AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene010438

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010438.t1 MTR_5g018910 78.642 604 64 4 1 560 1 583 0.0 951
MS.gene010438.t1 MTR_5g018060 75.681 477 103 4 1 471 1 470 0.0 722
MS.gene010438.t1 MTR_5g018900 89.785 372 37 1 471 842 155 525 0.0 687
MS.gene010438.t1 MTR_5g018210 70.650 477 134 1 1 471 1 477 0.0 672
MS.gene010438.t1 MTR_8g078410 78.667 375 77 2 470 841 157 531 0.0 598
MS.gene010438.t1 MTR_5g018120 65.328 473 147 4 1 471 1 458 0.0 590
MS.gene010438.t1 MTR_1g021835 67.385 371 111 3 471 841 108 468 1.11e-176 517
MS.gene010438.t1 MTR_5g081160 62.162 370 133 2 472 841 141 503 7.20e-162 481
MS.gene010438.t1 MTR_3g069410 60.108 371 146 2 472 841 143 512 4.67e-151 453
MS.gene010438.t1 MTR_5g018160 64.035 342 107 5 133 471 12 340 4.68e-137 413
MS.gene010438.t1 MTR_1g021835 69.466 262 76 2 471 732 108 365 4.29e-132 401
MS.gene010438.t1 MTR_5g018070 67.416 267 87 0 205 471 126 392 6.81e-115 367
MS.gene010438.t1 MTR_5g018070 55.556 135 52 4 1 133 1 129 2.43e-31 132
MS.gene010438.t1 MTR_8g079350 53.550 338 152 5 149 482 94 430 1.90e-102 324
MS.gene010438.t1 MTR_1g021835 66.986 209 66 1 471 679 108 313 1.11e-101 318
MS.gene010438.t1 MTR_5g018190 59.797 296 96 6 1 288 1 281 2.41e-100 318
MS.gene010438.t1 MTR_8g479450 40.541 481 258 14 5 463 1 475 9.42e-100 329
MS.gene010438.t1 MTR_8g079520 41.509 477 254 10 1 466 1 463 1.81e-97 322
MS.gene010438.t1 MTR_8g479430 41.895 475 260 11 8 471 7 476 5.70e-96 318
MS.gene010438.t1 MTR_8g079360 44.201 457 231 7 14 467 16 451 2.21e-95 317
MS.gene010438.t1 MTR_0391s0020 43.867 481 244 11 1 471 1 465 2.07e-93 311
MS.gene010438.t1 MTR_8g079280 52.381 336 154 5 140 471 69 402 7.32e-93 308
MS.gene010438.t1 MTR_8g079400 46.279 430 182 10 42 467 43 427 3.07e-92 308
MS.gene010438.t1 MTR_8g079400 46.279 430 182 10 42 467 53 437 4.89e-92 307
MS.gene010438.t1 MTR_8g079450 43.384 461 228 10 16 467 17 453 2.27e-90 303
MS.gene010438.t1 MTR_8g079550 39.958 473 254 9 1 462 1 454 5.45e-89 299
MS.gene010438.t1 MTR_5g018110 52.027 296 126 2 1 293 1 283 2.81e-77 259
MS.gene010438.t1 MTR_1g021100 27.879 495 293 15 11 463 9 481 4.05e-42 166
MS.gene010438.t1 MTR_1g021110 28.637 433 257 13 62 459 59 474 5.85e-35 143
MS.gene010438.t1 MTR_1g078190 28.875 329 202 13 157 458 167 490 3.28e-18 90.5
MS.gene010438.t1 MTR_5g018170 62.687 67 18 1 1 67 1 60 5.45e-18 79.0
MS.gene010438.t1 MTR_3g464870 31.447 318 189 13 126 423 107 415 3.92e-17 87.0
MS.gene010438.t1 MTR_3g464870 31.447 318 189 13 126 423 107 415 4.62e-17 87.0
MS.gene010438.t1 MTR_3g464920 31.132 318 190 13 126 423 107 415 4.65e-17 87.0
MS.gene010438.t1 MTR_5g085400 26.837 313 184 8 170 456 161 454 7.26e-17 86.3
MS.gene010438.t1 MTR_1g028720 25.153 326 213 8 122 428 33 346 9.02e-17 85.5
MS.gene010438.t1 MTR_5g027870 27.469 324 201 14 162 458 163 479 2.03e-16 84.7
MS.gene010438.t1 MTR_5g027910 27.859 341 210 14 146 458 148 480 3.67e-16 84.0
MS.gene010438.t1 MTR_3g053180 29.323 266 169 10 169 422 161 419 4.38e-16 83.6
MS.gene010438.t1 MTR_3g053180 29.323 266 169 10 169 422 161 419 4.55e-16 83.6
MS.gene010438.t1 MTR_1g031830 30.970 268 155 9 173 423 204 458 4.77e-16 83.6
MS.gene010438.t1 MTR_3g056635 28.869 336 201 14 157 462 172 499 4.96e-16 82.8
MS.gene010438.t1 MTR_3g466620 31.439 264 160 9 175 423 162 419 1.06e-15 82.0
MS.gene010438.t1 MTR_5g021080 30.233 301 172 11 182 458 191 477 1.36e-15 82.0
MS.gene010438.t1 MTR_3g048607 28.283 297 186 11 169 446 141 429 8.89e-15 79.3
MS.gene010438.t1 MTR_3g048690 30.078 256 152 10 182 421 107 351 1.38e-14 79.0
MS.gene010438.t1 MTR_3g056590 28.739 341 201 17 157 462 172 505 5.87e-14 76.6
MS.gene010438.t1 MTR_3g056310 27.405 343 190 16 158 461 175 497 8.15e-14 76.3
MS.gene010438.t1 MTR_3g055870 29.204 339 196 17 157 462 164 491 1.43e-13 75.5
MS.gene010438.t1 MTR_3g455900 27.811 338 202 15 157 462 49 376 1.53e-13 75.1
MS.gene010438.t1 MTR_2g072020 27.099 262 167 11 131 377 118 370 1.62e-13 75.5
MS.gene010438.t1 MTR_8g079380 42.453 106 58 3 364 467 110 214 1.96e-13 74.3
MS.gene010438.t1 MTR_3g055930 27.793 367 203 21 158 487 183 524 2.62e-13 74.3
MS.gene010438.t1 MTR_8g464870 25.373 268 166 9 175 423 166 418 2.76e-13 74.7
MS.gene010438.t1 MTR_3g053200 24.906 265 184 7 169 423 161 420 3.36e-13 74.3
MS.gene010438.t1 MTR_3g056190 28.720 289 169 14 158 421 180 456 3.42e-13 73.9
MS.gene010438.t1 MTR_7g026250 30.657 274 163 11 175 432 136 398 3.85e-13 73.9
MS.gene010438.t1 MTR_5g027860 29.129 333 192 17 157 459 157 475 5.02e-13 73.6
MS.gene010438.t1 MTR_5g027810 29.641 334 193 17 157 459 158 480 5.43e-13 73.6
MS.gene010438.t1 MTR_3g466580 23.881 469 283 18 126 532 107 563 9.78e-13 72.8
MS.gene010438.t1 MTR_8g011170 23.690 439 268 19 8 421 26 422 1.12e-12 72.4
MS.gene010438.t1 MTR_4g091380 22.676 441 298 12 12 428 5 426 1.33e-12 72.0
MS.gene010438.t1 MTR_3g013790 23.864 352 222 15 55 376 25 360 1.65e-12 72.0
MS.gene010438.t1 MTR_3g013790 23.864 352 222 15 55 376 25 360 1.67e-12 72.0
MS.gene010438.t1 MTR_3g062220 31.343 268 151 13 175 423 161 414 1.77e-12 71.6
MS.gene010438.t1 MTR_3g014510 29.697 330 180 13 130 421 124 439 2.67e-12 71.2
MS.gene010438.t1 MTR_3g014360 29.771 262 137 10 130 361 124 368 2.68e-12 71.2
MS.gene010438.t1 MTR_2g072080 25.573 262 171 9 131 377 118 370 2.83e-12 71.2
MS.gene010438.t1 MTR_8g020360 24.232 293 187 9 137 415 207 478 2.90e-12 71.2
MS.gene010438.t1 MTR_3g012060 27.740 292 170 13 157 421 171 448 4.20e-12 70.5
MS.gene010438.t1 MTR_3g055830 27.381 336 206 16 157 462 167 494 5.31e-12 70.1
MS.gene010438.t1 MTR_3g012270 27.190 331 203 17 156 458 179 499 5.82e-12 70.1
MS.gene010438.t1 MTR_1g047800 28.464 267 146 13 178 418 182 429 8.34e-12 69.7
MS.gene010438.t1 MTR_1g006975 25.091 275 179 12 164 423 165 427 8.35e-12 70.1
MS.gene010438.t1 MTR_0912s0010 30.159 252 155 11 185 423 170 413 9.19e-12 68.6
MS.gene010438.t1 MTR_3g014320 28.136 295 162 10 130 389 124 403 9.70e-12 69.7
MS.gene010438.t1 MTR_0133s0030 26.205 332 191 12 122 418 108 420 1.16e-11 69.3
MS.gene010438.t1 MTR_4g055630 27.907 301 173 13 150 421 143 428 1.20e-11 69.3
MS.gene010438.t1 MTR_3g062010 29.259 270 164 10 169 423 155 412 1.23e-11 69.3
MS.gene010438.t1 MTR_3g027420 30.213 235 140 10 157 374 153 380 1.32e-11 68.9
MS.gene010438.t1 MTR_8g038590 23.641 368 224 13 50 389 70 408 1.55e-11 68.9
MS.gene010438.t1 MTR_3g055720 29.204 339 196 18 157 462 170 497 1.63e-11 68.6
MS.gene010438.t1 MTR_3g056360 27.358 318 173 16 181 461 174 470 1.92e-11 68.6
MS.gene010438.t1 MTR_3g056410 27.358 318 173 16 181 461 165 461 1.95e-11 68.6
MS.gene010438.t1 MTR_3g055230 23.774 265 187 7 169 423 160 419 2.15e-11 68.2
MS.gene010438.t1 MTR_8g036195 29.921 254 157 9 177 418 177 421 2.78e-11 68.2
MS.gene010438.t1 MTR_3g055230 23.774 265 187 7 169 423 160 419 2.82e-11 68.2
MS.gene010438.t1 MTR_6g471150 23.438 320 220 7 126 428 34 345 2.96e-11 67.8
MS.gene010438.t1 MTR_3g055230 23.774 265 187 7 169 423 160 419 3.28e-11 67.8
MS.gene010438.t1 MTR_3g063010 28.352 261 166 10 175 423 161 412 3.32e-11 67.8
MS.gene010438.t1 MTR_3g467640 27.341 267 164 12 175 423 6 260 3.87e-11 67.4
MS.gene010438.t1 MTR_3g055230 23.774 265 187 7 169 423 160 419 4.21e-11 67.4
MS.gene010438.t1 MTR_4g091450 23.466 277 199 5 162 428 44 317 4.35e-11 67.4
MS.gene010438.t1 MTR_7g071940 28.571 301 171 14 150 421 138 423 4.36e-11 67.4
MS.gene010438.t1 MTR_3g022790 30.364 247 136 11 145 374 160 387 6.05e-11 67.0
MS.gene010438.t1 MTR_0043s0110 28.664 307 186 13 170 451 150 448 6.69e-11 66.6
MS.gene010438.t1 MTR_3g451650 25.234 428 241 17 170 529 150 566 8.42e-11 66.2
MS.gene010438.t1 MTR_3g069210 27.414 321 183 17 177 462 183 488 9.27e-11 66.2
MS.gene010438.t1 MTR_5g092190 26.692 266 172 7 169 423 155 408 9.50e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010438.t1 AT4G36860 76.819 371 82 1 471 841 187 553 0.0 595
MS.gene010438.t1 AT4G36860 76.819 371 82 1 471 841 211 577 0.0 595
MS.gene010438.t1 AT1G19270 64.420 371 124 2 471 841 169 531 2.62e-175 516
MS.gene010438.t1 AT1G19270 64.420 371 124 2 471 841 169 531 2.62e-175 516
MS.gene010438.t1 AT2G39830 61.351 370 141 2 472 841 151 518 1.10e-159 476
MS.gene010438.t1 AT2G39830 61.351 370 141 2 472 841 160 527 1.91e-159 475
MS.gene010438.t1 AT2G39830 60.858 373 141 3 472 841 160 530 3.59e-157 470
MS.gene010438.t1 AT4G36860 78.626 262 56 0 471 732 187 448 9.92e-154 458
MS.gene010438.t1 AT2G39830 63.218 261 95 1 472 732 160 419 3.11e-119 368
MS.gene010438.t1 AT5G66620 52.473 364 157 6 473 831 285 637 4.44e-119 375
MS.gene010438.t1 AT5G66620 52.044 367 160 6 473 834 276 631 1.31e-118 373
MS.gene010438.t1 AT5G66620 52.044 367 160 6 473 834 276 631 1.31e-118 373
MS.gene010438.t1 AT5G66610 50.693 361 167 5 471 831 71 420 2.06e-112 350
MS.gene010438.t1 AT5G66610 43.432 472 230 10 370 831 103 547 5.69e-112 353
MS.gene010438.t1 AT5G66610 41.082 499 230 11 370 831 103 574 1.30e-106 340
MS.gene010438.t1 AT5G66630 47.411 367 174 8 473 834 346 698 5.18e-102 332
MS.gene010438.t1 AT5G66630 34.700 317 200 5 1 312 6 320 1.01e-48 184
MS.gene010438.t1 AT5G66640 46.286 350 176 6 491 831 89 435 1.01e-94 305
