Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010332.t1 | XP_003611714.1 | 94.2 | 311 | 17 | 1 | 38 | 347 | 34 | 344 | 4.90E-152 | 547.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010332.t1 | Q9FUA4 | 51.8 | 226 | 82 | 5 | 74 | 296 | 156 | 357 | 1.0e-41 | 172.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010332.t1 | G7K6L5 | 94.2 | 311 | 17 | 1 | 38 | 347 | 34 | 344 | 3.6e-152 | 547.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene010332.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010332.t1 | MTR_5g017040 | 94.627 | 335 | 17 | 1 | 14 | 347 | 10 | 344 | 0.0 | 601 |
MS.gene010332.t1 | MTR_1g019240 | 81.319 | 91 | 16 | 1 | 97 | 186 | 73 | 163 | 3.97e-42 | 147 |
MS.gene010332.t1 | MTR_1g084980 | 57.983 | 119 | 49 | 1 | 79 | 197 | 434 | 551 | 1.65e-33 | 131 |
MS.gene010332.t1 | MTR_7g099540 | 60.345 | 116 | 39 | 3 | 72 | 183 | 213 | 325 | 6.52e-32 | 124 |
MS.gene010332.t1 | MTR_7g099540 | 57.500 | 120 | 42 | 3 | 72 | 183 | 213 | 331 | 7.30e-30 | 119 |
MS.gene010332.t1 | MTR_1g069155 | 59.813 | 107 | 38 | 3 | 77 | 183 | 289 | 390 | 2.05e-29 | 118 |
MS.gene010332.t1 | MTR_3g449770 | 48.551 | 138 | 60 | 5 | 109 | 243 | 310 | 439 | 2.85e-26 | 109 |
MS.gene010332.t1 | MTR_7g111320 | 55.140 | 107 | 42 | 1 | 104 | 204 | 428 | 534 | 3.81e-24 | 103 |
MS.gene010332.t1 | MTR_7g110810 | 50.549 | 91 | 42 | 1 | 88 | 178 | 185 | 272 | 5.01e-22 | 95.9 |
MS.gene010332.t1 | MTR_4g131160 | 35.664 | 143 | 72 | 2 | 33 | 172 | 135 | 260 | 3.04e-19 | 88.2 |
MS.gene010332.t1 | MTR_4g131160 | 36.029 | 136 | 67 | 2 | 40 | 172 | 145 | 263 | 8.35e-19 | 87.0 |
MS.gene010332.t1 | MTR_1g080890 | 53.030 | 66 | 31 | 0 | 107 | 172 | 192 | 257 | 3.02e-17 | 82.0 |
MS.gene010332.t1 | MTR_1g084980 | 48.387 | 93 | 44 | 2 | 79 | 171 | 434 | 522 | 3.52e-16 | 80.1 |
MS.gene010332.t1 | MTR_5g005110 | 44.048 | 84 | 45 | 1 | 101 | 184 | 219 | 300 | 1.26e-15 | 77.0 |
MS.gene010332.t1 | MTR_8g099880 | 32.353 | 170 | 86 | 8 | 95 | 243 | 135 | 296 | 1.21e-14 | 74.3 |
MS.gene010332.t1 | MTR_3g498825 | 41.758 | 91 | 48 | 3 | 94 | 183 | 136 | 222 | 1.71e-13 | 70.9 |
MS.gene010332.t1 | MTR_3g103030 | 39.535 | 86 | 50 | 1 | 98 | 183 | 221 | 304 | 3.54e-13 | 69.7 |
MS.gene010332.t1 | MTR_1g106480 | 37.000 | 100 | 51 | 2 | 76 | 172 | 43 | 133 | 4.72e-13 | 66.6 |
MS.gene010332.t1 | MTR_1g106470 | 37.179 | 78 | 49 | 0 | 107 | 184 | 195 | 272 | 6.11e-13 | 68.9 |
MS.gene010332.t1 | MTR_3g116770 | 49.231 | 65 | 32 | 1 | 110 | 173 | 193 | 257 | 6.49e-13 | 69.7 |
MS.gene010332.t1 | MTR_3g116770 | 49.231 | 65 | 32 | 1 | 110 | 173 | 193 | 257 | 6.82e-13 | 69.3 |
MS.gene010332.t1 | MTR_1g018090 | 40.244 | 82 | 47 | 1 | 102 | 183 | 270 | 349 | 9.81e-13 | 68.9 |
MS.gene010332.t1 | MTR_7g053410 | 49.231 | 65 | 32 | 1 | 110 | 173 | 319 | 383 | 1.13e-12 | 69.3 |
MS.gene010332.t1 | MTR_7g053410 | 49.231 | 65 | 32 | 1 | 110 | 173 | 319 | 383 | 1.21e-12 | 69.3 |
MS.gene010332.t1 | MTR_8g065740 | 49.231 | 65 | 32 | 1 | 110 | 173 | 307 | 371 | 1.22e-12 | 68.9 |
MS.gene010332.t1 | MTR_8g012290 | 49.231 | 65 | 32 | 1 | 110 | 173 | 293 | 357 | 1.79e-12 | 68.6 |
MS.gene010332.t1 | MTR_8g012290 | 49.231 | 65 | 32 | 1 | 110 | 173 | 293 | 357 | 1.82e-12 | 68.6 |
MS.gene010332.t1 | MTR_8g062240 | 46.154 | 65 | 34 | 1 | 110 | 173 | 153 | 217 | 1.96e-12 | 67.0 |
MS.gene010332.t1 | MTR_1g017350 | 47.692 | 65 | 33 | 1 | 110 | 173 | 262 | 326 | 2.83e-12 | 67.8 |
MS.gene010332.t1 | MTR_1g017350 | 47.692 | 65 | 33 | 1 | 110 | 173 | 262 | 326 | 3.10e-12 | 67.8 |
MS.gene010332.t1 | MTR_4g070320 | 47.692 | 65 | 33 | 1 | 110 | 173 | 145 | 209 | 3.31e-12 | 67.0 |
MS.gene010332.t1 | MTR_1g017350 | 47.692 | 65 | 33 | 1 | 110 | 173 | 262 | 326 | 3.32e-12 | 67.4 |
MS.gene010332.t1 | MTR_1g017350 | 47.692 | 65 | 33 | 1 | 110 | 173 | 262 | 326 | 3.50e-12 | 67.4 |
MS.gene010332.t1 | MTR_1g106460 | 40.000 | 70 | 42 | 0 | 115 | 184 | 245 | 314 | 3.53e-12 | 67.0 |
MS.gene010332.t1 | MTR_5g037250 | 38.384 | 99 | 58 | 2 | 76 | 173 | 82 | 178 | 4.36e-12 | 65.5 |
MS.gene010332.t1 | MTR_5g048860 | 47.692 | 65 | 33 | 1 | 110 | 173 | 367 | 431 | 9.17e-12 | 66.6 |
MS.gene010332.t1 | MTR_1g070870 | 43.590 | 78 | 44 | 0 | 95 | 172 | 110 | 187 | 5.13e-11 | 63.2 |
