Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010347.t1 | GAU22574.1 | 49.1 | 232 | 117 | 1 | 226 | 457 | 539 | 769 | 1.20E-55 | 227.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010347.t1 | Q9SZL8 | 39.1 | 92 | 53 | 2 | 153 | 241 | 77 | 168 | 2.0e-08 | 62.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010347.t1 | A0A2Z6LT40 | 49.1 | 232 | 117 | 1 | 226 | 457 | 539 | 769 | 8.4e-56 | 227.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene010347.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010347.t1 | MTR_1g070355 | 40.881 | 159 | 84 | 3 | 78 | 235 | 12 | 161 | 8.98e-28 | 116 |
| MS.gene010347.t1 | MTR_3g448650 | 32.593 | 135 | 83 | 3 | 90 | 223 | 30 | 157 | 2.48e-19 | 85.9 |
| MS.gene010347.t1 | MTR_0060s0090 | 40.000 | 100 | 56 | 2 | 152 | 250 | 59 | 155 | 3.44e-18 | 82.0 |
| MS.gene010347.t1 | MTR_2g101460 | 31.875 | 160 | 92 | 5 | 90 | 248 | 3 | 146 | 2.17e-16 | 78.2 |
| MS.gene010347.t1 | MTR_2g101460 | 35.000 | 140 | 79 | 4 | 110 | 248 | 8 | 136 | 1.26e-15 | 75.9 |
| MS.gene010347.t1 | MTR_5g076070 | 29.353 | 201 | 115 | 6 | 102 | 296 | 18 | 197 | 9.57e-14 | 72.0 |
| MS.gene010347.t1 | MTR_1g052260 | 36.735 | 98 | 61 | 1 | 129 | 225 | 56 | 153 | 2.15e-13 | 68.2 |
| MS.gene010347.t1 | MTR_6g463250 | 32.787 | 122 | 65 | 2 | 129 | 250 | 68 | 172 | 7.84e-13 | 67.0 |
| MS.gene010347.t1 | MTR_4g035820 | 38.144 | 97 | 58 | 2 | 149 | 245 | 76 | 170 | 3.96e-12 | 68.9 |
| MS.gene010347.t1 | MTR_6g053140 | 32.381 | 105 | 65 | 2 | 131 | 235 | 85 | 183 | 3.72e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 130 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTGGACCTGACTGGTTT+AGG | 0.190644 | 5.4:+10357650 | MS.gene010347:CDS |
| CATTGGACCTGACTGGTTTA+GGG | 0.232440 | 5.4:+10357651 | MS.gene010347:CDS |
| CAAATGGTCGTCCGACATAT+TGG | 0.295035 | 5.4:+10359364 | MS.gene010347:CDS |
| TGAGCATATCATTGCAGTTT+TGG | 0.306428 | 5.4:+10359257 | MS.gene010347:CDS |
| CTTCCACCACGTCCTCTTCA+AGG | 0.318946 | 5.4:-10359554 | None:intergenic |
| ACGGAGCATTGATGTTTAGA+TGG | 0.326638 | 5.4:+10359409 | MS.gene010347:CDS |
| AAGAATGCTAAGGATGTATT+AGG | 0.335664 | 5.4:+10359333 | MS.gene010347:CDS |
| TGACATCCACATCGAGTATA+AGG | 0.341168 | 5.4:-10357884 | None:intergenic |
| CCTTTGGTTCTGACAGAAAC+AGG | 0.341317 | 5.4:-10359591 | None:intergenic |
| CTACTCAATACAAGGGATTC+AGG | 0.346157 | 5.4:-10359303 | None:intergenic |
| TGGATGTCAAGCTATGTTTC+GGG | 0.355654 | 5.4:+10357898 | MS.gene010347:CDS |
| CACTATCAACTTGGATATGT+TGG | 0.358557 | 5.4:-10357613 | None:intergenic |
| TCTTCTGCCATGGTCGTAAC+TGG | 0.364844 | 5.4:+10359093 | MS.gene010347:CDS |
| AATCCCTTGTATTGAGTAGA+TGG | 0.377553 | 5.4:+10359307 | MS.gene010347:CDS |
| TTTGTAAGGAGAATTGAGTT+TGG | 0.379815 | 5.4:+10357680 | MS.gene010347:CDS |
| GTGGATGTCAAGCTATGTTT+CGG | 0.399890 | 5.4:+10357897 | MS.gene010347:CDS |
| CAGACATTGGAGAAGATGTT+AGG | 0.400502 | 5.4:+10357294 | MS.gene010347:CDS |
| TTTGCCATAGAGAAGGATAT+AGG | 0.402899 | 5.4:+10357819 | MS.gene010347:CDS |
| GATTGTAGTCAATTTATTGA+TGG | 0.404804 | 5.4:+10357254 | MS.gene010347:CDS |
| AAATGGTCGTCCGACATATT+GGG | 0.404889 | 5.4:+10359365 | MS.gene010347:CDS |
| AACACCACCACCTCTACCTT+TGG | 0.419400 | 5.4:-10359607 | None:intergenic |
| GTTTAGGGGCTCTATTTGTA+AGG | 0.428054 | 5.4:+10357666 | MS.gene010347:CDS |
| TGTTCTGCATGTGGTGATCC+TGG | 0.429007 | 5.4:+10359669 | MS.gene010347:CDS |
| GTTCACCCCTTCATCATCTC+CGG | 0.429393 | 5.4:-10357417 | None:intergenic |
| AAGTTGCTATATTGCAAATC+AGG | 0.434305 | 5.4:+10357773 | MS.gene010347:CDS |
| TGCTGATGACATTGCGGCAT+TGG | 0.435837 | 5.4:+10357634 | MS.gene010347:CDS |
| AAAACATGTTTGCGAAGAAC+GGG | 0.439020 | 5.4:+10359702 | MS.gene010347:CDS |
| GATGAAGAAGTAGTAAACTA+TGG | 0.439397 | 5.4:+10357467 | MS.gene010347:CDS |
| AAGATGGAAGTGAGGCAGAA+GGG | 0.440842 | 5.4:+10357546 | MS.gene010347:CDS |
| TGTCGGAGGATGGAGTCATT+TGG | 0.440844 | 5.4:+10359225 | MS.gene010347:CDS |
| GAGGCAGAAGGGGTAGACTA+TGG | 0.449884 | 5.4:+10357557 | MS.gene010347:CDS |
| AATGGTGAGTTTGAAGAAGA+TGG | 0.452329 | 5.4:+10357380 | MS.gene010347:CDS |
