Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01042.t1 | XP_003613728.2 | 87.5 | 351 | 37 | 3 | 1 | 349 | 1 | 346 | 7.90E-142 | 513.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01042.t1 | Q8RWD7 | 38.1 | 113 | 63 | 3 | 22 | 132 | 64 | 171 | 2.1e-13 | 78.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01042.t1 | G7KDV8 | 87.5 | 351 | 37 | 3 | 1 | 349 | 1 | 346 | 5.7e-142 | 513.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene01042.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01042.t1 | MTR_7g039520 | 88.319 | 351 | 34 | 3 | 1 | 349 | 1 | 346 | 0.0 | 626 |
| MS.gene01042.t1 | MTR_5g040080 | 88.604 | 351 | 33 | 3 | 1 | 349 | 1 | 346 | 0.0 | 616 |
| MS.gene01042.t1 | MTR_2g014410 | 85.375 | 253 | 17 | 2 | 96 | 347 | 42 | 275 | 1.83e-143 | 409 |
| MS.gene01042.t1 | MTR_1g069015 | 34.351 | 131 | 73 | 5 | 1 | 122 | 1 | 127 | 1.64e-15 | 77.8 |
| MS.gene01042.t1 | MTR_1g069020 | 36.134 | 119 | 62 | 4 | 22 | 134 | 28 | 138 | 3.94e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01042.t1 | AT1G58210 | 38.053 | 113 | 63 | 3 | 22 | 132 | 64 | 171 | 2.71e-17 | 81.3 |
Find 73 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACTTTATGTAAAGAAAT+TGG | 0.202989 | 2.4:+70476536 | MS.gene01042:CDS |
| CCTTGTGGTCACTTGATAAT+TGG | 0.239096 | 2.4:-70476566 | None:intergenic |
| GTGTGGTGGTGGAACGTATT+GGG | 0.250160 | 2.4:-70475346 | None:intergenic |
| GGTGGAACGTATTGGGGTTT+TGG | 0.271264 | 2.4:-70475339 | None:intergenic |
| TCCAATTTCTTTACATAAAG+TGG | 0.301497 | 2.4:-70476537 | None:intergenic |
| GTGATTTATAATGGTGAAAA+TGG | 0.304153 | 2.4:+70476213 | MS.gene01042:CDS |
| CAGTTGGATTTCCACACAAT+TGG | 0.315477 | 2.4:+70476019 | MS.gene01042:CDS |
| GTGATTTCTAATGGTGAAAA+TGG | 0.338731 | 2.4:+70476423 | MS.gene01042:CDS |
| GCCTCACATACATCTCAAAA+TGG | 0.350427 | 2.4:+70475760 | MS.gene01042:CDS |
| GTTGGAGAGGGGTGTGGTGG+TGG | 0.351038 | 2.4:-70475357 | None:intergenic |
| TGTGGTGGTGGAACGTATTG+GGG | 0.352785 | 2.4:-70475345 | None:intergenic |
| CAAGTTGGCGTGATTTATAA+TGG | 0.357302 | 2.4:+70476204 | MS.gene01042:CDS |
| TGCAAGGGTTTAGCTCTTGC+TGG | 0.372413 | 2.4:+70475535 | MS.gene01042:CDS |
| GGTGTGGTGGTGGAACGTAT+TGG | 0.373524 | 2.4:-70475347 | None:intergenic |
| AATTATTCAGCTCATAGTTC+AGG | 0.376079 | 2.4:+70476045 | MS.gene01042:CDS |
| GCTAAACCCTTGCATTGGTT+TGG | 0.379957 | 2.4:-70475526 | None:intergenic |
| AGCAGCTGATGAAACTTTGC+AGG | 0.381501 | 2.4:+70476278 | MS.gene01042:CDS |