MS.gene010332.t1 | MTR_1g070870 | 43.590 | 78 | 44 | 0 | 95 | 172 | 107 | 184 | 5.14e-11 | 63.2 |
MS.gene010332.t1 | MTR_1g072320 | 41.975 | 81 | 41 | 1 | 100 | 174 | 446 | 526 | 5.73e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010332.t1 | AT4G36930 | 49.099 | 222 | 86 | 5 | 78 | 296 | 160 | 357 | 2.87e-47 | 164 |
MS.gene010332.t1 | AT5G67110 | 52.381 | 168 | 57 | 5 | 16 | 181 | 14 | 160 | 3.93e-37 | 133 |
MS.gene010332.t1 | AT1G09530 | 60.177 | 113 | 40 | 3 | 82 | 191 | 311 | 421 | 1.56e-31 | 124 |
MS.gene010332.t1 | AT1G09530 | 60.177 | 113 | 40 | 3 | 82 | 191 | 311 | 421 | 1.56e-31 | 124 |
MS.gene010332.t1 | AT1G09530 | 60.177 | 113 | 40 | 3 | 82 | 191 | 311 | 421 | 1.56e-31 | 124 |
MS.gene010332.t1 | AT1G09530 | 60.177 | 113 | 40 | 3 | 82 | 191 | 311 | 421 | 1.56e-31 | 124 |
MS.gene010332.t1 | AT1G09530 | 60.177 | 113 | 40 | 3 | 82 | 191 | 311 | 421 | 1.56e-31 | 124 |
MS.gene010332.t1 | AT1G09530 | 60.177 | 113 | 40 | 3 | 82 | 191 | 311 | 421 | 1.56e-31 | 124 |
MS.gene010332.t1 | AT2G20180 | 64.516 | 93 | 23 | 1 | 80 | 172 | 189 | 271 | 6.48e-30 | 118 |
MS.gene010332.t1 | AT2G20180 | 64.516 | 93 | 23 | 1 | 80 | 172 | 189 | 271 | 6.48e-30 | 118 |
MS.gene010332.t1 | AT2G20180 | 64.516 | 93 | 23 | 1 | 80 | 172 | 189 | 271 | 6.48e-30 | 118 |
MS.gene010332.t1 | AT2G20180 | 64.516 | 93 | 23 | 1 | 80 | 172 | 260 | 342 | 1.77e-29 | 118 |
MS.gene010332.t1 | AT2G20180 | 64.516 | 93 | 23 | 1 | 80 | 172 | 260 | 342 | 1.77e-29 | 118 |
MS.gene010332.t1 | AT2G20180 | 64.516 | 93 | 23 | 1 | 80 | 172 | 260 | 342 | 1.77e-29 | 118 |
MS.gene010332.t1 | AT2G20180 | 64.516 | 93 | 23 | 1 | 80 | 172 | 260 | 342 | 1.77e-29 | 118 |
MS.gene010332.t1 | AT2G20180 | 64.444 | 90 | 22 | 1 | 80 | 169 | 260 | 339 | 3.01e-28 | 112 |
MS.gene010332.t1 | AT4G00050 | 50.862 | 116 | 49 | 3 | 61 | 174 | 62 | 171 | 6.53e-27 | 108 |
MS.gene010332.t1 | AT4G00050 | 55.340 | 103 | 41 | 2 | 74 | 174 | 174 | 273 | 1.87e-26 | 108 |
MS.gene010332.t1 | AT4G00050 | 55.340 | 103 | 41 | 2 | 74 | 174 | 174 | 273 | 2.34e-26 | 108 |
MS.gene010332.t1 | AT4G28800 | 43.382 | 136 | 72 | 4 | 48 | 181 | 189 | 321 | 6.80e-23 | 99.4 |
MS.gene010332.t1 | AT2G46970 | 44.248 | 113 | 59 | 1 | 103 | 215 | 187 | 295 | 3.21e-22 | 96.7 |
MS.gene010332.t1 | AT2G46970 | 44.248 | 113 | 59 | 1 | 103 | 215 | 196 | 304 | 3.71e-22 | 96.7 |
MS.gene010332.t1 | AT2G46970 | 44.248 | 113 | 59 | 1 | 103 | 215 | 218 | 326 | 4.25e-22 | 96.7 |
MS.gene010332.t1 | AT4G28815 | 37.162 | 148 | 75 | 5 | 108 | 249 | 68 | 203 | 2.81e-21 | 91.3 |
MS.gene010332.t1 | AT4G28815 | 37.162 | 148 | 75 | 5 | 108 | 249 | 144 | 279 | 7.86e-21 | 91.7 |
MS.gene010332.t1 | AT4G28790 | 50.962 | 104 | 47 | 3 | 80 | 183 | 246 | 345 | 1.07e-20 | 92.8 |
MS.gene010332.t1 | AT3G59060 | 58.427 | 89 | 30 | 2 | 109 | 191 | 251 | 338 | 1.20e-20 | 92.8 |
MS.gene010332.t1 | AT3G59060 | 58.427 | 89 | 30 | 2 | 109 | 191 | 251 | 338 | 1.20e-20 | 92.8 |
MS.gene010332.t1 | AT3G59060 | 58.427 | 89 | 30 | 2 | 109 | 191 | 251 | 338 | 1.20e-20 | 92.8 |
MS.gene010332.t1 | AT3G59060 | 58.427 | 89 | 30 | 2 | 109 | 191 | 251 | 338 | 1.33e-20 | 92.8 |
MS.gene010332.t1 | AT4G28800 | 43.902 | 123 | 65 | 3 | 48 | 168 | 201 | 321 | 1.63e-20 | 92.4 |
MS.gene010332.t1 | AT2G24260 | 60.317 | 63 | 25 | 0 | 110 | 172 | 37 | 99 | 6.22e-20 | 88.2 |
MS.gene010332.t1 | AT2G43010 | 75.806 | 62 | 15 | 0 | 109 | 170 | 252 | 313 | 1.07e-19 | 90.1 |
MS.gene010332.t1 | AT2G43010 | 75.806 | 62 | 15 | 0 | 109 | 170 | 252 | 313 | 1.08e-19 | 90.1 |
MS.gene010332.t1 | AT2G43010 | 75.806 | 62 | 15 | 0 | 109 | 170 | 252 | 313 | 1.14e-19 | 89.7 |
MS.gene010332.t1 | AT2G43010 | 75.806 | 62 | 15 | 0 | 109 | 170 | 259 | 320 | 1.21e-19 | 89.7 |
MS.gene010332.t1 | AT4G30980 | 37.778 | 135 | 71 | 2 | 38 | 172 | 73 | 194 | 1.57e-19 | 88.2 |
MS.gene010332.t1 | AT2G43010 | 75.806 | 62 | 15 | 0 | 109 | 170 | 294 | 355 | 1.61e-19 | 89.7 |
MS.gene010332.t1 | AT2G24260 | 60.317 | 63 | 25 | 0 | 110 | 172 | 140 | 202 | 1.76e-19 | 88.6 |
MS.gene010332.t1 | AT5G58010 | 57.576 | 66 | 28 | 0 | 107 | 172 | 98 | 163 | 1.83e-19 | 87.8 |
MS.gene010332.t1 | AT4G28790 | 54.255 | 94 | 40 | 2 | 80 | 173 | 246 | 336 | 1.89e-19 | 88.2 |
MS.gene010332.t1 | AT4G30980 | 37.778 | 135 | 71 | 2 | 38 | 172 | 121 | 242 | 2.21e-19 | 88.6 |
