Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010368.t1 | XP_003611755.1 | 80.8 | 250 | 27 | 2 | 1 | 250 | 1 | 229 | 4.00E-103 | 384.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010368.t1 | G7K6Q6 | 80.8 | 250 | 27 | 2 | 1 | 250 | 1 | 229 | 2.9e-103 | 384.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene010368.t1 | TF | Trihelix |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010368.t1 | MTR_5g017500 | 84.400 | 250 | 18 | 3 | 1 | 250 | 1 | 229 | 2.04e-145 | 406 |
MS.gene010368.t1 | MTR_4g117990 | 46.789 | 109 | 56 | 1 | 14 | 122 | 36 | 142 | 2.22e-27 | 107 |
MS.gene010368.t1 | MTR_7g081190 | 50.000 | 102 | 48 | 2 | 19 | 118 | 43 | 143 | 4.25e-22 | 94.4 |
MS.gene010368.t1 | MTR_1g061600 | 30.370 | 135 | 75 | 4 | 22 | 143 | 133 | 261 | 5.33e-16 | 77.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010368.t1 | AT3G24860 | 34.201 | 269 | 134 | 6 | 11 | 249 | 54 | 309 | 8.57e-44 | 150 |
MS.gene010368.t1 | AT2G44730 | 43.478 | 115 | 55 | 2 | 9 | 119 | 51 | 159 | 3.47e-22 | 94.4 |
MS.gene010368.t1 | AT3G54390 | 27.966 | 236 | 131 | 8 | 22 | 233 | 38 | 258 | 2.39e-14 | 71.6 |
MS.gene010368.t1 | AT3G10030 | 34.653 | 101 | 60 | 2 | 22 | 122 | 161 | 255 | 2.51e-14 | 72.4 |
MS.gene010368.t1 | AT3G10030 | 34.653 | 101 | 60 | 2 | 22 | 122 | 161 | 255 | 3.11e-14 | 72.0 |
MS.gene010368.t1 | AT3G54390 | 27.848 | 237 | 132 | 8 | 22 | 234 | 54 | 275 | 3.16e-14 | 71.2 |
MS.gene010368.t1 | AT3G58630 | 29.915 | 117 | 69 | 2 | 22 | 128 | 26 | 139 | 3.50e-13 | 68.2 |
MS.gene010368.t1 | AT3G58630 | 29.915 | 117 | 69 | 2 | 22 | 128 | 26 | 139 | 3.92e-13 | 68.2 |
Find 80 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCTTGTTACTGTTGGTTTC+TGG | 0.153076 | 5.4:-10607019 | None:intergenic |
GTAGGATCTGATGAGGTTAA+TGG | 0.242282 | 5.4:-10606616 | None:intergenic |
GATTCTATTGGAAAGGCATT+TGG | 0.282980 | 5.4:+10607257 | MS.gene010368:CDS |
TGGAGGATTGTTGATTCTAT+TGG | 0.285128 | 5.4:+10607245 | MS.gene010368:CDS |
ACGACATTGAAGAGCGGTTT+TGG | 0.311108 | 5.4:-10606745 | None:intergenic |
TGATGAGGTTAATGGTTTCT+TGG | 0.328328 | 5.4:-10606608 | None:intergenic |
TCTTGGTGGGTCCATGGAAT+GGG | 0.347722 | 5.4:-10606591 | None:intergenic |
TTCTTGGTGGGTCCATGGAA+TGG | 0.347924 | 5.4:-10606592 | None:intergenic |
CCGTCGCTATCGTCGGAGAT+AGG | 0.363885 | 5.4:-10606930 | None:intergenic |
GATTAGAGATGGAGAATAAG+AGG | 0.371813 | 5.4:+10607198 | MS.gene010368:CDS |
ATTCTATTGGAAAGGCATTT+GGG | 0.373738 | 5.4:+10607258 | MS.gene010368:CDS |
TTTCAGATCGGTGGCGTTGA+CGG | 0.386482 | 5.4:-10606785 | None:intergenic |
ATGGGTTGAGGTTTCTTTGT+GGG | 0.390802 | 5.4:-10606573 | None:intergenic |
GAAATGGTATTCACTCAAAC+GGG | 0.393548 | 5.4:+10606644 | MS.gene010368:CDS |