| AAGTCACATGATGCTTATAA+AGG | 0.387819 | 2.4:+70476671 | MS.gene01042:CDS |
| TGAAACTTTGCAGGAAGATA+TGG | 0.392140 | 2.4:+70476287 | MS.gene01042:CDS |
| TCTTGCTGGCATTGCTTCAA+TGG | 0.402134 | 2.4:+70475549 | MS.gene01042:CDS |
| ATACCGGTAACTTGTGTAGT+AGG | 0.407561 | 2.4:+70476622 | MS.gene01042:CDS |
| ACAACAATATTGCGAGTCTA+AGG | 0.409478 | 2.4:+70476169 | MS.gene01042:CDS |
| CAGGTTGCCGTGATTTCTAA+TGG | 0.414513 | 2.4:+70476414 | MS.gene01042:CDS |
| GAACGCGTGGATAAAGTTAC+TGG | 0.426422 | 2.4:+70476078 | MS.gene01042:CDS |
| CACCCTACTACACAAGTTAC+CGG | 0.426920 | 2.4:-70476625 | None:intergenic |
| GGGTCTTAAGTTGTCTCAAC+AGG | 0.433791 | 2.4:+70476335 | MS.gene01042:CDS |
| CCCATGAGCCAGGCAGTGTT+AGG | 0.434002 | 2.4:+70476511 | MS.gene01042:CDS |
| TTTGAAGATTGAGTTGGAGA+GGG | 0.438182 | 2.4:-70475369 | None:intergenic |
| AAACCCTTGCATTGGTTTGG+AGG | 0.442882 | 2.4:-70475523 | None:intergenic |
| ATCTTGAGTCTCTACAACAT+TGG | 0.448912 | 2.4:-70475704 | None:intergenic |
| GCAATGTTGTCATTACCTTC+AGG | 0.449864 | 2.4:-70476312 | None:intergenic |
| GAAGGTAATGACAACATTGC+GGG | 0.450334 | 2.4:+70476315 | MS.gene01042:CDS |
| GTTGTCTCAACAGGAAGATA+TGG | 0.457391 | 2.4:+70476344 | MS.gene01042:CDS |
| CACATGATGCTTATAAAGGA+TGG | 0.459002 | 2.4:+70476675 | MS.gene01042:CDS |
| TTTAGATTTGAAGATTGAGT+TGG | 0.459049 | 2.4:-70475375 | None:intergenic |
| TCTTGAGTCTCTACAACATT+GGG | 0.460912 | 2.4:-70475703 | None:intergenic |
| CTTCTGTTAGAAGATCTACC+AGG | 0.478887 | 2.4:+70476721 | MS.gene01042:CDS |
| ACCTAACACTGCCTGGCTCA+TGG | 0.480484 | 2.4:-70476512 | None:intergenic |
| GCAATGTTGTCATTACCTTC+CGG | 0.481010 | 2.4:-70476369 | None:intergenic |
| TGAGTTGGAGAGGGGTGTGG+TGG | 0.489080 | 2.4:-70475360 | None:intergenic |
| ATTTGAAGATTGAGTTGGAG+AGG | 0.496033 | 2.4:-70475370 | None:intergenic |
| TTATGTCGCCGTTTCTCAGT+TGG | 0.496930 | 2.4:+70476003 | MS.gene01042:CDS |
| TGATACATTTCTTATCCTTG+TGG | 0.504839 | 2.4:-70476581 | None:intergenic |
| GATTGAGTTGGAGAGGGGTG+TGG | 0.509260 | 2.4:-70475363 | None:intergenic |
| TTGAAGATTGAGTTGGAGAG+GGG | 0.510736 | 2.4:-70475368 | None:intergenic |
| TCTTGATTTGTCTCAACCGC+AGG | 0.523290 | 2.4:+70476395 | MS.gene01042:CDS |
| CCTAACACTGCCTGGCTCAT+GGG | 0.526114 | 2.4:-70476511 | None:intergenic |
| CAAGAGCTAAACCCTTGCAT+TGG | 0.528805 | 2.4:-70475531 | None:intergenic |
| TCAACAGGAAGATATGGAAC+CGG | 0.540435 | 2.4:+70476350 | MS.gene01042:CDS |
| TTTGATCCTACCCATGAGCC+AGG | 0.541769 | 2.4:+70476501 | MS.gene01042:CDS |
