTTTTTTTTCTTGTCT+CGG | - | chr5.1:48401128-48401147 | MS.gene010231:intron | 20.0% |
! | AAATTGTCTTCATACCAAAT+TGG | + | chr5.1:48400686-48400705 | None:intergenic | 25.0% |
! | AACATATGATGTGTAATTCT+GGG | - | chr5.1:48399777-48399796 | MS.gene010231:intron | 25.0% |
! | AATTGTCTTCATACCAAATT+GGG | + | chr5.1:48400685-48400704 | None:intergenic | 25.0% |
! | ACATTTGAATCTTATCCTAT+AGG | + | chr5.1:48398851-48398870 | None:intergenic | 25.0% |
! | ACTATTGGAGAAAGTTATTT+AGG | + | chr5.1:48402101-48402120 | None:intergenic | 25.0% |
! | ACTTGAAATGAGAAAATACA+TGG | + | chr5.1:48401645-48401664 | None:intergenic | 25.0% |
! | AGTTATTATTAGAGACTAGT+TGG | - | chr5.1:48399060-48399079 | MS.gene010231:intron | 25.0% |
! | CATTTGAATCTTATCCTATA+GGG | + | chr5.1:48398850-48398869 | None:intergenic | 25.0% |
! | CTCTTTATTATAGGTTAAGT+GGG | - | chr5.1:48402304-48402323 | MS.gene010231:CDS | 25.0% |
! | TCAAAGAAATCATTGAATTC+TGG | + | chr5.1:48398718-48398737 | None:intergenic | 25.0% |
! | TCTCTTTATTATAGGTTAAG+TGG | - | chr5.1:48402303-48402322 | MS.gene010231:CDS | 25.0% |
! | TCTTAGAGAATATCAACTAT+TGG | + | chr5.1:48402116-48402135 | None:intergenic | 25.0% |
! | TCTTTGATAAGTATTAGTGT+TGG | - | chr5.1:48398731-48398750 | MS.gene010231:intron | 25.0% |
! | TTAATCAAGAACAAAAGTGA+TGG | + | chr5.1:48399392-48399411 | None:intergenic | 25.0% |
! | TTCTTTCTATTGATGGAAAA+TGG | + | chr5.1:48399148-48399167 | None:intergenic | 25.0% |
! | TTGTGAATTCTTTCTATTGA+TGG | + | chr5.1:48399155-48399174 | None:intergenic | 25.0% |
!! | AATTTTTGTGTGATATTTGG+TGG | - | chr5.1:48400460-48400479 | MS.gene010231:intron | 25.0% |
!! | AGACAATTTTATTAGCTCAT+TGG | - | chr5.1:48400697-48400716 | MS.gene010231:intron | 25.0% |
!! | CACAATTTTTGTGTGATATT+TGG | - | chr5.1:48400457-48400476 | MS.gene010231:intron | 25.0% |
!! | TTAGCTCATTGGATTTATTT+TGG | - | chr5.1:48400708-48400727 | MS.gene010231:intron | 25.0% |
!! | TTTTTCTTTCTTCTTCATTC+TGG | - | chr5.1:48399296-48399315 | MS.gene010231:intron | 25.0% |
!!! | TAAACTTTAGAATGTAGCTT+CGG | + | chr5.1:48397762-48397781 | None:intergenic | 25.0% |
!!! | TGTATTTTCTCATTTCAAGT+TGG | - | chr5.1:48401645-48401664 | MS.gene010231:CDS | 25.0% |
!!! | TTGGATATCATCATTGATTT+TGG | - | chr5.1:48401390-48401409 | MS.gene010231:CDS | 25.0% |
AACACCTTAAGCCTATATAT+AGG | + | chr5.1:48399092-48399111 | None:intergenic | 30.0% | |
AGTCTCTAATAATAACTGCA+AGG | + | chr5.1:48399057-48399076 | None:intergenic | 30.0% | |
ATCGAAGAATCAGAATGAAA+CGG | + | chr5.1:48399555-48399574 | None:intergenic | 30.0% | |
ATTGGAGAAAGTTATTTAGG+CGG | + | chr5.1:48402098-48402117 | None:intergenic | 30.0% | |
CAAAATTCTTTGTGATCAAG+AGG | + | chr5.1:48398953-48398972 | None:intergenic | 30.0% | |
CAACATATGATGTGTAATTC+TGG | - | chr5.1:48399776-48399795 | MS.gene010231:intron | 30.0% | |
CATCATTCATCTTCTAATTG+TGG | + | chr5.1:48398788-48398807 | None:intergenic | 30.0% | |
GAAGATTCTTCTTTCTTCAA+AGG | + | chr5.1:48398503-48398522 | None:intergenic | 30.0% | |
GAATTTGTCATATAGCTTGA+AGG | - | chr5.1:48400772-48400791 | MS.gene010231:intron | 30.0% | |
GATCAATCTCTCAACAATAT+AGG | + | chr5.1:48400199-48400218 | None:intergenic | 30.0% | |
TGATACCATGTTATGAAACA+TGG | + | chr5.1:48399204-48399223 | None:intergenic | 30.0% | |
TTATGGATATTGTGAAGACA+AGG | - | chr5.1:48400345-48400364 | MS.gene010231:intron | 30.0% | |
TTCTTGCATGAATTCTTGAT+CGG | - | chr5.1:48399599-48399618 | MS.gene010231:intron | 30.0% | |
TTCTTGTGTGTATACAGTTA+TGG | - | chr5.1:48400328-48400347 | MS.gene010231:intron | 30.0% | |
! | AAAGAAGCATACAGAAGAAT+TGG | + | chr5.1:48398904-48398923 | None:intergenic | 30.0% |
! | AAGAAGCATACAGAAGAATT+GGG | + | chr5.1:48398903-48398922 | None:intergenic | 30.0% |
! | GTACATACACTTTCTTCTTT+TGG | - | chr5.1:48398614-48398633 | MS.gene010231:intron | 30.0% |