GCCCACTCCGCGGCAGTCAA+TGG | 0.394607 | 5.4:+10606667 | MS.gene010368:CDS |
CCGCCGTTTCTTCTCGATCC+TGG | 0.399673 | 5.4:+10606832 | MS.gene010368:CDS |
GAAAGAGGTCGGACGGAGAT+AGG | 0.403361 | 5.4:-10606897 | None:intergenic |
CCCATTGACTGCCGCGGAGT+GGG | 0.424106 | 5.4:-10606668 | None:intergenic |
TGCAGAGAGGATTGTAGGGT+TGG | 0.427539 | 5.4:+10607133 | MS.gene010368:CDS |
ATGGTTTCTTGGTGGGTCCA+TGG | 0.435098 | 5.4:-10606597 | None:intergenic |
ATAGTGCTGCTAGGTCTGTT+AGG | 0.441997 | 5.4:+10606970 | MS.gene010368:CDS |
GGAGGAGGAAGACGAAGAGG+AGG | 0.442580 | 5.4:+10607070 | MS.gene010368:CDS |
TGGGTCCATGGAATGGGTTG+AGG | 0.452120 | 5.4:-10606585 | None:intergenic |
CCCACTCCGCGGCAGTCAAT+GGG | 0.457508 | 5.4:+10606668 | MS.gene010368:CDS |
AACTGATGATGAAGAGGAGG+AGG | 0.459365 | 5.4:+10607055 | MS.gene010368:CDS |
CGTTGTTGTCTTGTTACTGT+TGG | 0.464913 | 5.4:-10607026 | None:intergenic |
TCAGATCCTACCAAGAGAAA+TGG | 0.466613 | 5.4:+10606628 | MS.gene010368:CDS |
AGAGAGGTTTAGATTAGAGA+TGG | 0.466781 | 5.4:+10607187 | MS.gene010368:CDS |
TTGAGGTTTCTTTGTGGGAA+GGG | 0.468718 | 5.4:-10606568 | None:intergenic |
TCCCATTGACTGCCGCGGAG+TGG | 0.479922 | 5.4:-10606669 | None:intergenic |
AGAAATGGTATTCACTCAAA+CGG | 0.486979 | 5.4:+10606643 | MS.gene010368:CDS |
GTATGATACTTGAATCTCAA+TGG | 0.493726 | 5.4:+10607225 | MS.gene010368:CDS |
GAGGAGGAAGACGAAGAGGA+GGG | 0.496326 | 5.4:+10607071 | MS.gene010368:CDS |
GAGGTTAATGGTTTCTTGGT+GGG | 0.497980 | 5.4:-10606604 | None:intergenic |
CGTCGCTATCGTCGGAGATA+GGG | 0.505081 | 5.4:-10606929 | None:intergenic |
GGAAGGGAAAGAGTGAGTTC+TGG | 0.514086 | 5.4:-10606552 | None:intergenic |
TGAGTGAATACCATTTCTCT+TGG | 0.519977 | 5.4:-10606638 | None:intergenic |
TGAATACCATTTCTCTTGGT+AGG | 0.521476 | 5.4:-10606634 | None:intergenic |
GATTGTTGATTCTATTGGAA+AGG | 0.528242 | 5.4:+10607250 | MS.gene010368:CDS |
AGACGAAGAGGAGGGAGTGA+TGG | 0.530323 | 5.4:+10607079 | MS.gene010368:CDS |
TGAGGTTAATGGTTTCTTGG+TGG | 0.535347 | 5.4:-10606605 | None:intergenic |
CTGCCAGGATCGAGAAGAAA+CGG | 0.535951 | 5.4:-10606835 | None:intergenic |
TCTTCAATGTCGTCATAAGA+TGG | 0.539576 | 5.4:+10606755 | MS.gene010368:CDS |
AATGGGTTGAGGTTTCTTTG+TGG | 0.544865 | 5.4:-10606574 | None:intergenic |
AGAAACCTCAACCCATTCCA+TGG | 0.546082 | 5.4:+10606580 | MS.gene010368:CDS |
TAAGAAGATGGAGATGATGA+AGG | 0.556347 | 5.4:+10607160 | MS.gene010368:CDS |
AGAGGAGGAGGAAGACGAAG+AGG | 0.557060 | 5.4:+10607067 | MS.gene010368:CDS |
CGGCAGTCAATGGGAAGAAG+TGG | 0.558439 | 5.4:+10606677 | MS.gene010368:CDS |
ATAGGGTGCTTCTGAGAAAG+AGG | 0.564002 | 5.4:-10606912 | None:intergenic |
GTTGAGGTTTCTTTGTGGGA+AGG | 0.565690 | 5.4:-10606569 | None:intergenic |