MS.gene010332.t1 | AT5G67110 | 41.071 | 168 | 54 | 6 | 16 | 181 | 14 | 138 | 5.43e-18 | 81.3 |
MS.gene010332.t1 | AT5G61270 | 58.333 | 72 | 30 | 0 | 105 | 176 | 69 | 140 | 3.65e-17 | 80.9 |
MS.gene010332.t1 | AT5G61270 | 58.333 | 72 | 30 | 0 | 105 | 176 | 69 | 140 | 3.65e-17 | 80.9 |
MS.gene010332.t1 | AT5G61270 | 58.333 | 72 | 30 | 0 | 105 | 176 | 157 | 228 | 6.33e-17 | 81.3 |
MS.gene010332.t1 | AT3G62090 | 36.571 | 175 | 82 | 6 | 99 | 249 | 173 | 342 | 1.55e-16 | 80.1 |
MS.gene010332.t1 | AT3G62090 | 45.833 | 96 | 45 | 1 | 99 | 187 | 156 | 251 | 1.58e-16 | 80.1 |
MS.gene010332.t1 | AT5G67110 | 41.667 | 144 | 61 | 5 | 16 | 157 | 14 | 136 | 5.64e-16 | 74.7 |
MS.gene010332.t1 | AT1G25330 | 35.897 | 117 | 64 | 2 | 110 | 215 | 106 | 222 | 9.54e-16 | 75.9 |
MS.gene010332.t1 | AT4G28811 | 57.500 | 80 | 34 | 0 | 92 | 171 | 335 | 414 | 1.04e-14 | 75.5 |
MS.gene010332.t1 | AT1G26260 | 37.736 | 106 | 50 | 2 | 84 | 173 | 184 | 289 | 2.36e-14 | 73.9 |
MS.gene010332.t1 | AT1G26260 | 37.736 | 106 | 50 | 2 | 84 | 173 | 184 | 289 | 2.36e-14 | 73.9 |
MS.gene010332.t1 | AT1G26260 | 37.736 | 106 | 50 | 2 | 84 | 173 | 184 | 289 | 2.36e-14 | 73.9 |
MS.gene010332.t1 | AT1G26260 | 37.736 | 106 | 50 | 2 | 84 | 173 | 184 | 289 | 2.36e-14 | 73.9 |
MS.gene010332.t1 | AT1G02340 | 35.616 | 146 | 66 | 5 | 84 | 229 | 116 | 233 | 2.50e-14 | 72.8 |
MS.gene010332.t1 | AT1G26260 | 37.736 | 106 | 50 | 2 | 84 | 173 | 162 | 267 | 2.52e-14 | 73.6 |
MS.gene010332.t1 | AT1G26260 | 37.736 | 106 | 50 | 2 | 84 | 173 | 133 | 238 | 2.58e-14 | 73.6 |
MS.gene010332.t1 | AT1G02340 | 35.616 | 146 | 66 | 5 | 84 | 229 | 123 | 240 | 2.59e-14 | 72.8 |
MS.gene010332.t1 | AT4G33880 | 40.217 | 92 | 50 | 2 | 96 | 184 | 253 | 342 | 3.49e-14 | 73.2 |
MS.gene010332.t1 | AT1G27740 | 37.374 | 99 | 57 | 2 | 100 | 195 | 161 | 257 | 6.99e-14 | 71.2 |
MS.gene010332.t1 | AT5G50915 | 39.091 | 110 | 53 | 4 | 87 | 186 | 109 | 214 | 1.76e-13 | 70.1 |
MS.gene010332.t1 | AT5G50915 | 39.091 | 110 | 53 | 4 | 87 | 186 | 109 | 214 | 1.76e-13 | 70.1 |
MS.gene010332.t1 | AT5G50915 | 36.424 | 151 | 78 | 7 | 87 | 223 | 109 | 255 | 1.77e-13 | 70.5 |
MS.gene010332.t1 | AT5G50915 | 36.424 | 151 | 78 | 7 | 87 | 223 | 109 | 255 | 1.77e-13 | 70.5 |
MS.gene010332.t1 | AT1G68920 | 39.316 | 117 | 58 | 4 | 110 | 224 | 304 | 409 | 2.13e-13 | 71.2 |
MS.gene010332.t1 | AT1G68920 | 39.316 | 117 | 58 | 4 | 110 | 224 | 305 | 410 | 2.16e-13 | 71.2 |
MS.gene010332.t1 | AT1G68920 | 39.316 | 117 | 58 | 4 | 110 | 224 | 305 | 410 | 2.16e-13 | 71.2 |
MS.gene010332.t1 | AT1G68920 | 39.316 | 117 | 58 | 4 | 110 | 224 | 305 | 410 | 2.16e-13 | 71.2 |
MS.gene010332.t1 | AT5G43175 | 36.957 | 92 | 55 | 1 | 107 | 195 | 131 | 222 | 3.17e-13 | 68.6 |
MS.gene010332.t1 | AT3G07340 | 42.268 | 97 | 52 | 3 | 79 | 173 | 230 | 324 | 3.87e-13 | 70.5 |
MS.gene010332.t1 | AT2G14760 | 39.506 | 81 | 47 | 1 | 104 | 184 | 235 | 313 | 4.32e-13 | 69.7 |
MS.gene010332.t1 | AT3G07340 | 42.268 | 97 | 52 | 3 | 79 | 173 | 230 | 324 | 5.00e-13 | 70.1 |
MS.gene010332.t1 | AT5G48560 | 49.231 | 65 | 32 | 1 | 110 | 173 | 303 | 367 | 1.36e-12 | 68.9 |
MS.gene010332.t1 | AT4G36540 | 47.692 | 65 | 33 | 1 | 110 | 173 | 143 | 207 | 1.41e-12 | 67.8 |
MS.gene010332.t1 | AT4G36540 | 47.692 | 65 | 33 | 1 | 110 | 173 | 143 | 207 | 1.41e-12 | 67.8 |
MS.gene010332.t1 | AT5G48560 | 49.231 | 65 | 32 | 1 | 110 | 173 | 303 | 367 | 1.51e-12 | 68.9 |
MS.gene010332.t1 | AT5G62610 | 39.604 | 101 | 52 | 4 | 110 | 201 | 155 | 255 | 1.55e-12 | 67.4 |
MS.gene010332.t1 | AT5G62610 | 39.604 | 101 | 52 | 4 | 110 | 201 | 155 | 255 | 1.55e-12 | 67.4 |
MS.gene010332.t1 | AT2G14760 | 41.791 | 67 | 39 | 0 | 117 | 183 | 259 | 325 | 1.69e-12 | 68.2 |
MS.gene010332.t1 | AT2G18300 | 47.692 | 65 | 33 | 1 | 110 | 173 | 187 | 251 | 2.47e-12 | 67.4 |
MS.gene010332.t1 | AT2G18300 | 47.692 | 65 | 33 | 1 | 110 | 173 | 187 | 251 | 2.50e-12 | 67.4 |
MS.gene010332.t1 | AT4G34530 | 44.615 | 65 | 35 | 1 | 110 | 173 | 174 | 238 | 3.00e-12 | 67.4 |
MS.gene010332.t1 | AT2G18300 | 47.692 | 65 | 33 | 1 | 110 | 173 | 187 | 251 | 3.04e-12 | 67.4 |
MS.gene010332.t1 | AT3G23690 | 35.922 | 103 | 62 | 2 | 72 | 173 | 158 | 257 | 4.02e-12 | 67.0 |