| CAGGTGTGCTTGTCGGAGGA+TGG | 0.453329 | 5.4:+10359215 | MS.gene010347:CDS |
| CACCTGAAAATTTCTTCTGA+AGG | 0.454758 | 5.4:-10359198 | None:intergenic |
| GAAGATGGAAGTGAGGCAGA+AGG | 0.466220 | 5.4:+10357545 | MS.gene010347:CDS |
| CCACATCGAGTATAAGGTCT+TGG | 0.471265 | 5.4:-10357878 | None:intergenic |
| TATGAGTTCTATAAATCCTA+TGG | 0.471575 | 5.4:+10357719 | MS.gene010347:CDS |
| CCACTAGTGGAACAAACAAT+AGG | 0.473527 | 5.4:+10359634 | MS.gene010347:CDS |
| CCTATTGTTTGTTCCACTAG+TGG | 0.476370 | 5.4:-10359634 | None:intergenic |
| CGGAGCATTGATGTTTAGAT+GGG | 0.483289 | 5.4:+10359410 | MS.gene010347:CDS |
| AGATGTTAGGCTTGAAGAGG+GGG | 0.483778 | 5.4:+10357307 | MS.gene010347:CDS |
| TTGTCCATCTACTCAATACA+AGG | 0.487091 | 5.4:-10359311 | None:intergenic |
| TTTGAAGAAGATGGAGGTAG+TGG | 0.488205 | 5.4:+10357389 | MS.gene010347:CDS |
| ATCACCACATGCAGAACAAT+GGG | 0.489031 | 5.4:-10359664 | None:intergenic |
| GATGATGAAGGGGTGAACTA+TGG | 0.489858 | 5.4:+10357422 | MS.gene010347:CDS |
| GAAGATGTTAGGCTTGAAGA+GGG | 0.494052 | 5.4:+10357305 | MS.gene010347:CDS |
| GAAAACATGTTTGCGAAGAA+CGG | 0.501511 | 5.4:+10359701 | MS.gene010347:CDS |
| TGTCATCAGCACTATCAACT+TGG | 0.502615 | 5.4:-10357622 | None:intergenic |
| GATACACGCCACTCCCGGTC+CGG | 0.507977 | 5.4:-10359168 | None:intergenic |
| TTTATACTGTTAGTAAGTAC+AGG | 0.508208 | 5.4:+10359142 | MS.gene010347:CDS |
| AGTGGTAGACTCTGGTGACT+TGG | 0.508493 | 5.4:+10357520 | MS.gene010347:CDS |
| TCTGGTGACTTGGAAGAAGA+TGG | 0.510231 | 5.4:+10357530 | MS.gene010347:CDS |
| ACAGGAGACCGGACCGGGAG+TGG | 0.510990 | 5.4:+10359160 | MS.gene010347:CDS |
| TAAGTACAGGAGACCGGACC+GGG | 0.511537 | 5.4:+10359155 | MS.gene010347:CDS |
| ATTGATGGAAGTCATGAAGA+AGG | 0.512557 | 5.4:+10357269 | MS.gene010347:CDS |
| AATGGTAACATGGAAAATGA+TGG | 0.512774 | 5.4:+10357335 | MS.gene010347:CDS |
| CATGAAGAAGGGGCAGACAT+TGG | 0.514562 | 5.4:+10357281 | MS.gene010347:CDS |
| ACCTGAAAATTTCTTCTGAA+GGG | 0.515017 | 5.4:-10359197 | None:intergenic |
| AGATGGAAGTGATGAAGAAG+TGG | 0.515597 | 5.4:+10357502 | MS.gene010347:CDS |
| AGATGGAAGTGAGGCAGAAG+GGG | 0.516008 | 5.4:+10357547 | MS.gene010347:CDS |
| TTCACCCCTTCATCATCTCC+GGG | 0.522079 | 5.4:-10357416 | None:intergenic |
| GAATCCATTCGCTCTTCCAT+AGG | 0.524771 | 5.4:-10357735 | None:intergenic |
| AAAGGTAGAGGTGGTGGTGT+TGG | 0.526034 | 5.4:+10359609 | MS.gene010347:CDS |
| TTGATGGAAGTCATGAAGAA+GGG | 0.530018 | 5.4:+10357270 | MS.gene010347:CDS |
| TATGGTGACATGGAAGAAGA+TGG | 0.530998 | 5.4:+10357440 | MS.gene010347:CDS |
| TATGGTGACATGGAAGAAGA+TGG | 0.533808 | 5.4:+10357485 | MS.gene010347:CDS |
| AAATCCTATGGAAGAGCGAA+TGG | 0.535778 | 5.4:+10357731 | MS.gene010347:CDS |
| CCTGTTTCTGTCAGAACCAA+AGG | 0.539019 | 5.4:+10359591 | MS.gene010347:CDS |
| TATGGTGACATGGAAGAAGA+TGG | 0.540056 | 5.4:+10357575 | MS.gene010347:CDS |
| AAGATGTTAGGCTTGAAGAG+GGG | 0.541806 | 5.4:+10357306 | MS.gene010347:CDS |
| GGTGGTGTTGGCTCCACTAG+TGG | 0.543574 | 5.4:+10359621 | MS.gene010347:CDS |
| GGTCAACCCGGAGATGATGA+AGG | 0.544699 | 5.4:+10357410 | MS.gene010347:CDS |
| GTATTAGGTAGCATCTCAAA+TGG | 0.548916 | 5.4:+10359348 | MS.gene010347:CDS |
| AGAACCAAAGGTAGAGGTGG+TGG | 0.551384 | 5.4:+10359603 | MS.gene010347:CDS |
| TCGCACCATGCAACAAGATA+CGG | 0.555096 | 5.4:+10359390 | MS.gene010347:CDS |
| AGAAGATGTTAGGCTTGAAG+AGG | 0.559618 | 5.4:+10357304 | MS.gene010347:CDS |
| ACATTTGTTTGCCATAGAGA+AGG | 0.560252 | 5.4:+10357812 | MS.gene010347:CDS |
| GTAAGTACAGGAGACCGGAC+CGG | 0.570841 | 5.4:+10359154 | MS.gene010347:CDS |
| GATCACCACATGCAGAACAA+TGG | 0.572897 | 5.4:-10359665 | None:intergenic |
| TAAATGATACACGCCACTCC+CGG | 0.573490 | 5.4:-10359173 | None:intergenic |
| ATTGCGGCATTGGACCTGAC+TGG | 0.574500 | 5.4:+10357644 | MS.gene010347:CDS |
| AGAACTCATATGCAATCTCT+AGG | 0.576256 | 5.4:-10357706 | None:intergenic |
| ATAGAGCCCCTAAACCAGTC+AGG | 0.576641 | 5.4:-10357658 | None:intergenic |
| TCTGTCAGAACCAAAGGTAG+AGG | 0.585136 | 5.4:+10359597 | MS.gene010347:CDS |
| GTCAACCCGGAGATGATGAA+GGG | 0.585763 | 5.4:+10357411 | MS.gene010347:CDS |