GGTCGGACGGAGATAGGTAA+AGG | 0.569635 | 5.4:-10606891 | None:intergenic |
AGGGTTGGAAAATAAGAAGA+TGG | 0.571203 | 5.4:+10607148 | MS.gene010368:CDS |
GGATCGAGAAGAAACGGCGG+AGG | 0.574532 | 5.4:-10606829 | None:intergenic |
CTTCTTCCCATTGACTGCCG+CGG | 0.577676 | 5.4:-10606674 | None:intergenic |
CTGCTAGGTCTGTTAGGTCA+AGG | 0.578720 | 5.4:+10606976 | MS.gene010368:CDS |
CCGACGATAGCGACGGTGAG+AGG | 0.582725 | 5.4:+10606937 | MS.gene010368:CDS |
CCTCTCACCGTCGCTATCGT+CGG | 0.588877 | 5.4:-10606937 | None:intergenic |
TCTCTTGGTAGGATCTGATG+AGG | 0.595101 | 5.4:-10606623 | None:intergenic |
CGACGATAGCGACGGTGAGA+GGG | 0.604292 | 5.4:+10606938 | MS.gene010368:CDS |
AGTGAGTTCTGGTGAAGCGG+TGG | 0.606604 | 5.4:-10606541 | None:intergenic |
CATGAGACGAAAATACTGCC+AGG | 0.607104 | 5.4:-10606850 | None:intergenic |
CGGAGGAAGTAGCGGTGAGG+CGG | 0.610003 | 5.4:-10606812 | None:intergenic |
AAGAGTGAGTTCTGGTGAAG+CGG | 0.610541 | 5.4:-10606544 | None:intergenic |
CTTCTGAGAAAGAGGTCGGA+CGG | 0.613702 | 5.4:-10606904 | None:intergenic |
GGTGCTTCTGAGAAAGAGGT+CGG | 0.636676 | 5.4:-10606908 | None:intergenic |
AGATGATGAAGGAAACAGAG+AGG | 0.638850 | 5.4:+10607171 | MS.gene010368:CDS |
AGAAACGGCGGAGGAAGTAG+CGG | 0.642928 | 5.4:-10606820 | None:intergenic |
CTCAAACGGGGCCCACTCCG+CGG | 0.643190 | 5.4:+10606657 | MS.gene010368:CDS |
TGATGAAACTGATGATGAAG+AGG | 0.652723 | 5.4:+10607049 | MS.gene010368:CDS |
TGATACTTGAATCTCAATGG+AGG | 0.662965 | 5.4:+10607228 | MS.gene010368:CDS |
CTCATGGATGATCTTGAACG+CGG | 0.669974 | 5.4:+10606867 | MS.gene010368:CDS |
TGAAACTGATGATGAAGAGG+AGG | 0.676552 | 5.4:+10607052 | MS.gene010368:CDS |
CTTATGACGACATTGAAGAG+CGG | 0.678566 | 5.4:-10606751 | None:intergenic |
CCTATCTCCGACGATAGCGA+CGG | 0.701116 | 5.4:+10606930 | MS.gene010368:CDS |
GTAATCGTAGCCGCAACGAG+CGG | 0.705311 | 5.4:-10606712 | None:intergenic |
CGGCGGAGGAAGTAGCGGTG+AGG | 0.714161 | 5.4:-10606815 | None:intergenic |
GATGGCGAAGAGTTTGACAG+CGG | 0.738106 | 5.4:+10607097 | MS.gene010368:CDS |
CCAGGATCGAGAAGAAACGG+CGG | 0.744864 | 5.4:-10606832 | None:intergenic |
AAATGGTATTCACTCAAACG+GGG | 0.751020 | 5.4:+10606645 | MS.gene010368:CDS |
GTAGTCGTAGCCGCTCGTTG+CGG | 0.770618 | 5.4:+10606702 | MS.gene010368:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AGAAATGGTATTCACTCAAA+CGG | + | chr5.4:10606643-10606662 | MS.gene010368:CDS | 30.0% | |
GTATGATACTTGAATCTCAA+TGG | + | chr5.4:10607225-10607244 | MS.gene010368:CDS | 30.0% | |
!! | ATTCTATTGGAAAGGCATTT+GGG | + | chr5.4:10607258-10607277 | MS.gene010368:CDS | 30.0% |
!! | GATTGTTGATTCTATTGGAA+AGG | + | chr5.4:10607250-10607269 | MS.gene010368:CDS | 30.0% |