! | TATAGCTTGAAGGCAATTTT+CGG | - | chr5.1:48400782-48400801 | MS.gene010231:intron | 30.0% |
! | TTTTTGTTCAAAACTCAGCT+GGG | - | chr5.1:48398276-48398295 | MS.gene010231:intron | 30.0% |
!! | ACGTCTAGGATTTTTATTTG+GGG | + | chr5.1:48397616-48397635 | None:intergenic | 30.0% |
!! | CACGTCTAGGATTTTTATTT+GGG | + | chr5.1:48397617-48397636 | None:intergenic | 30.0% |
!!! | GAATTGGTTTGATTTTGTAG+TGG | - | chr5.1:48398415-48398434 | MS.gene010231:intron | 30.0% |
!!! | TCATTTTTTTTTCTGCTTGC+TGG | - | chr5.1:48400881-48400900 | MS.gene010231:intron | 30.0% |
AAAGTTTACTACTTCCCACA+AGG | - | chr5.1:48397774-48397793 | MS.gene010231:intron | 35.0% | |
AAATCAAACCAATTCGCTCT+CGG | + | chr5.1:48398410-48398429 | None:intergenic | 35.0% | |
AAATTGCAACATAGAACGCA+AGG | + | chr5.1:48399664-48399683 | None:intergenic | 35.0% | |
AAGAATTGGTTGCTGATGTT+TGG | - | chr5.1:48400268-48400287 | MS.gene010231:intron | 35.0% | |
AAGGAGGATAACGATGAATA+AGG | + | chr5.1:48397836-48397855 | None:intergenic | 35.0% | |
AAGGTTCTCTATGATGTGTT+TGG | - | chr5.1:48399825-48399844 | MS.gene010231:intron | 35.0% | |
AATCGCAAACCCTAAGAATT+GGG | + | chr5.1:48399485-48399504 | None:intergenic | 35.0% | |
ACACAATCTGATTGCAATAG+TGG | - | chr5.1:48398035-48398054 | MS.gene010231:intron | 35.0% | |
ACCAACATGTTGAAAACCAA+TGG | + | chr5.1:48400970-48400989 | None:intergenic | 35.0% | |
ACTACTCATAATGCACTCAA+TGG | - | chr5.1:48400111-48400130 | MS.gene010231:intron | 35.0% | |
AGAATCAGAATGAAACGGAA+AGG | + | chr5.1:48399550-48399569 | None:intergenic | 35.0% | |
AGATATTCGTTGGAATATGC+CGG | - | chr5.1:48398300-48398319 | MS.gene010231:intron | 35.0% | |
AGATGTCCAATTAACCTTCA+TGG | + | chr5.1:48398462-48398481 | None:intergenic | 35.0% | |
AGCAACCAATTCTTCACAAA+AGG | + | chr5.1:48400262-48400281 | None:intergenic | 35.0% | |
AGGAGGATAACGATGAATAA+GGG | + | chr5.1:48397835-48397854 | None:intergenic | 35.0% | |
AGTGCCTATATATAGGCTTA+AGG | - | chr5.1:48399085-48399104 | MS.gene010231:intron | 35.0% | |
ATCATTTCCCCCAATTCTTA+GGG | - | chr5.1:48399473-48399492 | MS.gene010231:intron | 35.0% | |
ATGAAGGTTAATTGGACATC+TGG | - | chr5.1:48398461-48398480 | MS.gene010231:intron | 35.0% | |
ATGATGCCATGAAGGTTAAT+TGG | - | chr5.1:48398453-48398472 | MS.gene010231:intron | 35.0% | |
ATTAACGACTGAAATGATGC+CGG | + | chr5.1:48397865-48397884 | None:intergenic | 35.0% | |
CAAACAAGTTTGTGCACATA+AGG | + | chr5.1:48400933-48400952 | None:intergenic | 35.0% | |
CTATGTTGCAATTTGACTCT+TGG | - | chr5.1:48399670-48399689 | MS.gene010231:intron | 35.0% | |
CTATTTCGAATGACTGATGT+TGG | - | chr5.1:48402262-48402281 | MS.gene010231:CDS | 35.0% | |
CTCATTCTAATGTCCCTAAT+TGG | - | chr5.1:48398579-48398598 | MS.gene010231:intron | 35.0% | |
CTGGAAGTTATTTGCTTGTT+TGG | - | chr5.1:48400900-48400919 | MS.gene010231:intron | 35.0% | |
CTTCCTTGGATTTGATGTAT+TGG | - | chr5.1:48400434-48400453 | MS.gene010231:intron | 35.0% | |
GAAAATACATGGAAAGATGC+CGG | + | chr5.1:48401634-48401653 | None:intergenic | 35.0% | |
GAAAATACTACATCTGTGTG+AGG | + | chr5.1:48397900-48397919 | None:intergenic | 35.0% | |
GAAGCTTCTCTCTTACAATA+TGG | + | chr5.1:48401892-48401911 | None:intergenic | 35.0% | |
GACAAGAAAAACCAAATGCA+AGG | + | chr5.1:48401271-48401290 | None:intergenic | 35.0% | |
GATGTGTAATTCTGGGTATA+AGG | - | chr5.1:48399784-48399803 | MS.gene010231:intron | 35.0% | |
GCTTCATGGTAAAAGTGATT+TGG | + | chr5.1:48401975-48401994 | None:intergenic | 35.0% | |
GTATATACAGTTCAGCTTTG+TGG | + | chr5.1:48397586-48397605 | None:intergenic | 35.0% | |
GTTGAGAGATTGATCAGAAT+TGG | - | chr5.1:48400204-48400223 | MS.gene010231:intron | 35.0% | |
GTTGGTTAGTGCCTATATAT+AGG | - | chr5.1:48399078-48399097 | MS.gene010231:intron | 35.0% | |
TAGGCGGTCAATGATAAAAA+CGG | + | chr5.1:48402082-48402101 | None:intergenic | 35.0% | |
