Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010346.t1 | XP_003611730.1 | 82.1 | 251 | 41 | 1 | 1 | 251 | 1 | 247 | 9.80E-102 | 379.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010346.t1 | Q9FHA7 | 56.8 | 192 | 69 | 4 | 17 | 204 | 4 | 185 | 2.2e-41 | 170.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010346.t1 | G7K6N1 | 82.1 | 251 | 41 | 1 | 1 | 251 | 1 | 247 | 7.1e-102 | 379.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene010346.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010346.t1 | MTR_5g017210 | 91.700 | 253 | 13 | 4 | 1 | 251 | 1 | 247 | 4.02e-138 | 388 |
| MS.gene010346.t1 | MTR_3g101810 | 54.067 | 209 | 79 | 7 | 25 | 216 | 40 | 248 | 1.70e-57 | 184 |
| MS.gene010346.t1 | MTR_8g093500 | 74.725 | 91 | 23 | 0 | 114 | 204 | 87 | 177 | 4.63e-46 | 155 |
| MS.gene010346.t1 | MTR_2g100490 | 57.252 | 131 | 48 | 3 | 84 | 207 | 227 | 356 | 3.85e-32 | 121 |
| MS.gene010346.t1 | MTR_8g015450 | 63.636 | 99 | 32 | 1 | 113 | 207 | 296 | 394 | 4.54e-29 | 114 |
| MS.gene010346.t1 | MTR_7g069590 | 68.966 | 58 | 18 | 0 | 147 | 204 | 32 | 89 | 4.35e-23 | 92.0 |
| MS.gene010346.t1 | MTR_5g079500 | 55.696 | 79 | 33 | 1 | 127 | 203 | 202 | 280 | 2.07e-20 | 88.6 |
| MS.gene010346.t1 | MTR_1g106460 | 53.731 | 67 | 31 | 0 | 137 | 203 | 234 | 300 | 1.29e-17 | 80.9 |
| MS.gene010346.t1 | MTR_1g018090 | 62.963 | 54 | 20 | 0 | 150 | 203 | 283 | 336 | 3.91e-17 | 80.1 |
| MS.gene010346.t1 | MTR_5g005110 | 62.963 | 54 | 20 | 0 | 150 | 203 | 233 | 286 | 6.20e-17 | 79.3 |
| MS.gene010346.t1 | MTR_1g106470 | 51.948 | 77 | 32 | 2 | 132 | 203 | 182 | 258 | 8.58e-17 | 78.2 |
| MS.gene010346.t1 | MTR_3g103030 | 55.556 | 63 | 28 | 0 | 141 | 203 | 229 | 291 | 3.61e-16 | 77.0 |
| MS.gene010346.t1 | MTR_4g131160 | 43.564 | 101 | 47 | 3 | 122 | 212 | 172 | 272 | 8.56e-15 | 73.6 |
| MS.gene010346.t1 | MTR_4g131160 | 43.564 | 101 | 47 | 3 | 122 | 212 | 175 | 275 | 8.98e-15 | 73.6 |
| MS.gene010346.t1 | MTR_1g080890 | 51.429 | 70 | 34 | 0 | 134 | 203 | 186 | 255 | 1.14e-14 | 72.8 |
| MS.gene010346.t1 | MTR_1g106480 | 64.444 | 45 | 16 | 0 | 159 | 203 | 87 | 131 | 1.18e-13 | 67.0 |
| MS.gene010346.t1 | MTR_2g067000 | 46.667 | 75 | 33 | 1 | 137 | 204 | 146 | 220 | 1.13e-12 | 66.6 |
| MS.gene010346.t1 | MTR_1g060700 | 57.407 | 54 | 23 | 0 | 151 | 204 | 357 | 410 | 4.71e-12 | 65.5 |
| MS.gene010346.t1 | MTR_4g033295 | 50.769 | 65 | 31 | 1 | 142 | 205 | 119 | 183 | 5.64e-12 | 63.2 |
| MS.gene010346.t1 | MTR_4g033295 | 50.000 | 66 | 32 | 1 | 142 | 206 | 119 | 184 | 1.03e-11 | 62.4 |