AAATGGTATTCACTCAAACG+GGG | + | chr5.4:10606645-10606664 | MS.gene010368:CDS | 35.0% | |
AGAGAGGTTTAGATTAGAGA+TGG | + | chr5.4:10607187-10607206 | MS.gene010368:CDS | 35.0% | |
AGGGTTGGAAAATAAGAAGA+TGG | + | chr5.4:10607148-10607167 | MS.gene010368:CDS | 35.0% | |
GAAATGGTATTCACTCAAAC+GGG | + | chr5.4:10606644-10606663 | MS.gene010368:CDS | 35.0% | |
GATTAGAGATGGAGAATAAG+AGG | + | chr5.4:10607198-10607217 | MS.gene010368:CDS | 35.0% | |
TAAGAAGATGGAGATGATGA+AGG | + | chr5.4:10607160-10607179 | MS.gene010368:CDS | 35.0% | |
TCTTCAATGTCGTCATAAGA+TGG | + | chr5.4:10606755-10606774 | MS.gene010368:CDS | 35.0% | |
TGAATACCATTTCTCTTGGT+AGG | - | chr5.4:10606637-10606656 | None:intergenic | 35.0% | |
TGAGTGAATACCATTTCTCT+TGG | - | chr5.4:10606641-10606660 | None:intergenic | 35.0% | |
TGATACTTGAATCTCAATGG+AGG | + | chr5.4:10607228-10607247 | MS.gene010368:CDS | 35.0% | |
TGATGAGGTTAATGGTTTCT+TGG | - | chr5.4:10606611-10606630 | None:intergenic | 35.0% | |
! | TGATGAAACTGATGATGAAG+AGG | + | chr5.4:10607049-10607068 | MS.gene010368:CDS | 35.0% |
!! | GATTCTATTGGAAAGGCATT+TGG | + | chr5.4:10607257-10607276 | MS.gene010368:CDS | 35.0% |
!! | TGGAGGATTGTTGATTCTAT+TGG | + | chr5.4:10607245-10607264 | MS.gene010368:CDS | 35.0% |
AGATGATGAAGGAAACAGAG+AGG | + | chr5.4:10607171-10607190 | MS.gene010368:CDS | 40.0% | |
CTTATGACGACATTGAAGAG+CGG | - | chr5.4:10606754-10606773 | None:intergenic | 40.0% | |
GAGGTTAATGGTTTCTTGGT+GGG | - | chr5.4:10606607-10606626 | None:intergenic | 40.0% | |
GTAGGATCTGATGAGGTTAA+TGG | - | chr5.4:10606619-10606638 | None:intergenic | 40.0% | |
TCAGATCCTACCAAGAGAAA+TGG | + | chr5.4:10606628-10606647 | MS.gene010368:CDS | 40.0% | |
TGAGGTTAATGGTTTCTTGG+TGG | - | chr5.4:10606608-10606627 | None:intergenic | 40.0% | |
TTGAGGTTTCTTTGTGGGAA+GGG | - | chr5.4:10606571-10606590 | None:intergenic | 40.0% | |
! | AGTTGAGAAGTTTTGCAGAG+AGG | + | chr5.4:10607120-10607139 | MS.gene010368:CDS | 40.0% |
! | AGTTTTGCAGAGAGGATTGT+AGG | + | chr5.4:10607128-10607147 | MS.gene010368:CDS | 40.0% |
! | ATGGGTTGAGGTTTCTTTGT+GGG | - | chr5.4:10606576-10606595 | None:intergenic | 40.0% |
! | CGTTGTTGTCTTGTTACTGT+TGG | - | chr5.4:10607029-10607048 | None:intergenic | 40.0% |
! | GTTTTGCAGAGAGGATTGTA+GGG | + | chr5.4:10607129-10607148 | MS.gene010368:CDS | 40.0% |
! | TGAAAAAGCATAGTGCTGCT+AGG | + | chr5.4:10606961-10606980 | MS.gene010368:CDS | 40.0% |
! | TGAAACTGATGATGAAGAGG+AGG | + | chr5.4:10607052-10607071 | MS.gene010368:CDS | 40.0% |
!! | AATGGGTTGAGGTTTCTTTG+TGG | - | chr5.4:10606577-10606596 | None:intergenic | 40.0% |
!! | GTCTTGTTACTGTTGGTTTC+TGG | - | chr5.4:10607022-10607041 | None:intergenic | 40.0% |