TAGTGCAAAACCAATTCAAG+AGG | + | chr5.1:48400095-48400114 | None:intergenic | 35.0% | |
TATAAGGATCACTGGATGTT+TGG | - | chr5.1:48399800-48399819 | MS.gene010231:intron | 35.0% | |
TCATCTCTCAAGTTAAGCAA+AGG | - | chr5.1:48400653-48400672 | MS.gene010231:intron | 35.0% | |
TGAACAAACTTCACACCAAA+AGG | + | chr5.1:48401212-48401231 | None:intergenic | 35.0% | |
TGTATGATGTTGCTGAATTC+TGG | - | chr5.1:48399971-48399990 | MS.gene010231:intron | 35.0% | |
TTGTGTGAGAATCTTGACAA+AGG | + | chr5.1:48398021-48398040 | None:intergenic | 35.0% | |
TTTCTTAGCCGATGTATTTC+CGG | - | chr5.1:48401612-48401631 | MS.gene010231:CDS | 35.0% | |
! | AGATTTTGTAGGGAATGCTT+CGG | + | chr5.1:48397682-48397701 | None:intergenic | 35.0% |
! | CAAAGAATTTTGCAGCATTG+AGG | - | chr5.1:48398961-48398980 | MS.gene010231:intron | 35.0% |
! | GATATCCAAAAAGAAGTGCA+AGG | + | chr5.1:48401379-48401398 | None:intergenic | 35.0% |
! | GTTTTTGTTCAAAACTCAGC+TGG | - | chr5.1:48398275-48398294 | MS.gene010231:intron | 35.0% |
! | TCAAGTTCTAGTGTAAGTGA+AGG | - | chr5.1:48400832-48400851 | MS.gene010231:intron | 35.0% |
! | TGCAAATGTTGCTTGTGATT+TGG | - | chr5.1:48400744-48400763 | MS.gene010231:intron | 35.0% |
! | TTCGTTTGTTGGTGTGTTTA+TGG | - | chr5.1:48400527-48400546 | MS.gene010231:intron | 35.0% |
! | TTTGGAATCTTCGAGATTTC+AGG | + | chr5.1:48397530-48397549 | None:intergenic | 35.0% |
!! | ATTTCTGCCAGATTTTGGTA+GGG | + | chr5.1:48397716-48397735 | None:intergenic | 35.0% |
!! | CACTTTTATCTTTGGAAGCT+TGG | - | chr5.1:48401169-48401188 | MS.gene010231:intron | 35.0% |
!! | CAGAATTGGTTCTACAAGTT+TGG | - | chr5.1:48400218-48400237 | MS.gene010231:intron | 35.0% |
!! | CGTCTAGGATTTTTATTTGG+GGG | + | chr5.1:48397615-48397634 | None:intergenic | 35.0% |
!! | GAGGACATCACTTTTATCTT+TGG | - | chr5.1:48401161-48401180 | MS.gene010231:intron | 35.0% |
!! | GCACGTCTAGGATTTTTATT+TGG | + | chr5.1:48397618-48397637 | None:intergenic | 35.0% |
!! | GTCTAGGATTTTTATTTGGG+GGG | + | chr5.1:48397614-48397633 | None:intergenic | 35.0% |
!! | TCTAGGATTTTTATTTGGGG+GGG | + | chr5.1:48397613-48397632 | None:intergenic | 35.0% |
!! | TTGTTGATATTGGCTTCTAC+CGG | - | chr5.1:48401495-48401514 | MS.gene010231:CDS | 35.0% |
!!! | ACACATTGTTGAGTTGGTTT+TGG | - | chr5.1:48400053-48400072 | MS.gene010231:intron | 35.0% |
!!! | CACTTTTATCTTTGGAACCT+TGG | - | chr5.1:48401313-48401332 | MS.gene010231:CDS | 35.0% |
!!! | GCATTTGGTTTTTCTTGTCT+CGG | - | chr5.1:48401272-48401291 | MS.gene010231:intron | 35.0% |
!!! | TGCTATTTTGTTGAAGCCAT+TGG | - | chr5.1:48400951-48400970 | MS.gene010231:intron | 35.0% |
!!! | TTGTTGAGTTGGTTTTGGTA+TGG | - | chr5.1:48400058-48400077 | MS.gene010231:intron | 35.0% |
!!! | TTTTTTTTCTTGTCTCGGCT+TGG | - | chr5.1:48401133-48401152 | MS.gene010231:intron | 35.0% |
AAAATCTGGCAGAAATGTGC+TGG | - | chr5.1:48397720-48397739 | MS.gene010231:intron | 40.0% | |
AACATGGCATCCATTGATGA+AGG | + | chr5.1:48399188-48399207 | None:intergenic | 40.0% | |
AAGGCAAAGGCTTATCTTTG+TGG | - | chr5.1:48400851-48400870 | MS.gene010231:intron | 40.0% | |
ACAACTCAAGGTTGAACCAA+TGG | + | chr5.1:48401556-48401575 | None:intergenic | 40.0% | |
ACATGGCTATGCATCTCTAT+TGG | - | chr5.1:48401099-48401118 | MS.gene010231:intron | 40.0% | |
ACATGGTATCAGAGCAAGAT+TGG | - | chr5.1:48399213-48399232 | MS.gene010231:intron | 40.0% | |
ACCATAGAAAACCATCCATG+TGG | + | chr5.1:48401066-48401085 | None:intergenic | 40.0% | |
ACTCATAATGCACTCAATGG+AGG | - | chr5.1:48400114-48400133 | MS.gene010231:intron | 40.0% | |
ACTTTCTCGAGAAAATGCAG+CGG | + | chr5.1:48399259-48399278 | None:intergenic | 40.0% | |
AGAATTGGGGGAAATGATGA+TGG | + | chr5.1:48399471-48399490 | None:intergenic | 40.0% | |
AGAGTTGTATGAAGCTTCCT+TGG | - | chr5.1:48400420-48400439 | MS.gene010231:intron | 40.0% | |
AGCACAAGACAAGAAGAACA+AGG | + | chr5.1:48401420-48401439 | None:intergenic | 40.0% | |