| ATTGGACCTGACTGGTTTAG+GGG | 0.585884 | 5.4:+10357652 | MS.gene010347:CDS |
| GGTGAGTTTGAAGAAGATGG+AGG | 0.588802 | 5.4:+10357383 | MS.gene010347:CDS |
| TGTTAGTAAGTACAGGAGAC+CGG | 0.598309 | 5.4:+10359149 | MS.gene010347:CDS |
| TTACGACCATGGCAGAAGAT+CGG | 0.602602 | 5.4:-10359089 | None:intergenic |
| GATGGAAGTGGTTACGAAAG+CGG | 0.618497 | 5.4:+10357353 | MS.gene010347:CDS |
| TTGAAAGCCGAACAAAAGAG+AGG | 0.620386 | 5.4:+10359507 | MS.gene010347:CDS |
| GTCAGAACCAAAGGTAGAGG+TGG | 0.620505 | 5.4:+10359600 | MS.gene010347:CDS |
| TGATGGAAGTCATGAAGAAG+GGG | 0.621331 | 5.4:+10357271 | MS.gene010347:CDS |
| AATCAACCGATCTTCTGCCA+TGG | 0.622000 | 5.4:+10359083 | MS.gene010347:CDS |
| CTTGGAAGAAGATGGAAGTG+AGG | 0.622092 | 5.4:+10357538 | MS.gene010347:CDS |
| ATGCTCCGTATCTTGTTGCA+TGG | 0.623256 | 5.4:-10359395 | None:intergenic |
| GGTTACGAAAGCGGAGACAA+TGG | 0.624816 | 5.4:+10357362 | MS.gene010347:CDS |
| CCAAGACCTTATACTCGATG+TGG | 0.624870 | 5.4:+10357878 | MS.gene010347:CDS |
| TTTCGATCCAGTTACGACCA+TGG | 0.625726 | 5.4:-10359100 | None:intergenic |
| TGTATTTCAGGAACATGCGC+CGG | 0.626380 | 5.4:+10359838 | MS.gene010347:intron |
| AGTAGTAAACTATGGTGACA+TGG | 0.626648 | 5.4:+10357475 | MS.gene010347:CDS |
| ACATGTTTGCGAAGAACGGG+TGG | 0.634671 | 5.4:+10359705 | MS.gene010347:CDS |
| ATAAACTGCATAAACTCCGC+CGG | 0.634695 | 5.4:-10359857 | None:intergenic |
| GACAAACCTTGAAGAGGACG+TGG | 0.635642 | 5.4:+10359548 | MS.gene010347:CDS |
| GTCGCCCATTGTTCTGCATG+TGG | 0.637158 | 5.4:+10359660 | MS.gene010347:CDS |
| ACTGCAATGATATGCTCACA+TGG | 0.637565 | 5.4:-10359252 | None:intergenic |
| ATTTCAGGAACATGCGCCGG+CGG | 0.641162 | 5.4:+10359841 | MS.gene010347:intron |
| GAGCATTGATGTTTAGATGG+GGG | 0.641638 | 5.4:+10359412 | MS.gene010347:CDS |
| TAACACGACAAACCTTGAAG+AGG | 0.643547 | 5.4:+10359542 | MS.gene010347:CDS |
| AATGGATTCACAGTTCGCAA+AGG | 0.645718 | 5.4:+10357749 | MS.gene010347:CDS |
| GATGGAGGTAGTGGTCAACC+CGG | 0.647374 | 5.4:+10357398 | MS.gene010347:CDS |
| CTGGATCGAAAGAAACATGT+GGG | 0.648357 | 5.4:+10359112 | MS.gene010347:CDS |
| GGAGCATTGATGTTTAGATG+GGG | 0.651394 | 5.4:+10359411 | MS.gene010347:CDS |
| TCTAAATTAGTCGTTGACAA+CGG | 0.655153 | 5.4:+10359441 | MS.gene010347:CDS |
| ACTTACTAACAGTATAAATG+TGG | 0.657066 | 5.4:-10359137 | None:intergenic |
| AGGGGTAGACTATGGTGACA+TGG | 0.659480 | 5.4:+10357565 | MS.gene010347:CDS |
| TAGATGGACAAAGAATGCTA+AGG | 0.660597 | 5.4:+10359323 | MS.gene010347:CDS |
| CAAAGAGCACATGGACATTG+CGG | 0.663062 | 5.4:+10359473 | MS.gene010347:CDS |
| ACTGGATCGAAAGAAACATG+TGG | 0.663241 | 5.4:+10359111 | MS.gene010347:CDS |
| TAATGACTACAAAGAGCACA+TGG | 0.664831 | 5.4:+10359464 | MS.gene010347:CDS |
| AACATGGAAAATGATGGAAG+TGG | 0.670459 | 5.4:+10357341 | MS.gene010347:CDS |
| TGGTGCGAGTCCCAATATGT+CGG | 0.670798 | 5.4:-10359375 | None:intergenic |
| CTGAGGCGAATAGAAAGCGT+CGG | 0.671105 | 5.4:+10357855 | MS.gene010347:CDS |
| TGTCCATCTACTCAATACAA+GGG | 0.678539 | 5.4:-10359310 | None:intergenic |
| GATGAAGAAGTGGTAGACTC+TGG | 0.679358 | 5.4:+10357512 | MS.gene010347:CDS |
| AAACCTTGAAGAGGACGTGG+TGG | 0.680606 | 5.4:+10359551 | MS.gene010347:CDS |
| TAGGAAAATGAAAATAACTG+AGG | 0.682026 | 5.4:+10357838 | MS.gene010347:CDS |
| AGGGGTGAACTATGGTGACA+TGG | 0.685845 | 5.4:+10357430 | MS.gene010347:CDS |
| TCAACCCGGAGATGATGAAG+GGG | 0.696725 | 5.4:+10357412 | MS.gene010347:CDS |
| TGATAGTGCTGATGACATTG+CGG | 0.734087 | 5.4:+10357628 | MS.gene010347:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAACAATATGTTAAAAAG+TGG | + | chr5.4:10358055-10358074 | MS.gene010347:intron | 20.0% |
| !! | TTGTTAAAATGTTGTATTTC+AGG | + | chr5.4:10359826-10359845 | MS.gene010347:intron | 20.0% |
| !!! | ACATGTAAGTATATTTTAAG+CGG | + | chr5.4:10359755-10359774 | MS.gene010347:intron | 20.0% |
| ! | ACTTACTAACAGTATAAATG+TGG | - | chr5.4:10359140-10359159 | None:intergenic | 25.0% |
| ! | AGAAACATATATGAAGAGAA+AGG | + | chr5.4:10358774-10358793 | MS.gene010347:intron | 25.0% |
| ! | ATTAAATTATCTTCGTGGAT+TGG | + | chr5.4:10358213-10358232 | MS.gene010347:intron | 25.0% |