| MS.gene010346.t1 | MTR_2g089070 | 48.148 | 54 | 28 | 0 | 151 | 204 | 146 | 199 | 8.98e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010346.t1 | AT5G67060 | 56.995 | 193 | 69 | 4 | 17 | 205 | 4 | 186 | 2.30e-51 | 167 |
| MS.gene010346.t1 | AT3G50330 | 53.881 | 219 | 70 | 6 | 14 | 224 | 4 | 199 | 3.02e-50 | 164 |
| MS.gene010346.t1 | AT5G67060 | 56.522 | 184 | 67 | 3 | 25 | 205 | 1 | 174 | 2.50e-48 | 159 |
| MS.gene010346.t1 | AT4G00120 | 66.667 | 96 | 29 | 1 | 116 | 208 | 87 | 182 | 3.85e-39 | 135 |
| MS.gene010346.t1 | AT3G21330 | 54.472 | 123 | 48 | 1 | 92 | 206 | 212 | 334 | 3.76e-38 | 137 |
| MS.gene010346.t1 | AT5G09750 | 75.556 | 90 | 22 | 0 | 114 | 203 | 92 | 181 | 7.43e-35 | 124 |
| MS.gene010346.t1 | AT5G01305 | 69.492 | 59 | 18 | 0 | 142 | 200 | 38 | 96 | 7.18e-22 | 89.4 |
| MS.gene010346.t1 | AT5G43175 | 50.725 | 69 | 34 | 0 | 135 | 203 | 126 | 194 | 7.66e-19 | 82.8 |
| MS.gene010346.t1 | AT4G33880 | 59.677 | 62 | 25 | 0 | 142 | 203 | 267 | 328 | 1.58e-18 | 84.0 |
| MS.gene010346.t1 | AT5G37800 | 56.164 | 73 | 25 | 1 | 138 | 203 | 191 | 263 | 3.99e-18 | 82.4 |
| MS.gene010346.t1 | AT1G66470 | 67.273 | 55 | 18 | 0 | 149 | 203 | 203 | 257 | 5.31e-18 | 81.6 |
| MS.gene010346.t1 | AT1G27740 | 51.471 | 68 | 33 | 0 | 136 | 203 | 162 | 229 | 5.33e-18 | 81.3 |
| MS.gene010346.t1 | AT2G14760 | 58.065 | 62 | 26 | 0 | 142 | 203 | 238 | 299 | 1.67e-17 | 80.9 |
| MS.gene010346.t1 | AT4G30980 | 39.200 | 125 | 75 | 1 | 79 | 203 | 69 | 192 | 7.69e-17 | 78.6 |
| MS.gene010346.t1 | AT2G24260 | 52.703 | 74 | 29 | 1 | 136 | 203 | 24 | 97 | 1.30e-16 | 77.0 |
| MS.gene010346.t1 | AT4G30980 | 39.200 | 125 | 75 | 1 | 79 | 203 | 117 | 240 | 1.56e-16 | 78.2 |
| MS.gene010346.t1 | AT2G24260 | 52.703 | 74 | 29 | 1 | 136 | 203 | 127 | 200 | 3.36e-16 | 77.4 |
| MS.gene010346.t1 | AT5G58010 | 54.545 | 66 | 30 | 0 | 138 | 203 | 96 | 161 | 8.93e-15 | 72.8 |
| MS.gene010346.t1 | AT2G14760 | 48.000 | 75 | 26 | 1 | 142 | 203 | 238 | 312 | 3.22e-14 | 71.6 |
| MS.gene010346.t1 | AT4G09180 | 43.210 | 81 | 45 | 1 | 124 | 203 | 167 | 247 | 7.32e-11 | 61.2 |
Find 58 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGTGGTTTAATGGTTTC+TGG | 0.032783 | 5.4:-10338097 | None:intergenic |
| CTTTCTCTTTGGTGGTTTAA+TGG | 0.129321 | 5.4:-10338104 | None:intergenic |
| ACAAACAATGATTTCCCTTA+TGG | 0.235794 | 5.4:+10337842 | MS.gene010346:CDS |
| ATCTTCACATTCTTTCTCTT+TGG | 0.246196 | 5.4:-10338115 | None:intergenic |