AGCTGAAACCATGGTACTTT+CGG | + | chr5.1:48399031-48399050 | None:intergenic | 40.0% | |
AGGACTTTCAACAAACACCT+TGG | + | chr5.1:48399870-48399889 | None:intergenic | 40.0% | |
AGGCGGTCAATGATAAAAAC+GGG | + | chr5.1:48402081-48402100 | None:intergenic | 40.0% | |
ATCGCAAACCCTAAGAATTG+GGG | + | chr5.1:48399484-48399503 | None:intergenic | 40.0% | |
ATGACATTGTTTCAGCCTCA+GGG | - | chr5.1:48398533-48398552 | MS.gene010231:intron | 40.0% | |
ATGCAGCGGAAAATTGTTCA+AGG | + | chr5.1:48399245-48399264 | None:intergenic | 40.0% | |
ATGGTTTGAATGCATCCACA+TGG | - | chr5.1:48401048-48401067 | MS.gene010231:intron | 40.0% | |
ATTCTGGGTATAAGGATCAC+TGG | - | chr5.1:48399792-48399811 | MS.gene010231:intron | 40.0% | |
ATTCTTGCTGCCTCTTGAAT+TGG | - | chr5.1:48400082-48400101 | MS.gene010231:intron | 40.0% | |
CATCATTTCCCCCAATTCTT+AGG | - | chr5.1:48399472-48399491 | MS.gene010231:intron | 40.0% | |
CATGGTACTTTCGGAAAACA+AGG | + | chr5.1:48399022-48399041 | None:intergenic | 40.0% | |
CCATGAAAGAACCAAGCATT+TGG | - | chr5.1:48401856-48401875 | MS.gene010231:CDS | 40.0% | |
CTTATTGCATACTGCTTCCA+AGG | - | chr5.1:48399850-48399869 | MS.gene010231:intron | 40.0% | |
GAAAGATGCCGGAAATACAT+CGG | + | chr5.1:48401623-48401642 | None:intergenic | 40.0% | |
GAAATCTGCAAGTTGCTCTT+TGG | + | chr5.1:48401948-48401967 | None:intergenic | 40.0% | |
GAAGCTTAGGACATTGAATG+TGG | + | chr5.1:48401781-48401800 | None:intergenic | 40.0% | |
GAATCGCAAACCCTAAGAAT+TGG | + | chr5.1:48399486-48399505 | None:intergenic | 40.0% | |
GAATCGTCCAAGTTAAGCTT+CGG | + | chr5.1:48398104-48398123 | None:intergenic | 40.0% | |
GAGTTCTTGAGAACTCTTGA+TGG | - | chr5.1:48401448-48401467 | MS.gene010231:CDS | 40.0% | |
GATCACTGGATGTTTGGTAA+AGG | - | chr5.1:48399806-48399825 | MS.gene010231:intron | 40.0% | |
GGATATTGTGAAGACAAGGT+TGG | - | chr5.1:48400349-48400368 | MS.gene010231:intron | 40.0% | |
GGATGCCATGTTTCATAACA+TGG | - | chr5.1:48399196-48399215 | MS.gene010231:intron | 40.0% | |
GTGCCAATACATCAAATCCA+AGG | + | chr5.1:48400440-48400459 | None:intergenic | 40.0% | |
TACAGAAGAATTGGGTGTCA+TGG | + | chr5.1:48398895-48398914 | None:intergenic | 40.0% | |
TCTAGTGTAAGTGAAGGCAA+AGG | - | chr5.1:48400838-48400857 | MS.gene010231:intron | 40.0% | |
TCTGATTGCAATAGTGGCTA+TGG | - | chr5.1:48398041-48398060 | MS.gene010231:intron | 40.0% | |
TCTGTCCTGTTAAGTGATAC+CGG | - | chr5.1:48397645-48397664 | MS.gene010231:intron | 40.0% | |
TGAAAACTCTCGTTGCTTCA+TGG | + | chr5.1:48401989-48402008 | None:intergenic | 40.0% | |
TGAATAAGTTCAACCTGCCA+AGG | + | chr5.1:48397563-48397582 | None:intergenic | 40.0% | |
TGATTGTCACAGAAGAGAAC+AGG | + | chr5.1:48401803-48401822 | None:intergenic | 40.0% | |
TGGTTCTTTCATGGAACACA+GGG | + | chr5.1:48401850-48401869 | None:intergenic | 40.0% | |
TGGTTTGAAGACACATCACA+TGG | - | chr5.1:48401082-48401101 | MS.gene010231:intron | 40.0% | |
TGTATTATCCGAGAGCGAAT+TGG | - | chr5.1:48398399-48398418 | MS.gene010231:intron | 40.0% | |
TGTGGATGCATTCAAACCAT+AGG | + | chr5.1:48401048-48401067 | None:intergenic | 40.0% | |
TTACCATCCCTACCAAAATC+TGG | - | chr5.1:48397706-48397725 | MS.gene010231:intron | 40.0% | |
TTCCAAACTGTGTCAATCCT+TGG | - | chr5.1:48397543-48397562 | MS.gene010231:CDS | 40.0% | |
TTGAACACCTTCCAACTTGA+GGG | - | chr5.1:48401677-48401696 | MS.gene010231:CDS | 40.0% | |
TTGAACCAATATAGCCAGCA+AGG | + | chr5.1:48400816-48400835 | None:intergenic | 40.0% | |
TTGGAATATGCCGGAAAAGT+GGG | - | chr5.1:48398309-48398328 | MS.gene010231:intron | 40.0% | |
TTGGTGTGTTTATGGAGGTA+CGG | - | chr5.1:48400535-48400554 | MS.gene010231:intron | 40.0% | |
TTGTTGAAAGTCCTCACTGA+AGG | - | chr5.1:48399876-48399895 | MS.gene010231:intron | 40.0% | |
TTTCGGAAAACAAGGTTCGA+TGG | + | chr5.1:48399014-48399033 | None:intergenic | 40.0% | |