| ! | GATTGTAGTCAATTTATTGA+TGG | + | chr5.4:10357254-10357273 | MS.gene010347:CDS | 25.0% |
| ! | TAGGAAAATGAAAATAACTG+AGG | + | chr5.4:10357838-10357857 | MS.gene010347:CDS | 25.0% |
| ! | TATGAGTTCTATAAATCCTA+TGG | + | chr5.4:10357719-10357738 | MS.gene010347:CDS | 25.0% |
| ! | TTAAATTATCTTCGTGGATT+GGG | + | chr5.4:10358214-10358233 | MS.gene010347:intron | 25.0% |
| ! | TTTATACTGTTAGTAAGTAC+AGG | + | chr5.4:10359142-10359161 | MS.gene010347:CDS | 25.0% |
| !! | CATAACTCTACTATTGTTTT+TGG | + | chr5.4:10358424-10358443 | MS.gene010347:intron | 25.0% |
| !! | GAATTTAGAAAGTGTATGTT+GGG | + | chr5.4:10358670-10358689 | MS.gene010347:intron | 25.0% |
| !! | GATATGATAAAATTGGTTTC+CGG | + | chr5.4:10358125-10358144 | MS.gene010347:intron | 25.0% |
| !! | TGAATTTAGAAAGTGTATGT+TGG | + | chr5.4:10358669-10358688 | MS.gene010347:intron | 25.0% |
| !!! | ATTTGGAAACACTTGTTTTA+TGG | - | chr5.4:10358575-10358594 | None:intergenic | 25.0% |
| AAGAATGCTAAGGATGTATT+AGG | + | chr5.4:10359333-10359352 | MS.gene010347:CDS | 30.0% | |
| AAGTTGCTATATTGCAAATC+AGG | + | chr5.4:10357773-10357792 | MS.gene010347:CDS | 30.0% | |
| AATGAAGCATATATGCGATT+AGG | - | chr5.4:10358088-10358107 | None:intergenic | 30.0% | |
| AATGGTAACATGGAAAATGA+TGG | + | chr5.4:10357335-10357354 | MS.gene010347:CDS | 30.0% | |
| ACCTGAAAATTTCTTCTGAA+GGG | - | chr5.4:10359200-10359219 | None:intergenic | 30.0% | |
| ATAATCAATTAGCGAGACAA+CGG | + | chr5.4:10358161-10358180 | MS.gene010347:intron | 30.0% | |
| CGTCTTGATTACCAAATTTA+TGG | + | chr5.4:10358322-10358341 | MS.gene010347:intron | 30.0% | |
| CTAAATTCATTCACAAATGC+AGG | - | chr5.4:10358658-10358677 | None:intergenic | 30.0% | |
| GATGAAGAAGTAGTAAACTA+TGG | + | chr5.4:10357467-10357486 | MS.gene010347:CDS | 30.0% | |
| TCTAAATTAGTCGTTGACAA+CGG | + | chr5.4:10359441-10359460 | MS.gene010347:CDS | 30.0% | |
| TCTGCATTAAATTATCTTCG+TGG | + | chr5.4:10358208-10358227 | MS.gene010347:intron | 30.0% | |
| TTTGTAAGGAGAATTGAGTT+TGG | + | chr5.4:10357680-10357699 | MS.gene010347:CDS | 30.0% | |
| ! | ATATATGAAGAGAAAGGCAT+GGG | + | chr5.4:10358780-10358799 | MS.gene010347:intron | 30.0% |
| ! | CATGTTTTCTTATTATGACC+AGG | - | chr5.4:10359690-10359709 | None:intergenic | 30.0% |
| ! | TATTATGCCTCTCTTTTGTT+CGG | - | chr5.4:10359517-10359536 | None:intergenic | 30.0% |
| ! | TTTTCCTATATCCTTCTCTA+TGG | - | chr5.4:10357826-10357845 | None:intergenic | 30.0% |
| !! | GCTGAAAATGTTGATTCATT+TGG | + | chr5.4:10358727-10358746 | MS.gene010347:intron | 30.0% |
| !!! | AACTCTACTATTGTTTTTGG+TGG | + | chr5.4:10358427-10358446 | MS.gene010347:intron | 30.0% |
| AAAACATGTTTGCGAAGAAC+GGG | + | chr5.4:10359702-10359721 | MS.gene010347:CDS | 35.0% | |
| AATCACTTTCAAAGTCTGCT+TGG | - | chr5.4:10358969-10358988 | None:intergenic | 35.0% | |
| AATCCCTTGTATTGAGTAGA+TGG | + | chr5.4:10359307-10359326 | MS.gene010347:CDS | 35.0% | |
| AATGGTGAGTTTGAAGAAGA+TGG | + | chr5.4:10357380-10357399 | MS.gene010347:CDS | 35.0% | |
| ACATTTGTTTGCCATAGAGA+AGG | + | chr5.4:10357812-10357831 | MS.gene010347:CDS | 35.0% | |
| AGAACTCATATGCAATCTCT+AGG | - | chr5.4:10357709-10357728 | None:intergenic | 35.0% | |
| AGAAGGAAGAAACTTATGTC+TGG | + | chr5.4:10358467-10358486 | MS.gene010347:intron | 35.0% | |
| AGTAGTAAACTATGGTGACA+TGG | + | chr5.4:10357475-10357494 | MS.gene010347:CDS | 35.0% | |
| AGTGTGCTTGAAAAACATCA+TGG | - | chr5.4:10358251-10358270 | None:intergenic | 35.0% | |
| ATTGATGGAAGTCATGAAGA+AGG | + | chr5.4:10357269-10357288 | MS.gene010347:CDS | 35.0% | |
| CACAGTCTATGATAAGCATT+TGG | - | chr5.4:10358592-10358611 | None:intergenic | 35.0% | |
| CACCTGAAAATTTCTTCTGA+AGG | - | chr5.4:10359201-10359220 | None:intergenic | 35.0% | |
| CACTATCAACTTGGATATGT+TGG | - | chr5.4:10357616-10357635 | None:intergenic | 35.0% | |
| CATATATGAAGAGAAAGGCA+TGG | + | chr5.4:10358779-10358798 | MS.gene010347:intron | 35.0% | |
| GAAAACATGTTTGCGAAGAA+CGG | + | chr5.4:10359701-10359720 | MS.gene010347:CDS | 35.0% | |
| GAAGGAAGAAACTTATGTCT+GGG | + | chr5.4:10358468-10358487 | MS.gene010347:intron | 35.0% | |