| AATTATTCTTCTTTGCTTAG+AGG | 0.274535 | 5.4:+10338376 | MS.gene010346:CDS |
| GAGATTGAGAGTGTTGTTAT+TGG | 0.283226 | 5.4:-10337813 | None:intergenic |
| AAAGAATTAGTGAAAGAATA+AGG | 0.285456 | 5.4:+10338179 | MS.gene010346:CDS |
| TTATTGGTGTTGCTATAAAA+AGG | 0.298991 | 5.4:-10337797 | None:intergenic |
| TTGGTGGTTTAATGGTTTCT+GGG | 0.314323 | 5.4:-10338096 | None:intergenic |
| TGCCATTGAATTCTTCTTCT+CGG | 0.319338 | 5.4:-10338020 | None:intergenic |
| TGTCTTGCTGCTACACTTTG+TGG | 0.337683 | 5.4:-10338148 | None:intergenic |
| TTCACATTCTTTCTCTTTGG+TGG | 0.352271 | 5.4:-10338112 | None:intergenic |
| TTCAAACGTTGGAACAAGTT+GGG | 0.370508 | 5.4:+10338296 | MS.gene010346:CDS |
| TTGAATGTTGTTGGGTTTCA+AGG | 0.375435 | 5.4:+10338331 | MS.gene010346:CDS |
| TGAAGACATACTGAAAACTT+TGG | 0.382012 | 5.4:+10337703 | MS.gene010346:CDS |
| GTTTCTGGGTCTATGTTAAT+CGG | 0.384832 | 5.4:-10338082 | None:intergenic |
| TGATGGGATTTGAACTCTGT+TGG | 0.387374 | 5.4:-10337966 | None:intergenic |
| GCCATTGAATTCTTCTTCTC+GGG | 0.399282 | 5.4:-10338019 | None:intergenic |
| ACTAAGCATTTGTTTGGAAG+TGG | 0.402015 | 5.4:-10338428 | None:intergenic |
| AATAGACCTTTGAATGTTGT+TGG | 0.403761 | 5.4:+10338322 | MS.gene010346:CDS |
| GTTACATTTGAGTTTCCATA+AGG | 0.409196 | 5.4:-10337857 | None:intergenic |
| TGGAAGTGGGACCCACCATT+TGG | 0.414540 | 5.4:-10338414 | None:intergenic |
| GATGGGATTTGAACTCTGTT+GGG | 0.418955 | 5.4:-10337965 | None:intergenic |
| GTGTCAACTAAGCATTTGTT+TGG | 0.421668 | 5.4:-10338434 | None:intergenic |
| GAAGACATACTGAAAACTTT+GGG | 0.432163 | 5.4:+10337704 | MS.gene010346:CDS |
| TTCATCACCTTGCCAAATGG+TGG | 0.447650 | 5.4:+10338402 | MS.gene010346:CDS |
| TGAAGAGGATAAGACAATAA+TGG | 0.449931 | 5.4:-10337911 | None:intergenic |
| ATAGACCTTTGAATGTTGTT+GGG | 0.458742 | 5.4:+10338323 | MS.gene010346:CDS |
| TGAATTCTTCTTCTCGGGAT+AGG | 0.459318 | 5.4:-10338014 | None:intergenic |
| AGCGACGGCGGTGGTGTCAT+TGG | 0.462107 | 5.4:-10337938 | None:intergenic |
| ATAGGAGAATGAAGAATTGT+TGG | 0.474836 | 5.4:-10337996 | None:intergenic |
| TTACATTTGAGTTTCCATAA+GGG | 0.484501 | 5.4:-10337856 | None:intergenic |
| GTTCAAACGTTGGAACAAGT+TGG | 0.486495 | 5.4:+10338295 | MS.gene010346:CDS |
| GATGACAATGATGATGCAAA+TGG | 0.498844 | 5.4:+10337751 | MS.gene010346:CDS |
| AATTGTTGGTTCTTCCTGAT+GGG | 0.499420 | 5.4:-10337982 | None:intergenic |
| GAATTGTTGGTTCTTCCTGA+TGG | 0.503297 | 5.4:-10337983 | None:intergenic |
| TTGTTCATCACCTTGCCAAA+TGG | 0.505893 | 5.4:+10338399 | MS.gene010346:CDS |
| AACAGAGTTCAAATCCCATC+AGG | 0.513806 | 5.4:+10337968 | MS.gene010346:CDS |