MS.gene010332.t1 | AT1G59640 | 46.154 | 65 | 34 | 1 | 110 | 173 | 138 | 202 | 4.19e-12 | 66.2 |
MS.gene010332.t1 | AT1G59640 | 44.737 | 76 | 39 | 2 | 99 | 173 | 129 | 202 | 4.58e-12 | 66.6 |
MS.gene010332.t1 | AT1G10120 | 44.304 | 79 | 41 | 2 | 96 | 173 | 196 | 272 | 5.08e-12 | 66.6 |
MS.gene010332.t1 | AT1G10120 | 44.304 | 79 | 41 | 2 | 96 | 173 | 196 | 272 | 5.08e-12 | 66.6 |
MS.gene010332.t1 | AT1G73830 | 43.077 | 65 | 36 | 1 | 110 | 173 | 149 | 213 | 1.34e-11 | 64.7 |
MS.gene010332.t1 | AT1G73830 | 43.077 | 65 | 36 | 1 | 110 | 173 | 149 | 213 | 1.41e-11 | 64.3 |
MS.gene010332.t1 | AT1G18400 | 41.538 | 65 | 37 | 1 | 110 | 173 | 147 | 211 | 6.33e-11 | 62.4 |
MS.gene010332.t1 | AT1G18400 | 41.538 | 65 | 37 | 1 | 110 | 173 | 147 | 211 | 7.64e-11 | 62.4 |
Find 72 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGGAGCTGAAGCTGTTTA+AGG | 0.179292 | 5.4:-10231754 | None:intergenic |
TCCATCTTGAAGCTGGTTAA+TGG | 0.190515 | 5.4:-10230775 | None:intergenic |
AGAGTAGATGTCATATTTAA+AGG | 0.257417 | 5.4:-10232499 | None:intergenic |
ACAACACAGAAACTTCTTTC+GGG | 0.279808 | 5.4:+10232623 | MS.gene010332:CDS |
CAAAGTCAGCTGGTGCTTCT+AGG | 0.289683 | 5.4:+10231385 | MS.gene010332:CDS |
ACTTCTTTCGGGGTGGAATC+TGG | 0.303794 | 5.4:+10232634 | MS.gene010332:CDS |
AATTTATTGCATTCAATTGC+TGG | 0.330715 | 5.4:-10232820 | None:intergenic |
GTATGCACCTTGTTAGAGTT+TGG | 0.332014 | 5.4:-10231605 | None:intergenic |
AACAACACAGAAACTTCTTT+CGG | 0.333925 | 5.4:+10232622 | MS.gene010332:CDS |
GAAGCACCAGCTGACTTTGT+TGG | 0.365170 | 5.4:-10231381 | None:intergenic |
GGCTTACCTCTGAAGATTGT+TGG | 0.371609 | 5.4:-10232681 | None:intergenic |
AATGTATCTTCCTCTTCTGT+TGG | 0.387184 | 5.4:+10230843 | MS.gene010332:CDS |
ACTTTGCAAACTTGTGTTGC+CGG | 0.389000 | 5.4:+10233009 | MS.gene010332:CDS |
CAGATGCTGTCATTGAGAAA+TGG | 0.389953 | 5.4:+10232382 | MS.gene010332:intron |
CGCTCCTGACTGATCTCTTC+CGG | 0.402152 | 5.4:-10233028 | None:intergenic |
GAGTAGATGTCATATTTAAA+GGG | 0.403422 | 5.4:-10232498 | None:intergenic |
GATACATTTAAAGCATGGTT+TGG | 0.405835 | 5.4:-10230828 | None:intergenic |
TCTTCATCTTCTTCCATGCC+AGG | 0.415588 | 5.4:+10230750 | MS.gene010332:CDS |
TACATTCTCTGCCTTTGTCT+CGG | 0.426810 | 5.4:+10232440 | MS.gene010332:CDS |
TCCTCTTCTGTTGGAGCAGG+AGG | 0.430203 | 5.4:+10230852 | MS.gene010332:CDS |
TGCAAAGTATTGTTAGTAGT+AGG | 0.434216 | 5.4:-10232994 | None:intergenic |
TCTGTGTTGTTAATATATGA+AGG | 0.439351 | 5.4:-10232610 | None:intergenic |
AGTTCATAATTTGTCAGAAA+AGG | 0.440757 | 5.4:+10231437 | MS.gene010332:CDS |
CTGCGATGTAAATATAATGT+TGG | 0.441190 | 5.4:-10233070 | None:intergenic |
TGCGATGTAAATATAATGTT+GGG | 0.441986 | 5.4:-10233069 | None:intergenic |
TATTTACATCGCAGTTAAGT+AGG | 0.447661 | 5.4:+10233079 | MS.gene010332:CDS |
TTTAAATTTGCAGGAGGGTG+TGG | 0.452272 | 5.4:+10231338 | MS.gene010332:intron |
AACAAGTCTTCGCCGTGTAT+TGG | 0.455886 | 5.4:-10232791 | None:intergenic |
TAGATTGGATGCATAAAGTA+AGG | 0.456385 | 5.4:-10232542 | None:intergenic |
TTGAGAACCGCCTAATAGAT+TGG | 0.459843 | 5.4:-10232849 | None:intergenic |
TCTTCCTCTTCTGTTGGAGC+AGG | 0.460002 | 5.4:+10230849 | MS.gene010332:CDS |
AAAAGATACAAACCTGTACT+TGG | 0.469577 | 5.4:-10231772 | None:intergenic |
CATCCTATGTACTTTCATGA+AGG | 0.470473 | 5.4:+10232415 | MS.gene010332:CDS |
CATAAAGTAAGGAGTTGTCT+AGG | 0.474565 | 5.4:-10232531 | None:intergenic |
AGATCTTTCCATCTTGAAGC+TGG | 0.476129 | 5.4:-10230782 | None:intergenic |
GACTTGTTGAGCAGAGAAGA+AGG | 0.487830 | 5.4:+10231540 | MS.gene010332:intron |
TGAAGCTGGTTAATGGATCC+TGG | 0.492297 | 5.4:-10230768 | None:intergenic |
ACAGCTTCAGCTCCAAGTAC+AGG | 0.499989 | 5.4:+10231760 | MS.gene010332:CDS |
GCCTTTGTCTCGGATGAGTA+CGG | 0.508469 | 5.4:+10232450 | MS.gene010332:CDS |
AAGGAGTTGTCTAGGGGATG+AGG | 0.512056 | 5.4:-10232523 | None:intergenic |
TTGAGCAGAGAAGAAGGAGT+AGG | 0.520380 | 5.4:+10231546 | MS.gene010332:intron |
TCCATTAACCAGCTTCAAGA+TGG | 0.520381 | 5.4:+10230774 | MS.gene010332:CDS |
GAAGGATAGGAAGACATTGA+TGG | 0.522616 | 5.4:-10232592 | None:intergenic |
AGGAAGATACATTTAAAGCA+TGG | 0.529279 | 5.4:-10230833 | None:intergenic |
TGGTCTAGAAGTTGAATCAA+AGG | 0.533794 | 5.4:-10230808 | None:intergenic |
GTTGTTAATATATGAAGGAT+AGG | 0.536631 | 5.4:-10232605 | None:intergenic |