| GATTATACAGATCTTTCCTC+CGG | - | chr5.4:10358147-10358166 | None:intergenic | 35.0% | |
| GCAGGAGGATATGATAAAAT+TGG | + | chr5.4:10358118-10358137 | MS.gene010347:intron | 35.0% | |
| GTATTAGGTAGCATCTCAAA+TGG | + | chr5.4:10359348-10359367 | MS.gene010347:CDS | 35.0% | |
| GTGTGCTTGAAAAACATCAT+GGG | - | chr5.4:10358250-10358269 | None:intergenic | 35.0% | |
| TAAACAGTTTCACAAATCGC+TGG | + | chr5.4:10357927-10357946 | MS.gene010347:intron | 35.0% | |
| TACAAGATTCCCTAAACTTG+AGG | + | chr5.4:10359008-10359027 | MS.gene010347:intron | 35.0% | |
| TAGATGGACAAAGAATGCTA+AGG | + | chr5.4:10359323-10359342 | MS.gene010347:CDS | 35.0% | |
| TGTCCATCTACTCAATACAA+GGG | - | chr5.4:10359313-10359332 | None:intergenic | 35.0% | |
| TGTTCATTCTCGTTACAACT+TGG | + | chr5.4:10358888-10358907 | MS.gene010347:intron | 35.0% | |
| TTGATGGAAGTCATGAAGAA+GGG | + | chr5.4:10357270-10357289 | MS.gene010347:CDS | 35.0% | |
| TTGGATTGCATGACAACAAT+TGG | + | chr5.4:10358746-10358765 | MS.gene010347:intron | 35.0% | |
| TTGTCCATCTACTCAATACA+AGG | - | chr5.4:10359314-10359333 | None:intergenic | 35.0% | |
| TTTGCCATAGAGAAGGATAT+AGG | + | chr5.4:10357819-10357838 | MS.gene010347:CDS | 35.0% | |
| ! | AACATGGAAAATGATGGAAG+TGG | + | chr5.4:10357341-10357360 | MS.gene010347:CDS | 35.0% |
| ! | ACCCTTCAGAAGAAATTTTC+AGG | + | chr5.4:10359196-10359215 | MS.gene010347:CDS | 35.0% |
| ! | ATGAGATTGGAGAATTTTCC+AGG | + | chr5.4:10358698-10358717 | MS.gene010347:intron | 35.0% |
| ! | ATGATAAAATTGGTTTCCGG+AGG | + | chr5.4:10358128-10358147 | MS.gene010347:intron | 35.0% |
| ! | GCAGACTTTGAAAGTGATTA+TGG | + | chr5.4:10358970-10358989 | MS.gene010347:intron | 35.0% |
| ! | TAATGACTACAAAGAGCACA+TGG | + | chr5.4:10359464-10359483 | MS.gene010347:CDS | 35.0% |
| ! | TGAGCATATCATTGCAGTTT+TGG | + | chr5.4:10359257-10359276 | MS.gene010347:CDS | 35.0% |
| !!! | AAATTTTCAGGTGTGCTTGT+CGG | + | chr5.4:10359208-10359227 | MS.gene010347:CDS | 35.0% |
| AAATCCTATGGAAGAGCGAA+TGG | + | chr5.4:10357731-10357750 | MS.gene010347:CDS | 40.0% | |
| AAATGGTCGTCCGACATATT+GGG | + | chr5.4:10359365-10359384 | MS.gene010347:CDS | 40.0% | |
| AAGATGTTAGGCTTGAAGAG+GGG | + | chr5.4:10357306-10357325 | MS.gene010347:CDS | 40.0% | |
| ACACCAGCAAACACAACTAA+AGG | - | chr5.4:10358397-10358416 | None:intergenic | 40.0% | |
| ACTGCAATGATATGCTCACA+TGG | - | chr5.4:10359255-10359274 | None:intergenic | 40.0% | |
| ACTGGATCGAAAGAAACATG+TGG | + | chr5.4:10359111-10359130 | MS.gene010347:CDS | 40.0% | |
| AGAAGATGTTAGGCTTGAAG+AGG | + | chr5.4:10357304-10357323 | MS.gene010347:CDS | 40.0% | |
| AGATGGAAGTGATGAAGAAG+TGG | + | chr5.4:10357502-10357521 | MS.gene010347:CDS | 40.0% | |
| AGCTATTGTTGCTGATGAGA+AGG | + | chr5.4:10358450-10358469 | MS.gene010347:intron | 40.0% | |
| ATAAACTGCATAAACTCCGC+CGG | - | chr5.4:10359860-10359879 | None:intergenic | 40.0% | |
| ATCACCACATGCAGAACAAT+GGG | - | chr5.4:10359667-10359686 | None:intergenic | 40.0% | |
| ATGTTGGGTGACTATGAGAT+TGG | + | chr5.4:10358685-10358704 | MS.gene010347:intron | 40.0% | |
| CAAACACAACTAAAGGGCAA+TGG | - | chr5.4:10358390-10358409 | None:intergenic | 40.0% | |
| CACCAGCAAACACAACTAAA+GGG | - | chr5.4:10358396-10358415 | None:intergenic | 40.0% | |
| CAGACATTGGAGAAGATGTT+AGG | + | chr5.4:10357294-10357313 | MS.gene010347:CDS | 40.0% | |
| CCACTAGTGGAACAAACAAT+AGG | + | chr5.4:10359634-10359653 | MS.gene010347:CDS | 40.0% | |
| CCTATTGTTTGTTCCACTAG+TGG | - | chr5.4:10359637-10359656 | None:intergenic | 40.0% | |
| CTACTCAATACAAGGGATTC+AGG | - | chr5.4:10359306-10359325 | None:intergenic | 40.0% | |
| CTGGATCGAAAGAAACATGT+GGG | + | chr5.4:10359112-10359131 | MS.gene010347:CDS | 40.0% | |
| GAAGATGTTAGGCTTGAAGA+GGG | + | chr5.4:10357305-10357324 | MS.gene010347:CDS | 40.0% | |
| GCTTCATTTGCAAATCAAGC+AGG | + | chr5.4:10358100-10358119 | MS.gene010347:intron | 40.0% | |
| GTCGCATTTGATGCAACATA+TGG | + | chr5.4:10358352-10358371 | MS.gene010347:intron | 40.0% | |
| GTGGATGTCAAGCTATGTTT+CGG | + | chr5.4:10357897-10357916 | MS.gene010347:CDS | 40.0% | |