TTTGAACACCTTCCAACTTG+AGG | - | chr5.1:48401676-48401695 | MS.gene010231:CDS | 40.0% | |
TTTGAATGCATCCACATGGA+TGG | - | chr5.1:48401052-48401071 | MS.gene010231:intron | 40.0% | |
TTTGGATTCTGCGAGATTTC+AGG | + | chr5.1:48402335-48402354 | None:intergenic | 40.0% | |
! | AAGAGACACCTTTTCAGTAG+GGG | - | chr5.1:48398203-48398222 | MS.gene010231:intron | 40.0% |
! | ACAGAAGAATTGGGTGTCAT+GGG | + | chr5.1:48398894-48398913 | None:intergenic | 40.0% |
! | ACATGTTCTAAGTGACCTTG+TGG | + | chr5.1:48397792-48397811 | None:intergenic | 40.0% |
! | AGCACATTTCTGCCAGATTT+TGG | + | chr5.1:48397721-48397740 | None:intergenic | 40.0% |
! | ATTGGTTCAACCTTGAGTTG+TGG | - | chr5.1:48401555-48401574 | MS.gene010231:CDS | 40.0% |
! | ATTTGGTGGCTTCAGATTTG+TGG | - | chr5.1:48400474-48400493 | MS.gene010231:intron | 40.0% |
! | CAAGAGACACCTTTTCAGTA+GGG | - | chr5.1:48398202-48398221 | MS.gene010231:intron | 40.0% |
! | CATGGCCTTTTGTGAAGAAT+TGG | - | chr5.1:48400254-48400273 | MS.gene010231:intron | 40.0% |
! | CATGTTCTAAGTGACCTTGT+GGG | + | chr5.1:48397791-48397810 | None:intergenic | 40.0% |
! | CCAAATGCTTGGTTCTTTCA+TGG | + | chr5.1:48401859-48401878 | None:intergenic | 40.0% |
! | CTCTTCCTTGCACTTCTTTT+TGG | - | chr5.1:48401371-48401390 | MS.gene010231:CDS | 40.0% |
! | GCTTTTCTCTCCTTCATCAA+TGG | - | chr5.1:48399175-48399194 | MS.gene010231:intron | 40.0% |
! | GTTTGTTGGTGTGTTTATGG+AGG | - | chr5.1:48400530-48400549 | MS.gene010231:intron | 40.0% |
! | TCCACATGGATGGTTTTCTA+TGG | - | chr5.1:48401062-48401081 | MS.gene010231:intron | 40.0% |
! | TTGGTTCTTTCATGGAACAC+AGG | + | chr5.1:48401851-48401870 | None:intergenic | 40.0% |
!! | CATTTCTGCCAGATTTTGGT+AGG | + | chr5.1:48397717-48397736 | None:intergenic | 40.0% |
!! | CTAGGATTTTTATTTGGGGG+GGG | + | chr5.1:48397612-48397631 | None:intergenic | 40.0% |
!! | GTTTTCCTTGCTGGCTATAT+TGG | - | chr5.1:48400808-48400827 | MS.gene010231:intron | 40.0% |
!! | TGTATAGCTTTGTGCCCTAT+AGG | - | chr5.1:48398833-48398852 | MS.gene010231:intron | 40.0% |
!! | TGTTGTTGATGATGCCATGA+AGG | - | chr5.1:48398445-48398464 | MS.gene010231:intron | 40.0% |
!! | TTGTTGCTTCATGGTCCTTT+TGG | - | chr5.1:48401194-48401213 | MS.gene010231:intron | 40.0% |
!! | TTTGGTGTTGCTTACTGACA+TGG | - | chr5.1:48400236-48400255 | MS.gene010231:intron | 40.0% |
!!! | AGCTTGGTTTTGTTGCTTCA+TGG | - | chr5.1:48401185-48401204 | MS.gene010231:intron | 40.0% |
!!! | CTTGTTTTCCGAAAGTACCA+TGG | - | chr5.1:48399020-48399039 | MS.gene010231:intron | 40.0% |
!!! | GAGGGCATCACTTTTATCTT+TGG | - | chr5.1:48401305-48401324 | MS.gene010231:CDS | 40.0% |
!!! | GCCATTGGTTTTCAACATGT+TGG | - | chr5.1:48400966-48400985 | MS.gene010231:intron | 40.0% |
!!! | TTGCTTGGAAGCATTGGTTT+TGG | - | chr5.1:48401022-48401041 | MS.gene010231:intron | 40.0% |
AAACTGTGTCAATCCTTGGC+AGG | - | chr5.1:48397547-48397566 | MS.gene010231:CDS | 45.0% | |
AACAACAAGAAACTCGTCGC+TGG | - | chr5.1:48398242-48398261 | MS.gene010231:intron | 45.0% | |
AAGCAAGTCCAATGCAATGC+TGG | + | chr5.1:48399930-48399949 | None:intergenic | 45.0% | |
AAGGGTGATGATTGTGTGAG+CGG | + | chr5.1:48397817-48397836 | None:intergenic | 45.0% | |
AAGTCCATCCCCTACTGAAA+AGG | + | chr5.1:48398214-48398233 | None:intergenic | 45.0% | |
AAGTGGGAAGGTAACAGAGA+AGG | - | chr5.1:48398325-48398344 | MS.gene010231:intron | 45.0% | |
AATATGCCGGAAAAGTGGGA+AGG | - | chr5.1:48398313-48398332 | MS.gene010231:intron | 45.0% | |
AGGGTTGGAAGCTATGTGAA+TGG | + | chr5.1:48401831-48401850 | None:intergenic | 45.0% | |
AGGTTGAACCAATGGAAGGA+AGG | + | chr5.1:48401548-48401567 | None:intergenic | 45.0% | |
ATCCAAACCGTGTCAATCCT+TGG | - | chr5.1:48402348-48402367 | MS.gene010231:CDS | 45.0% | |
ATCTGCAAGTTGCTCTTTGG+AGG | + | chr5.1:48401945-48401964 | None:intergenic | 45.0% | |
ATTGTAGCCATCCTCGTCTT+CGG | + | chr5.1:48397991-48398010 | None:intergenic | 45.0% | |