ATAAAGTAAGGAGTTGTCTA+GGG | 0.541699 | 5.4:-10232530 | None:intergenic |
GAAGTTCCAACAAAGTCAGC+TGG | 0.551060 | 5.4:+10231375 | MS.gene010332:CDS |
TCCTCCTGCTCCAACAGAAG+AGG | 0.551374 | 5.4:-10230853 | None:intergenic |
AGAGATTTCGTCTTGTGAAG+AGG | 0.551908 | 5.4:-10230697 | None:intergenic |
AGAATTTCAGTCGGGCGCAA+TGG | 0.555643 | 5.4:+10232966 | MS.gene010332:CDS |
AGCTGTCAAAGAATTTCAGT+CGG | 0.555801 | 5.4:+10232957 | MS.gene010332:intron |
AACATAACAACAACATGGCT+CGG | 0.564736 | 5.4:+10230658 | MS.gene010332:CDS |
GCTGTCAAAGAATTTCAGTC+GGG | 0.565127 | 5.4:+10232958 | MS.gene010332:intron |
CAACACAGAAACTTCTTTCG+GGG | 0.582522 | 5.4:+10232624 | MS.gene010332:CDS |
CACAGAAACTTCTTTCGGGG+TGG | 0.588598 | 5.4:+10232627 | MS.gene010332:CDS |
CTGGTTAATGGATCCTGGCA+TGG | 0.589932 | 5.4:-10230763 | None:intergenic |
ATGAGTACGGTGTTGAGTGA+AGG | 0.590743 | 5.4:+10232463 | MS.gene010332:CDS |
AATCTATTAGGCGGTTCTCA+AGG | 0.591562 | 5.4:+10232851 | MS.gene010332:CDS |
TGATTTGTGAAGCCAATACA+CGG | 0.610208 | 5.4:+10232779 | MS.gene010332:intron |
AAGCCTTCATGAAAGTACAT+AGG | 0.613283 | 5.4:-10232418 | None:intergenic |
AAGAAGATGAAGATGAACGA+AGG | 0.614318 | 5.4:-10230740 | None:intergenic |
ACCGTACTCATCCGAGACAA+AGG | 0.619920 | 5.4:-10232451 | None:intergenic |
GTTGCCGGAAGAGATCAGTC+AGG | 0.629530 | 5.4:+10233024 | MS.gene010332:CDS |
ACGTCTCCAACAATCTTCAG+AGG | 0.636386 | 5.4:+10232675 | MS.gene010332:CDS |
TCTAATTCCAAACTCTAACA+AGG | 0.649119 | 5.4:+10231598 | MS.gene010332:CDS |
TAAAGTAAGGAGTTGTCTAG+GGG | 0.660787 | 5.4:-10232529 | None:intergenic |
GTTGGAGCAGGAGGACTCAG+TGG | 0.665702 | 5.4:+10230861 | MS.gene010332:CDS |
CGGAAGAGATCAGTCAGGAG+CGG | 0.684799 | 5.4:+10233029 | MS.gene010332:CDS |
ACGGTGTTGAGTGAAGGAAA+CGG | 0.696048 | 5.4:+10232469 | MS.gene010332:CDS |
TGAATATGACTGTGAAAGTG+AGG | 0.701990 | 5.4:+10230896 | MS.gene010332:CDS |
AATGGAACATAACAACAACA+TGG | 0.706557 | 5.4:+10230653 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGATTAATATTGATTACAAT+TGG | + | chr5.4:10232120-10232139 | MS.gene010332:intron | 15.0% |
!!! | ATCAAAGTATTATTCTTTTT+AGG | - | chr5.4:10231211-10231230 | None:intergenic | 15.0% |
!!! | ATTTTTAAACCATAGTTTAA+AGG | + | chr5.4:10231629-10231648 | MS.gene010332:intron | 15.0% |
!!! | TAAATATTTAGTATTGATGA+CGG | - | chr5.4:10231948-10231967 | None:intergenic | 15.0% |
!!! | TTTTTAAACCATAGTTTAAA+GGG | + | chr5.4:10231630-10231649 | MS.gene010332:intron | 15.0% |
!! | AAAAAAAACCCTTTAAACTA+TGG | - | chr5.4:10231641-10231660 | None:intergenic | 20.0% |
!! | AAAAAGTAAAAATGAGTGTA+AGG | - | chr5.4:10231900-10231919 | None:intergenic | 20.0% |
!! | AAAAGTAAAAATGAGTGTAA+GGG | - | chr5.4:10231899-10231918 | None:intergenic | 20.0% |
!! | AAGAATAATACTTTGATTCT+TGG | + | chr5.4:10231214-10231233 | MS.gene010332:intron | 20.0% |
!! | ACATGAATACATAAAAAGAA+AGG | - | chr5.4:10230959-10230978 | None:intergenic | 20.0% |
!! | CTATGTAAAAAAATGAAAAG+TGG | - | chr5.4:10231870-10231889 | None:intergenic | 20.0% |
!! | TAGAATTATTCTTAATGTAG+TGG | + | chr5.4:10231671-10231690 | MS.gene010332:intron | 20.0% |
!!! | AAATATTTAGTATTGATGAC+GGG | - | chr5.4:10231947-10231966 | None:intergenic | 20.0% |
!!! | AATTCTTTTACCAATCTATT+AGG | + | chr5.4:10232839-10232858 | MS.gene010332:CDS | 20.0% |
!!! | CACTTTTCATTTTTTTACAT+AGG | + | chr5.4:10231868-10231887 | MS.gene010332:intron | 20.0% |
!!! | CTTGATTTCAATTTTATTTG+TGG | + | chr5.4:10231487-10231506 | MS.gene010332:intron | 20.0% |
!!! | TAATTTTTTACTCAATGTCT+TGG | + | chr5.4:10231076-10231095 | MS.gene010332:intron | 20.0% |
!!! | TATTGTTTGTATGTGTATTT+TGG | + | chr5.4:10231143-10231162 | MS.gene010332:intron | 20.0% |
!!! | TTCTTTTTATGTATTCATGT+GGG | + | chr5.4:10230959-10230978 | MS.gene010332:intron | 20.0% |
!!! | TTTCTTTTTATGTATTCATG+TGG | + | chr5.4:10230958-10230977 | MS.gene010332:intron | 20.0% |
! | AACATTTGAAGGATAATTAG+TGG | + | chr5.4:10232168-10232187 | MS.gene010332:intron | 25.0% |
! | AATTTATTGCATTCAATTGC+TGG | - | chr5.4:10232823-10232842 | None:intergenic | 25.0% |
! | ACTAATTATCCTTCAAATGT+TGG | - | chr5.4:10232169-10232188 | None:intergenic | 25.0% |
! | AGAGTAGATGTCATATTTAA+AGG | - | chr5.4:10232502-10232521 | None:intergenic | 25.0% |