MS.gene010438.t1 AT5G66640 46.286 350 176 6 491 831 89 435 1.01e-94 305
MS.gene010438.t1 AT5G66640 46.286 350 176 6 491 831 121 467 5.54e-94 303
MS.gene010438.t1 AT5G66640 46.286 350 176 6 491 831 120 466 5.98e-94 303
MS.gene010438.t1 AT5G17890 49.711 346 167 4 474 816 1240 1581 1.13e-93 323
MS.gene010438.t1 AT5G66640 48.125 320 156 5 521 831 10 328 4.04e-92 294
MS.gene010438.t1 AT5G66640 41.714 350 188 7 491 831 120 462 4.88e-78 261
MS.gene010438.t1 AT5G66640 41.714 350 188 7 491 831 121 463 5.17e-78 261
MS.gene010438.t1 AT5G66620 48.472 229 105 4 473 698 276 494 2.37e-67 233
MS.gene010438.t1 AT5G66900 33.120 468 294 12 5 461 55 514 9.76e-61 217
MS.gene010438.t1 AT5G66900 33.120 468 294 12 5 461 7 466 3.09e-59 216
MS.gene010438.t1 AT5G66900 33.120 468 294 12 5 461 55 514 3.25e-59 217
MS.gene010438.t1 AT5G66910 31.635 471 295 10 7 461 12 471 1.43e-52 197
MS.gene010438.t1 AT5G04720 27.160 486 304 15 1 459 1 463 1.75e-33 139
MS.gene010438.t1 AT4G33300 26.722 479 302 13 10 458 8 467 6.00e-31 130
MS.gene010438.t1 AT4G33300 26.722 479 302 13 10 458 8 467 6.00e-31 130
MS.gene010438.t1 AT5G47280 30.208 288 180 9 176 459 5 275 5.53e-28 120
MS.gene010438.t1 AT1G33560 26.521 411 237 15 73 460 73 441 6.24e-28 121
MS.gene010438.t1 AT1G12280 29.268 287 181 8 156 428 152 430 3.71e-19 93.6
MS.gene010438.t1 AT1G12220 28.622 283 189 9 156 428 31 310 4.37e-18 89.7
MS.gene010438.t1 AT1G12220 28.622 283 189 9 156 428 152 431 5.97e-18 89.7
MS.gene010438.t1 AT1G12220 28.622 283 189 9 156 428 152 431 5.97e-18 89.7
MS.gene010438.t1 AT1G59620 27.891 294 192 11 145 421 11 301 6.11e-18 89.4
MS.gene010438.t1 AT1G12210 28.214 280 179 8 156 421 152 423 4.80e-16 83.6
MS.gene010438.t1 AT1G12210 28.214 280 179 8 156 421 110 381 5.23e-16 83.2
MS.gene010438.t1 AT1G12210 28.214 280 179 8 156 421 110 381 5.23e-16 83.2
MS.gene010438.t1 AT1G63350 29.787 282 169 13 158 421 150 420 6.38e-16 83.2
MS.gene010438.t1 AT1G63350 29.787 282 169 13 158 421 150 420 7.24e-16 82.8
MS.gene010438.t1 AT1G63350 29.787 282 169 13 158 421 150 420 7.43e-16 82.8
MS.gene010438.t1 AT1G63350 29.787 282 169 13 158 421 150 420 7.43e-16 82.8
MS.gene010438.t1 AT1G61310 28.521 284 187 11 156 428 151 429 2.26e-15 81.3
MS.gene010438.t1 AT4G10780 26.855 283 194 9 156 428 149 428 4.39e-15 80.1
MS.gene010438.t1 AT1G61190 26.990 289 185 11 156 428 150 428 4.87e-15 80.1
MS.gene010438.t1 AT4G10780 26.855 283 194 9 156 428 149 428 5.16e-15 80.1
MS.gene010438.t1 AT1G61190 26.990 289 185 11 156 428 150 428 5.89e-15 79.7
MS.gene010438.t1 AT1G61190 26.990 289 185 11 156 428 150 428 5.89e-15 79.7
MS.gene010438.t1 AT1G61190 26.990 289 185 11 156 428 150 428 7.80e-15 79.7
MS.gene010438.t1 AT1G61180 27.817 284 189 11 156 428 149 427 3.11e-14 77.4
MS.gene010438.t1 AT1G61180 27.817 284 189 11 156 428 149 427 3.84e-14 77.4
MS.gene010438.t1 AT1G61300 27.609 297 188 11 150 428 29 316 5.11e-14 76.6
MS.gene010438.t1 AT1G61300 27.609 297 188 11 150 428 29 316 5.90e-14 76.6
MS.gene010438.t1 AT1G58410 26.962 293 197 11 146 423 147 437 2.07e-13 74.7
MS.gene010438.t1 AT1G58410 26.962 293 197 11 146 423 147 437 2.07e-13 74.7
MS.gene010438.t1 AT1G58410 26.962 293 197 11 146 423 147 437 2.07e-13 74.7
MS.gene010438.t1 AT1G58807 27.857 280 183 10 162 423 164 442 2.31e-13 74.7
MS.gene010438.t1 AT1G59124 27.857 280 183 10 162 423 164 442 2.31e-13 74.7
MS.gene010438.t1 AT1G58807 27.857 280 183 10 162 423 164 442 2.79e-13 74.3
MS.gene010438.t1 AT1G59124 27.857 280 183 10 162 423 164 442 2.79e-13 74.3
MS.gene010438.t1 AT1G58848 27.500 280 184 10 162 423 164 442 9.02e-13 72.8
MS.gene010438.t1 AT1G59218 27.500 280 184 10 162 423 164 442 9.02e-13 72.8
MS.gene010438.t1 AT1G59218 27.500 280 184 10 162 423 164 442 9.02e-13 72.8
MS.gene010438.t1 AT1G59218 27.500 280 184 10 162 423 164 442 9.02e-13 72.8
MS.gene010438.t1 AT1G58848 27.500 280 184 10 162 423 164 442 9.02e-13 72.8
MS.gene010438.t1 AT1G58400 25.940 266 174 11 177 423 181 442 9.80e-13 72.8
MS.gene010438.t1 AT1G58400 25.940 266 174 11 177 423 181 442 9.80e-13 72.8
MS.gene010438.t1 AT1G10920 24.719 356 235 13 131 458 10 360 1.01e-12 72.4
MS.gene010438.t1 AT1G10920 24.719 356 235 13 131 458 10 360 1.01e-12 72.4
MS.gene010438.t1 AT1G10920 24.719 356 235 13 131 458 10 360 1.01e-12 72.4
MS.gene010438.t1 AT1G58390 24.484 339 228 12 143 456 144 479 1.44e-12 72.0
MS.gene010438.t1 AT1G58390 24.484 339 228 12 143 456 144 479 1.44e-12 72.0
MS.gene010438.t1 AT1G12290 26.552 290 186 8 156 428 151 430 3.73e-12 70.9
MS.gene010438.t1 AT1G12290 26.552 290 186 8 156 428 109 388 4.39e-12 70.5
MS.gene010438.t1 AT1G12290 26.552 290 186 8 156 428 109 388 4.39e-12 70.5
MS.gene010438.t1 AT1G12290 26.552 290 186 8 156 428 109 388 4.39e-12 70.5
MS.gene010438.t1 AT1G58410 27.273 253 168 10 143 381 144 394 1.68e-11 68.6
MS.gene010438.t1 AT5G43470 24.684 316 210 12 131 425 135 443 1.98e-11 68.6
MS.gene010438.t1 AT5G43470 24.684 316 210 12 131 425 135 443 1.98e-11 68.6
MS.gene010438.t1 AT5G43470 24.684 316 210 12 131 425 135 443 1.98e-11 68.6
MS.gene010438.t1 AT5G43470 24.684 316 210 12 131 425 135 443 1.98e-11 68.6
MS.gene010438.t1 AT4G27220 30.196 255 154 12 187 427 149 393 2.91e-11 67.8
MS.gene010438.t1 AT5G48620 22.650 468 304 18 131 567 135 575 3.01e-11 67.8
MS.gene010438.t1 AT5G48620 22.650 468 304 18 131 567 135 575 3.01e-11 67.8
MS.gene010438.t1 AT5G48620 22.650 468 304 18 131 567 135 575 3.01e-11 67.8
MS.gene010438.t1 AT5G48620 22.650 468 304 18 131 567 135 575 3.01e-11 67.8
MS.gene010438.t1 AT5G48620 22.650 468 304 18 131 567 135 575 3.01e-11 67.8
MS.gene010438.t1 AT5G48620 22.650 468 304 18 131 567 135 575 3.01e-11 67.8
MS.gene010438.t1 AT4G27220 29.804 255 155 11 187 427 141 385 3.10e-11 67.8
MS.gene010438.t1 AT3G14470 29.134 254 157 11 178 417 194 438 8.79e-11 66.6
MS.gene010438.t1 AT3G14470 29.134 254 157 11 178 417 194 438 8.79e-11 66.6

Find 199 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTTAGAGTTCATCCTTTC+TGG 0.150495 5.4:+11452563 MS.gene010438:CDS
TATGACATTAATCAAATTTC+TGG 0.168395 5.4:-11450989 None:intergenic
CATCGACGGGTCAGTTTATA+AGG 0.209815 5.4:-11453379 None:intergenic
TTCTTCTGCATCATCGAAAA+AGG 0.210764 5.4:+11453822 MS.gene010438:CDS
CATGCATGGCTCAGGCTTAA+AGG 0.237169 5.4:+11453567 MS.gene010438:CDS
TGAAGGTTTAAATATGAAAA+TGG 0.245113 5.4:+11452967 MS.gene010438:CDS
GCCCTCTAGTTTCAGGTAAA+TGG 0.252523 5.4:-11453163 None:intergenic
CAGATTCCTTCTTCAACTTC+TGG 0.254170 5.4:-11453700 None:intergenic
GTGTCTTGACTCGGCAATTA+TGG 0.256992 5.4:+11452898 MS.gene010438:CDS
AATGTCAGATTATAAAATTT+TGG 0.265234 5.4:+11450083 MS.gene010438:CDS
TTTGGAAGCTTTGGCTCCTT+TGG 0.266951 5.4:+11447518 MS.gene010438:CDS
GGGGCAAGTTCCTATGCTTT+TGG 0.268355 5.4:+11452991 MS.gene010438:CDS
GGGTTCACCGCTGGTGATTC+AGG 0.274549 5.4:+11450678 MS.gene010438:CDS
CATTGAAACTTTGGAAGCTT+TGG 0.286764 5.4:+11447509 MS.gene010438:CDS
TACCAGGCGGTACTTAAGTA+TGG 0.297001 5.4:+11453943 MS.gene010438:CDS
TTGTTACCTTCAACAAAGTT+TGG 0.309146 5.4:+11450804 MS.gene010438:CDS
TGAGAATAGAAGGGATTTGA+TGG 0.317102 5.4:+11447749 MS.gene010438:CDS
TCAACAAGGCCTTCTGAGTT+AGG 0.323516 5.4:-11450045 None:intergenic
CAGAAGACCCAATCGGTTAA+TGG 0.324410 5.4:-11449971 None:intergenic
CCCATGCATACAGGCTCTTC+AGG 0.325696 5.4:-11447861 None:intergenic
ACAGGAATCCTCTGGTCTTC+AGG 0.327301 5.4:-11450880 None:intergenic
AGTTTGATAGGAATCAAATA+AGG 0.327311 5.4:+11447823 MS.gene010438:CDS
TCTTAAGAAGACCAATTATA+GGG 0.328708 5.4:+11453323 MS.gene010438:CDS
TTAGGATCAGAGCTCTATTC+TGG 0.349993 5.4:+11453745 MS.gene010438:CDS
CGGTATCCTGCCCCTATAAT+TGG 0.357418 5.4:-11453334 None:intergenic
TATTAGTCTTGGATGATGTT+TGG 0.359705 5.4:+11450022 MS.gene010438:CDS
TCAACAAAGTTTGGATATAT+CGG 0.360110 5.4:+11450813 MS.gene010438:CDS
CTGGTGATTCAGGTTATTGC+TGG 0.374523 5.4:+11450688 MS.gene010438:CDS
TGATTACTACCTTTGATTTG+TGG 0.374931 5.4:-11448005 None:intergenic
TCAGAGCTCTATTCTGGATC+TGG 0.380841 5.4:+11453751 MS.gene010438:CDS
TTGACTGGTTTGGGTGGATC+TGG 0.382247 5.4:+11447948 MS.gene010438:CDS
TGAAACCAGCATTGAAACTT+TGG 0.382289 5.4:+11447500 MS.gene010438:CDS
AAGCAGAGCCCTCTAGTTTC+AGG 0.382892 5.4:-11453170 None:intergenic
CTTTCTTCTTAAGCTTTCCT+TGG 0.383446 5.4:-11447686 None:intergenic
ATCTTAAGAAGACCAATTAT+AGG 0.386016 5.4:+11453322 MS.gene010438:CDS
ATGTTCAAGTTGAGAATAGA+AGG 0.387869 5.4:+11447739 MS.gene010438:CDS
TAAGTTGCATGGGAGGTGTC+TGG 0.392885 5.4:+11451743 MS.gene010438:CDS
TGAAAATGGATCAGTTTGAT+AGG 0.393405 5.4:+11447811 MS.gene010438:CDS
GAATGGTTTCAACGATTTGT+TGG 0.393705 5.4:+11447551 MS.gene010438:CDS
TCTCCCTGTAGCAGGACTTA+TGG 0.399080 5.4:-11452020 None:intergenic
ATGAGGCCAGCTGAATTAAC+GGG 0.399836 5.4:-11452538 None:intergenic
TTCTTGCAAACATCGCATCT+TGG 0.400650 5.4:-11452051 None:intergenic
AGTTCTGCCGGCAGATCAAT+GGG 0.404875 5.4:-11450910 None:intergenic
GTTTGATAGGAATCAAATAA+GGG 0.407774 5.4:+11447824 MS.gene010438:CDS
AGAAATTTGATTAATGTCAT+AGG 0.408066 5.4:+11450991 MS.gene010438:CDS
CTCTTGCTAAGAAGCTCTGC+TGG 0.410471 5.4:+11447979 MS.gene010438:CDS
TCAACTTCTGGCCTCAAGTT+GGG 0.411416 5.4:-11453688 None:intergenic
TCTTGCAAACATCGCATCTT+GGG 0.413592 5.4:-11452050 None:intergenic