CAAGAAGCAACCACAACTCA+AGG | + | chr5.1:48401568-48401587 | None:intergenic | 45.0% | |
CACACCAACAAACGAATTCG+AGG | + | chr5.1:48400523-48400542 | None:intergenic | 45.0% | |
CAGAAGAGAACAGGAAGCTT+AGG | + | chr5.1:48401794-48401813 | None:intergenic | 45.0% | |
CAGCGGAAAATTGTTCAAGG+TGG | + | chr5.1:48399242-48399261 | None:intergenic | 45.0% | |
CATCTGTGTGAGGATCAACA+AGG | + | chr5.1:48397890-48397909 | None:intergenic | 45.0% | |
CATGCTGTTCTTGGATTGCT+TGG | - | chr5.1:48401007-48401026 | MS.gene010231:intron | 45.0% | |
CCATAGTCAACAATGGAAGG+AGG | + | chr5.1:48401243-48401262 | None:intergenic | 45.0% | |
CCATAGTCTACAATGGAAGG+AGG | + | chr5.1:48401351-48401370 | None:intergenic | 45.0% | |
CCTCCTTCCATTGTAGACTA+TGG | - | chr5.1:48401348-48401367 | MS.gene010231:CDS | 45.0% | |
CGTTATCCTCCTTCCATTTC+CGG | - | chr5.1:48397843-48397862 | MS.gene010231:intron | 45.0% | |
CTATGGCTCTTCCTTGCATT+TGG | - | chr5.1:48401257-48401276 | MS.gene010231:intron | 45.0% | |
CTCAAGGTTGAACCAATGGA+AGG | + | chr5.1:48401552-48401571 | None:intergenic | 45.0% | |
CTCAATGGAGGTTTCATTGC+TGG | - | chr5.1:48400126-48400145 | MS.gene010231:intron | 45.0% | |
CTGTCCTGTTAAGTGATACC+GGG | - | chr5.1:48397646-48397665 | MS.gene010231:intron | 45.0% | |
GAAATGATGCCGGAAATGGA+AGG | + | chr5.1:48397855-48397874 | None:intergenic | 45.0% | |
GACTGAAATGATGCCGGAAA+TGG | + | chr5.1:48397859-48397878 | None:intergenic | 45.0% | |
GAGCCATAGTCAACAATGGA+AGG | + | chr5.1:48401246-48401265 | None:intergenic | 45.0% | |
GAGCCATAGTCTACAATGGA+AGG | + | chr5.1:48401354-48401373 | None:intergenic | 45.0% | |
GAGTTGTGGTTGCTTCTTGT+TGG | - | chr5.1:48401569-48401588 | MS.gene010231:CDS | 45.0% | |
GATCTTGCCGAAGCTTAACT+TGG | - | chr5.1:48398094-48398113 | MS.gene010231:intron | 45.0% | |
GATGACATTGTTTCAGCCTC+AGG | - | chr5.1:48398532-48398551 | MS.gene010231:intron | 45.0% | |
GCAAAGGTTGTGACCCAATT+TGG | - | chr5.1:48400669-48400688 | MS.gene010231:intron | 45.0% | |
GCAAGATCAAGTCAACGCAA+GGG | + | chr5.1:48398082-48398101 | None:intergenic | 45.0% | |
GCACGAATTCTGCCAATAGT+AGG | + | chr5.1:48400602-48400621 | None:intergenic | 45.0% | |
GCAGTCAATGTCCAAATGCT+TGG | + | chr5.1:48401870-48401889 | None:intergenic | 45.0% | |
GGAAGAGCCATAGTCAACAA+TGG | + | chr5.1:48401250-48401269 | None:intergenic | 45.0% | |
GGAAGAGCCATAGTCTACAA+TGG | + | chr5.1:48401358-48401377 | None:intergenic | 45.0% | |
GGAATTGGCGGTGAAAAACA+TGG | - | chr5.1:48398364-48398383 | MS.gene010231:intron | 45.0% | |
GGAGGTCATATGTAAGACCA+AGG | + | chr5.1:48401333-48401352 | None:intergenic | 45.0% | |
GGGGACTATTAGAGACTAGT+TGG | - | chr5.1:48401698-48401717 | MS.gene010231:CDS | 45.0% | |
GTAAGAGAGAAGCTTCATGC+AGG | - | chr5.1:48401896-48401915 | MS.gene010231:CDS | 45.0% | |
GTTGGAATATGCCGGAAAAG+TGG | - | chr5.1:48398308-48398327 | MS.gene010231:intron | 45.0% | |
TACCAATCTGTCCTTCAGTG+AGG | + | chr5.1:48399890-48399909 | None:intergenic | 45.0% | |
TAGCTTCGGAATCTTGACTG+AGG | + | chr5.1:48397748-48397767 | None:intergenic | 45.0% | |
TCACGCACACATTGTTGAGT+TGG | - | chr5.1:48400047-48400066 | MS.gene010231:intron | 45.0% | |
TCAGCCTCGAATTCGTTTGT+TGG | - | chr5.1:48400516-48400535 | MS.gene010231:intron | 45.0% | |
TCAGCTGGGAAGATATTCGT+TGG | - | chr5.1:48398290-48398309 | MS.gene010231:intron | 45.0% | |
TCGCAAACCCTAAGAATTGG+GGG | + | chr5.1:48399483-48399502 | None:intergenic | 45.0% | |
TCTAATAGTCCCCCTCAAGT+TGG | + | chr5.1:48401691-48401710 | None:intergenic | 45.0% | |
TCTCTGCTGCAACCTACTAT+TGG | - | chr5.1:48400587-48400606 | MS.gene010231:intron | 45.0% | |
TCTTTCATGGAACACAGGGT+TGG | + | chr5.1:48401846-48401865 | None:intergenic | 45.0% | |
TGAACACCTTCCAACTTGAG+GGG | - | chr5.1:48401678-48401697 | MS.gene010231:CDS | 45.0% | |
TGACATTGTTTCAGCCTCAG+GGG | - | chr5.1:48398534-48398553 | MS.gene010231:intron | 45.0% | |