!!! | ATTGAAGAGCGGTTTTGGAA+GGG | - | chr5.4:10606743-10606762 | None:intergenic | 40.0% |
AGAAACCTCAACCCATTCCA+TGG | + | chr5.4:10606580-10606599 | MS.gene010368:CDS | 45.0% | |
CATGAGACGAAAATACTGCC+AGG | - | chr5.4:10606853-10606872 | None:intergenic | 45.0% | |
CTCATGGATGATCTTGAACG+CGG | + | chr5.4:10606867-10606886 | MS.gene010368:CDS | 45.0% | |
GTTGAGGTTTCTTTGTGGGA+AGG | - | chr5.4:10606572-10606591 | None:intergenic | 45.0% | |
TCTCTTGGTAGGATCTGATG+AGG | - | chr5.4:10606626-10606645 | None:intergenic | 45.0% | |
! | AACTGATGATGAAGAGGAGG+AGG | + | chr5.4:10607055-10607074 | MS.gene010368:CDS | 45.0% |
! | AAGAGTGAGTTCTGGTGAAG+CGG | - | chr5.4:10606547-10606566 | None:intergenic | 45.0% |
! | ACGACATTGAAGAGCGGTTT+TGG | - | chr5.4:10606748-10606767 | None:intergenic | 45.0% |
! | ATAGGGTGCTTCTGAGAAAG+AGG | - | chr5.4:10606915-10606934 | None:intergenic | 45.0% |
! | ATAGTGCTGCTAGGTCTGTT+AGG | + | chr5.4:10606970-10606989 | MS.gene010368:CDS | 45.0% |
! | CTGGCAGTATTTTCGTCTCA+TGG | + | chr5.4:10606851-10606870 | MS.gene010368:CDS | 45.0% |
!! | TGAGGCGGTGTTTTTCAGAT+CGG | - | chr5.4:10606800-10606819 | None:intergenic | 45.0% |
!!! | CATTGAAGAGCGGTTTTGGA+AGG | - | chr5.4:10606744-10606763 | None:intergenic | 45.0% |
CTGCCAGGATCGAGAAGAAA+CGG | - | chr5.4:10606838-10606857 | None:intergenic | 50.0% | |
CTGCTAGGTCTGTTAGGTCA+AGG | + | chr5.4:10606976-10606995 | MS.gene010368:CDS | 50.0% | |
GATGGCGAAGAGTTTGACAG+CGG | + | chr5.4:10607097-10607116 | MS.gene010368:CDS | 50.0% | |
GGAAGGGAAAGAGTGAGTTC+TGG | - | chr5.4:10606555-10606574 | None:intergenic | 50.0% | |
TGCAGAGAGGATTGTAGGGT+TGG | + | chr5.4:10607133-10607152 | MS.gene010368:CDS | 50.0% | |
! | ATGGTTTCTTGGTGGGTCCA+TGG | - | chr5.4:10606600-10606619 | None:intergenic | 50.0% |
! | CTTCTGAGAAAGAGGTCGGA+CGG | - | chr5.4:10606907-10606926 | None:intergenic | 50.0% |
! | GGTGCTTCTGAGAAAGAGGT+CGG | - | chr5.4:10606911-10606930 | None:intergenic | 50.0% |
! | TCTTGGTGGGTCCATGGAAT+GGG | - | chr5.4:10606594-10606613 | None:intergenic | 50.0% |
! | TTCTTGGTGGGTCCATGGAA+TGG | - | chr5.4:10606595-10606614 | None:intergenic | 50.0% |
! | TTTCAGATCGGTGGCGTTGA+CGG | - | chr5.4:10606788-10606807 | None:intergenic | 50.0% |
AGAAACGGCGGAGGAAGTAG+CGG | - | chr5.4:10606823-10606842 | None:intergenic | 55.0% | |
AGACGAAGAGGAGGGAGTGA+TGG | + | chr5.4:10607079-10607098 | MS.gene010368:CDS | 55.0% | |
AGAGGAGGAGGAAGACGAAG+AGG | + | chr5.4:10607067-10607086 | MS.gene010368:CDS | 55.0% | |
CCAGGATCGAGAAGAAACGG+CGG | - | chr5.4:10606835-10606854 | None:intergenic | 55.0% | |
CCTATCTCCGACGATAGCGA+CGG | + | chr5.4:10606930-10606949 | MS.gene010368:CDS | 55.0% | |
CGGCAGTCAATGGGAAGAAG+TGG | + | chr5.4:10606677-10606696 | MS.gene010368:CDS | 55.0% | |