CAGTTCTGCCGGCAGATCAA+TGG 0.419863 5.4:-11450911 None:intergenic
TGCACAATGTTCTTCAAGTT+GGG 0.421332 5.4:-11449892 None:intergenic
AATGAGGCCAGCTGAATTAA+CGG 0.430262 5.4:-11452539 None:intergenic
AATGGTTTCAACGATTTGTT+GGG 0.430601 5.4:+11447552 MS.gene010438:CDS
GCAGCACATACATGCCTGAT+AGG 0.436491 5.4:+11450214 MS.gene010438:CDS
ATATATCCAAACTTTGTTGA+AGG 0.447490 5.4:-11450810 None:intergenic
CTGCACAATGTTCTTCAAGT+TGG 0.449800 5.4:-11449893 None:intergenic
TGCCGTCAAGCTCATGAGTT+GGG 0.454821 5.4:-11452600 None:intergenic
CGGTCAAATGCATATGATCA+AGG 0.458163 5.4:-11453978 None:intergenic
CAAGTGGATCCAACTCGAAT+GGG 0.458395 5.4:-11450140 None:intergenic
CTTTCACAGCTACAACAACT+TGG 0.459035 5.4:-11452625 None:intergenic
CCTTGGTAACGTGGGAAAGA+AGG 0.460904 5.4:-11447669 None:intergenic
ACGGGTCAGTTTATAAGGCT+TGG 0.464724 5.4:-11453374 None:intergenic
AAAAGAGTGCTTCATGGATA+CGG 0.465073 5.4:+11450849 MS.gene010438:CDS
AGCTTCCAAAGTTTCAATGC+TGG 0.465355 5.4:-11447505 None:intergenic
ACAGATAGTGAAAGGCTGTA+AGG 0.465465 5.4:+11450657 MS.gene010438:intron
ATTTGAACACTGTGGATGTC+GGG 0.469451 5.4:+11449921 MS.gene010438:CDS
CTAACCTCAAAATCAGTGAT+TGG 0.470214 5.4:-11451802 None:intergenic
GGCTGTCACTTCGCATCGAC+GGG 0.470821 5.4:-11453392 None:intergenic
CAGATCCCCGTTAATTCAGC+TGG 0.472004 5.4:+11452532 MS.gene010438:intron
AGAAGGAATCTGTCATATCT+TGG 0.472510 5.4:+11453711 MS.gene010438:CDS
AATCTCTCTATCTCTTCTCT+TGG 0.472775 5.4:-11447579 None:intergenic
TCACGGACAAGATTCCTATC+AGG 0.473862 5.4:-11450228 None:intergenic
CTATTAAGTGGAGGTGCTGT+TGG 0.475176 5.4:+11447405 MS.gene010438:CDS
TTCAACTTCTGGCCTCAAGT+TGG 0.478816 5.4:-11453689 None:intergenic
GTGAGGTATCTGACTCAATC+TGG 0.485020 5.4:-11453891 None:intergenic
TCGGTTAATGGCATCGTCAT+CGG 0.485910 5.4:-11449959 None:intergenic
GGTGATTAAATCGTTGTCAA+TGG 0.485925 5.4:-11450968 None:intergenic
TATACTTATAGATTGTTGAC+AGG 0.486321 5.4:+11453519 MS.gene010438:intron
TCAATCTTCAACTTATTCAA+AGG 0.487246 5.4:-11447894 None:intergenic
CCTTTGGTTGCAGAAATGAA+TGG 0.490038 5.4:+11447534 MS.gene010438:CDS
AAATCCAATACTATTAGTCT+TGG 0.490727 5.4:+11450011 MS.gene010438:CDS
ATCTTGGCTCATATGTGGTT+AGG 0.490899 5.4:+11453727 MS.gene010438:CDS
AAGCTTAAGAAGAAAGATGA+AGG 0.493473 5.4:+11447693 MS.gene010438:CDS
AAGATTGAATTGATGAAAGA+TGG 0.496149 5.4:+11447909 MS.gene010438:CDS
TGAGAAGTGGCAAAATATGA+AGG 0.496940 5.4:+11450732 MS.gene010438:CDS
TCAGATACCTCACCAGCCTA+TGG 0.497390 5.4:+11453901 MS.gene010438:CDS
TATGGAGATGGATTCAGATC+AGG 0.500064 5.4:+11453919 MS.gene010438:CDS
AGATAATGCATGCATGGCTC+AGG 0.501774 5.4:+11453559 MS.gene010438:CDS
TTCAATGCTGGTTTCAAGTG+TGG 0.506107 5.4:-11447493 None:intergenic
CTTGATCATATGCATTTGAC+CGG 0.507134 5.4:+11453979 MS.gene010438:CDS
GACGATGCCATTAACCGATT+GGG 0.507819 5.4:+11449964 MS.gene010438:CDS
TCATCCATTCCCATGCATAC+AGG 0.511272 5.4:-11447870 None:intergenic
GCGATGCTTCTCCCTGTAGC+AGG 0.512344 5.4:-11452028 None:intergenic
TCGTCATCGGTTTGAAACTC+AGG 0.512539 5.4:-11449946 None:intergenic
TCAATGCTGGTTTCAAGTGT+GGG 0.517607 5.4:-11447492 None:intergenic
TCCTGAAGAGCCTGTATGCA+TGG 0.520250 5.4:+11447860 MS.gene010438:CDS
CATAAAATTCTAGTATATCT+CGG 0.520609 5.4:-11452946 None:intergenic
TGACGATGCCATTAACCGAT+TGG 0.523155 5.4:+11449963 MS.gene010438:CDS
AGAAGACCAATTATAGGGGC+AGG 0.526129 5.4:+11453328 MS.gene010438:CDS
ACCGATTGGGTCTTCTGTTG+AGG 0.528164 5.4:+11449977 MS.gene010438:CDS
TTTGTATACAAAATCTGTGC+GGG 0.529190 5.4:+11451688 MS.gene010438:CDS
TCATCCAAGACTAATAGTAT+TGG 0.531730 5.4:-11450015 None:intergenic
CAGATAGTGAAAGGCTGTAA+GGG 0.531994 5.4:+11450658 MS.gene010438:intron
AAATCTTCCATGGCAAATCT+CGG 0.533441 5.4:-11451719 None:intergenic
GCAGAGCTTCTTAGCAAGAG+TGG 0.533470 5.4:-11447976 None:intergenic
TTAAGTGGAGGTGCTGTTGG+AGG 0.533913 5.4:+11447408 MS.gene010438:CDS
ACCTCACCAGCCTATGGAGA+TGG 0.534287 5.4:+11453907 MS.gene010438:CDS
TTCGATGATGCAGAAGAAGA+CGG 0.535164 5.4:-11453817 None:intergenic
CTGAATCCATCTCCATAGGC+TGG 0.535577 5.4:-11453913 None:intergenic
TATTTGAACACTGTGGATGT+CGG 0.535776 5.4:+11449920 MS.gene010438:CDS
CTTACCATAAGTCCTGCTAC+AGG 0.538626 5.4:+11452016 MS.gene010438:CDS
TGGCTGTCACTTCGCATCGA+CGG 0.539258 5.4:-11453393 None:intergenic
TCAAGTGGATCCAACTCGAA+TGG 0.539353 5.4:-11450141 None:intergenic
CTCATGAGATAATGCATGCA+TGG 0.539682 5.4:+11453553 MS.gene010438:CDS
ATTTGGTACCCCATTCGAGT+TGG 0.540077 5.4:+11450131 MS.gene010438:CDS
AGCACTAAAAGAGGCCATAG+AGG 0.541584 5.4:+11453024 MS.gene010438:CDS
TGCCCAACTCATGAGCTTGA+CGG 0.543153 5.4:+11452598 MS.gene010438:CDS
GTCATATCTTGGCTCATATG+TGG 0.545602 5.4:+11453722 MS.gene010438:CDS
AAAGAGTGCTTCATGGATAC+GGG 0.546487 5.4:+11450850 MS.gene010438:CDS
TTGTTGTAGCTGTGAAAGAA+TGG 0.548998 5.4:+11452630 MS.gene010438:CDS
CAAGCATGGCAGACGAAGCA+TGG 0.548999 5.4:-11451772 None:intergenic
CAGAGCTCTATTCTGGATCT+GGG 0.549217 5.4:+11453752 MS.gene010438:CDS
TGTTCAAGTTGAGAATAGAA+GGG 0.550405 5.4:+11447740 MS.gene010438:CDS
GTATATCTCGGTAGAGAGGT+TGG 0.550776 5.4:-11452934 None:intergenic
GGTCTTCTGTTGAGGCAAGT+TGG 0.550993 5.4:+11449985 MS.gene010438:CDS
TGGATTCAGATCAGGTTACC+AGG 0.551196 5.4:+11453927 MS.gene010438:CDS
TGTTATATGGTTACCTAGGA+AGG 0.552829 5.4:-11453432 None:intergenic
CTGTAGCAGGACTTATGGTA+AGG 0.553104 5.4:-11452015 None:intergenic
CATGCATTATCTCATGAGCT+AGG 0.555420 5.4:-11453548 None:intergenic
GGGCAGTAACAGGAATCCTC+TGG 0.559280 5.4:-11450888 None:intergenic
GCCCATACTTAAGTACCGCC+TGG 0.560245 5.4:-11453945 None:intergenic
TGATCTGAATCCATCTCCAT+AGG 0.563815 5.4:-11453917 None:intergenic
TGATTGGCAGATGGCAAGCA+TGG 0.564914 5.4:-11451786 None:intergenic
GTGCCGTCAAGCTCATGAGT+TGG 0.570183 5.4:-11452601 None:intergenic
TGCATGGCGGATCTATTAAG+TGG 0.570389 5.4:+11447393 None:intergenic
TTAGAGAAACACATAAGAGA+AGG 0.572972 5.4:+11447600 MS.gene010438:CDS
GGAAAGACAAGCACTAAAAG+AGG 0.575269 5.4:+11453015 MS.gene010438:CDS
AGGCTGTAAGGGTTCACCGC+TGG 0.576228 5.4:+11450669 MS.gene010438:CDS
GAATAGAAGGGATTTGATGG+AGG 0.577512 5.4:+11447752 MS.gene010438:CDS
TTAAGCTTTCCTTGGTAACG+TGG 0.577842 5.4:-11447678 None:intergenic
GGTTTAAATATGAAAATGGA+GGG 0.578948 5.4:+11452971 MS.gene010438:CDS
TCTGAGTTATGCAGTTCTGC+CGG 0.578981 5.4:-11450922 None:intergenic
CTCAGAAGAAGATGGTGCAA+AGG 0.581165 5.4:+11450939 MS.gene010438:CDS
TGCAATGCCGAGATTTGCCA+TGG 0.581684 5.4:+11451712 MS.gene010438:CDS
TTGAGGCCAGAAGTTGAAGA+AGG 0.583699 5.4:+11453694 MS.gene010438:CDS
TGTCTTTCCACCAAAAGCAT+AGG 0.584605 5.4:-11453001 None:intergenic
ACCAGGCGGTACTTAAGTAT+GGG 0.585146 5.4:+11453944 MS.gene010438:CDS
CCATTCATTTCTGCAACCAA+AGG 0.585398 5.4:-11447534 None:intergenic
TTATAGGTTATCCCAACTTG+AGG 0.585861 5.4:+11453677 MS.gene010438:intron
CCTTCTTTCCCACGTTACCA+AGG 0.586461 5.4:+11447669 MS.gene010438:CDS
TTCTATGCACAGATAGTGAA+AGG 0.587153 5.4:+11450649 MS.gene010438:intron
CTGCATAACTCAGAAGAAGA+TGG 0.590966 5.4:+11450931 MS.gene010438:CDS
ACCATTTACCTGAAACTAGA+GGG 0.591314 5.4:+11453162 MS.gene010438:CDS
TCATAGGTCTCAGAAGAAGA+TGG 0.591777 5.4:+11451007 MS.gene010438:CDS
GCCTCAACAGAAGACCCAAT+CGG 0.592079 5.4:-11449978 None:intergenic
AGGTTTAAATATGAAAATGG+AGG 0.594562 5.4:+11452970 MS.gene010438:CDS
TGCTGGGATCCACAAATCAA+AGG 0.596374 5.4:+11447996 MS.gene010438:CDS
AAGGCCATACAAAACAAGAA+TGG 0.597233 5.4:-11453413 None:intergenic
AGAGCCTGTATGCATGGGAA+TGG 0.597515 5.4:+11447866 MS.gene010438:CDS
CAAAATCAGTGATTGGCAGA+TGG 0.598645 5.4:-11451795 None:intergenic
TACCATTTACCTGAAACTAG+AGG 0.599700 5.4:+11453161 MS.gene010438:CDS
TCTTGCTAAGAAGCTCTGCT+GGG 0.599802 5.4:+11447980 MS.gene010438:CDS
TCCATCTCCATAGGCTGGTG+AGG 0.600925 5.4:-11453908 None:intergenic
TTTGATAGGAATCAAATAAG+GGG 0.602155 5.4:+11447825 MS.gene010438:CDS
TAAGCTTTCCTTGGTAACGT+GGG 0.602459 5.4:-11447677 None:intergenic
GATGTTTGGCCTAACTCAGA+AGG 0.604595 5.4:+11450036 MS.gene010438:CDS
GTAAGGACTATTGCTAGACA+TGG 0.605124 5.4:-11451998 None:intergenic
GATGAACTCTAAACTCAATG+AGG 0.605371 5.4:-11452555 None:intergenic
TGGTTATCATGTCTGTGACT+CGG 0.605556 5.4:-11453354 None:intergenic
ACTGCATGATTACGATCAAG+TGG 0.605604 5.4:-11450156 None:intergenic
AAAGCAAGAAGCTTACTCGA+TGG 0.613136 5.4:+11447640 MS.gene010438:CDS
TTCTGCCGGCAGATCAATGG+GGG 0.614894 5.4:-11450908 None:intergenic
GCACTAAAAGAGGCCATAGA+GGG 0.619837 5.4:+11453025 MS.gene010438:CDS
GGAATTTGAACTTCTCAACA+AGG 0.619958 5.4:-11450059 None:intergenic
AATCAAATAAGGGGTTTGTG+TGG 0.623843 5.4:+11447834 MS.gene010438:CDS
GATTCAATTGAGCAAAGTGA+TGG 0.624063 5.4:-11450188 None:intergenic
ATGTCTTGAGTGTCTTGACT+CGG 0.625398 5.4:+11452889 MS.gene010438:CDS
TCTAGTATATCTCGGTAGAG+AGG 0.625665 5.4:-11452938 None:intergenic
CCTGAAGAGCCTGTATGCAT+GGG 0.631595 5.4:+11447861 MS.gene010438:CDS
GACTATTTCCTGAAGACCAG+AGG 0.631906 5.4:+11450872 MS.gene010438:CDS
CTTAAGAAGACCAATTATAG+GGG 0.632624 5.4:+11453324 MS.gene010438:CDS
GGTCAAATGCATATGATCAA+GGG 0.635541 5.4:-11453977 None:intergenic
TTACCATAAGTCCTGCTACA+GGG 0.636079 5.4:+11452017 MS.gene010438:CDS
AGCTTAAGAAGAAAGATGAA+GGG 0.648390 5.4:+11447694 MS.gene010438:CDS
GTTTAAATATGAAAATGGAG+GGG 0.650220 5.4:+11452972 MS.gene010438:CDS
ATTTGTATACAAAATCTGTG+CGG 0.668443 5.4:+11451687 MS.gene010438:CDS