| TGTTGTTGGGTTTCAAGGAG+TGG | 0.515205 | 5.4:+10338336 | MS.gene010346:CDS |
| CTAAGCATTTGTTTGGAAGT+GGG | 0.548242 | 5.4:-10338427 | None:intergenic |
| TTGGGTTGAAGCGACGGCGG+TGG | 0.553364 | 5.4:-10337947 | None:intergenic |
| GAAGAAACAAGTTCAAACGT+TGG | 0.554879 | 5.4:+10338285 | MS.gene010346:CDS |
| TCATCACCTTGCCAAATGGT+GGG | 0.555921 | 5.4:+10338403 | MS.gene010346:CDS |
| TGAAACCCAACAACATTCAA+AGG | 0.560330 | 5.4:-10338328 | None:intergenic |
| TCAAACGTTGGAACAAGTTG+GGG | 0.569007 | 5.4:+10338297 | MS.gene010346:CDS |
| ACTCTGTTGGGTTGAAGCGA+CGG | 0.575367 | 5.4:-10337953 | None:intergenic |
| GAGAGAGATGATATTTCGAA+TGG | 0.580908 | 5.4:+10338048 | MS.gene010346:CDS |
| GGTGTCATTGGTTGTTGAAG+AGG | 0.589982 | 5.4:-10337926 | None:intergenic |
| AAAGAATGTGAAGATTTCAA+AGG | 0.590303 | 5.4:+10338123 | MS.gene010346:CDS |
| TCCCGAGAAGAAGAATTCAA+TGG | 0.593246 | 5.4:+10338018 | MS.gene010346:CDS |
| AATGGTGGATTGATCAATGA+AGG | 0.607991 | 5.4:-10337893 | None:intergenic |
| AGAGGATAAGACAATAATGG+TGG | 0.609384 | 5.4:-10337908 | None:intergenic |
| AGAGATGATATTTCGAATGG+CGG | 0.620797 | 5.4:+10338051 | MS.gene010346:CDS |
| GTGGGACCCACCATTTGGCA+AGG | 0.634945 | 5.4:-10338409 | None:intergenic |
| GGGAAATGTTGAAAGCAACA+TGG | 0.641963 | 5.4:+10337724 | MS.gene010346:CDS |
| CTGTTGGGTTGAAGCGACGG+CGG | 0.671897 | 5.4:-10337950 | None:intergenic |
| ATATTACAAAGATTAGTACC+TGG | 0.683168 | 5.4:+10338202 | MS.gene010346:CDS |
| TTACAAAGATTAGTACCTGG+TGG | 0.689802 | 5.4:+10338205 | MS.gene010346:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAATTAGTGAAAGAATA+AGG | + | chr5.4:10338179-10338198 | MS.gene010346:CDS | 20.0% |
| ! | AAAAAGGTTCATATGAATCA+GGG | - | chr5.4:10337784-10337803 | None:intergenic | 25.0% |
| ! | AAAGAATGTGAAGATTTCAA+AGG | + | chr5.4:10338123-10338142 | MS.gene010346:CDS | 25.0% |
| ! | AATTATTCTTCTTTGCTTAG+AGG | + | chr5.4:10338376-10338395 | MS.gene010346:CDS | 25.0% |
| ! | ATATTACAAAGATTAGTACC+TGG | + | chr5.4:10338202-10338221 | MS.gene010346:CDS | 25.0% |
| ! | TAAAAAGGTTCATATGAATC+AGG | - | chr5.4:10337785-10337804 | None:intergenic | 25.0% |
| !! | TTACATTTGAGTTTCCATAA+GGG | - | chr5.4:10337859-10337878 | None:intergenic | 25.0% |
| !!! | TTATTGGTGTTGCTATAAAA+AGG | - | chr5.4:10337800-10337819 | None:intergenic | 25.0% |
| AATAGACCTTTGAATGTTGT+TGG | + | chr5.4:10338322-10338341 | MS.gene010346:CDS | 30.0% | |
| ACAAACAATGATTTCCCTTA+TGG | + | chr5.4:10337842-10337861 | MS.gene010346:CDS | 30.0% | |