| AAGAAGAATGTAGATGATAC+CGG | 0.549093 | 2.4:+70476606 | MS.gene01042:CDS |
| AGTGGAGACCTAACACTGCC+TGG | 0.549411 | 2.4:-70476519 | None:intergenic |
| GTGGAAATCCAACTGAGAAA+CGG | 0.556021 | 2.4:-70476011 | None:intergenic |
| ACATGATGCTTATAAAGGAT+GGG | 0.566978 | 2.4:+70476676 | MS.gene01042:CDS |
| GGCATCACTGTAATGTTCCA+CGG | 0.577101 | 2.4:+70475727 | MS.gene01042:CDS |
| TTATAAATCACGCCAACTTG+AGG | 0.591187 | 2.4:-70476201 | None:intergenic |
| TACCGGTAACTTGTGTAGTA+GGG | 0.605302 | 2.4:+70476623 | MS.gene01042:CDS |
| GAAACCTCCAAACCAATGCA+AGG | 0.605866 | 2.4:+70475519 | MS.gene01042:CDS |
| ACACTGCCTGGCTCATGGGT+AGG | 0.608929 | 2.4:-70476507 | None:intergenic |
| CCAATTATCAAGTGACCACA+AGG | 0.618748 | 2.4:+70476566 | MS.gene01042:CDS |
| CAGGAAGATATGGAACCTGA+AGG | 0.622434 | 2.4:+70476297 | MS.gene01042:CDS |
| AGGAAATGAATGTGAACGCG+TGG | 0.622967 | 2.4:+70476065 | MS.gene01042:CDS |
| AAACCTCCAAACCAATGCAA+GGG | 0.637222 | 2.4:+70475520 | MS.gene01042:CDS |
| AGGTTGTCTCAACCTCAAGT+TGG | 0.639538 | 2.4:+70476189 | MS.gene01042:CDS |
| GTTACCTTCAGCTTCCTGTG+AGG | 0.642766 | 2.4:-70476148 | None:intergenic |
| GAGACCTCACAGGAAGCTGA+AGG | 0.643008 | 2.4:+70476144 | MS.gene01042:CDS |
| AACAGCTGATGAGACCTCAC+AGG | 0.646895 | 2.4:+70476134 | MS.gene01042:CDS |
| AATGTTGTAGAGACTCAAGA+TGG | 0.656225 | 2.4:+70475706 | MS.gene01042:CDS |
| CAGGAAGATATGGAACCGGA+AGG | 0.662654 | 2.4:+70476354 | MS.gene01042:CDS |
| TTCTGTTAGAAGATCTACCA+GGG | 0.673391 | 2.4:+70476722 | MS.gene01042:CDS |
| TTAGAAATCACGGCAACCTG+CGG | 0.679371 | 2.4:-70476411 | None:intergenic |
| TGAAGGTAATGACAACATTG+CGG | 0.680073 | 2.4:+70476314 | MS.gene01042:CDS |
| GTGAGGCGTTAATCAAACCG+TGG | 0.715788 | 2.4:-70475744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTAATTGGTTATTTGTTT+GGG | + | chr2.4:70475602-70475621 | MS.gene01042:intron | 20.0% |
| !! | TTGAATATAATTAGTGTGTT+TGG | + | chr2.4:70475878-70475897 | MS.gene01042:intron | 20.0% |
| !! | TTTCTAATTGGTTATTTGTT+TGG | + | chr2.4:70475601-70475620 | MS.gene01042:intron | 20.0% |
| !!! | TTTTTTATAATTTAGTACCC+TGG | - | chr2.4:70476742-70476761 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTTTCACTTTGT+AGG | + | chr2.4:70475578-70475597 | MS.gene01042:intron | 20.0% |
| ! | AAGAGAAATGAGAAAGAAAA+AGG | - | chr2.4:70475808-70475827 | None:intergenic | 25.0% |
| ! | AGAGAAATGAGAAAGAAAAA+GGG | - | chr2.4:70475807-70475826 | None:intergenic | 25.0% |
| ! | GTGATTTATAATGGTGAAAA+TGG | + | chr2.4:70476213-70476232 | MS.gene01042:CDS | 25.0% |