AGTGATATTAGACTCAAGAA+CGG 0.673387 5.4:-11450773 None:intergenic
AAGTGGATCCAACTCGAATG+GGG 0.677606 5.4:-11450139 None:intergenic
GCATGGCAGACGAAGCATGG+TGG 0.685519 5.4:-11451769 None:intergenic
GTTCTGCCGGCAGATCAATG+GGG 0.689050 5.4:-11450909 None:intergenic
CATTGATGATGATGAAGATG+AGG 0.691138 5.4:-11453791 None:intergenic
ATGGCGGATCTATTAAGTGG+AGG 0.698581 5.4:+11447396 MS.gene010438:CDS
GATGATGATGAAGATGAGGA+CGG 0.720069 5.4:-11453787 None:intergenic
TGATAGGAATCTTGTCCGTG+AGG 0.725852 5.4:+11450230 MS.gene010438:CDS
TTGTAGCTGTGAAAGAATGG+AGG 0.727987 5.4:+11452633 MS.gene010438:CDS
TGAGGCCAGCTGAATTAACG+GGG 0.731118 5.4:-11452537 None:intergenic
GCAATAACCTGAATCACCAG+CGG 0.734403 5.4:-11450685 None:intergenic
GATGATGCAGAAGAAGACGG+AGG 0.745498 5.4:-11453814 None:intergenic
CAGACACTATTTGAACACTG+TGG 0.785580 5.4:+11449913 MS.gene010438:CDS
ATTCAGATCAGGTTACCAGG+CGG 0.802715 5.4:+11453930 MS.gene010438:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGAAAAAAAAAAAAAAAAAA+AGG + chr5.4:11452423-11452442 MS.gene010438:intron 10.0%
!! TATATTAAATCTTCTAATAT+GGG + chr5.4:11450325-11450344 MS.gene010438:intron 10.0%
!! TTATATTAAATCTTCTAATA+TGG + chr5.4:11450324-11450343 MS.gene010438:intron 10.0%
!!! AAAGTTTTATATTAGATAAT+AGG - chr5.4:11452754-11452773 None:intergenic 10.0%
!!! AATATATGGTTTTTTTTTAT+AGG + chr5.4:11453661-11453680 MS.gene010438:intron 10.0%
!!! ATATATTTTTATTACAAAGA+GGG - chr5.4:11452794-11452813 None:intergenic 10.0%
!!! ATGAAATGAAATTATTTTTT+AGG - chr5.4:11449757-11449776 None:intergenic 10.0%
!!! TATATATTTTTATTACAAAG+AGG - chr5.4:11452795-11452814 None:intergenic 10.0%
!! AATTAAAAAACTTGATTGTT+AGG + chr5.4:11451490-11451509 MS.gene010438:intron 15.0%
!! CAAAAAAAAATATATCACAA+GGG + chr5.4:11452339-11452358 MS.gene010438:intron 15.0%
!! TCTAATACATATTAGAATTT+GGG - chr5.4:11448945-11448964 None:intergenic 15.0%
!! TTAAGAATATGATATCTATA+TGG - chr5.4:11451417-11451436 None:intergenic 15.0%
!! TTTCAATTAAGATATATATG+TGG + chr5.4:11449496-11449515 MS.gene010438:intron 15.0%
!!! AAATTATTACTACTGTTTTA+GGG + chr5.4:11448829-11448848 MS.gene010438:intron 15.0%
!!! AAATTTTATAATCTGACATT+TGG - chr5.4:11450083-11450102 None:intergenic 15.0%
!!! AATGTCAGATTATAAAATTT+TGG + chr5.4:11450083-11450102 MS.gene010438:CDS 15.0%
!!! ATTCTAGTTTTATATTTTCA+TGG + chr5.4:11451617-11451636 MS.gene010438:intron 15.0%
!!! TAAATTATTACTACTGTTTT+AGG + chr5.4:11448828-11448847 MS.gene010438:intron 15.0%
!!! TCAAGTTTTTTAATTCATTT+TGG - chr5.4:11451485-11451504 None:intergenic 15.0%
!!! TTTTAAATGAAAGAAATTTC+AGG + chr5.4:11452453-11452472 MS.gene010438:intron 15.0%
!!! TTTTTTTTTTTTTTCCAGTA+AGG - chr5.4:11452419-11452438 None:intergenic 15.0%
!! AGAAATTTGATTAATGTCAT+AGG + chr5.4:11450991-11451010 MS.gene010438:CDS 20.0%
!! ATAATAGCTTATAACTCATA+TGG + chr5.4:11449204-11449223 MS.gene010438:intron 20.0%
!! CATAAAATTCTAGTATATCT+CGG - chr5.4:11452949-11452968 None:intergenic 20.0%
!! CTCTAATACATATTAGAATT+TGG - chr5.4:11448946-11448965 None:intergenic 20.0%
!! GCAAAAAAAAATATATCACA+AGG + chr5.4:11452338-11452357 MS.gene010438:intron 20.0%
!! TATGACATTAATCAAATTTC+TGG - chr5.4:11450992-11451011 None:intergenic 20.0%
!! TCTGATACCATATTAAAATT+TGG - chr5.4:11449050-11449069 None:intergenic 20.0%
!! TGAAGGTTTAAATATGAAAA+TGG + chr5.4:11452967-11452986 MS.gene010438:CDS 20.0%
!! TGATGAAAATATTTCAATCA+CGG + chr5.4:11451362-11451381 MS.gene010438:intron 20.0%
!! TTTCTTTAGTCTATTACAAT+AGG + chr5.4:11451931-11451950 MS.gene010438:intron 20.0%
!!! AAAAGATATTTTGAATCCTT+TGG - chr5.4:11452848-11452867 None:intergenic 20.0%
!!! AAAGCTATTTTGTTTTGAAT+AGG + chr5.4:11449826-11449845 MS.gene010438:intron 20.0%
!!! GAATGAATATTTTATCTGTA+AGG + chr5.4:11448324-11448343 MS.gene010438:intron 20.0%
!!! GATATACTAGAATTTTATGA+AGG + chr5.4:11452950-11452969 MS.gene010438:CDS 20.0%
!!! GCTATTCTTATTTATTAAAG+AGG + chr5.4:11452211-11452230 MS.gene010438:intron 20.0%
!!! GTAATCAAGGTTTTAAATAA+CGG + chr5.4:11448021-11448040 MS.gene010438:intron 20.0%
!!! GTCTAATCCAAATTTTAATA+TGG + chr5.4:11449040-11449059 MS.gene010438:intron 20.0%
!!! TATTTTGTTTTATGATGCTA+AGG + chr5.4:11453631-11453650 MS.gene010438:intron 20.0%
!!! TTCTTATTTATTAAAGAGGT+CGG + chr5.4:11452215-11452234 MS.gene010438:intron 20.0%
! AAAAGACTAAACATTTGAGA+AGG - chr5.4:11452731-11452750 None:intergenic 25.0%
! AAGATTGAATTGATGAAAGA+TGG + chr5.4:11447909-11447928 MS.gene010438:CDS 25.0%
! AGGTTTAAATATGAAAATGG+AGG + chr5.4:11452970-11452989 MS.gene010438:CDS 25.0%
! AGTTTGATAGGAATCAAATA+AGG + chr5.4:11447823-11447842 MS.gene010438:CDS 25.0%
! ATAAAGAAGTAAAGAATGCA+TGG + chr5.4:11451195-11451214 MS.gene010438:intron 25.0%
! ATACATATTAGAATTTGGGT+TGG - chr5.4:11448941-11448960 None:intergenic 25.0%
! ATAGTCTAATTGAGATTGAA+TGG + chr5.4:11449636-11449655 MS.gene010438:intron 25.0%
! ATATATCCAAACTTTGTTGA+AGG - chr5.4:11450813-11450832 None:intergenic 25.0%
! ATCAAAATTTCCTCTTATCA+TGG + chr5.4:11452131-11452150 MS.gene010438:intron 25.0%
! ATCTTAAGAAGACCAATTAT+AGG + chr5.4:11453322-11453341 MS.gene010438:CDS 25.0%
! CATTCACTGTATATAATTCA+AGG + chr5.4:11453486-11453505 MS.gene010438:intron 25.0%
! GAGTCTTTATGAAAAATTGT+GGG + chr5.4:11452280-11452299 MS.gene010438:intron 25.0%
! GGTTTAAATATGAAAATGGA+GGG + chr5.4:11452971-11452990 MS.gene010438:CDS 25.0%
! GTTTAAATATGAAAATGGAG+GGG + chr5.4:11452972-11452991 MS.gene010438:CDS 25.0%
! GTTTGATAGGAATCAAATAA+GGG + chr5.4:11447824-11447843 MS.gene010438:CDS 25.0%
! TACTAATACTATTACTACCA+AGG - chr5.4:11448790-11448809 None:intergenic 25.0%
! TAGTAACAAACCTTATGTTA+TGG + chr5.4:11449406-11449425 MS.gene010438:intron 25.0%
! TATACTTATAGATTGTTGAC+AGG + chr5.4:11453519-11453538 MS.gene010438:intron 25.0%
! TCAACAAAGTTTGGATATAT+CGG + chr5.4:11450813-11450832 MS.gene010438:CDS 25.0%
! TCAATCTTCAACTTATTCAA+AGG - chr5.4:11447897-11447916 None:intergenic 25.0%
! TCTTAAGAAGACCAATTATA+GGG + chr5.4:11453323-11453342 MS.gene010438:CDS 25.0%
! TGAGTCTTTATGAAAAATTG+TGG + chr5.4:11452279-11452298 MS.gene010438:intron 25.0%
! TTCCATTGTATTTGTAAGTT+AGG + chr5.4:11451439-11451458 MS.gene010438:intron 25.0%
! TTGTGAAAGTAGATGTTATA+TGG - chr5.4:11453448-11453467 None:intergenic 25.0%
! TTTGATAGGAATCAAATAAG+GGG + chr5.4:11447825-11447844 MS.gene010438:CDS 25.0%
!! AAATATCTTTTGCTTGATGA+TGG + chr5.4:11452857-11452876 MS.gene010438:CDS 25.0%
!! AAATCCAATACTATTAGTCT+TGG + chr5.4:11450011-11450030 MS.gene010438:CDS 25.0%
!! ACAACTTTGAAAACTAATCA+GGG - chr5.4:11450378-11450397 None:intergenic 25.0%
!! ATTTCTTGCATGATTTTCAT+CGG - chr5.4:11453608-11453627 None:intergenic 25.0%
!! CTCTTTTCTACTCTAATTTT+GGG + chr5.4:11449689-11449708 MS.gene010438:intron 25.0%
!! TACATATTAGAATTTGGGTT+GGG - chr5.4:11448940-11448959 None:intergenic 25.0%
!! TCTCTTTTCTACTCTAATTT+TGG + chr5.4:11449688-11449707 MS.gene010438:intron 25.0%
!! TTAGTGACATTCATTAGTTT+GGG + chr5.4:11448182-11448201 MS.gene010438:intron 25.0%
!! TTGACTTTTAACAAGATTTG+TGG - chr5.4:11448158-11448177 None:intergenic 25.0%
!!! AAGGTTTTAAATAACGGTAA+CGG + chr5.4:11448027-11448046 MS.gene010438:intron 25.0%
!!! ATTTTAGAGGGGAAAAAAAT+GGG - chr5.4:11448405-11448424 None:intergenic 25.0%
!!! GTCTTTACACACTTTTAATT+CGG + chr5.4:11453245-11453264 MS.gene010438:intron 25.0%
!!! TCAATGGTTCATTTTTAGTA+AGG - chr5.4:11451653-11451672 None:intergenic 25.0%
!!! TCTTGAGATTTTGATGAAAA+TGG + chr5.4:11447797-11447816 MS.gene010438:CDS 25.0%
!!! TTCTAAATTTTGCTGATTCA+CGG + chr5.4:11451295-11451314 MS.gene010438:intron 25.0%
AAAATATTTCAATCACGGAG+GGG + chr5.4:11451367-11451386 MS.gene010438:intron 30.0%
AAAGTACATCTTTCTTGAAG+TGG - chr5.4:11451133-11451152 None:intergenic 30.0%
AACAAACCTTATGTTATGGT+TGG + chr5.4:11449410-11449429 MS.gene010438:intron 30.0%
AAGCTTAAGAAGAAAGATGA+AGG + chr5.4:11447693-11447712 MS.gene010438:CDS 30.0%
AATGTTAAAGAGTTCCAGAT+TGG + chr5.4:11448878-11448897 MS.gene010438:intron 30.0%
AGAGTAGAAAAGAGATGATA+GGG - chr5.4:11449683-11449702 None:intergenic 30.0%
AGCTTAAGAAGAAAGATGAA+GGG + chr5.4:11447694-11447713 MS.gene010438:CDS 30.0%
AGTGATATTAGACTCAAGAA+CGG - chr5.4:11450776-11450795 None:intergenic 30.0%
AGTGTGTAAAGACTTGAATT+TGG - chr5.4:11453238-11453257 None:intergenic 30.0%
ATATGTGGTCAATCACTTAT+AGG + chr5.4:11449511-11449530 MS.gene010438:intron 30.0%
ATCAAAAATGGTCGTGAATT+CGG + chr5.4:11447468-11447487 MS.gene010438:CDS 30.0%
ATCCATATAGTAGACATCTT+TGG + chr5.4:11451593-11451612 MS.gene010438:intron 30.0%
ATTAAGCTGTTTATCCAAAC+AGG - chr5.4:11450415-11450434 None:intergenic 30.0%
ATTCATTCTGTGTCAATATG+TGG - chr5.4:11448312-11448331 None:intergenic 30.0%
CAAAATAACAAACCGAAGTT+AGG - chr5.4:11453115-11453134 None:intergenic 30.0%
CAAATCAAAGGTAGTAATCA+AGG + chr5.4:11448008-11448027 MS.gene010438:intron 30.0%
CTAATTGAGATTGAATGGAA+TGG + chr5.4:11449641-11449660 MS.gene010438:intron 30.0%
CTAGTATGCAATACTAACTA+TGG - chr5.4:11450609-11450628 None:intergenic 30.0%
CTTAAGAAGACCAATTATAG+GGG + chr5.4:11453324-11453343 MS.gene010438:CDS 30.0%
GAAAATATTTCAATCACGGA+GGG + chr5.4:11451366-11451385 MS.gene010438:intron 30.0%
GATACAAAGTACATATGCTT+TGG + chr5.4:11452172-11452191 MS.gene010438:intron 30.0%
GCTAAGGTAGACAAAATATA+TGG + chr5.4:11453647-11453666 MS.gene010438:intron 30.0%