TGCCAAGGATTGACACAGTT+TGG | + | chr5.1:48397548-48397567 | None:intergenic | 45.0% | |
TGTCCTGTTAAGTGATACCG+GGG | - | chr5.1:48397647-48397666 | MS.gene010231:intron | 45.0% | |
TTGATGCTCCTTCCTTCCAT+TGG | - | chr5.1:48401537-48401556 | MS.gene010231:CDS | 45.0% | |
! | AGAAGAATTGGGTGTCATGG+GGG | + | chr5.1:48398892-48398911 | None:intergenic | 45.0% |
! | AGTTGCTCTTTGGAGGAAAC+TGG | + | chr5.1:48401938-48401957 | None:intergenic | 45.0% |
! | ATATCTGAGATTGTCCCCTG+AGG | + | chr5.1:48398551-48398570 | None:intergenic | 45.0% |
! | CAGAAGAATTGGGTGTCATG+GGG | + | chr5.1:48398893-48398912 | None:intergenic | 45.0% |
! | CCAAGAGACACCTTTTCAGT+AGG | - | chr5.1:48398201-48398220 | MS.gene010231:intron | 45.0% |
! | CCTCCTTCCATTGTTGACTA+TGG | - | chr5.1:48401240-48401259 | MS.gene010231:intron | 45.0% |
! | CTTGGATTGCTTGGAAGCAT+TGG | - | chr5.1:48401016-48401035 | MS.gene010231:intron | 45.0% |
! | GCTTGAAGGCAATTTTCGGT+TGG | - | chr5.1:48400786-48400805 | MS.gene010231:intron | 45.0% |
! | GTTGCTCTTTGGAGGAAACT+GGG | + | chr5.1:48401937-48401956 | None:intergenic | 45.0% |
! | TGGTTTTTCTTGTCTCGGCT+CGG | - | chr5.1:48401277-48401296 | MS.gene010231:intron | 45.0% |
!! | CAAGAGGTTGTGTTGCTTCT+TGG | + | chr5.1:48398937-48398956 | None:intergenic | 45.0% |
!! | CCTACTGAAAAGGTGTCTCT+TGG | + | chr5.1:48398204-48398223 | None:intergenic | 45.0% |
!! | CTGTTACCTTCCCACTTTTC+CGG | + | chr5.1:48398322-48398341 | None:intergenic | 45.0% |
!! | GAAGCGTGTTGATTGAGATG+TGG | - | chr5.1:48400383-48400402 | MS.gene010231:intron | 45.0% |
!! | GACAAGGTTGGTCTCTTCTT+TGG | - | chr5.1:48400361-48400380 | MS.gene010231:intron | 45.0% |
!!! | GAAGCATTGGTTTTGGCCTA+TGG | - | chr5.1:48401029-48401048 | MS.gene010231:intron | 45.0% |
!!! | TTTCGGTTGGTTTTCCTTGC+TGG | - | chr5.1:48400799-48400818 | MS.gene010231:intron | 45.0% |
ACCTGAAGCATGCGCCAATT+AGG | + | chr5.1:48398596-48398615 | None:intergenic | 50.0% | |
ACTTCTCCTCACTCCCGTAA+CGG | - | chr5.1:48397923-48397942 | MS.gene010231:intron | 50.0% | |
AGAGAAGGCGGTTATGGATG+CGG | - | chr5.1:48398340-48398359 | MS.gene010231:intron | 50.0% | |
AGTCCAATGCAATGCTGGAG+TGG | + | chr5.1:48399925-48399944 | None:intergenic | 50.0% | |
ATGATGCCGGAAATGGAAGG+AGG | + | chr5.1:48397852-48397871 | None:intergenic | 50.0% | |
CAGCAGAGAGTTGTACAACC+AGG | + | chr5.1:48400576-48400595 | None:intergenic | 50.0% | |
CAGTACACGCATATCTACCG+CGG | - | chr5.1:48398173-48398192 | MS.gene010231:intron | 50.0% | |
CCTGAAGCATGCGCCAATTA+GGG | + | chr5.1:48398595-48398614 | None:intergenic | 50.0% | |
CTCTCCGTCACTGACATTCA+TGG | - | chr5.1:48398140-48398159 | MS.gene010231:intron | 50.0% | |
CTGGAGGAGCTTCTTGTTCA+TGG | + | chr5.1:48397959-48397978 | None:intergenic | 50.0% | |
GAACACCTTCCAACTTGAGG+GGG | - | chr5.1:48401679-48401698 | MS.gene010231:CDS | 50.0% | |
GAGCTTCTTGTTCATGGCCA+TGG | + | chr5.1:48397953-48397972 | None:intergenic | 50.0% | |
GCAAGGTTGAGCTGAAACCA+TGG | + | chr5.1:48399040-48399059 | None:intergenic | 50.0% | |
GGCAAGATCAAGTCAACGCA+AGG | + | chr5.1:48398083-48398102 | None:intergenic | 50.0% | |
GGTAACAGAGAAGGCGGTTA+TGG | - | chr5.1:48398334-48398353 | MS.gene010231:intron | 50.0% | |
GGTGTCTCTTGGATTTACCG+CGG | + | chr5.1:48398193-48398212 | None:intergenic | 50.0% | |
GGTTATGGATGCGGTGGAAT+TGG | - | chr5.1:48398349-48398368 | MS.gene010231:intron | 50.0% | |
GTCCTCACTGAAGGACAGAT+TGG | - | chr5.1:48399885-48399904 | MS.gene010231:intron | 50.0% | |
GTTCCACTCCAGCATTGCAT+TGG | - | chr5.1:48399919-48399938 | MS.gene010231:intron | 50.0% | |
TACGGGAGTGAGGAGAAGTT+TGG | + | chr5.1:48397922-48397941 | None:intergenic | 50.0% | |
TATGCGTGTACTGCCAGACT+CGG | + | chr5.1:48398166-48398185 | None:intergenic | 50.0% | |
TATGGATGCGGTGGAATTGG+CGG | - | chr5.1:48398352-48398371 | MS.gene010231:intron | 50.0% | |