| ! | TCCAATTTCTTTACATAAAG+TGG | - | chr2.4:70476540-70476559 | None:intergenic | 25.0% |
| ! | TCCACTTTATGTAAAGAAAT+TGG | + | chr2.4:70476536-70476555 | MS.gene01042:CDS | 25.0% |
| ! | TTTAGATTTGAAGATTGAGT+TGG | - | chr2.4:70475378-70475397 | None:intergenic | 25.0% |
| !! | ATTTTCACCATTAGAAATCA+CGG | - | chr2.4:70476424-70476443 | None:intergenic | 25.0% |
| !! | GAATAATTTTTCCAATTGTG+TGG | - | chr2.4:70476033-70476052 | None:intergenic | 25.0% |
| AAGAAGAATGTAGATGATAC+CGG | + | chr2.4:70476606-70476625 | MS.gene01042:CDS | 30.0% | |
| AAGTCACATGATGCTTATAA+AGG | + | chr2.4:70476671-70476690 | MS.gene01042:CDS | 30.0% | |
| AATTATTCAGCTCATAGTTC+AGG | + | chr2.4:70476045-70476064 | MS.gene01042:CDS | 30.0% | |
| ACATGATGCTTATAAAGGAT+GGG | + | chr2.4:70476676-70476695 | MS.gene01042:CDS | 30.0% | |
| ATCTGCAAAAATAAGCAAGT+AGG | - | chr2.4:70475475-70475494 | None:intergenic | 30.0% | |
| GTGATTTCTAATGGTGAAAA+TGG | + | chr2.4:70476423-70476442 | MS.gene01042:CDS | 30.0% | |
| TCACTTTGTAGGTTTCTAAT+TGG | + | chr2.4:70475589-70475608 | MS.gene01042:intron | 30.0% | |
| TGATACATTTCTTATCCTTG+TGG | - | chr2.4:70476584-70476603 | None:intergenic | 30.0% | |
| ! | AGATTTTCTTACATGAATGG+TGG | + | chr2.4:70475491-70475510 | MS.gene01042:intron | 30.0% |
| ! | TCAAAATGGTTTTTCTTCTG+AGG | + | chr2.4:70475774-70475793 | MS.gene01042:CDS | 30.0% |
| ! | TGCAGATTTTCTTACATGAA+TGG | + | chr2.4:70475488-70475507 | MS.gene01042:intron | 30.0% |
| AAACAAGAGAGAAGAGTGAA+TGG | - | chr2.4:70475411-70475430 | None:intergenic | 35.0% | |
| AACAAGAGAGAAGAGTGAAT+GGG | - | chr2.4:70475410-70475429 | None:intergenic | 35.0% | |
| AATGTTGTAGAGACTCAAGA+TGG | + | chr2.4:70475706-70475725 | MS.gene01042:CDS | 35.0% | |
| ACAACAATATTGCGAGTCTA+AGG | + | chr2.4:70476169-70476188 | MS.gene01042:CDS | 35.0% | |
| ATCTTGAGTCTCTACAACAT+TGG | - | chr2.4:70475707-70475726 | None:intergenic | 35.0% | |
| CACATGATGCTTATAAAGGA+TGG | + | chr2.4:70476675-70476694 | MS.gene01042:CDS | 35.0% | |
| TCTTGAGTCTCTACAACATT+GGG | - | chr2.4:70475706-70475725 | None:intergenic | 35.0% | |
| TGAAACTTTGCAGGAAGATA+TGG | + | chr2.4:70476287-70476306 | MS.gene01042:CDS | 35.0% | |
| TGAAGGTAATGACAACATTG+CGG | + | chr2.4:70476314-70476333 | MS.gene01042:CDS | 35.0% | |
| TTATAAATCACGCCAACTTG+AGG | - | chr2.4:70476204-70476223 | None:intergenic | 35.0% | |
| TTCTGTTAGAAGATCTACCA+GGG | + | chr2.4:70476722-70476741 | MS.gene01042:CDS | 35.0% | |