! | ATAGCAAATTCAATCTAACA+AGG | - | chr5.4:10232313-10232332 | None:intergenic | 25.0% |
! | ATTTGAGAAGATGTAAGTAA+TGG | + | chr5.4:10232014-10232033 | MS.gene010332:intron | 25.0% |
! | GAGTAGATGTCATATTTAAA+GGG | - | chr5.4:10232501-10232520 | None:intergenic | 25.0% |
! | GTTGTTAATATATGAAGGAT+AGG | - | chr5.4:10232608-10232627 | None:intergenic | 25.0% |
! | TGCGATGTAAATATAATGTT+GGG | - | chr5.4:10233072-10233091 | None:intergenic | 25.0% |
! | TTAATGCAAGCAATAAAACA+TGG | + | chr5.4:10231115-10231134 | MS.gene010332:intron | 25.0% |
!! | AGTTCATAATTTGTCAGAAA+AGG | + | chr5.4:10231437-10231456 | MS.gene010332:CDS | 25.0% |
!! | ATTGCATCTTTTAAATTTGC+AGG | + | chr5.4:10231329-10231348 | MS.gene010332:intron | 25.0% |
!! | CACTTTTCAATTAAGCAAAT+TGG | + | chr5.4:10232213-10232232 | MS.gene010332:intron | 25.0% |
!! | TCTGTGTTGTTAATATATGA+AGG | - | chr5.4:10232613-10232632 | None:intergenic | 25.0% |
!! | TCTTTTTATGTATTCATGTG+GGG | + | chr5.4:10230960-10230979 | MS.gene010332:intron | 25.0% |
!!! | ACATCTTCTCAAATTAGTTT+TGG | - | chr5.4:10232008-10232027 | None:intergenic | 25.0% |
!!! | TAGATTGAATTTGCTATCAA+AGG | + | chr5.4:10232316-10232335 | MS.gene010332:intron | 25.0% |
!!! | TTTTGTTGGGATTTGATTTT+GGG | + | chr5.4:10231299-10231318 | MS.gene010332:intron | 25.0% |
!!! | TTTTTGTTGGGATTTGATTT+TGG | + | chr5.4:10231298-10231317 | MS.gene010332:intron | 25.0% |
AAAAGATACAAACCTGTACT+TGG | - | chr5.4:10231775-10231794 | None:intergenic | 30.0% | |
AACAACACAGAAACTTCTTT+CGG | + | chr5.4:10232622-10232641 | MS.gene010332:CDS | 30.0% | |
ACGTCTTAAATTTGAATCGT+CGG | + | chr5.4:10232089-10232108 | MS.gene010332:intron | 30.0% | |
AGAGAATTACCAACATTTGA+AGG | + | chr5.4:10232157-10232176 | MS.gene010332:intron | 30.0% | |
ATAAAGTAAGGAGTTGTCTA+GGG | - | chr5.4:10232533-10232552 | None:intergenic | 30.0% | |
ATTCTAAATACTTCTCTCGA+CGG | + | chr5.4:10232037-10232056 | MS.gene010332:intron | 30.0% | |
CTGCGATGTAAATATAATGT+TGG | - | chr5.4:10233073-10233092 | None:intergenic | 30.0% | |
TAGATTGGATGCATAAAGTA+AGG | - | chr5.4:10232545-10232564 | None:intergenic | 30.0% | |
TATTTACATCGCAGTTAAGT+AGG | + | chr5.4:10233079-10233098 | MS.gene010332:CDS | 30.0% | |
TCTAATTCCAAACTCTAACA+AGG | + | chr5.4:10231598-10231617 | MS.gene010332:CDS | 30.0% | |
TTTACTCAATGTCTTGGAAA+AGG | + | chr5.4:10231082-10231101 | MS.gene010332:intron | 30.0% | |
! | AGGAAGATACATTTAAAGCA+TGG | - | chr5.4:10230836-10230855 | None:intergenic | 30.0% |
! | ATTCAAATTTAAGACGTGTC+TGG | - | chr5.4:10232086-10232105 | None:intergenic | 30.0% |
! | ATTTTGCTTGTGGATTTTTG+TGG | + | chr5.4:10231517-10231536 | MS.gene010332:intron | 30.0% |
! | CATCTTTTAAATTTGCAGGA+GGG | + | chr5.4:10231333-10231352 | MS.gene010332:intron | 30.0% |
! | GATACATTTAAAGCATGGTT+TGG | - | chr5.4:10230831-10230850 | None:intergenic | 30.0% |
! | GGAATATTGTTGTGTTACTA+CGG | + | chr5.4:10232234-10232253 | MS.gene010332:intron | 30.0% |
! | TCTTTTACCAATCTATTAGG+CGG | + | chr5.4:10232842-10232861 | MS.gene010332:CDS | 30.0% |
! | TGGTTATGTAATTTTGCTTG+TGG | + | chr5.4:10231507-10231526 | MS.gene010332:intron | 30.0% |
! | TTTTGCTTGTGGATTTTTGT+GGG | + | chr5.4:10231518-10231537 | MS.gene010332:intron | 30.0% |
!! | TGCAAAGTATTGTTAGTAGT+AGG | - | chr5.4:10232997-10233016 | None:intergenic | 30.0% |
!! | TGTGTTTTTGTTAGGTAGAT+TGG | - | chr5.4:10232560-10232579 | None:intergenic | 30.0% |
!! | TTTGTTGGGATTTGATTTTG+GGG | + | chr5.4:10231300-10231319 | MS.gene010332:intron | 30.0% |
!!! | GTCGTTTTGTTGTTTTTGTT+GGG | + | chr5.4:10231286-10231305 | MS.gene010332:intron | 30.0% |
!!! | TGTCGTTTTGTTGTTTTTGT+TGG | + | chr5.4:10231285-10231304 | MS.gene010332:intron | 30.0% |
AAAATGAAAAGTGGAGATGC+TGG | - | chr5.4:10231861-10231880 | None:intergenic | 35.0% | |
AAATGAAAAGTGGAGATGCT+GGG | - | chr5.4:10231860-10231879 | None:intergenic | 35.0% | |
AACATAACAACAACATGGCT+CGG | + | chr5.4:10230658-10230677 | MS.gene010332:CDS | 35.0% | |
AACTGTATGTGATCCTTATG+AGG | + | chr5.4:10232353-10232372 | MS.gene010332:intron | 35.0% | |
AAGAAGATGAAGATGAACGA+AGG | - | chr5.4:10230743-10230762 | None:intergenic | 35.0% | |
AATGTATCTTCCTCTTCTGT+TGG | + | chr5.4:10230843-10230862 | MS.gene010332:CDS | 35.0% | |
AATGTCTTGGAAAAGGTTCT+TGG | + | chr5.4:10231089-10231108 | MS.gene010332:intron | 35.0% | |