GCTCTTCAAACAATCAAAAA+TGG + chr5.4:11447456-11447475 MS.gene010438:CDS 30.0%
GCTTATAACTCATATGGAAA+TGG + chr5.4:11449210-11449229 MS.gene010438:intron 30.0%
GCTTTCTAAATCAAGAAGAA+TGG - chr5.4:11449811-11449830 None:intergenic 30.0%
GTCCTAACTTACAAATACAA+TGG - chr5.4:11451444-11451463 None:intergenic 30.0%
GTTAGTGACATTCATTAGTT+TGG + chr5.4:11448181-11448200 MS.gene010438:intron 30.0%
TAGAGTAGAAAAGAGATGAT+AGG - chr5.4:11449684-11449703 None:intergenic 30.0%
TAGATGTTATATGGTTACCT+AGG - chr5.4:11453439-11453458 None:intergenic 30.0%
TCATCCAAGACTAATAGTAT+TGG - chr5.4:11450018-11450037 None:intergenic 30.0%
TCATCCTGCTATTACTAATT+AGG + chr5.4:11452682-11452701 MS.gene010438:intron 30.0%
TGAAAACATCACAAGTCATT+GGG + chr5.4:11452368-11452387 MS.gene010438:intron 30.0%
TGAAAATATTTCAATCACGG+AGG + chr5.4:11451365-11451384 MS.gene010438:intron 30.0%
TGAAAATGGATCAGTTTGAT+AGG + chr5.4:11447811-11447830 MS.gene010438:CDS 30.0%
TGATTAATGTCATAGGTTCA+AGG + chr5.4:11451074-11451093 MS.gene010438:intron 30.0%
TGCAACTTAAAAATCTTCCA+TGG - chr5.4:11451732-11451751 None:intergenic 30.0%
TGCTTATCGTATAAGTACTT+TGG + chr5.4:11450454-11450473 MS.gene010438:intron 30.0%
TTAGAGAAACACATAAGAGA+AGG + chr5.4:11447600-11447619 MS.gene010438:CDS 30.0%
TTATAGGAAAGTCTTCTAGA+TGG + chr5.4:11449527-11449546 MS.gene010438:intron 30.0%
TTCACTCTCACTCTTAATTT+GGG - chr5.4:11448464-11448483 None:intergenic 30.0%
TTCCAAAGATGTCTACTATA+TGG - chr5.4:11451598-11451617 None:intergenic 30.0%
TTGTTACCTTCAACAAAGTT+TGG + chr5.4:11450804-11450823 MS.gene010438:CDS 30.0%
TTTCACTCTCACTCTTAATT+TGG - chr5.4:11448465-11448484 None:intergenic 30.0%
! AACTGATTCAGACTAATGTA+TGG + chr5.4:11451523-11451542 MS.gene010438:intron 30.0%
! AATGGTTTCAACGATTTGTT+GGG + chr5.4:11447552-11447571 MS.gene010438:CDS 30.0%
! AATTTTGTAAGTATCTCAGC+AGG + chr5.4:11452072-11452091 MS.gene010438:intron 30.0%
! AGATGAGATGAGATTTTAGA+GGG - chr5.4:11448417-11448436 None:intergenic 30.0%
! ATAGCAGGATGAAATGTTTT+TGG - chr5.4:11452674-11452693 None:intergenic 30.0%
! ATTAAGTTGTTTGTCCAAAC+AGG + chr5.4:11449315-11449334 MS.gene010438:intron 30.0%
! GACAACTTTGAAAACTAATC+AGG - chr5.4:11450379-11450398 None:intergenic 30.0%
! GCTTATTTGAGTTTATCTAC+TGG - chr5.4:11450573-11450592 None:intergenic 30.0%
! GCTTTTCATTATCGAACATA+GGG + chr5.4:11453134-11453153 MS.gene010438:intron 30.0%
! GTTTTCATTGTCTGGATAAT+TGG + chr5.4:11449458-11449477 MS.gene010438:intron 30.0%
! TAACTATGGACTGTTTGAAT+TGG - chr5.4:11450595-11450614 None:intergenic 30.0%
! TGCTTTTCATTATCGAACAT+AGG + chr5.4:11453133-11453152 MS.gene010438:intron 30.0%
! TTAAGTTGTTTGTCCAAACA+GGG + chr5.4:11449316-11449335 MS.gene010438:intron 30.0%
! TTTCTTGCATGATTTTCATC+GGG - chr5.4:11453607-11453626 None:intergenic 30.0%
! TTTTCTTCTCAGCGTTAAAA+CGG + chr5.4:11448690-11448709 MS.gene010438:intron 30.0%
!! AGATTGGTTTGGATAAGATA+CGG + chr5.4:11448894-11448913 MS.gene010438:intron 30.0%
!! ATATTTTGCCACTTCTCAAA+AGG - chr5.4:11450730-11450749 None:intergenic 30.0%
!! ATGTTCAAGTTGAGAATAGA+AGG + chr5.4:11447739-11447758 MS.gene010438:CDS 30.0%
!! ATTTTTCAGAACTACGTCAA+TGG - chr5.4:11451669-11451688 None:intergenic 30.0%
!! GATTTTAGAGGGGAAAAAAA+TGG - chr5.4:11448406-11448425 None:intergenic 30.0%
!! TAATTGGTCTTCTTAAGATC+TGG - chr5.4:11453321-11453340 None:intergenic 30.0%
!! TATTAGTCTTGGATGATGTT+TGG + chr5.4:11450022-11450041 MS.gene010438:CDS 30.0%
!! TCTTTTTGTTGTCCTAACTT+CGG + chr5.4:11453100-11453119 MS.gene010438:intron 30.0%
!! TGATTACTACCTTTGATTTG+TGG - chr5.4:11448008-11448027 None:intergenic 30.0%
!! TGTTCAAGTTGAGAATAGAA+GGG + chr5.4:11447740-11447759 MS.gene010438:CDS 30.0%
!! TTGCATTTGTTTTCATTGTC+TGG + chr5.4:11449450-11449469 MS.gene010438:intron 30.0%
!!! ACTACCAAGGTTTTAAATAC+AGG - chr5.4:11448777-11448796 None:intergenic 30.0%
!!! GGAAGATTTTTAAGTTGCAT+GGG + chr5.4:11451733-11451752 MS.gene010438:CDS 30.0%
!!! TGGAAGATTTTTAAGTTGCA+TGG + chr5.4:11451732-11451751 MS.gene010438:CDS 30.0%
!!! TTGTTTTGAATAGGCAAGTT+TGG + chr5.4:11449835-11449854 MS.gene010438:intron 30.0%
AAAACGGCAAATAACGGTAA+CGG + chr5.4:11448706-11448725 MS.gene010438:intron 35.0%
AAATATTTCAATCACGGAGG+GGG + chr5.4:11451368-11451387 MS.gene010438:intron 35.0%
AAATCTTCCATGGCAAATCT+CGG - chr5.4:11451722-11451741 None:intergenic 35.0%
AAATGCATGTCCATGATAAG+AGG - chr5.4:11452144-11452163 None:intergenic 35.0%
AAGACTTGAATTTGGAAGCA+AGG - chr5.4:11453230-11453249 None:intergenic 35.0%
AAGGCCATACAAAACAAGAA+TGG - chr5.4:11453416-11453435 None:intergenic 35.0%
AATCAAATAAGGGGTTTGTG+TGG + chr5.4:11447834-11447853 MS.gene010438:CDS 35.0%
AATCTCTCTATCTCTTCTCT+TGG - chr5.4:11447582-11447601 None:intergenic 35.0%
ACAACAGCGAAACATAGTTA+CGG - chr5.4:11448577-11448596 None:intergenic 35.0%
ACATTTGAGAAGGTAAACAC+TGG - chr5.4:11452721-11452740 None:intergenic 35.0%
ACCATTTACCTGAAACTAGA+GGG + chr5.4:11453162-11453181 MS.gene010438:CDS 35.0%
ACTATGTTTCGCTGTTGTAA+CGG + chr5.4:11448579-11448598 MS.gene010438:intron 35.0%
AGAAGAACCTAGAAAGAAGA+AGG - chr5.4:11448251-11448270 None:intergenic 35.0%
AGAAGGAATCTGTCATATCT+TGG + chr5.4:11453711-11453730 MS.gene010438:CDS 35.0%
AGAAGGTTATCCAGAAAAGA+GGG + chr5.4:11449568-11449587 MS.gene010438:intron 35.0%
AGAGTGAAATTAGTTAGAGG+AGG + chr5.4:11448476-11448495 MS.gene010438:intron 35.0%
AGATCTGTGATGTACAATCA+TGG + chr5.4:11448974-11448993 MS.gene010438:intron 35.0%
AGCGTTAAAACGGCAAATAA+CGG + chr5.4:11448700-11448719 MS.gene010438:intron 35.0%
AGCTCCTAATTAGTAATAGC+AGG - chr5.4:11452689-11452708 None:intergenic 35.0%
ATACTGCAATATGTGGTGTA+TGG + chr5.4:11452478-11452497 MS.gene010438:intron 35.0%
ATGGTTGGACTGAAATGTAA+TGG + chr5.4:11449425-11449444 MS.gene010438:intron 35.0%
CATCATCGAAAAAGGGTAAA+CGG + chr5.4:11453830-11453849 MS.gene010438:CDS 35.0%
CATGGAGAAGTTAAATGAGA+AGG + chr5.4:11449551-11449570 MS.gene010438:intron 35.0%
CTAACCTCAAAATCAGTGAT+TGG - chr5.4:11451805-11451824 None:intergenic 35.0%
CTTGATCATATGCATTTGAC+CGG + chr5.4:11453979-11453998 MS.gene010438:CDS 35.0%
CTTTCTTCTTAAGCTTTCCT+TGG - chr5.4:11447689-11447708 None:intergenic 35.0%
GAATGGTTTCAACGATTTGT+TGG + chr5.4:11447551-11447570 MS.gene010438:CDS 35.0%
GATCTGTGATGTACAATCAT+GGG + chr5.4:11448975-11448994 MS.gene010438:intron 35.0%
GATGAACTCTAAACTCAATG+AGG - chr5.4:11452558-11452577 None:intergenic 35.0%
GATTCAATTGAGCAAAGTGA+TGG - chr5.4:11450191-11450210 None:intergenic 35.0%
GGAATTTGAACTTCTCAACA+AGG - chr5.4:11450062-11450081 None:intergenic 35.0%
GGTCAAATGCATATGATCAA+GGG - chr5.4:11453980-11453999 None:intergenic 35.0%
GGTGATTAAATCGTTGTCAA+TGG - chr5.4:11450971-11450990 None:intergenic 35.0%
GTATCTTATCCAAACCAATC+TGG - chr5.4:11448895-11448914 None:intergenic 35.0%
GTGAAAACATCACAAGTCAT+TGG + chr5.4:11452367-11452386 MS.gene010438:intron 35.0%
GTGAGAGTGAAATTAGTTAG+AGG + chr5.4:11448473-11448492 MS.gene010438:intron 35.0%
TACCATTTACCTGAAACTAG+AGG + chr5.4:11453161-11453180 MS.gene010438:CDS 35.0%
TACGAGACTACTAACTAAAC+AGG - chr5.4:11449365-11449384 None:intergenic 35.0%
TATTTGAACACTGTGGATGT+CGG + chr5.4:11449920-11449939 MS.gene010438:CDS 35.0%
TCTTCTGCATCATCGAAAAA+GGG + chr5.4:11453823-11453842 MS.gene010438:CDS 35.0%
TGAGAAGTGGCAAAATATGA+AGG + chr5.4:11450732-11450751 MS.gene010438:CDS 35.0%
TGAGAATAGAAGGGATTTGA+TGG + chr5.4:11447749-11447768 MS.gene010438:CDS 35.0%
TGATTGTACATCACAGATCT+TGG - chr5.4:11448974-11448993 None:intergenic 35.0%
TGTTATATGGTTACCTAGGA+AGG - chr5.4:11453435-11453454 None:intergenic 35.0%
TTATAGGTTATCCCAACTTG+AGG + chr5.4:11453677-11453696 MS.gene010438:intron 35.0%
TTCAGTCCAACCATAACATA+AGG - chr5.4:11449419-11449438 None:intergenic 35.0%
TTCTATGCACAGATAGTGAA+AGG + chr5.4:11450649-11450668 MS.gene010438:intron 35.0%
TTCTTCTGCATCATCGAAAA+AGG + chr5.4:11453822-11453841 MS.gene010438:CDS 35.0%
TTGTTGTAGCTGTGAAAGAA+TGG + chr5.4:11452630-11452649 MS.gene010438:CDS 35.0%
! ACTTCATTTTCCCTCTTTTC+TGG - chr5.4:11449581-11449600 None:intergenic 35.0%
! AGTTTAGAGTTCATCCTTTC+TGG + chr5.4:11452563-11452582 MS.gene010438:CDS 35.0%
! CAGTACTTTTGTATCCAGAA+AGG - chr5.4:11452580-11452599 None:intergenic 35.0%
! CATTGAAACTTTGGAAGCTT+TGG + chr5.4:11447509-11447528 MS.gene010438:CDS 35.0%
! CGTTCCTGTATTTAAAACCT+TGG + chr5.4:11448770-11448789 MS.gene010438:intron 35.0%
! CTTCTCATTTAACTTCTCCA+TGG - chr5.4:11449553-11449572 None:intergenic 35.0%
! GAGATGAGATGAGATTTTAG+AGG - chr5.4:11448418-11448437 None:intergenic 35.0%
! GTGTAGAGTCTCATGTTTTA+AGG + chr5.4:11449008-11449027 MS.gene010438:intron 35.0%
! TAAAGAGTTCCAGATTGGTT+TGG + chr5.4:11448883-11448902 MS.gene010438:intron 35.0%
! TGAAACCAGCATTGAAACTT+TGG + chr5.4:11447500-11447519 MS.gene010438:CDS 35.0%
! TGCACAATGTTCTTCAAGTT+GGG - chr5.4:11449895-11449914 None:intergenic 35.0%
! TTAAATAACGGTAACGGTTG+CGG + chr5.4:11448033-11448052 MS.gene010438:intron 35.0%
! TTCTTGCATGATTTTCATCG+GGG - chr5.4:11453606-11453625 None:intergenic 35.0%
! TTTTGCATTCATGCTTCTTG+TGG - chr5.4:11452324-11452343 None:intergenic 35.0%
! TTTTTAATCTGTGCAGCCAA+AGG + chr5.4:11452829-11452848 MS.gene010438:intron 35.0%
!! AAAAGAGTGCTTCATGGATA+CGG + chr5.4:11450849-11450868 MS.gene010438:CDS 35.0%