| ! | AAGCATCATGTGACTTTTCT+TGG | - | chr2.4:70476667-70476686 | None:intergenic | 35.0% |
| ! | CAAGTTGGCGTGATTTATAA+TGG | + | chr2.4:70476204-70476223 | MS.gene01042:CDS | 35.0% |
| !! | AAATGGTTTTTCTTCTGAGG+TGG | + | chr2.4:70475777-70475796 | MS.gene01042:intron | 35.0% |
| !! | ATTTGAAGATTGAGTTGGAG+AGG | - | chr2.4:70475373-70475392 | None:intergenic | 35.0% |
| !! | TTTGAAGATTGAGTTGGAGA+GGG | - | chr2.4:70475372-70475391 | None:intergenic | 35.0% |
| !!! | AATGGTTTTTCTTCTGAGGT+GGG | + | chr2.4:70475778-70475797 | MS.gene01042:intron | 35.0% |
| !!! | ACCATTTTGAGATGTATGTG+AGG | - | chr2.4:70475764-70475783 | None:intergenic | 35.0% |
| !!! | CTCATCAGCTGTTTTTTTGT+GGG | - | chr2.4:70476127-70476146 | None:intergenic | 35.0% |
| !!! | TCTCATCAGCTGTTTTTTTG+TGG | - | chr2.4:70476128-70476147 | None:intergenic | 35.0% |
| !!! | TTCATCAGCTGCTTTTTTGT+GGG | - | chr2.4:70476271-70476290 | None:intergenic | 35.0% |
| !!! | TTTCATCAGCTGCTTTTTTG+TGG | - | chr2.4:70476272-70476291 | None:intergenic | 35.0% |
| AAACCTCCAAACCAATGCAA+GGG | + | chr2.4:70475520-70475539 | MS.gene01042:CDS | 40.0% | |
| CAGTTGGATTTCCACACAAT+TGG | + | chr2.4:70476019-70476038 | MS.gene01042:CDS | 40.0% | |
| CCAATTATCAAGTGACCACA+AGG | + | chr2.4:70476566-70476585 | MS.gene01042:CDS | 40.0% | |
| CTTCTGTTAGAAGATCTACC+AGG | + | chr2.4:70476721-70476740 | MS.gene01042:CDS | 40.0% | |
| GAAGGTAATGACAACATTGC+GGG | + | chr2.4:70476315-70476334 | MS.gene01042:CDS | 40.0% | |
| GCAATGTTGTCATTACCTTC+AGG | - | chr2.4:70476315-70476334 | None:intergenic | 40.0% | |
| GCAATGTTGTCATTACCTTC+CGG | - | chr2.4:70476315-70476334 | None:intergenic | 40.0% | |
| GCCTCACATACATCTCAAAA+TGG | + | chr2.4:70475760-70475779 | MS.gene01042:CDS | 40.0% | |
| GTGGAAATCCAACTGAGAAA+CGG | - | chr2.4:70476014-70476033 | None:intergenic | 40.0% | |
| GTTGTCTCAACAGGAAGATA+TGG | + | chr2.4:70476344-70476363 | MS.gene01042:CDS | 40.0% | |
| TCAACAGGAAGATATGGAAC+CGG | + | chr2.4:70476350-70476369 | MS.gene01042:CDS | 40.0% | |
| TGAGAGTCATGTGGCAAAAA+TGG | + | chr2.4:70475907-70475926 | MS.gene01042:intron | 40.0% | |
| TTGTGACTATTGATGCATGC+AGG | + | chr2.4:70475635-70475654 | MS.gene01042:intron | 40.0% | |
| ! | ATACCGGTAACTTGTGTAGT+AGG | + | chr2.4:70476622-70476641 | MS.gene01042:CDS | 40.0% |
| ! | CCTTGTGGTCACTTGATAAT+TGG | - | chr2.4:70476569-70476588 | None:intergenic | 40.0% |
| ! | TACCGGTAACTTGTGTAGTA+GGG | + | chr2.4:70476623-70476642 | MS.gene01042:CDS | 40.0% |