ACAACACAGAAACTTCTTTC+GGG | + | chr5.4:10232623-10232642 | MS.gene010332:CDS | 35.0% | |
ACAGCTGAAGTTATGAAACA+AGG | - | chr5.4:10232943-10232962 | None:intergenic | 35.0% | |
AGCTGTCAAAGAATTTCAGT+CGG | + | chr5.4:10232957-10232976 | MS.gene010332:intron | 35.0% | |
AGTAAAAATGAGTGTAAGGG+TGG | - | chr5.4:10231896-10231915 | None:intergenic | 35.0% | |
ATAAGGATCACATACAGTTC+AGG | - | chr5.4:10232352-10232371 | None:intergenic | 35.0% | |
CATAAAGTAAGGAGTTGTCT+AGG | - | chr5.4:10232534-10232553 | None:intergenic | 35.0% | |
CATCCTATGTACTTTCATGA+AGG | + | chr5.4:10232415-10232434 | MS.gene010332:CDS | 35.0% | |
GTAAAAATGAGTGTAAGGGT+GGG | - | chr5.4:10231895-10231914 | None:intergenic | 35.0% | |
GTGAGATTGTGGTATAAAAG+TGG | - | chr5.4:10232917-10232936 | None:intergenic | 35.0% | |
TAAAGTAAGGAGTTGTCTAG+GGG | - | chr5.4:10232532-10232551 | None:intergenic | 35.0% | |
TGAATATGACTGTGAAAGTG+AGG | + | chr5.4:10230896-10230915 | MS.gene010332:CDS | 35.0% | |
TGGTCTAGAAGTTGAATCAA+AGG | - | chr5.4:10230811-10230830 | None:intergenic | 35.0% | |
! | AAGCCTTCATGAAAGTACAT+AGG | - | chr5.4:10232421-10232440 | None:intergenic | 35.0% |
! | AATACGACATTCAAGTTTGC+AGG | - | chr5.4:10232710-10232729 | None:intergenic | 35.0% |
! | ACTGCACTTTTGTCCTATTT+TGG | + | chr5.4:10231801-10231820 | MS.gene010332:intron | 35.0% |
! | CTGCACTTTTGTCCTATTTT+GGG | + | chr5.4:10231802-10231821 | MS.gene010332:intron | 35.0% |
! | GCATCTGAAATATCCTCATA+AGG | - | chr5.4:10232369-10232388 | None:intergenic | 35.0% |
! | GCATCTTTTAAATTTGCAGG+AGG | + | chr5.4:10231332-10231351 | MS.gene010332:intron | 35.0% |
! | TGATTTGTGAAGCCAATACA+CGG | + | chr5.4:10232779-10232798 | MS.gene010332:intron | 35.0% |
!! | CTCGACAATGTGTTTTTGTT+AGG | - | chr5.4:10232568-10232587 | None:intergenic | 35.0% |
!! | TTCTTGGTCTATTTCTAGTG+TGG | + | chr5.4:10231230-10231249 | MS.gene010332:intron | 35.0% |
AATCTATTAGGCGGTTCTCA+AGG | + | chr5.4:10232851-10232870 | MS.gene010332:CDS | 40.0% | |
ACTTTGCAAACTTGTGTTGC+CGG | + | chr5.4:10233009-10233028 | MS.gene010332:CDS | 40.0% | |
AGAGATTTCGTCTTGTGAAG+AGG | - | chr5.4:10230700-10230719 | None:intergenic | 40.0% | |
AGATCTTTCCATCTTGAAGC+TGG | - | chr5.4:10230785-10230804 | None:intergenic | 40.0% | |
CAACACAGAAACTTCTTTCG+GGG | + | chr5.4:10232624-10232643 | MS.gene010332:CDS | 40.0% | |
CAGATGCTGTCATTGAGAAA+TGG | + | chr5.4:10232382-10232401 | MS.gene010332:intron | 40.0% | |
GAAGGATAGGAAGACATTGA+TGG | - | chr5.4:10232595-10232614 | None:intergenic | 40.0% | |
GCTGTCAAAGAATTTCAGTC+GGG | + | chr5.4:10232958-10232977 | MS.gene010332:intron | 40.0% | |
GTATGCACCTTGTTAGAGTT+TGG | - | chr5.4:10231608-10231627 | None:intergenic | 40.0% | |
TACATTCTCTGCCTTTGTCT+CGG | + | chr5.4:10232440-10232459 | MS.gene010332:CDS | 40.0% | |
TCCATCTTGAAGCTGGTTAA+TGG | - | chr5.4:10230778-10230797 | None:intergenic | 40.0% | |
TCCATTAACCAGCTTCAAGA+TGG | + | chr5.4:10230774-10230793 | MS.gene010332:CDS | 40.0% | |
TTATCAGTCTGTGACACACA+TGG | - | chr5.4:10231704-10231723 | None:intergenic | 40.0% | |
TTGAGAACCGCCTAATAGAT+TGG | - | chr5.4:10232852-10232871 | None:intergenic | 40.0% | |
TTTAAATTTGCAGGAGGGTG+TGG | + | chr5.4:10231338-10231357 | MS.gene010332:intron | 40.0% | |
! | GACATTCAAGTTTGCAGGAT+TGG | - | chr5.4:10232705-10232724 | None:intergenic | 40.0% |
!! | CACTTTTGTCCTATTTTGGG+AGG | + | chr5.4:10231805-10231824 | MS.gene010332:intron | 40.0% |
AACAAGTCTTCGCCGTGTAT+TGG | - | chr5.4:10232794-10232813 | None:intergenic | 45.0% | |
ACATACGCCAGTGTCTTACA+AGG | + | chr5.4:10231980-10231999 | MS.gene010332:intron | 45.0% | |
ACGTCTCCAACAATCTTCAG+AGG | + | chr5.4:10232675-10232694 | MS.gene010332:CDS | 45.0% | |
AGCTCTCAACCTCCCAAAAT+AGG | - | chr5.4:10231817-10231836 | None:intergenic | 45.0% | |
CTTGGAGCTGAAGCTGTTTA+AGG | - | chr5.4:10231757-10231776 | None:intergenic | 45.0% | |
GAAGTTCCAACAAAGTCAGC+TGG | + | chr5.4:10231375-10231394 | MS.gene010332:CDS | 45.0% | |
TCTTCATCTTCTTCCATGCC+AGG | + | chr5.4:10230750-10230769 | MS.gene010332:CDS | 45.0% | |
TTGAGCAGAGAAGAAGGAGT+AGG | + | chr5.4:10231546-10231565 | MS.gene010332:intron | 45.0% | |
! | AAACAAGGAGCGTGAGATTG+TGG | - | chr5.4:10232928-10232947 | None:intergenic | 45.0% |