| GTTTAGGGGCTCTATTTGTA+AGG | + | chr5.4:10357666-10357685 | MS.gene010347:CDS | 40.0% | |
| TAACACGACAAACCTTGAAG+AGG | + | chr5.4:10359542-10359561 | MS.gene010347:CDS | 40.0% | |
| TATGGTGACATGGAAGAAGA+TGG | + | chr5.4:10357440-10357459 | MS.gene010347:CDS | 40.0% | |
| TCATTTGCAAATCAAGCAGG+AGG | + | chr5.4:10358103-10358122 | MS.gene010347:intron | 40.0% | |
| TGACATCCACATCGAGTATA+AGG | - | chr5.4:10357887-10357906 | None:intergenic | 40.0% | |
| TGATGGAAGTCATGAAGAAG+GGG | + | chr5.4:10357271-10357290 | MS.gene010347:CDS | 40.0% | |
| TGGATGTCAAGCTATGTTTC+GGG | + | chr5.4:10357898-10357917 | MS.gene010347:CDS | 40.0% | |
| TGTCATCAGCACTATCAACT+TGG | - | chr5.4:10357625-10357644 | None:intergenic | 40.0% | |
| TGTTAGTAAGTACAGGAGAC+CGG | + | chr5.4:10359149-10359168 | MS.gene010347:CDS | 40.0% | |
| TTGAAAGCCGAACAAAAGAG+AGG | + | chr5.4:10359507-10359526 | MS.gene010347:CDS | 40.0% | |
| TTTGAAGAAGATGGAGGTAG+TGG | + | chr5.4:10357389-10357408 | MS.gene010347:CDS | 40.0% | |
| ! | AATGGATTCACAGTTCGCAA+AGG | + | chr5.4:10357749-10357768 | MS.gene010347:CDS | 40.0% |
| ! | GTAGACTACAACACCTGTTT+TGG | + | chr5.4:10358284-10358303 | MS.gene010347:intron | 40.0% |
| ! | TGGAGAATTTTCCAGGAAGT+GGG | + | chr5.4:10358705-10358724 | MS.gene010347:intron | 40.0% |
| ! | TTGGAGAATTTTCCAGGAAG+TGG | + | chr5.4:10358704-10358723 | MS.gene010347:intron | 40.0% |
| ! | TTTTTCCGTCACACCAAAAC+AGG | - | chr5.4:10358300-10358319 | None:intergenic | 40.0% |
| !! | AAGCACACTACTGATTCTAC+AGG | + | chr5.4:10358262-10358281 | MS.gene010347:intron | 40.0% |
| !! | ACGGAGCATTGATGTTTAGA+TGG | + | chr5.4:10359409-10359428 | MS.gene010347:CDS | 40.0% |
| !! | CGGAGCATTGATGTTTAGAT+GGG | + | chr5.4:10359410-10359429 | MS.gene010347:CDS | 40.0% |
| !! | GAGCATTGATGTTTAGATGG+GGG | + | chr5.4:10359412-10359431 | MS.gene010347:CDS | 40.0% |
| !! | GGAGCATTGATGTTTAGATG+GGG | + | chr5.4:10359411-10359430 | MS.gene010347:CDS | 40.0% |
| !! | TGATAGTGCTGATGACATTG+CGG | + | chr5.4:10357628-10357647 | MS.gene010347:CDS | 40.0% |
| !! | TTCTGAAGCCTGCAAAAAAG+TGG | - | chr5.4:10358825-10358844 | None:intergenic | 40.0% |
| AAATGCAGGATCGCCTATGT+TGG | - | chr5.4:10358644-10358663 | None:intergenic | 45.0% | |
| AAGATGGAAGTGAGGCAGAA+GGG | + | chr5.4:10357546-10357565 | MS.gene010347:CDS | 45.0% | |
| AATCAACCGATCTTCTGCCA+TGG | + | chr5.4:10359083-10359102 | MS.gene010347:CDS | 45.0% | |
| ACCGCATGAAGTTGAGACAA+CGG | - | chr5.4:10358936-10358955 | None:intergenic | 45.0% | |
| ACCGTTGTCTCAACTTCATG+CGG | + | chr5.4:10358932-10358951 | MS.gene010347:intron | 45.0% | |
| AGAACTACATCTCGATGCGA+GGG | + | chr5.4:10358841-10358860 | MS.gene010347:intron | 45.0% | |
| AGATGTTAGGCTTGAAGAGG+GGG | + | chr5.4:10357307-10357326 | MS.gene010347:CDS | 45.0% | |
| ATACTAGCTCATGGTTGTGC+TGG | - | chr5.4:10357973-10357992 | None:intergenic | 45.0% | |
| ATGCTCCGTATCTTGTTGCA+TGG | - | chr5.4:10359398-10359417 | None:intergenic | 45.0% | |
| CAAATGGTCGTCCGACATAT+TGG | + | chr5.4:10359364-10359383 | MS.gene010347:CDS | 45.0% | |
| CAACTTCATGCGGTATAGAG+AGG | + | chr5.4:10358942-10358961 | MS.gene010347:intron | 45.0% | |
| CCAACTGCTGTAATCACTGA+TGG | + | chr5.4:10358529-10358548 | MS.gene010347:intron | 45.0% | |
| CCAAGACCTTATACTCGATG+TGG | + | chr5.4:10357878-10357897 | MS.gene010347:CDS | 45.0% | |
| CCACATCGAGTATAAGGTCT+TGG | - | chr5.4:10357881-10357900 | None:intergenic | 45.0% | |
| CCATCAGTGATTACAGCAGT+TGG | - | chr5.4:10358532-10358551 | None:intergenic | 45.0% | |
| CGACTACGTCGCCATAAATT+TGG | - | chr5.4:10358336-10358355 | None:intergenic | 45.0% | |
| CTAGTATCGCAGGAACATTG+TGG | + | chr5.4:10357986-10358005 | MS.gene010347:intron | 45.0% | |
| CTTATCATAGACTGTGTGCG+TGG | + | chr5.4:10358596-10358615 | MS.gene010347:intron | 45.0% | |
| CTTATGTCTGGGTGCTTTCA+CGG | + | chr5.4:10358479-10358498 | MS.gene010347:intron | 45.0% | |
| CTTGAAGAGGGGGAATACAA+TGG | + | chr5.4:10357317-10357336 | MS.gene010347:CDS | 45.0% | |
| CTTGGAAGAAGATGGAAGTG+AGG | + | chr5.4:10357538-10357557 | MS.gene010347:CDS | 45.0% | |
| GAATCCATTCGCTCTTCCAT+AGG | - | chr5.4:10357738-10357757 | None:intergenic | 45.0% | |