| ATAGACCTTTGAATGTTGTT+GGG | + | chr5.4:10338323-10338342 | MS.gene010346:CDS | 30.0% | |
| ATAGGAGAATGAAGAATTGT+TGG | - | chr5.4:10337999-10338018 | None:intergenic | 30.0% | |
| ATCTTCACATTCTTTCTCTT+TGG | - | chr5.4:10338118-10338137 | None:intergenic | 30.0% | |
| GAAGACATACTGAAAACTTT+GGG | + | chr5.4:10337704-10337723 | MS.gene010346:CDS | 30.0% | |
| TGAAGACATACTGAAAACTT+TGG | + | chr5.4:10337703-10337722 | MS.gene010346:CDS | 30.0% | |
| TGAAGAGGATAAGACAATAA+TGG | - | chr5.4:10337914-10337933 | None:intergenic | 30.0% | |
| ! | GTTACATTTGAGTTTCCATA+AGG | - | chr5.4:10337860-10337879 | None:intergenic | 30.0% |
| ACTAAGCATTTGTTTGGAAG+TGG | - | chr5.4:10338431-10338450 | None:intergenic | 35.0% | |
| AGAGATGATATTTCGAATGG+CGG | + | chr5.4:10338051-10338070 | MS.gene010346:CDS | 35.0% | |
| AGAGGATAAGACAATAATGG+TGG | - | chr5.4:10337911-10337930 | None:intergenic | 35.0% | |
| CTAAGCATTTGTTTGGAAGT+GGG | - | chr5.4:10338430-10338449 | None:intergenic | 35.0% | |
| GAAGAAACAAGTTCAAACGT+TGG | + | chr5.4:10338285-10338304 | MS.gene010346:CDS | 35.0% | |
| GAGAGAGATGATATTTCGAA+TGG | + | chr5.4:10338048-10338067 | MS.gene010346:CDS | 35.0% | |
| TGAAACCCAACAACATTCAA+AGG | - | chr5.4:10338331-10338350 | None:intergenic | 35.0% | |
| TGCCATTGAATTCTTCTTCT+CGG | - | chr5.4:10338023-10338042 | None:intergenic | 35.0% | |
| TTACAAAGATTAGTACCTGG+TGG | + | chr5.4:10338205-10338224 | MS.gene010346:CDS | 35.0% | |
| TTCAAACGTTGGAACAAGTT+GGG | + | chr5.4:10338296-10338315 | MS.gene010346:CDS | 35.0% | |
| TTCACATTCTTTCTCTTTGG+TGG | - | chr5.4:10338115-10338134 | None:intergenic | 35.0% | |
| TTGAATGTTGTTGGGTTTCA+AGG | + | chr5.4:10338331-10338350 | MS.gene010346:CDS | 35.0% | |
| ! | CTTTCTCTTTGGTGGTTTAA+TGG | - | chr5.4:10338107-10338126 | None:intergenic | 35.0% |
| ! | GATGACAATGATGATGCAAA+TGG | + | chr5.4:10337751-10337770 | MS.gene010346:CDS | 35.0% |
| ! | GTTTCTGGGTCTATGTTAAT+CGG | - | chr5.4:10338085-10338104 | None:intergenic | 35.0% |
| ! | TTGGTGGTTTAATGGTTTCT+GGG | - | chr5.4:10338099-10338118 | None:intergenic | 35.0% |
| ! | TTTGGTGGTTTAATGGTTTC+TGG | - | chr5.4:10338100-10338119 | None:intergenic | 35.0% |
| !! | AATGGTGGATTGATCAATGA+AGG | - | chr5.4:10337896-10337915 | None:intergenic | 35.0% |
| !! | AATTGTTGGTTCTTCCTGAT+GGG | - | chr5.4:10337985-10338004 | None:intergenic | 35.0% |
| !! | GAGATTGAGAGTGTTGTTAT+TGG | - | chr5.4:10337816-10337835 | None:intergenic | 35.0% |
| AACAGAGTTCAAATCCCATC+AGG | + | chr5.4:10337968-10337987 | MS.gene010346:CDS | 40.0% | |