!! CAATGAAAAAGAGTGCTTCA+TGG + chr5.4:11450843-11450862 MS.gene010438:CDS 35.0%
!! CATTGATGATGATGAAGATG+AGG - chr5.4:11453794-11453813 None:intergenic 35.0%
!! GATGAGATGAGATTTTAGAG+GGG - chr5.4:11448416-11448435 None:intergenic 35.0%
!!! ACAGCCATTCTTGTTTTGTA+TGG + chr5.4:11453409-11453428 MS.gene010438:CDS 35.0%
!!! AGATTTTTAAGTTGCATGGG+AGG + chr5.4:11451736-11451755 MS.gene010438:CDS 35.0%
!!! AGGATGAAATGTTTTTGGTG+TGG - chr5.4:11452669-11452688 None:intergenic 35.0%
!!! AGGGTTGCTTTTAGAAGATT+TGG + chr5.4:11450114-11450133 MS.gene010438:CDS 35.0%
!!! ATAAAATTTTGGTGACGTCG+AGG + chr5.4:11450094-11450113 MS.gene010438:CDS 35.0%
!!! TAAAATTTTGGTGACGTCGA+GGG + chr5.4:11450095-11450114 MS.gene010438:CDS 35.0%
!!! TTTGATGGAGGTTTTGACTA+AGG + chr5.4:11447764-11447783 MS.gene010438:CDS 35.0%
AAAGCAAGAAGCTTACTCGA+TGG + chr5.4:11447640-11447659 MS.gene010438:CDS 40.0%
AACCTAGAAAGAAGAAGGTG+AGG - chr5.4:11448246-11448265 None:intergenic 40.0%
AATATTTCAATCACGGAGGG+GGG + chr5.4:11451369-11451388 MS.gene010438:intron 40.0%
AATGAGGCCAGCTGAATTAA+CGG - chr5.4:11452542-11452561 None:intergenic 40.0%
ACAGATAGTGAAAGGCTGTA+AGG + chr5.4:11450657-11450676 MS.gene010438:intron 40.0%
ACTGCATGATTACGATCAAG+TGG - chr5.4:11450159-11450178 None:intergenic 40.0%
AGCTTCCAAAGTTTCAATGC+TGG - chr5.4:11447508-11447527 None:intergenic 40.0%
ATCTTGGCTCATATGTGGTT+AGG + chr5.4:11453727-11453746 MS.gene010438:CDS 40.0%
ATGTCTTGAGTGTCTTGACT+CGG + chr5.4:11452889-11452908 MS.gene010438:CDS 40.0%
ATTTGAACACTGTGGATGTC+GGG + chr5.4:11449921-11449940 MS.gene010438:CDS 40.0%
CAAAATCAGTGATTGGCAGA+TGG - chr5.4:11451798-11451817 None:intergenic 40.0%
CAGACACTATTTGAACACTG+TGG + chr5.4:11449913-11449932 MS.gene010438:CDS 40.0%
CAGATAGTGAAAGGCTGTAA+GGG + chr5.4:11450658-11450677 MS.gene010438:intron 40.0%
CAGATTCCTTCTTCAACTTC+TGG - chr5.4:11453703-11453722 None:intergenic 40.0%
CATGCATTATCTCATGAGCT+AGG - chr5.4:11453551-11453570 None:intergenic 40.0%
CCATTCATTTCTGCAACCAA+AGG - chr5.4:11447537-11447556 None:intergenic 40.0%
CCTTTGGTTGCAGAAATGAA+TGG + chr5.4:11447534-11447553 MS.gene010438:CDS 40.0%
CGGTCAAATGCATATGATCA+AGG - chr5.4:11453981-11454000 None:intergenic 40.0%
CTCATGAGATAATGCATGCA+TGG + chr5.4:11453553-11453572 MS.gene010438:CDS 40.0%
CTGCACAATGTTCTTCAAGT+TGG - chr5.4:11449896-11449915 None:intergenic 40.0%
CTGCATAACTCAGAAGAAGA+TGG + chr5.4:11450931-11450950 MS.gene010438:CDS 40.0%
CTTTCACAGCTACAACAACT+TGG - chr5.4:11452628-11452647 None:intergenic 40.0%
GAATAGAAGGGATTTGATGG+AGG + chr5.4:11447752-11447771 MS.gene010438:CDS 40.0%
GAGAAGGTTATCCAGAAAAG+AGG + chr5.4:11449567-11449586 MS.gene010438:intron 40.0%
GGAAAGACAAGCACTAAAAG+AGG + chr5.4:11453015-11453034 MS.gene010438:CDS 40.0%
GGAATCTGTGTATGAGAGTT+TGG - chr5.4:11448351-11448370 None:intergenic 40.0%
GTAAGGACTATTGCTAGACA+TGG - chr5.4:11452001-11452020 None:intergenic 40.0%
GTCATATCTTGGCTCATATG+TGG + chr5.4:11453722-11453741 MS.gene010438:CDS 40.0%
GTCTGAATCAGTTAGTCGAA+TGG - chr5.4:11451516-11451535 None:intergenic 40.0%
TCAGGCAATACTGCAATATG+TGG + chr5.4:11452471-11452490 MS.gene010438:intron 40.0%
TCATAGGTCTCAGAAGAAGA+TGG + chr5.4:11451007-11451026 MS.gene010438:CDS 40.0%
TCTAGTATATCTCGGTAGAG+AGG - chr5.4:11452941-11452960 None:intergenic 40.0%
TCTTGCAAACATCGCATCTT+GGG - chr5.4:11452053-11452072 None:intergenic 40.0%
TGATCTGAATCCATCTCCAT+AGG - chr5.4:11453920-11453939 None:intergenic 40.0%
TGGTTATCATGTCTGTGACT+CGG - chr5.4:11453357-11453376 None:intergenic 40.0%
TGTCTGGATAATTGGCAATG+AGG + chr5.4:11449466-11449485 MS.gene010438:intron 40.0%
TTACCATAAGTCCTGCTACA+GGG + chr5.4:11452017-11452036 MS.gene010438:CDS 40.0%
TTAGGATCAGAGCTCTATTC+TGG + chr5.4:11453745-11453764 MS.gene010438:CDS 40.0%
TTCGATGATGCAGAAGAAGA+CGG - chr5.4:11453820-11453839 None:intergenic 40.0%
TTCTTGCAAACATCGCATCT+TGG - chr5.4:11452054-11452073 None:intergenic 40.0%
TTGTAGCTGTGAAAGAATGG+AGG + chr5.4:11452633-11452652 MS.gene010438:CDS 40.0%
! CGTTAAGGTTTTCACGGTTT+CGG + chr5.4:11448065-11448084 MS.gene010438:intron 40.0%
! GAGTTGATTGTGTCTTTGTG+TGG - chr5.4:11448372-11448391 None:intergenic 40.0%
! GATGATGATGAAGATGAGGA+CGG - chr5.4:11453790-11453809 None:intergenic 40.0%
! TACGTTCTTTTCTCCCTCTA+TGG - chr5.4:11453041-11453060 None:intergenic 40.0%
! TATGGAGATGGATTCAGATC+AGG + chr5.4:11453919-11453938 MS.gene010438:CDS 40.0%
! TGGCCTATACCGTTTTGTAA+CGG + chr5.4:11448732-11448751 MS.gene010438:intron 40.0%
! TGTCTTTCCACCAAAAGCAT+AGG - chr5.4:11453004-11453023 None:intergenic 40.0%
!! AAAGAGTGCTTCATGGATAC+GGG + chr5.4:11450850-11450869 MS.gene010438:CDS 40.0%
!! ATTGAAGAGAAAGCACCTCA+CGG - chr5.4:11450248-11450267 None:intergenic 40.0%
!! CAAGTTGGGAGTTTTTGAGA+CGG - chr5.4:11449881-11449900 None:intergenic 40.0%
!! TAAGCTTTCCTTGGTAACGT+GGG - chr5.4:11447680-11447699 None:intergenic 40.0%
!! TCAATGCTGGTTTCAAGTGT+GGG - chr5.4:11447495-11447514 None:intergenic 40.0%
!! TGCTCACTTTTCTTCCTTAC+TGG + chr5.4:11452402-11452421 MS.gene010438:intron 40.0%
!! TTAAGCTTTCCTTGGTAACG+TGG - chr5.4:11447681-11447700 None:intergenic 40.0%
!! TTCAATGCTGGTTTCAAGTG+TGG - chr5.4:11447496-11447515 None:intergenic 40.0%
!! TTGTTTTGTATGGCCTTCCT+AGG + chr5.4:11453419-11453438 MS.gene010438:CDS 40.0%
!!! GAGGTTTTGACTAAGGTGAA+TGG + chr5.4:11447771-11447790 MS.gene010438:CDS 40.0%
!!! GTGCTTGTTTTGACTGGTTT+GGG + chr5.4:11447939-11447958 MS.gene010438:CDS 40.0%
!!! GTTTCTGTGCTTGTTTTGAC+TGG + chr5.4:11447933-11447952 MS.gene010438:CDS 40.0%
!!! TCTGCCAATCACTGATTTTG+AGG + chr5.4:11451798-11451817 MS.gene010438:CDS 40.0%
!!! TGTGCTTGTTTTGACTGGTT+TGG + chr5.4:11447938-11447957 MS.gene010438:CDS 40.0%
AAAGAAGAAGGTGAGGTGAG+AGG - chr5.4:11448239-11448258 None:intergenic 45.0%
AACAAACTGTCACCACCGTA+GGG + chr5.4:11453201-11453220 MS.gene010438:intron 45.0%
AAGGTGAGGTGAGAGGAATT+GGG - chr5.4:11448232-11448251 None:intergenic 45.0%
AAGTGAAAACCTCGTAGCAG+GGG - chr5.4:11449103-11449122 None:intergenic 45.0%
AAGTGGATCCAACTCGAATG+GGG - chr5.4:11450142-11450161 None:intergenic 45.0%
ACAAGTGAAAACCTCGTAGC+AGG - chr5.4:11449105-11449124 None:intergenic 45.0%
ACCAGGCGGTACTTAAGTAT+GGG + chr5.4:11453944-11453963 MS.gene010438:CDS 45.0%
ACGGGTCAGTTTATAAGGCT+TGG - chr5.4:11453377-11453396 None:intergenic 45.0%
AGAAGACCAATTATAGGGGC+AGG + chr5.4:11453328-11453347 MS.gene010438:CDS 45.0%
AGATAATGCATGCATGGCTC+AGG + chr5.4:11453559-11453578 MS.gene010438:CDS 45.0%
AGCACTAAAAGAGGCCATAG+AGG + chr5.4:11453024-11453043 MS.gene010438:CDS 45.0%
ATATTTCAATCACGGAGGGG+GGG + chr5.4:11451370-11451389 MS.gene010438:intron 45.0%
ATGAGGCCAGCTGAATTAAC+GGG - chr5.4:11452541-11452560 None:intergenic 45.0%
ATGTACAATCATGGGCGTGA+AGG + chr5.4:11448983-11449002 MS.gene010438:intron 45.0%
ATGTTTCGCTGTTGTAACGG+TGG + chr5.4:11448582-11448601 MS.gene010438:intron 45.0%
ATTCAGATCAGGTTACCAGG+CGG + chr5.4:11453930-11453949 MS.gene010438:CDS 45.0%
ATTTGGTACCCCATTCGAGT+TGG + chr5.4:11450131-11450150 MS.gene010438:CDS 45.0%
CAACTGACTAGCAACCTGTT+TGG + chr5.4:11450398-11450417 MS.gene010438:intron 45.0%
CAAGTGAAAACCTCGTAGCA+GGG - chr5.4:11449104-11449123 None:intergenic 45.0%
CAAGTGGATCCAACTCGAAT+GGG - chr5.4:11450143-11450162 None:intergenic 45.0%
CACCTCACCTTCTTCTTTCT+AGG + chr5.4:11448241-11448260 MS.gene010438:intron 45.0%
CAGAAGACCCAATCGGTTAA+TGG - chr5.4:11449974-11449993 None:intergenic 45.0%
CAGAGCTCTATTCTGGATCT+GGG + chr5.4:11453752-11453771 MS.gene010438:CDS 45.0%
CATCGACGGGTCAGTTTATA+AGG - chr5.4:11453382-11453401 None:intergenic 45.0%
CGATATCGGCCGTTACAAAA+CGG - chr5.4:11448744-11448763 None:intergenic 45.0%
CTCAGAAGAAGATGGTGCAA+AGG + chr5.4:11450939-11450958 MS.gene010438:CDS 45.0%
CTGTAGCAGGACTTATGGTA+AGG - chr5.4:11452018-11452037 None:intergenic 45.0%
CTTACCATAAGTCCTGCTAC+AGG + chr5.4:11452016-11452035 MS.gene010438:CDS 45.0%
GAAAGTCTTCTAGATGGCCA+TGG + chr5.4:11449533-11449552 MS.gene010438:intron 45.0%
GACGATGCCATTAACCGATT+GGG + chr5.4:11449964-11449983 MS.gene010438:CDS 45.0%
GACTATTTCCTGAAGACCAG+AGG + chr5.4:11450872-11450891 MS.gene010438:CDS 45.0%
GATCCATGTTGTTGCAACAG+GGG - chr5.4:11451576-11451595 None:intergenic 45.0%
GATGTTTGGCCTAACTCAGA+AGG + chr5.4:11450036-11450055 MS.gene010438:CDS 45.0%
GCAATAACCTGAATCACCAG+CGG - chr5.4:11450688-11450707 None:intergenic 45.0%
GCACTAAAAGAGGCCATAGA+GGG + chr5.4:11453025-11453044 MS.gene010438:CDS 45.0%
GGATAAGATACGGCTCGATA+AGG + chr5.4:11448904-11448923 MS.gene010438:intron 45.0%
GGATCCATGTTGTTGCAACA+GGG - chr5.4:11451577-11451596 None:intergenic 45.0%
GTATATCTCGGTAGAGAGGT+TGG - chr5.4:11452937-11452956 None:intergenic 45.0%
GTGCTTGTAACAAGTTCGTG+AGG + chr5.4:11449152-11449171 MS.gene010438:intron 45.0%
TACCAGGCGGTACTTAAGTA+TGG + chr5.4:11453943-11453962 MS.gene010438:CDS 45.0%
TCAACAAGGCCTTCTGAGTT+AGG - chr5.4:11450048-11450067 None:intergenic 45.0%
TCAACTTCTGGCCTCAAGTT+GGG - chr5.4:11453691-11453710 None:intergenic 45.0%
TCAAGTGGATCCAACTCGAA+TGG - chr5.4:11450144-11450163 None:intergenic 45.0%
TCACGGACAAGATTCCTATC+AGG - chr5.4:11450231-11450250 None:intergenic 45.0%
TCAGAGCTCTATTCTGGATC+TGG + chr5.4:11453751-11453770 MS.gene010438:CDS 45.0%
TCATCCATTCCCATGCATAC+AGG - chr5.4:11447873-11447892 None:intergenic 45.0%