| !! | TTGAAGATTGAGTTGGAGAG+GGG | - | chr2.4:70475371-70475390 | None:intergenic | 40.0% |
| AGCAGCTGATGAAACTTTGC+AGG | + | chr2.4:70476278-70476297 | MS.gene01042:CDS | 45.0% | |
| AGGAAATGAATGTGAACGCG+TGG | + | chr2.4:70476065-70476084 | MS.gene01042:CDS | 45.0% | |
| AGGTTGTCTCAACCTCAAGT+TGG | + | chr2.4:70476189-70476208 | MS.gene01042:CDS | 45.0% | |
| AGTACAATCAAACGAGCCCA+GGG | - | chr2.4:70475838-70475857 | None:intergenic | 45.0% | |
| ATTTCTCTTGACCCATCCCT+GGG | + | chr2.4:70475819-70475838 | MS.gene01042:intron | 45.0% | |
| CAAGAGCTAAACCCTTGCAT+TGG | - | chr2.4:70475534-70475553 | None:intergenic | 45.0% | |
| CACCCTACTACACAAGTTAC+CGG | - | chr2.4:70476628-70476647 | None:intergenic | 45.0% | |
| CAGGAAGATATGGAACCTGA+AGG | + | chr2.4:70476297-70476316 | MS.gene01042:CDS | 45.0% | |
| CAGGTTGCCGTGATTTCTAA+TGG | + | chr2.4:70476414-70476433 | MS.gene01042:CDS | 45.0% | |
| GAAACCTCCAAACCAATGCA+AGG | + | chr2.4:70475519-70475538 | MS.gene01042:CDS | 45.0% | |
| GAACGCGTGGATAAAGTTAC+TGG | + | chr2.4:70476078-70476097 | MS.gene01042:CDS | 45.0% | |
| GGCATCACTGTAATGTTCCA+CGG | + | chr2.4:70475727-70475746 | MS.gene01042:CDS | 45.0% | |
| TAGTACAATCAAACGAGCCC+AGG | - | chr2.4:70475839-70475858 | None:intergenic | 45.0% | |
| TCTTGCTGGCATTGCTTCAA+TGG | + | chr2.4:70475549-70475568 | MS.gene01042:CDS | 45.0% | |
| TGGTTATGCTGAGAGTCATG+TGG | + | chr2.4:70475898-70475917 | MS.gene01042:intron | 45.0% | |
| TTAGAAATCACGGCAACCTG+CGG | - | chr2.4:70476414-70476433 | None:intergenic | 45.0% | |
| TTATGTCGCCGTTTCTCAGT+TGG | + | chr2.4:70476003-70476022 | MS.gene01042:CDS | 45.0% | |
| ! | GGGTCTTAAGTTGTCTCAAC+AGG | + | chr2.4:70476335-70476354 | MS.gene01042:CDS | 45.0% |
| !! | AAACCCTTGCATTGGTTTGG+AGG | - | chr2.4:70475526-70475545 | None:intergenic | 45.0% |
| !! | GCTAAACCCTTGCATTGGTT+TGG | - | chr2.4:70475529-70475548 | None:intergenic | 45.0% |
| !! | TCTTGATTTGTCTCAACCGC+AGG | + | chr2.4:70476395-70476414 | MS.gene01042:CDS | 45.0% |
| AACAGCTGATGAGACCTCAC+AGG | + | chr2.4:70476134-70476153 | MS.gene01042:CDS | 50.0% | |
| AATCAAACGAGCCCAGGGAT+GGG | - | chr2.4:70475833-70475852 | None:intergenic | 50.0% | |
| CAGGAAGATATGGAACCGGA+AGG | + | chr2.4:70476354-70476373 | MS.gene01042:CDS | 50.0% | |
| CATTTCTCTTGACCCATCCC+TGG | + | chr2.4:70475818-70475837 | MS.gene01042:intron | 50.0% | |
| GTTACCTTCAGCTTCCTGTG+AGG | - | chr2.4:70476151-70476170 | None:intergenic | 50.0% | |
| TTTGATCCTACCCATGAGCC+AGG | + | chr2.4:70476501-70476520 | MS.gene01042:CDS | 50.0% | |