| AGTACCTGGTGGAACAAAAA+TGG | + | chr5.4:10338216-10338235 | MS.gene010346:CDS | 40.0% | |
| GATGGGATTTGAACTCTGTT+GGG | - | chr5.4:10337968-10337987 | None:intergenic | 40.0% | |
| GCCATTGAATTCTTCTTCTC+GGG | - | chr5.4:10338022-10338041 | None:intergenic | 40.0% | |
| GGGAAATGTTGAAAGCAACA+TGG | + | chr5.4:10337724-10337743 | MS.gene010346:CDS | 40.0% | |
| GTTCAAACGTTGGAACAAGT+TGG | + | chr5.4:10338295-10338314 | MS.gene010346:CDS | 40.0% | |
| TCAAACGTTGGAACAAGTTG+GGG | + | chr5.4:10338297-10338316 | MS.gene010346:CDS | 40.0% | |
| TCCCGAGAAGAAGAATTCAA+TGG | + | chr5.4:10338018-10338037 | MS.gene010346:CDS | 40.0% | |
| TGAATTCTTCTTCTCGGGAT+AGG | - | chr5.4:10338017-10338036 | None:intergenic | 40.0% | |
| TGATGGGATTTGAACTCTGT+TGG | - | chr5.4:10337969-10337988 | None:intergenic | 40.0% | |
| TTGTTCATCACCTTGCCAAA+TGG | + | chr5.4:10338399-10338418 | MS.gene010346:CDS | 40.0% | |
| !! | GAATTGTTGGTTCTTCCTGA+TGG | - | chr5.4:10337986-10338005 | None:intergenic | 40.0% |
| TCATCACCTTGCCAAATGGT+GGG | + | chr5.4:10338403-10338422 | MS.gene010346:CDS | 45.0% | |
| TGTCTTGCTGCTACACTTTG+TGG | - | chr5.4:10338151-10338170 | None:intergenic | 45.0% | |
| TGTTGTTGGGTTTCAAGGAG+TGG | + | chr5.4:10338336-10338355 | MS.gene010346:CDS | 45.0% | |
| TTCATCACCTTGCCAAATGG+TGG | + | chr5.4:10338402-10338421 | MS.gene010346:CDS | 45.0% | |
| !! | GGTGTCATTGGTTGTTGAAG+AGG | - | chr5.4:10337929-10337948 | None:intergenic | 45.0% |
| !! | GTGTCCATTTTTGTTCCACC+AGG | - | chr5.4:10338223-10338242 | None:intergenic | 45.0% |
| !! | ACTCTGTTGGGTTGAAGCGA+CGG | - | chr5.4:10337956-10337975 | None:intergenic | 50.0% |
| TGGAAGTGGGACCCACCATT+TGG | - | chr5.4:10338417-10338436 | None:intergenic | 55.0% | |
| GTGGGACCCACCATTTGGCA+AGG | - | chr5.4:10338412-10338431 | None:intergenic | 60.0% | |
| !! | CTGTTGGGTTGAAGCGACGG+CGG | - | chr5.4:10337953-10337972 | None:intergenic | 60.0% |
| !! | AGCGACGGCGGTGGTGTCAT+TGG | - | chr5.4:10337941-10337960 | None:intergenic | 65.0% |
| !! | TTGGGTTGAAGCGACGGCGG+TGG | - | chr5.4:10337950-10337969 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 10337698 | 10338453 | 10337698 | ID=MS.gene010346 |
| chr5.4 | mRNA | 10337698 | 10338453 | 10337698 | ID=MS.gene010346.t1;Parent=MS.gene010346 |
| chr5.4 | exon | 10337698 | 10338453 | 10337698 | ID=MS.gene010346.t1.exon1;Parent=MS.gene010346.t1 |
| chr5.4 | CDS | 10337698 | 10338453 | 10337698 | ID=cds.MS.gene010346.t1;Parent=MS.gene010346.t1 |
| Gene Sequence |
| Protein sequence |