TCGGTTAATGGCATCGTCAT+CGG - chr5.4:11449962-11449981 None:intergenic 45.0%
TCTGAGTTATGCAGTTCTGC+CGG - chr5.4:11450925-11450944 None:intergenic 45.0%
TCTTGCTAAGAAGCTCTGCT+GGG + chr5.4:11447980-11447999 MS.gene010438:CDS 45.0%
TGACGATGCCATTAACCGAT+TGG + chr5.4:11449963-11449982 MS.gene010438:CDS 45.0%
TGATAGGAATCTTGTCCGTG+AGG + chr5.4:11450230-11450249 MS.gene010438:CDS 45.0%
TGCCTCCTCTTCAATCTTCA+TGG - chr5.4:11448502-11448521 None:intergenic 45.0%
TGCTGGGATCCACAAATCAA+AGG + chr5.4:11447996-11448015 MS.gene010438:CDS 45.0%
TGGATCCATGTTGTTGCAAC+AGG - chr5.4:11451578-11451597 None:intergenic 45.0%
TGGATTCAGATCAGGTTACC+AGG + chr5.4:11453927-11453946 MS.gene010438:CDS 45.0%
TGTACAATCATGGGCGTGAA+GGG + chr5.4:11448984-11449003 MS.gene010438:intron 45.0%
TGTTTCGCTGTTGTAACGGT+GGG + chr5.4:11448583-11448602 MS.gene010438:intron 45.0%
TTACCCCTGTTGCAACAACA+TGG + chr5.4:11451570-11451589 MS.gene010438:intron 45.0%
TTCAACTTCTGGCCTCAAGT+TGG - chr5.4:11453692-11453711 None:intergenic 45.0%
TTGAGGCCAGAAGTTGAAGA+AGG + chr5.4:11453694-11453713 MS.gene010438:CDS 45.0%
TTGGAAGCAAGGAATCCCTA+CGG - chr5.4:11453219-11453238 None:intergenic 45.0%
! CTGGTGATTCAGGTTATTGC+TGG + chr5.4:11450688-11450707 MS.gene010438:CDS 45.0%
! GCAAATAACGGTAACGGTGA+TGG + chr5.4:11448712-11448731 MS.gene010438:intron 45.0%
! GCAAGTTCCTATGCTTTTGG+TGG + chr5.4:11452994-11453013 MS.gene010438:CDS 45.0%
! GCCCTCTAGTTTCAGGTAAA+TGG - chr5.4:11453166-11453185 None:intergenic 45.0%
! GTGAGGTATCTGACTCAATC+TGG - chr5.4:11453894-11453913 None:intergenic 45.0%
! TTTGGAAGCTTTGGCTCCTT+TGG + chr5.4:11447518-11447537 MS.gene010438:CDS 45.0%
! TTTTGTAACGGCCGATATCG+CGG + chr5.4:11448744-11448763 MS.gene010438:intron 45.0%
!! ATGGCGGATCTATTAAGTGG+AGG + chr5.4:11447396-11447415 MS.gene010438:CDS 45.0%
!! CTATTAAGTGGAGGTGCTGT+TGG + chr5.4:11447405-11447424 MS.gene010438:CDS 45.0%
!! GTAAGCAGCCTTTTGAGAAG+TGG + chr5.4:11450719-11450738 MS.gene010438:CDS 45.0%
!! GTGTCTTGACTCGGCAATTA+TGG + chr5.4:11452898-11452917 MS.gene010438:CDS 45.0%
!! TCGTCATCGGTTTGAAACTC+AGG - chr5.4:11449949-11449968 None:intergenic 45.0%
!!! CTTGTTTTGACTGGTTTGGG+TGG + chr5.4:11447942-11447961 MS.gene010438:CDS 45.0%
!!! AATATAAAACTTTTTTTTTT+GGG + chr5.4:11452761-11452780 MS.gene010438:intron 5.0%
!!! TAATATAAAACTTTTTTTTT+TGG + chr5.4:11452760-11452779 MS.gene010438:intron 5.0%
ACCGATTGGGTCTTCTGTTG+AGG + chr5.4:11449977-11449996 MS.gene010438:CDS 50.0%
ACGGCTCGATAAGGTTGAGT+TGG + chr5.4:11448913-11448932 MS.gene010438:intron 50.0%
ACGGTGTTTCGAGGCTGTAA+CGG + chr5.4:11448640-11448659 MS.gene010438:intron 50.0%
AGAGCCTGTATGCATGGGAA+TGG + chr5.4:11447866-11447885 MS.gene010438:CDS 50.0%
AGATCAATGGGGGCAGTAAC+AGG - chr5.4:11450901-11450920 None:intergenic 50.0%
AGTGAAAACCTCGTAGCAGG+GGG - chr5.4:11449102-11449121 None:intergenic 50.0%
AGTTCTGCCGGCAGATCAAT+GGG - chr5.4:11450913-11450932 None:intergenic 50.0%
CAGATCCCCGTTAATTCAGC+TGG + chr5.4:11452532-11452551 MS.gene010438:intron 50.0%
CAGGAACGTTACCGCGATAT+CGG - chr5.4:11448758-11448777 None:intergenic 50.0%
CATGCATGGCTCAGGCTTAA+AGG + chr5.4:11453567-11453586 MS.gene010438:CDS 50.0%
CCTGAAGAGCCTGTATGCAT+GGG + chr5.4:11447861-11447880 MS.gene010438:CDS 50.0%
CCTTCTTTCCCACGTTACCA+AGG + chr5.4:11447669-11447688 MS.gene010438:CDS 50.0%
CGGACGTTGCGTACATATTG+CGG + chr5.4:11448095-11448114 MS.gene010438:intron 50.0%
CGGCCGTTACAAAACGGTAT+AGG - chr5.4:11448738-11448757 None:intergenic 50.0%
CGGCTCGATAAGGTTGAGTT+GGG + chr5.4:11448914-11448933 MS.gene010438:intron 50.0%
CGGTATCCTGCCCCTATAAT+TGG - chr5.4:11453337-11453356 None:intergenic 50.0%
CTCTTGCTAAGAAGCTCTGC+TGG + chr5.4:11447979-11447998 MS.gene010438:CDS 50.0%
CTGAATCCATCTCCATAGGC+TGG - chr5.4:11453916-11453935 None:intergenic 50.0%
GAACAAACTGTCACCACCGT+AGG + chr5.4:11453200-11453219 MS.gene010438:intron 50.0%
GAAGGTGAGGTGAGAGGAAT+TGG - chr5.4:11448233-11448252 None:intergenic 50.0%
GAATTGGGCGTAGTTGGGTT+AGG - chr5.4:11448217-11448236 None:intergenic 50.0%
GAGAGGAATTGGGCGTAGTT+GGG - chr5.4:11448222-11448241 None:intergenic 50.0%
GATGATGCAGAAGAAGACGG+AGG - chr5.4:11453817-11453836 None:intergenic 50.0%
GCAGAGCTTCTTAGCAAGAG+TGG - chr5.4:11447979-11447998 None:intergenic 50.0%
GCAGCACATACATGCCTGAT+AGG + chr5.4:11450214-11450233 MS.gene010438:CDS 50.0%
GCCTCAACAGAAGACCCAAT+CGG - chr5.4:11449981-11450000 None:intergenic 50.0%
GCTGTAACGGCGTTACGTAA+CGG + chr5.4:11448653-11448672 MS.gene010438:intron 50.0%
GGAGGCCATGAAGATTGAAG+AGG + chr5.4:11448494-11448513 MS.gene010438:intron 50.0%
GGCCATGAAGATTGAAGAGG+AGG + chr5.4:11448497-11448516 MS.gene010438:intron 50.0%
GGTCTTCTGTTGAGGCAAGT+TGG + chr5.4:11449985-11450004 MS.gene010438:CDS 50.0%
TCAGATACCTCACCAGCCTA+TGG + chr5.4:11453901-11453920 MS.gene010438:CDS 50.0%
TCCTGAAGAGCCTGTATGCA+TGG + chr5.4:11447860-11447879 MS.gene010438:CDS 50.0%
TCTCCCTGTAGCAGGACTTA+TGG - chr5.4:11452023-11452042 None:intergenic 50.0%
TGAGAGGAATTGGGCGTAGT+TGG - chr5.4:11448223-11448242 None:intergenic 50.0%
TGAGGCCAGCTGAATTAACG+GGG - chr5.4:11452540-11452559 None:intergenic 50.0%
TGATTGGCAGATGGCAAGCA+TGG - chr5.4:11451789-11451808 None:intergenic 50.0%
TGCAATGCCGAGATTTGCCA+TGG + chr5.4:11451712-11451731 MS.gene010438:CDS 50.0%
TGCCCAACTCATGAGCTTGA+CGG + chr5.4:11452598-11452617 MS.gene010438:CDS 50.0%
TGCCGTCAAGCTCATGAGTT+GGG - chr5.4:11452603-11452622 None:intergenic 50.0%
TTCACGGTTTCGGACTGTCA+CGG + chr5.4:11448075-11448094 MS.gene010438:intron 50.0%
! AAGCAGAGCCCTCTAGTTTC+AGG - chr5.4:11453173-11453192 None:intergenic 50.0%
! ACAGGAATCCTCTGGTCTTC+AGG - chr5.4:11450883-11450902 None:intergenic 50.0%
! CGGTCGCGTTAAGGTTTTCA+CGG + chr5.4:11448059-11448078 MS.gene010438:intron 50.0%
! GGGGCAAGTTCCTATGCTTT+TGG + chr5.4:11452991-11453010 MS.gene010438:CDS 50.0%
! TGTTGTAACGGTGGGTTTCG+CGG + chr5.4:11448591-11448610 MS.gene010438:intron 50.0%
!! CCTTGGTAACGTGGGAAAGA+AGG - chr5.4:11447672-11447691 None:intergenic 50.0%
!! TAAGTTGCATGGGAGGTGTC+TGG + chr5.4:11451743-11451762 MS.gene010438:CDS 50.0%
!! TTAAGTGGAGGTGCTGTTGG+AGG + chr5.4:11447408-11447427 MS.gene010438:CDS 50.0%
!! TTGACTGGTTTGGGTGGATC+TGG + chr5.4:11447948-11447967 MS.gene010438:CDS 50.0%
ACCTCACCAGCCTATGGAGA+TGG + chr5.4:11453907-11453926 MS.gene010438:CDS 55.0%
CAAGCATGGCAGACGAAGCA+TGG - chr5.4:11451775-11451794 None:intergenic 55.0%
CACAAGACTAGCGCCCTGTT+TGG - chr5.4:11449332-11449351 None:intergenic 55.0%
CAGTTCTGCCGGCAGATCAA+TGG - chr5.4:11450914-11450933 None:intergenic 55.0%
CCCATGCATACAGGCTCTTC+AGG - chr5.4:11447864-11447883 None:intergenic 55.0%
CGTACATATTGCGGTCGTCG+CGG + chr5.4:11448104-11448123 MS.gene010438:intron 55.0%
GAAGCAAGGAATCCCTACGG+TGG - chr5.4:11453216-11453235 None:intergenic 55.0%
GCAGGGGGCTCAACAAATCT+TGG - chr5.4:11449087-11449106 None:intergenic 55.0%
GGGCAGTAACAGGAATCCTC+TGG - chr5.4:11450891-11450910 None:intergenic 55.0%
GTGCCGTCAAGCTCATGAGT+TGG - chr5.4:11452604-11452623 None:intergenic 55.0%
GTTCTGCCGGCAGATCAATG+GGG - chr5.4:11450912-11450931 None:intergenic 55.0%
TACTGCCCCCATTGATCTGC+CGG + chr5.4:11450903-11450922 MS.gene010438:CDS 55.0%
TCCATCTCCATAGGCTGGTG+AGG - chr5.4:11453911-11453930 None:intergenic 55.0%
TTCTGCCGGCAGATCAATGG+GGG - chr5.4:11450911-11450930 None:intergenic 55.0%
! AACGGTAACGGTTGCGGTCA+CGG + chr5.4:11448039-11448058 MS.gene010438:intron 55.0%
! GCCCATACTTAAGTACCGCC+TGG - chr5.4:11453948-11453967 None:intergenic 55.0%
! GGCGAGTTTTGCGGTCGTAA+CGG + chr5.4:11448621-11448640 MS.gene010438:intron 55.0%
! GGCGTAGTTGGGTTAGGTGA+GGG - chr5.4:11448211-11448230 None:intergenic 55.0%
! GGCTGTAACGGCGAGTTTTG+CGG + chr5.4:11448612-11448631 MS.gene010438:intron 55.0%
! TGGCTGTCACTTCGCATCGA+CGG - chr5.4:11453396-11453415 None:intergenic 55.0%
AGGCTGTAAGGGTTCACCGC+TGG + chr5.4:11450669-11450688 MS.gene010438:CDS 60.0%
GCATGGCAGACGAAGCATGG+TGG - chr5.4:11451772-11451791 None:intergenic 60.0%
GCGATGCTTCTCCCTGTAGC+AGG - chr5.4:11452031-11452050 None:intergenic 60.0%
GCGGTCGTAACGGTGTTTCG+AGG + chr5.4:11448631-11448650 MS.gene010438:intron 60.0%
GGGTTCACCGCTGGTGATTC+AGG + chr5.4:11450678-11450697 MS.gene010438:CDS 60.0%
TTGCGGTCACGGTCGCGTTA+AGG + chr5.4:11448050-11448069 MS.gene010438:intron 60.0%
TTGTTGAGCCCCCTGCTACG+AGG + chr5.4:11449091-11449110 MS.gene010438:intron 60.0%
! GGCTGTCACTTCGCATCGAC+GGG - chr5.4:11453395-11453414 None:intergenic 60.0%
! GGGCGTAGTTGGGTTAGGTG+AGG - chr5.4:11448212-11448231 None:intergenic 60.0%
! GGTGGGTTTCGCGGCTGTAA+CGG + chr5.4:11448600-11448619 MS.gene010438:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 11447396 11454017 11447396 ID=MS.gene010438
chr5.4 mRNA 11447396 11454017 11447396 ID=MS.gene010438.t1;Parent=MS.gene010438
chr5.4 exon 11447396 11448017 11447396 ID=MS.gene010438.t1.exon1;Parent=MS.gene010438.t1
chr5.4 CDS 11447396 11448017 11447396 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11449848 11450251 11449848 ID=MS.gene010438.t1.exon2;Parent=MS.gene010438.t1
chr5.4 CDS 11449848 11450251 11449848 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11450661 11451028 11450661 ID=MS.gene010438.t1.exon3;Parent=MS.gene010438.t1