CGTCGCTATCGTCGGAGATA+GGG | - | chr5.4:10606932-10606951 | None:intergenic | 55.0% | |
GAAAGAGGTCGGACGGAGAT+AGG | - | chr5.4:10606900-10606919 | None:intergenic | 55.0% | |
GAGGAGGAAGACGAAGAGGA+GGG | + | chr5.4:10607071-10607090 | MS.gene010368:CDS | 55.0% | |
GGTCGGACGGAGATAGGTAA+AGG | - | chr5.4:10606894-10606913 | None:intergenic | 55.0% | |
GTAATCGTAGCCGCAACGAG+CGG | - | chr5.4:10606715-10606734 | None:intergenic | 55.0% | |
! | AGTGAGTTCTGGTGAAGCGG+TGG | - | chr5.4:10606544-10606563 | None:intergenic | 55.0% |
! | CTTCTTCCCATTGACTGCCG+CGG | - | chr5.4:10606677-10606696 | None:intergenic | 55.0% |
!! | GGCGGTGTTTTTCAGATCGG+TGG | - | chr5.4:10606797-10606816 | None:intergenic | 55.0% |
!! | TGGGTCCATGGAATGGGTTG+AGG | - | chr5.4:10606588-10606607 | None:intergenic | 55.0% |
!!! | GAAGAGCGGTTTTGGAAGGG+TGG | - | chr5.4:10606740-10606759 | None:intergenic | 55.0% |
CCGCCGTTTCTTCTCGATCC+TGG | + | chr5.4:10606832-10606851 | MS.gene010368:CDS | 60.0% | |
CCGTCGCTATCGTCGGAGAT+AGG | - | chr5.4:10606933-10606952 | None:intergenic | 60.0% | |
CCTCTCACCGTCGCTATCGT+CGG | - | chr5.4:10606940-10606959 | None:intergenic | 60.0% | |
CGACGATAGCGACGGTGAGA+GGG | + | chr5.4:10606938-10606957 | MS.gene010368:CDS | 60.0% | |
GGAGGAGGAAGACGAAGAGG+AGG | + | chr5.4:10607070-10607089 | MS.gene010368:CDS | 60.0% | |
GGATCGAGAAGAAACGGCGG+AGG | - | chr5.4:10606832-10606851 | None:intergenic | 60.0% | |
GTAGTCGTAGCCGCTCGTTG+CGG | + | chr5.4:10606702-10606721 | MS.gene010368:CDS | 60.0% | |
CCCACTCCGCGGCAGTCAAT+GGG | + | chr5.4:10606668-10606687 | MS.gene010368:CDS | 65.0% | |
CCGACGATAGCGACGGTGAG+AGG | + | chr5.4:10606937-10606956 | MS.gene010368:CDS | 65.0% | |
CGGAGGAAGTAGCGGTGAGG+CGG | - | chr5.4:10606815-10606834 | None:intergenic | 65.0% | |
! | CCCATTGACTGCCGCGGAGT+GGG | - | chr5.4:10606671-10606690 | None:intergenic | 65.0% |
! | TCCCATTGACTGCCGCGGAG+TGG | - | chr5.4:10606672-10606691 | None:intergenic | 65.0% |
CGGCGGAGGAAGTAGCGGTG+AGG | - | chr5.4:10606818-10606837 | None:intergenic | 70.0% | |
CTCAAACGGGGCCCACTCCG+CGG | + | chr5.4:10606657-10606676 | MS.gene010368:CDS | 70.0% | |
GCCCACTCCGCGGCAGTCAA+TGG | + | chr5.4:10606667-10606686 | MS.gene010368:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 10606537 | 10607289 | 10606537 | ID=MS.gene010368 |
chr5.4 | mRNA | 10606537 | 10607289 | 10606537 | ID=MS.gene010368.t1;Parent=MS.gene010368 |
chr5.4 | exon | 10606537 | 10607289 | 10606537 | ID=MS.gene010368.t1.exon1;Parent=MS.gene010368.t1 |
chr5.4 | CDS | 10606537 | 10607289 | 10606537 | ID=cds.MS.gene010368.t1;Parent=MS.gene010368.t1 |
Gene Sequence |
Protein sequence |