Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010944.t1 | ABD32483.2 | 90.4 | 94 | 9 | 0 | 1 | 94 | 6 | 99 | 1.50E-43 | 185.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010944.t1 | Q8L3W1 | 40.0 | 80 | 48 | 0 | 13 | 92 | 6 | 85 | 2.4e-13 | 76.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010944.t1 | Q2HSK0 | 90.4 | 94 | 9 | 0 | 1 | 94 | 6 | 99 | 1.1e-43 | 185.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene010944.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010944.t1 | MTR_7g050710 | 89.474 | 95 | 10 | 0 | 1 | 95 | 1 | 95 | 8.00e-60 | 186 |
| MS.gene010944.t1 | MTR_7g050580 | 76.923 | 104 | 24 | 0 | 1 | 104 | 1 | 104 | 8.30e-55 | 173 |
| MS.gene010944.t1 | MTR_3g098790 | 73.404 | 94 | 25 | 0 | 1 | 94 | 1 | 94 | 6.22e-48 | 155 |
| MS.gene010944.t1 | MTR_7g050560 | 69.231 | 104 | 32 | 0 | 1 | 104 | 1 | 104 | 8.44e-47 | 152 |
| MS.gene010944.t1 | MTR_7g050640 | 59.615 | 104 | 42 | 0 | 1 | 104 | 1 | 104 | 1.05e-40 | 130 |
| MS.gene010944.t1 | MTR_7g050720 | 68.132 | 91 | 29 | 0 | 7 | 97 | 4 | 94 | 1.43e-39 | 134 |
| MS.gene010944.t1 | MTR_7g050590 | 77.143 | 70 | 16 | 0 | 28 | 97 | 1 | 70 | 9.89e-35 | 120 |
| MS.gene010944.t1 | MTR_3g061290 | 51.765 | 85 | 39 | 1 | 10 | 94 | 9 | 91 | 4.83e-25 | 93.6 |
| MS.gene010944.t1 | MTR_8g103940 | 44.318 | 88 | 49 | 0 | 11 | 98 | 37 | 124 | 6.74e-24 | 94.7 |
| MS.gene010944.t1 | MTR_3g061330 | 47.059 | 85 | 43 | 1 | 10 | 94 | 9 | 91 | 1.83e-22 | 88.2 |
| MS.gene010944.t1 | MTR_3g061320 | 49.398 | 83 | 40 | 1 | 10 | 92 | 9 | 89 | 2.57e-22 | 88.2 |
| MS.gene010944.t1 | MTR_3g061310 | 45.882 | 85 | 44 | 1 | 10 | 94 | 9 | 91 | 1.05e-21 | 86.7 |
| MS.gene010944.t1 | MTR_3g061340 | 46.429 | 84 | 43 | 1 | 10 | 93 | 9 | 90 | 2.13e-21 | 85.9 |
| MS.gene010944.t1 | MTR_3g061370 | 44.444 | 90 | 48 | 1 | 5 | 94 | 1 | 88 | 2.36e-21 | 85.9 |
| MS.gene010944.t1 | MTR_5g044670 | 43.750 | 80 | 45 | 0 | 13 | 92 | 16 | 95 | 1.70e-20 | 84.3 |
| MS.gene010944.t1 | MTR_3g061350 | 43.617 | 94 | 50 | 2 | 1 | 94 | 1 | 91 | 8.20e-20 | 81.6 |
| MS.gene010944.t1 | MTR_1g108780 | 47.297 | 74 | 36 | 1 | 21 | 94 | 8 | 78 | 9.07e-19 | 80.1 |
| MS.gene010944.t1 | MTR_1g050845 | 41.758 | 91 | 51 | 1 | 10 | 100 | 6 | 94 | 1.56e-16 | 73.9 |
| MS.gene010944.t1 | MTR_1g035460 | 41.791 | 67 | 39 | 0 | 28 | 94 | 1 | 67 | 5.93e-16 | 72.0 |
| MS.gene010944.t1 | MTR_1g034240 | 36.471 | 85 | 54 | 0 | 13 | 97 | 7 | 91 | 7.47e-16 | 72.0 |
| MS.gene010944.t1 | MTR_1g035620 | 40.659 | 91 | 52 | 1 | 10 | 100 | 6 | 94 | 1.59e-15 | 70.9 |
| MS.gene010944.t1 | MTR_3g005480 | 31.818 | 88 | 60 | 0 | 5 | 92 | 13 | 100 | 2.09e-15 | 69.7 |
| MS.gene010944.t1 | MTR_3g061220 | 38.824 | 85 | 37 | 2 | 10 | 94 | 9 | 78 | 3.98e-15 | 66.2 |
| MS.gene010944.t1 | MTR_4g068320 | 33.750 | 80 | 53 | 0 | 13 | 92 | 6 | 85 | 7.41e-15 | 68.9 |
| MS.gene010944.t1 | MTR_1g021400 | 34.568 | 81 | 53 | 0 | 11 | 91 | 28 | 108 | 2.24e-14 | 67.8 |
| MS.gene010944.t1 | MTR_4g119990 | 40.000 | 85 | 50 | 1 | 11 | 94 | 13 | 97 | 3.20e-14 | 67.0 |
| MS.gene010944.t1 | MTR_1g021320 | 34.568 | 81 | 53 | 0 | 11 | 91 | 23 | 103 | 6.55e-14 | 66.6 |
| MS.gene010944.t1 | MTR_1g021320 | 34.940 | 83 | 51 | 1 | 12 | 91 | 178 | 260 | 2.07e-11 | 59.3 |