TCGGCCATGAATGTCAGTGA+CGG | + | chr5.1:48398147-48398166 | None:intergenic | 50.0% | |
TGAACAAGAAGCTCCTCCAG+AGG | - | chr5.1:48397959-48397978 | MS.gene010231:intron | 50.0% | |
TGCCAAGGATTGACACGGTT+TGG | + | chr5.1:48402353-48402372 | None:intergenic | 50.0% | |
TGGAGAGAACGAAGTTGCGA+TGG | + | chr5.1:48399451-48399470 | None:intergenic | 50.0% | |
TGGGAAGGTAACAGAGAAGG+CGG | - | chr5.1:48398328-48398347 | MS.gene010231:intron | 50.0% | |
! | GACACCTTTTCAGTAGGGGA+TGG | - | chr5.1:48398207-48398226 | MS.gene010231:intron | 50.0% |
! | GAGCTCTAGCATGCTGTTCT+TGG | - | chr5.1:48400998-48401017 | MS.gene010231:intron | 50.0% |
! | GTGTGTTTATGGAGGTACGG+AGG | - | chr5.1:48400538-48400557 | MS.gene010231:intron | 50.0% |
! | GTTTATGGAGGTACGGAGGA+TGG | - | chr5.1:48400542-48400561 | MS.gene010231:intron | 50.0% |
!! | ATAGTCCCCCTCAAGTTGGA+AGG | + | chr5.1:48401687-48401706 | None:intergenic | 50.0% |
!! | CTGCCAGATTTTGGTAGGGA+TGG | + | chr5.1:48397712-48397731 | None:intergenic | 50.0% |
!! | TTCTTGTCTCGGCTTGGCAT+AGG | - | chr5.1:48401139-48401158 | MS.gene010231:intron | 50.0% |
ACAGAGCTCTCAGCACGTCT+AGG | + | chr5.1:48397630-48397649 | None:intergenic | 55.0% | |
ACCGTGTCAATCCTTGGCAG+TGG | - | chr5.1:48402354-48402373 | MS.gene010231:CDS | 55.0% | |
ATGGCCATGGCCATCCGTTA+CGG | + | chr5.1:48397940-48397959 | None:intergenic | 55.0% | |
CCCTAATTGGCGCATGCTTC+AGG | - | chr5.1:48398592-48398611 | MS.gene010231:intron | 55.0% | |
CTGACATTCATGGCCGAGTC+TGG | - | chr5.1:48398150-48398169 | MS.gene010231:intron | 55.0% | |
GCTCCCCGGTATCACTTAAC+AGG | + | chr5.1:48397653-48397672 | None:intergenic | 55.0% | |
TGCTTCGGAATGTAGCTCCC+CGG | + | chr5.1:48397667-48397686 | None:intergenic | 55.0% | |
! | CGGAGGATGGTTTGTGTTCC+TGG | - | chr5.1:48400555-48400574 | MS.gene010231:intron | 55.0% |
!! | GTGACGGAGAGTGTCTGAGA+TGG | + | chr5.1:48398131-48398150 | None:intergenic | 55.0% |
!! | TTCTTGTCTCGGCTCGGCAT+AGG | - | chr5.1:48401283-48401302 | MS.gene010231:CDS | 55.0% |
!! | TTGTCTCGGCTTGGCATAGG+AGG | - | chr5.1:48401142-48401161 | MS.gene010231:intron | 55.0% |
AGAGGTTCCTGCCGAAGACG+AGG | - | chr5.1:48397977-48397996 | MS.gene010231:intron | 60.0% | |
GAAGGCGGTTATGGATGCGG+TGG | - | chr5.1:48398343-48398362 | MS.gene010231:intron | 60.0% | |
GTTCCTGCCGAAGACGAGGA+TGG | - | chr5.1:48397981-48398000 | MS.gene010231:intron | 60.0% | |
TAGCCATCCTCGTCTTCGGC+AGG | + | chr5.1:48397987-48398006 | None:intergenic | 60.0% | |
TCGTCTTCGGCAGGAACCTC+TGG | + | chr5.1:48397978-48397997 | None:intergenic | 60.0% | |
TCTTCGGCAGGAACCTCTGG+AGG | + | chr5.1:48397975-48397994 | None:intergenic | 60.0% | |
TGGCCATGGCCATCCGTTAC+GGG | + | chr5.1:48397939-48397958 | None:intergenic | 60.0% | |
! | CTCCTCACTCCCGTAACGGA+TGG | - | chr5.1:48397927-48397946 | MS.gene010231:intron | 60.0% |
!! | ACTCCCGTAACGGATGGCCA+TGG | - | chr5.1:48397933-48397952 | MS.gene010231:intron | 60.0% |
!! | TGTCTCGGCTCGGCATAGGA+GGG | - | chr5.1:48401287-48401306 | MS.gene010231:CDS | 60.0% |
!! | TTGTCTCGGCTCGGCATAGG+AGG | - | chr5.1:48401286-48401305 | MS.gene010231:CDS | 60.0% |
GGCCATCCGTTACGGGAGTG+AGG | + | chr5.1:48397932-48397951 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 48397522 | 48402373 | 48397522 | ID=MS.gene010231 |
chr5.1 | mRNA | 48397522 | 48402373 | 48397522 | ID=MS.gene010231.t1;Parent=MS.gene010231 |
chr5.1 | exon | 48401282 | 48402373 | 48401282 | ID=MS.gene010231.t1.exon1;Parent=MS.gene010231.t1 |
chr5.1 | CDS | 48401282 | 48402373 | 48401282 | ID=cds.MS.gene010231.t1;Parent=MS.gene010231.t1 |
chr5.1 | exon | 48397522 | 48397578 | 48397522 | ID=MS.gene010231.t1.exon2;Parent=MS.gene010231.t1 |
chr5.1 | CDS | 48397522 | 48397578 | 48397522 | ID=cds.MS.gene010231.t1;Parent=MS.gene010231.t1 |
Gene Sequence |
Protein sequence |