chr5.4 CDS 11450661 11451028 11450661 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11451678 11451819 11451678 ID=MS.gene010438.t1.exon4;Parent=MS.gene010438.t1
chr5.4 CDS 11451678 11451819 11451678 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11451994 11452077 11451994 ID=MS.gene010438.t1.exon5;Parent=MS.gene010438.t1
chr5.4 CDS 11451994 11452077 11451994 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11452535 11452654 11452535 ID=MS.gene010438.t1.exon6;Parent=MS.gene010438.t1
chr5.4 CDS 11452535 11452654 11452535 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11452845 11453057 11452845 ID=MS.gene010438.t1.exon7;Parent=MS.gene010438.t1
chr5.4 CDS 11452845 11453057 11452845 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11453155 11453217 11453155 ID=MS.gene010438.t1.exon8;Parent=MS.gene010438.t1
chr5.4 CDS 11453155 11453217 11453155 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11453322 11453440 11453322 ID=MS.gene010438.t1.exon9;Parent=MS.gene010438.t1
chr5.4 CDS 11453322 11453440 11453322 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11453530 11453588 11453530 ID=MS.gene010438.t1.exon10;Parent=MS.gene010438.t1
chr5.4 CDS 11453530 11453588 11453530 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
chr5.4 exon 11453683 11454017 11453683 ID=MS.gene010438.t1.exon11;Parent=MS.gene010438.t1
chr5.4 CDS 11453683 11454017 11453683 ID=cds.MS.gene010438.t1;Parent=MS.gene010438.t1
Gene Sequence

>MS.gene010438

ATGGCGGATCTATTAAGTGGAGGTGCTGTTGGAGGTGTGATGAGTGAAATATTGAAACAAGCTCTTCAAACAATCAAAAATGGTCGTGAATTCGGTCCCACACTTGAAACCAGCATTGAAACTTTGGAAGCTTTGGCTCCTTTGGTTGCAGAAATGAATGGTTTCAACGATTTGTTGGGTCGACCAAGAGAAGAGATAGAGAGATTAGAGAAACACATAAGAGAAGGTAAAGAGCTTGTGCAAAAAAGCAAGAAGCTTACTCGATGGAACTTTCCTTCTTTCCCACGTTACCAAGGAAAGCTTAAGAAGAAAGATGAAGGGCTAAAGAGACATTTGAATGTTAATGTTCAAGTTGAGAATAGAAGGGATTTGATGGAGGTTTTGACTAAGGTGAATGGAATTCTTGAGATTTTGATGAAAATGGATCAGTTTGATAGGAATCAAATAAGGGGTTTGTGTGGTGCTCCTGAAGAGCCTGTATGCATGGGAATGGATGAACCTTTGAATAAGTTGAAGATTGAATTGATGAAAGATGGTGTTTCTGTGCTTGTTTTGACTGGTTTGGGTGGATCTGGTAAAACCACTCTTGCTAAGAAGCTCTGCTGGGATCCACAAATCAAAGGTAGTAATCAAGGTTTTAAATAACGGTAACGGTTGCGGTCACGGTCGCGTTAAGGTTTTCACGGTTTCGGACTGTCACGGACGTTGCGTACATATTGCGGTCGTCGCGGTGTGAATTAATCACAATGTTGCACAAAACCACAAATCTTGTTAAAAGTCAATAAGTTAGTGACATTCATTAGTTTGGGATTCCCTCACCTAACCCAACTACGCCCAATTCCTCTCACCTCACCTTCTTCTTTCTAGGTTCTTCTTCTTTCTCACTTCTTTCTCACAAAACAGAAGAAAGCAGCCACATATTGACACAGAATGAATATTTTATCTGTAAGGTCCAAACTCTCATACACAGATTCCACACAAAGACACAATCAACTCAACTTAAAGTCCCATTTTTTTCCCCTCTAAAATCTCATCTCATCTCTGATACAAATTTACAGAACAACACCCAAATTAAGAGTGAGAGTGAAATTAGTTAGAGGAGGCCATGAAGATTGAAGAGGAGGCAATGAAAATTGAATAATGAAGCTAAAGAAAAGAAACAGATGAAGTTTTTGCATCCGTAACTATGTTTCGCTGTTGTAACGGTGGGTTTCGCGGCTGTAACGGCGAGTTTTGCGGTCGTAACGGTGTTTCGAGGCTGTAACGGCGTTACGTAACGGCGTTTCAGTGTGATTTTTCTTCTCAGCGTTAAAACGGCAAATAACGGTAACGGTGATGGCCTATACCGTTTTGTAACGGCCGATATCGCGGTAACGTTCCTGTATTTAAAACCTTGGTAGTAATAGTATTAGTAACTAATTGCTTTTTTTACTAAATTATTACTACTGTTTTAGGGTCTGTTTTGATTGAATATTTTAAACTAATGTTAAAGAGTTCCAGATTGGTTTGGATAAGATACGGCTCGATAAGGTTGAGTTGGGCCCAACCCAAATTCTAATATGTATTAGAGTATATCCAAGATCTGTGATGTACAATCATGGGCGTGAAGGGTGTGTAGAGTCTCATGTTTTAAGGTTTAGATAAGTCTAATCCAAATTTTAATATGGTATCAGACTATCAGAGTCTATCCAAGATTTGTTGAGCCCCCTGCTACGAGGTTTTCACTTGTATGTTTGTTTTAGAGAGCTTACAGAAAGTGCTTGTAACAAGTTCGTGAGGCACTTTTAGTTTATTTACATAAGCTGTCTATAATAGCTTATAACTCATATGGAAATGGTTTGACTTTATTTTATCTTTTGTTATAGAAATAGCTTATACATAAGTACTTGTATGATTAACGCATATGCTATAAATGTTTAATTAAGTTGTTTGTCCAAACAGGGCGCTAGTCTTGTGAAATCACTTGCCTGTTTAGTTAGTAGTCTCGTATGACATGCATTTAATTTAAAATAGTAACAAACCTTATGTTATGGTTGGACTGAAATGTAATGGAATTGCATTTGTTTTCATTGTCTGGATAATTGGCAATGAGGTTATTTTTTTCAATTAAGATATATATGTGGTCAATCACTTATAGGAAAGTCTTCTAGATGGCCATGGAGAAGTTAAATGAGAAGGTTATCCAGAAAAGAGGGAAAATGAAGTAGTTGAATTGAACTTATTTAAAGCTGTTATTCTGTATAGTCTAATTGAGATTGAATGGAATGGATATTTATGTAGTTCACCCTATCATCTCTTTTCTACTCTAATTTTGGGTGTATGAGTCTCATCTCAATTGACATTCAATCATAGAAATATCCTAAAAAATAATTTCATTTCATTGCACTTCATTTTGCTTCATTTCAGTGCAATCCATTCTTCTTGATTTAGAAAGCTATTTTGTTTTGAATAGGCAAGTTTGGTGAAAATATCTTCTTTGTCACCGTCTCAAAAACTCCCAACTTGAAGAACATTGTGCAGACACTATTTGAACACTGTGGATGTCGGGTTCCTGAGTTTCAAACCGATGACGATGCCATTAACCGATTGGGTCTTCTGTTGAGGCAAGTTGGTAGAAATCCAATACTATTAGTCTTGGATGATGTTTGGCCTAACTCAGAAGGCCTTGTTGAGAAGTTCAAATTCCAAATGTCAGATTATAAAATTTTGGTGACGTCGAGGGTTGCTTTTAGAAGATTTGGTACCCCATTCGAGTTGGATCCACTTGATCGTAATCATGCAGTGTCTCTATTCCATCACTTTGCTCAATTGAATCACAGCAGCACATACATGCCTGATAGGAATCTTGTCCGTGAGGTGCTTTCTCTTCAATCGAACTAAATAGACATGATTATATGCGACAAACTGATACAAAATTATGTTTCTTTGTTATATTAAATCTTCTAATATGGGATATAAACTAAGTATTTATGAATAAAACCCTGATTAGTTTTCAAAGTTGTCAACTGACTAGCAACCTGTTTGGATAAACAGCTTAATTAAGAGCTTAAAGCATAAATGCTTATCGTATAAGTACTTTGGTATAAGCTATTTCTATAATAAAAGACAACGAAGTCAAATTGTTTTCATATAATTGCTACAATTTGTTTTGATAGTCTCTCACAAGTGTGTATACCAGTAGATAAACTCAAATAAGCCAATTCAAACAGTCCATAGTTAGTATTGCATACTAGTTATTACTCACTGATTTTGCTTCTATGCACAGATAGTGAAAGGCTGTAAGGGTTCACCGCTGGTGATTCAGGTTATTGCTGGATCACTATGTAAGCAGCCTTTTGAGAAGTGGCAAAATATGAAGGAACGTTTAAAGAGTAAAGCCGTTCTTGAGTCTAATATCACTGACTTGCTTTGTTACCTTCAACAAAGTTTGGATATATCGGACGATATCAATGAAAAAGAGTGCTTCATGGATACGGGACTATTTCCTGAAGACCAGAGGATTCCTGTTACTGCCCCCATTGATCTGCCGGCAGAACTGCATAACTCAGAAGAAGATGGTGCAAAGGCAATCGCCATTGACAACGATTTAATCACCAGAAATTTGATTAATGTCATAGGTCTCAGAAGAAGATGGTGCAAAGGCAATCGCCATTGACAACGATTTAATCACCAGAAATTTGATTAATGTCATAGGTTCAAGGTAAACAGTGTCACTTATAAAGCTTGTACTCATACCACTTCAAGAAAGATGTACTTTGAAATGCATTCTCTCATGACATGTGATTTAAACAATTTGTAAATAAAGAAGTAAAGAATGCATGGATTTCGTTTTGTCGTTATAAAGCAATGAAGTAAAACTATTCTATCAAATAGATTAGTTTCTCTCGATTTTTACGTATTTCTAAATTTTGCTGATTCACGGAAAATTTTGCTGCTTTTTAAACAATTAATCAATGAAATGAAACTTGATGAAAATATTTCAATCACGGAGGGGGGGTCTTATGTGTTACTTTAGTTTCCATATAGATATCATATTCTTAAGTTTCCATTGTATTTGTAAGTTAGGACTTACGATTATACATCTATCCAAAATGAATTAAAAAACTTGATTGTTAGGCCATTCGACTAACTGATTCAGACTAATGTATGGTAATCATTCTTGTCTTTGATGTATTTACCCCTGTTGCAACAACATGGATCCATATAGTAGACATCTTTGGAATTCTAGTTTTATATTTTCATGGATATTTTTTTCCTTACTAAAAATGAACCATTGACGTAGTTCTGAAAAATTTGTATACAAAATCTGTGCGGGATGCAATGCCGAGATTTGCCATGGAAGATTTTTAAGTTGCATGGGAGGTGTCTGGCATCCACCATGCTTCGTCTGCCATGCTTGCCATCTGCCAATCACTGATTTTGAGGTTAGAATTTCTTTTTCTATGCTACTTGCTCGACAAAACTGAGTTTAATCAAAACAAGTTGAAACTTTATTCAAAAAATCATAAGTTAGTGTCGTCGAATTATTTCTGCTGTTTCTTTAGTCTATTACAATAGGATTATGAATAATACTTTGACATTCAGTCGTTCTATTACAGTTTTCCATGTCTAGCAATAGTCCTTACCATAAGTCCTGCTACAGGGAGAAGCATCGCCCAAGATGCGATGTTTGCAAGAATTTTGTAAGTATCTCAGCAGGAGTCTTTCACTTGCAGTAGTCAATAGTCGTTTTACTATCAAAATTTCCTCTTATCATGGACATGCATTTGAAATTTTGATACAAAGTACATATGCTTTGGCTAGTAATGATATTGAGCTATTCTTATTTATTAAAGAGGTCGGAATTCAGAACAATACTCGAATATGTTCTGTTGAACTGTTTTTGAGTCTTTATGAAAAATTGTGGGTCAGCTATATTCATGCAACCACAAGAAGCATGAATGCAAAAAAAAATATATCACAAGGGTATAAGTGAAAACATCACAAGTCATTGGGTTGAAATGTGATGCTCACTTTTCTTCCTTACTGGAAAAAAAAAAAAAAAAAAAGGTCTATCTTTTTAAATGAAAGAAATTTCAGGCAATACTGCAATATGTGGTGTATGGTGAATGACAAATTTTTATTCTTATATTATTGCAGATCCCCGTTAATTCAGCTGGCCTCATTGAGTTTAGAGTTCATCCTTTCTGGATACAAAAGTACTGCCCAACTCATGAGCTTGACGGCACTCCAAGTTGTTGTAGCTGTGAAAGAATGGAGGTCAGTTATATCCACACCAAAAACATTTCATCCTGCTATTACTAATTAGGAGCTATCAATGATCCAGTGTTTACCTTCTCAAATGTTTAGTCTTTTCCTATTATCTAATATAAAACTTTTTTTTTTGGGCTTTTAGCCCTCTTTGTAATAAAAATATATATTTATATGTGAAACTTTTTAATCTGTGCAGCCAAAGGATTCAAAATATCTTTTGCTTGATGATGGTCGAAAGCTATGTCTTGAGTGTCTTGACTCGGCAATTATGGATAATGATGAATGCCAACCTCTCTACCGAGATATACTAGAATTTTATGAAGGTTTAAATATGAAAATGGAGGGGCAAGTTCCTATGCTTTTGGTGGAAAGACAAGCACTAAAAGAGGCCATAGAGGGAGAAAAGAACGTATGTGTTAAAACTTTCATTTGCAGAGTATTGTTACTTCTGTCTTTTTGTTGTCCTAACTTCGGTTTGTTATTTTGCTTTTCATTATCGAACATAGGGTCATTACCATTTACCTGAAACTAGAGGGCTCTGCTTGTCAGAAGAACAAACTGTCACCACCGTAGGGATTCCTTGCTTCCAAATTCAAGTCTTTACACACTTTTAATTCGGATGTACAAGATTTGTGTGTTATATAACAGTTTGATATATTTAATGTAATACCAGATCTTAAGAAGACCAATTATAGGGGCAGGATACCGAGTCACAGACATGATAACCAAGCCTTATAAACTGACCCGTCGATGCGAAGTGACAGCCATTCTTGTTTTGTATGGCCTTCCTAGGTAACCATATAACATCTACTTTCACAATCTAGCGCTTGCAAATGACATTCACTGTATATAATTCAAGGATTTTATGATTATACTTATAGATTGTTGACAGGATCAATCCTAGCTCATGAGATAATGCATGCATGGCTCAGGCTTAAAGGTGTTTCATCTGTTCCCCGATGAAAATCATGCAAGAAATTTATATTTTGTTTTATGATGCTAAGGTAGACAAAATATATGGTTTTTTTTTATAGGTTATCCCAACTTGAGGCCAGAAGTTGAAGAAGGAATCTGTCATATCTTGGCTCATATGTGGTTAGGATCAGAGCTCTATTCTGGATCTGGGAGTAATGATGCACCGTCCTCATCTTCATCATCATCAATGCCTCCGTCTTCTTCTGCATCATCGAAAAAGGGTAAACGGACTGATTTTGAGAAGAAACTTTGCGAGTTTTTCAAAAACCAGATTGAGTCAGATACCTCACCAGCCTATGGAGATGGATTCAGATCAGGTTACCAGGCGGTACTTAAGTATGGGCTCGAAAGCACCCTTGATCATATGCATTTGACCGGAACTTTTCCATGTTGA
Protein sequence

>MS.gene010438.t1

MADLLSGGAVGGVMSEILKQALQTIKNGREFGPTLETSIETLEALAPLVAEMNGFNDLLGRPREEIERLEKHIREGKELVQKSKKLTRWNFPSFPRYQGKLKKKDEGLKRHLNVNVQVENRRDLMEVLTKVNGILEILMKMDQFDRNQIRGLCGAPEEPVCMGMDEPLNKLKIELMKDGVSVLVLTGLGGSGKTTLAKKLCWDPQIKGKFGENIFFVTVSKTPNLKNIVQTLFEHCGCRVPEFQTDDDAINRLGLLLRQVGRNPILLVLDDVWPNSEGLVEKFKFQMSDYKILVTSRVAFRRFGTPFELDPLDRNHAVSLFHHFAQLNHSSTYMPDRNLVREIVKGCKGSPLVIQVIAGSLCKQPFEKWQNMKERLKSKAVLESNITDLLCYLQQSLDISDDINEKECFMDTGLFPEDQRIPVTAPIDLPAELHNSEEDGAKAIAIDNDLITRNLINVIGLRRRCSEKFVYKICAGCNAEICHGRFLSCMGGVWHPPCFVCHACHLPITDFEFSMSSNSPYHKSCYREKHRPRCDVCKNFIPVNSAGLIEFRVHPFWIQKYCPTHELDGTPSCCSCERMEPKDSKYLLLDDGRKLCLECLDSAIMDNDECQPLYRDILEFYEGLNMKMEGQVPMLLVERQALKEAIEGEKNGHYHLPETRGLCLSEEQTVTTILRRPIIGAGYRVTDMITKPYKLTRRCEVTAILVLYGLPRLLTGSILAHEIMHAWLRLKGYPNLRPEVEEGICHILAHMWLGSELYSGSGSNDAPSSSSSSSMPPSSSASSKKGKRTDFEKKLCEFFKNQIESDTSPAYGDGFRSGYQAVLKYGLESTLDHMHLTGTFPC