| ! | GGTGGAACGTATTGGGGTTT+TGG | - | chr2.4:70475342-70475361 | None:intergenic | 50.0% |
| ! | GTGAGGCGTTAATCAAACCG+TGG | - | chr2.4:70475747-70475766 | None:intergenic | 50.0% |
| !! | GTGTGGTGGTGGAACGTATT+GGG | - | chr2.4:70475349-70475368 | None:intergenic | 50.0% |
| !! | TGCAAGGGTTTAGCTCTTGC+TGG | + | chr2.4:70475535-70475554 | MS.gene01042:CDS | 50.0% |
| !! | TGTGGTGGTGGAACGTATTG+GGG | - | chr2.4:70475348-70475367 | None:intergenic | 50.0% |
| ACCTAACACTGCCTGGCTCA+TGG | - | chr2.4:70476515-70476534 | None:intergenic | 55.0% | |
| AGTGGAGACCTAACACTGCC+TGG | - | chr2.4:70476522-70476541 | None:intergenic | 55.0% | |
| CAATCAAACGAGCCCAGGGA+TGG | - | chr2.4:70475834-70475853 | None:intergenic | 55.0% | |
| CCTAACACTGCCTGGCTCAT+GGG | - | chr2.4:70476514-70476533 | None:intergenic | 55.0% | |
| GAGACCTCACAGGAAGCTGA+AGG | + | chr2.4:70476144-70476163 | MS.gene01042:CDS | 55.0% | |
| !! | GATTGAGTTGGAGAGGGGTG+TGG | - | chr2.4:70475366-70475385 | None:intergenic | 55.0% |
| !! | GGTGTGGTGGTGGAACGTAT+TGG | - | chr2.4:70475350-70475369 | None:intergenic | 55.0% |
| ACACTGCCTGGCTCATGGGT+AGG | - | chr2.4:70476510-70476529 | None:intergenic | 60.0% | |
| CCCATGAGCCAGGCAGTGTT+AGG | + | chr2.4:70476511-70476530 | MS.gene01042:CDS | 60.0% | |
| ! | TGAGTTGGAGAGGGGTGTGG+TGG | - | chr2.4:70475363-70475382 | None:intergenic | 60.0% |
| ! | GTTGGAGAGGGGTGTGGTGG+TGG | - | chr2.4:70475360-70475379 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 70475332 | 70476764 | 70475332 | ID=MS.gene01042 |
| chr2.4 | mRNA | 70475332 | 70476764 | 70475332 | ID=MS.gene01042.t1;Parent=MS.gene01042 |
| chr2.4 | exon | 70475332 | 70475400 | 70475332 | ID=MS.gene01042.t1.exon1;Parent=MS.gene01042.t1 |
| chr2.4 | CDS | 70475332 | 70475400 | 70475332 | ID=cds.MS.gene01042.t1;Parent=MS.gene01042.t1 |
| chr2.4 | exon | 70475493 | 70475572 | 70475493 | ID=MS.gene01042.t1.exon2;Parent=MS.gene01042.t1 |
| chr2.4 | CDS | 70475493 | 70475572 | 70475493 | ID=cds.MS.gene01042.t1;Parent=MS.gene01042.t1 |
| chr2.4 | exon | 70475657 | 70475795 | 70475657 | ID=MS.gene01042.t1.exon3;Parent=MS.gene01042.t1 |
| chr2.4 | CDS | 70475657 | 70475795 | 70475657 | ID=cds.MS.gene01042.t1;Parent=MS.gene01042.t1 |
| chr2.4 | exon | 70476003 | 70476764 | 70476003 | ID=MS.gene01042.t1.exon4;Parent=MS.gene01042.t1 |
| chr2.4 | CDS | 70476003 | 70476764 | 70476003 | ID=cds.MS.gene01042.t1;Parent=MS.gene01042.t1 |
| Gene Sequence |
| Protein sequence |