| GATCACCACATGCAGAACAA+TGG | - | chr5.4:10359668-10359687 | None:intergenic | 45.0% | |
| GATGAAGAAGTGGTAGACTC+TGG | + | chr5.4:10357512-10357531 | MS.gene010347:CDS | 45.0% | |
| GATGATGAAGGGGTGAACTA+TGG | + | chr5.4:10357422-10357441 | MS.gene010347:CDS | 45.0% | |
| GATGGAAGTGGTTACGAAAG+CGG | + | chr5.4:10357353-10357372 | MS.gene010347:CDS | 45.0% | |
| GGGAATCTTGTAATGAGAGC+AGG | - | chr5.4:10359000-10359019 | None:intergenic | 45.0% | |
| GGGGGAATACAATGGTAACA+TGG | + | chr5.4:10357325-10357344 | MS.gene010347:CDS | 45.0% | |
| GGTGAGTTTGAAGAAGATGG+AGG | + | chr5.4:10357383-10357402 | MS.gene010347:CDS | 45.0% | |
| TAAATGATACACGCCACTCC+CGG | - | chr5.4:10359176-10359195 | None:intergenic | 45.0% | |
| TCGCACCATGCAACAAGATA+CGG | + | chr5.4:10359390-10359409 | MS.gene010347:CDS | 45.0% | |
| TCTGTCAGAACCAAAGGTAG+AGG | + | chr5.4:10359597-10359616 | MS.gene010347:CDS | 45.0% | |
| TGCCCTTTAGTTGTGTTTGC+TGG | + | chr5.4:10358391-10358410 | MS.gene010347:intron | 45.0% | |
| TGTATTTCAGGAACATGCGC+CGG | + | chr5.4:10359838-10359857 | MS.gene010347:intron | 45.0% | |
| TTACGACCATGGCAGAAGAT+CGG | - | chr5.4:10359092-10359111 | None:intergenic | 45.0% | |
| TTTCGATCCAGTTACGACCA+TGG | - | chr5.4:10359103-10359122 | None:intergenic | 45.0% | |
| ! | AACATTTTCAGCCCACTTCC+TGG | - | chr5.4:10358719-10358738 | None:intergenic | 45.0% |
| ! | CAAAGAGCACATGGACATTG+CGG | + | chr5.4:10359473-10359492 | MS.gene010347:CDS | 45.0% |
| ! | TCTGGTGACTTGGAAGAAGA+TGG | + | chr5.4:10357530-10357549 | MS.gene010347:CDS | 45.0% |
| !! | ATTGGACCTGACTGGTTTAG+GGG | + | chr5.4:10357652-10357671 | MS.gene010347:CDS | 45.0% |
| !! | CATTGGACCTGACTGGTTTA+GGG | + | chr5.4:10357651-10357670 | MS.gene010347:CDS | 45.0% |
| !! | CCTGTTTCTGTCAGAACCAA+AGG | + | chr5.4:10359591-10359610 | MS.gene010347:CDS | 45.0% |
| !! | CCTTTGGTTCTGACAGAAAC+AGG | - | chr5.4:10359594-10359613 | None:intergenic | 45.0% |
| !!! | ATACGTGGCCACTTTTTTGC+AGG | + | chr5.4:10358814-10358833 | MS.gene010347:intron | 45.0% |
| !!! | CAACACCTGTTTTGGTGTGA+CGG | + | chr5.4:10358292-10358311 | MS.gene010347:intron | 45.0% |
| AAACCTTGAAGAGGACGTGG+TGG | + | chr5.4:10359551-10359570 | MS.gene010347:CDS | 50.0% | |
| AACACCACCACCTCTACCTT+TGG | - | chr5.4:10359610-10359629 | None:intergenic | 50.0% | |
| ACATGTTTGCGAAGAACGGG+TGG | + | chr5.4:10359705-10359724 | MS.gene010347:CDS | 50.0% | |
| AGAACCAAAGGTAGAGGTGG+TGG | + | chr5.4:10359603-10359622 | MS.gene010347:CDS | 50.0% | |
| AGATGGAAGTGAGGCAGAAG+GGG | + | chr5.4:10357547-10357566 | MS.gene010347:CDS | 50.0% | |
| AGGGGTAGACTATGGTGACA+TGG | + | chr5.4:10357565-10357584 | MS.gene010347:CDS | 50.0% | |
| AGGGGTGAACTATGGTGACA+TGG | + | chr5.4:10357430-10357449 | MS.gene010347:CDS | 50.0% | |
| AGGGGTTGCATTCAGAGATG+GGG | + | chr5.4:10358860-10358879 | MS.gene010347:intron | 50.0% | |
| AGTGGTAGACTCTGGTGACT+TGG | + | chr5.4:10357520-10357539 | MS.gene010347:CDS | 50.0% | |
| ATAGAGCCCCTAAACCAGTC+AGG | - | chr5.4:10357661-10357680 | None:intergenic | 50.0% | |
| CAACCATGAGCTAGTATCGC+AGG | + | chr5.4:10357976-10357995 | MS.gene010347:intron | 50.0% | |
| CACCAGAGGCCTCAAGTTTA+GGG | - | chr5.4:10359020-10359039 | None:intergenic | 50.0% | |
| CAGAACTACATCTCGATGCG+AGG | + | chr5.4:10358840-10358859 | MS.gene010347:intron | 50.0% | |
| CATGAAGAAGGGGCAGACAT+TGG | + | chr5.4:10357281-10357300 | MS.gene010347:CDS | 50.0% | |
| CGCAATGCATCGTCCAACAT+AGG | + | chr5.4:10358628-10358647 | MS.gene010347:intron | 50.0% | |
| CGGTTCTTGGAAGCAATGTC+TGG | + | chr5.4:10358499-10358518 | MS.gene010347:intron | 50.0% | |
| CGTAAATACCTTCGCACCAG+AGG | - | chr5.4:10359034-10359053 | None:intergenic | 50.0% | |
| GAACTACATCTCGATGCGAG+GGG | + | chr5.4:10358842-10358861 | MS.gene010347:intron | 50.0% | |
| GAAGATGGAAGTGAGGCAGA+AGG | + | chr5.4:10357545-10357564 | MS.gene010347:CDS | 50.0% | |
| GACAAACCTTGAAGAGGACG+TGG | + | chr5.4:10359548-10359567 | MS.gene010347:CDS | 50.0% | |
| GAGGGGTTGCATTCAGAGAT+GGG | + | chr5.4:10358859-10358878 | MS.gene010347:intron | 50.0% | |