! | ACGGTGTTGAGTGAAGGAAA+CGG | + | chr5.4:10232469-10232488 | MS.gene010332:CDS | 45.0% |
! | ATGAGTACGGTGTTGAGTGA+AGG | + | chr5.4:10232463-10232482 | MS.gene010332:CDS | 45.0% |
! | GGCTTACCTCTGAAGATTGT+TGG | - | chr5.4:10232684-10232703 | None:intergenic | 45.0% |
! | TGAAGCTGGTTAATGGATCC+TGG | - | chr5.4:10230771-10230790 | None:intergenic | 45.0% |
!! | ATTGATGACGGGCTGAGAAT+AGG | - | chr5.4:10231936-10231955 | None:intergenic | 45.0% |
!! | GACTTGTTGAGCAGAGAAGA+AGG | + | chr5.4:10231540-10231559 | MS.gene010332:intron | 45.0% |
!! | GAGATGCTGGGTTTAAGTTG+AGG | - | chr5.4:10231848-10231867 | None:intergenic | 45.0% |
!! | TTGATGACGGGCTGAGAATA+GGG | - | chr5.4:10231935-10231954 | None:intergenic | 45.0% |
!! | TTTGGTGCCTTGTAAGACAC+TGG | - | chr5.4:10231990-10232009 | None:intergenic | 45.0% |
!!! | GGAGACGTTTTTTCTGTGCT+GGG | - | chr5.4:10232663-10232682 | None:intergenic | 45.0% |
!!! | TGGAGACGTTTTTTCTGTGC+TGG | - | chr5.4:10232664-10232683 | None:intergenic | 45.0% |
AAGGAGTTGTCTAGGGGATG+AGG | - | chr5.4:10232526-10232545 | None:intergenic | 50.0% | |
ACAGCTTCAGCTCCAAGTAC+AGG | + | chr5.4:10231760-10231779 | MS.gene010332:CDS | 50.0% | |
ACCGTACTCATCCGAGACAA+AGG | - | chr5.4:10232454-10232473 | None:intergenic | 50.0% | |
ACTTCTTTCGGGGTGGAATC+TGG | + | chr5.4:10232634-10232653 | MS.gene010332:CDS | 50.0% | |
AGAATTTCAGTCGGGCGCAA+TGG | + | chr5.4:10232966-10232985 | MS.gene010332:CDS | 50.0% | |
CAAAGTCAGCTGGTGCTTCT+AGG | + | chr5.4:10231385-10231404 | MS.gene010332:CDS | 50.0% | |
CACAGAAACTTCTTTCGGGG+TGG | + | chr5.4:10232627-10232646 | MS.gene010332:CDS | 50.0% | |
GCCTTTGTCTCGGATGAGTA+CGG | + | chr5.4:10232450-10232469 | MS.gene010332:CDS | 50.0% | |
TCTTCCTCTTCTGTTGGAGC+AGG | + | chr5.4:10230849-10230868 | MS.gene010332:CDS | 50.0% | |
! | CTGGTTAATGGATCCTGGCA+TGG | - | chr5.4:10230766-10230785 | None:intergenic | 50.0% |
! | GAAGCACCAGCTGACTTTGT+TGG | - | chr5.4:10231384-10231403 | None:intergenic | 50.0% |
CGCTCCTGACTGATCTCTTC+CGG | - | chr5.4:10233031-10233050 | None:intergenic | 55.0% | |
CGGAAGAGATCAGTCAGGAG+CGG | + | chr5.4:10233029-10233048 | MS.gene010332:CDS | 55.0% | |
GTTGCCGGAAGAGATCAGTC+AGG | + | chr5.4:10233024-10233043 | MS.gene010332:CDS | 55.0% | |
TCCTCCTGCTCCAACAGAAG+AGG | - | chr5.4:10230856-10230875 | None:intergenic | 55.0% | |
TCCTCTTCTGTTGGAGCAGG+AGG | + | chr5.4:10230852-10230871 | MS.gene010332:CDS | 55.0% | |
!! | ATGACGGGCTGAGAATAGGG+TGG | - | chr5.4:10231932-10231951 | None:intergenic | 55.0% |
GTTGGAGCAGGAGGACTCAG+TGG | + | chr5.4:10230861-10230880 | MS.gene010332:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 10230654 | 10233104 | 10230654 | ID=MS.gene010332 |
chr5.4 | mRNA | 10230654 | 10233104 | 10230654 | ID=MS.gene010332.t1;Parent=MS.gene010332 |
chr5.4 | exon | 10230654 | 10230917 | 10230654 | ID=MS.gene010332.t1.exon1;Parent=MS.gene010332.t1 |
chr5.4 | CDS | 10230654 | 10230917 | 10230654 | ID=cds.MS.gene010332.t1;Parent=MS.gene010332.t1 |
chr5.4 | exon | 10231351 | 10231458 | 10231351 | ID=MS.gene010332.t1.exon2;Parent=MS.gene010332.t1 |
chr5.4 | CDS | 10231351 | 10231458 | 10231351 | ID=cds.MS.gene010332.t1;Parent=MS.gene010332.t1 |
chr5.4 | exon | 10231554 | 10231619 | 10231554 | ID=MS.gene010332.t1.exon3;Parent=MS.gene010332.t1 |
chr5.4 | CDS | 10231554 | 10231619 | 10231554 | ID=cds.MS.gene010332.t1;Parent=MS.gene010332.t1 |
chr5.4 | exon | 10231716 | 10231781 | 10231716 | ID=MS.gene010332.t1.exon4;Parent=MS.gene010332.t1 |
chr5.4 | CDS | 10231716 | 10231781 | 10231716 | ID=cds.MS.gene010332.t1;Parent=MS.gene010332.t1 |
chr5.4 | exon | 10232385 | 10232696 | 10232385 | ID=MS.gene010332.t1.exon5;Parent=MS.gene010332.t1 |
chr5.4 | CDS | 10232385 | 10232696 | 10232385 | ID=cds.MS.gene010332.t1;Parent=MS.gene010332.t1 |
chr5.4 | exon | 10232791 | 10232872 | 10232791 | ID=MS.gene010332.t1.exon6;Parent=MS.gene010332.t1 |
chr5.4 | CDS | 10232791 | 10232872 | 10232791 | ID=cds.MS.gene010332.t1;Parent=MS.gene010332.t1 |
chr5.4 | exon | 10232959 | 10233104 | 10232959 | ID=MS.gene010332.t1.exon7;Parent=MS.gene010332.t1 |
chr5.4 | CDS | 10232959 | 10233104 | 10232959 | ID=cds.MS.gene010332.t1;Parent=MS.gene010332.t1 |
Gene Sequence |
Protein sequence |