| GGTTACGAAAGCGGAGACAA+TGG | + | chr5.4:10357362-10357381 | MS.gene010347:CDS | 50.0% | |
| GTCAACCCGGAGATGATGAA+GGG | + | chr5.4:10357411-10357430 | MS.gene010347:CDS | 50.0% | |
| GTCAGAACCAAAGGTAGAGG+TGG | + | chr5.4:10359600-10359619 | MS.gene010347:CDS | 50.0% | |
| GTTCACCCCTTCATCATCTC+CGG | - | chr5.4:10357420-10357439 | None:intergenic | 50.0% | |
| GTTCCTGCGATACTAGCTCA+TGG | - | chr5.4:10357982-10358001 | None:intergenic | 50.0% | |
| TCAACCCGGAGATGATGAAG+GGG | + | chr5.4:10357412-10357431 | MS.gene010347:CDS | 50.0% | |
| TCTTCTGCCATGGTCGTAAC+TGG | + | chr5.4:10359093-10359112 | MS.gene010347:CDS | 50.0% | |
| TGCTGATGACATTGCGGCAT+TGG | + | chr5.4:10357634-10357653 | MS.gene010347:CDS | 50.0% | |
| TGGGCAACAGCACATATACG+TGG | + | chr5.4:10358799-10358818 | MS.gene010347:intron | 50.0% | |
| TGGTGCGAGTCCCAATATGT+CGG | - | chr5.4:10359378-10359397 | None:intergenic | 50.0% | |
| TGTCGGAGGATGGAGTCATT+TGG | + | chr5.4:10359225-10359244 | MS.gene010347:CDS | 50.0% | |
| TGTTCTGCATGTGGTGATCC+TGG | + | chr5.4:10359669-10359688 | MS.gene010347:CDS | 50.0% | |
| TTCACCCCTTCATCATCTCC+GGG | - | chr5.4:10357419-10357438 | None:intergenic | 50.0% | |
| TTCCCTAAACTTGAGGCCTC+TGG | + | chr5.4:10359015-10359034 | MS.gene010347:intron | 50.0% | |
| ! | AAAGGTAGAGGTGGTGGTGT+TGG | + | chr5.4:10359609-10359628 | MS.gene010347:CDS | 50.0% |
| ! | CTGAGGCGAATAGAAAGCGT+CGG | + | chr5.4:10357855-10357874 | MS.gene010347:CDS | 50.0% |
| !! | GCATTGGACCTGACTGGTTT+AGG | + | chr5.4:10357650-10357669 | MS.gene010347:CDS | 50.0% |
| !!! | TTTTCAGGTGTGCTTGTCGG+AGG | + | chr5.4:10359211-10359230 | MS.gene010347:CDS | 50.0% |
| ATTTCAGGAACATGCGCCGG+CGG | + | chr5.4:10359841-10359860 | MS.gene010347:intron | 55.0% | |
| CGAGGGGTTGCATTCAGAGA+TGG | + | chr5.4:10358858-10358877 | MS.gene010347:intron | 55.0% | |
| CTGGGTGCTTTCACGGTTCT+TGG | + | chr5.4:10358486-10358505 | MS.gene010347:intron | 55.0% | |
| CTTCCACCACGTCCTCTTCA+AGG | - | chr5.4:10359557-10359576 | None:intergenic | 55.0% | |
| GAGGCAGAAGGGGTAGACTA+TGG | + | chr5.4:10357557-10357576 | MS.gene010347:CDS | 55.0% | |
| GCACCAGAGGCCTCAAGTTT+AGG | - | chr5.4:10359021-10359040 | None:intergenic | 55.0% | |
| GGTCAACCCGGAGATGATGA+AGG | + | chr5.4:10357410-10357429 | MS.gene010347:CDS | 55.0% | |
| GTAAGTACAGGAGACCGGAC+CGG | + | chr5.4:10359154-10359173 | MS.gene010347:CDS | 55.0% | |
| GTCGCCCATTGTTCTGCATG+TGG | + | chr5.4:10359660-10359679 | MS.gene010347:CDS | 55.0% | |
| TAAGTACAGGAGACCGGACC+GGG | + | chr5.4:10359155-10359174 | MS.gene010347:CDS | 55.0% | |
| ! | ATTGCGGCATTGGACCTGAC+TGG | + | chr5.4:10357644-10357663 | MS.gene010347:CDS | 55.0% |
| ! | GATGGAGGTAGTGGTCAACC+CGG | + | chr5.4:10357398-10357417 | MS.gene010347:CDS | 55.0% |
| ACTTGAGGCCTCTGGTGCGA+AGG | + | chr5.4:10359023-10359042 | MS.gene010347:intron | 60.0% | |
| CAGGTGTGCTTGTCGGAGGA+TGG | + | chr5.4:10359215-10359234 | MS.gene010347:CDS | 60.0% | |
| !! | GGTGGTGTTGGCTCCACTAG+TGG | + | chr5.4:10359621-10359640 | MS.gene010347:CDS | 60.0% |
| GATACACGCCACTCCCGGTC+CGG | - | chr5.4:10359171-10359190 | None:intergenic | 65.0% | |
| ACAGGAGACCGGACCGGGAG+TGG | + | chr5.4:10359160-10359179 | MS.gene010347:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 10357236 | 10359883 | 10357236 | ID=MS.gene010347 |
| chr5.4 | mRNA | 10357236 | 10359883 | 10357236 | ID=MS.gene010347.t1;Parent=MS.gene010347 |
| chr5.4 | exon | 10357236 | 10357919 | 10357236 | ID=MS.gene010347.t1.exon1;Parent=MS.gene010347.t1 |
| chr5.4 | CDS | 10357236 | 10357919 | 10357236 | ID=cds.MS.gene010347.t1;Parent=MS.gene010347.t1 |
| chr5.4 | exon | 10359078 | 10359758 | 10359078 | ID=MS.gene010347.t1.exon2;Parent=MS.gene010347.t1 |
| chr5.4 | CDS | 10359078 | 10359758 | 10359078 | ID=cds.MS.gene010347.t1;Parent=MS.gene010347.t1 |
| chr5.4 | exon | 10359848 | 10359883 | 10359848 | ID=MS.gene010347.t1.exon3;Parent=MS.gene010347.t1 |
| chr5.4 | CDS | 10359848 | 10359883 | 10359848 | ID=cds.MS.gene010347.t1;Parent=MS.gene010347.t1 |
| Gene Sequence |
| Protein sequence |