| MS.gene010944.t1 | MTR_3g005490 | 30.864 | 81 | 56 | 0 | 12 | 92 | 20 | 100 | 1.24e-13 | 65.1 |
| MS.gene010944.t1 | MTR_1g021440 | 34.568 | 81 | 52 | 1 | 11 | 91 | 21 | 100 | 1.38e-13 | 65.1 |
| MS.gene010944.t1 | MTR_1g021440 | 34.568 | 81 | 52 | 1 | 11 | 91 | 21 | 100 | 1.70e-13 | 64.7 |
| MS.gene010944.t1 | MTR_1g034210 | 36.471 | 85 | 54 | 0 | 13 | 97 | 7 | 91 | 1.95e-13 | 65.1 |
| MS.gene010944.t1 | MTR_1g021440 | 34.568 | 81 | 52 | 1 | 11 | 91 | 21 | 100 | 3.88e-13 | 64.3 |
| MS.gene010944.t1 | MTR_1g021440 | 34.568 | 81 | 52 | 1 | 11 | 91 | 21 | 100 | 3.94e-13 | 63.9 |
| MS.gene010944.t1 | MTR_1g034210 | 36.471 | 85 | 54 | 0 | 13 | 97 | 7 | 91 | 3.96e-13 | 63.9 |
| MS.gene010944.t1 | MTR_1g035480 | 40.476 | 84 | 47 | 2 | 8 | 91 | 12 | 92 | 4.92e-13 | 62.0 |
| MS.gene010944.t1 | MTR_1g021380 | 34.568 | 81 | 52 | 1 | 11 | 91 | 20 | 99 | 6.77e-13 | 63.5 |
| MS.gene010944.t1 | MTR_6g043890 | 38.095 | 84 | 51 | 1 | 11 | 93 | 13 | 96 | 1.12e-12 | 62.8 |
| MS.gene010944.t1 | MTR_3g005460 | 33.000 | 100 | 63 | 2 | 2 | 97 | 248 | 347 | 1.44e-12 | 62.8 |
| MS.gene010944.t1 | MTR_3g005460 | 31.034 | 87 | 60 | 0 | 6 | 92 | 18 | 104 | 7.98e-11 | 57.8 |
| MS.gene010944.t1 | MTR_3g005495 | 35.955 | 89 | 55 | 1 | 4 | 92 | 236 | 322 | 2.06e-12 | 62.0 |
| MS.gene010944.t1 | MTR_1g035640 | 42.500 | 80 | 40 | 2 | 12 | 91 | 8 | 81 | 2.77e-12 | 61.6 |
| MS.gene010944.t1 | MTR_1g035500 | 36.782 | 87 | 52 | 2 | 6 | 92 | 18 | 101 | 3.18e-12 | 60.1 |
| MS.gene010944.t1 | MTR_1g035650 | 37.349 | 83 | 50 | 1 | 10 | 92 | 6 | 86 | 3.39e-12 | 60.5 |
| MS.gene010944.t1 | MTR_3g005420 | 33.708 | 89 | 57 | 1 | 4 | 92 | 282 | 368 | 3.40e-12 | 61.6 |
| MS.gene010944.t1 | MTR_1g021435 | 32.099 | 81 | 55 | 0 | 11 | 91 | 20 | 100 | 5.98e-12 | 60.8 |
| MS.gene010944.t1 | MTR_5g070440 | 28.395 | 81 | 58 | 0 | 12 | 92 | 20 | 100 | 2.22e-11 | 58.9 |
| MS.gene010944.t1 | MTR_6g061070 | 37.931 | 87 | 51 | 2 | 6 | 92 | 11 | 94 | 2.92e-11 | 58.9 |
| MS.gene010944.t1 | MTR_1g021410 | 32.099 | 81 | 54 | 1 | 11 | 91 | 21 | 100 | 3.68e-11 | 58.5 |
| MS.gene010944.t1 | MTR_1g021360 | 34.940 | 83 | 51 | 1 | 12 | 91 | 178 | 260 | 3.73e-11 | 58.5 |
| MS.gene010944.t1 | MTR_1g021350 | 32.099 | 81 | 54 | 1 | 11 | 91 | 20 | 99 | 3.76e-11 | 58.5 |
| MS.gene010944.t1 | MTR_1g021290 | 33.333 | 78 | 51 | 1 | 14 | 91 | 157 | 233 | 4.14e-11 | 58.2 |
| MS.gene010944.t1 | MTR_1g021330 | 30.864 | 81 | 56 | 0 | 11 | 91 | 24 | 104 | 7.38e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010944.t1 | AT3G18990 | 40.000 | 80 | 48 | 0 | 13 | 92 | 6 | 85 | 1.70e-17 | 76.3 |
| MS.gene010944.t1 | AT3G18990 | 40.000 | 80 | 48 | 0 | 13 | 92 | 6 | 85 | 2.07e-17 | 75.9 |
| MS.gene010944.t1 | AT1G49475 | 38.372 | 86 | 52 | 1 | 13 | 98 | 34 | 118 | 2.13e-16 | 71.2 |
| MS.gene010944.t1 | AT3G18960 | 37.209 | 86 | 54 | 0 | 13 | 98 | 30 | 115 | 3.81e-16 | 70.5 |
| MS.gene010944.t1 | AT3G18960 | 37.209 | 86 | 54 | 0 | 13 | 98 | 30 | 115 | 4.51e-16 | 70.5 |
| MS.gene010944.t1 | AT4G01580 | 37.209 | 86 | 54 | 0 | 13 | 98 | 30 | 115 | 4.57e-16 | 70.1 |
| MS.gene010944.t1 | AT3G18960 | 41.429 | 70 | 41 | 0 | 29 | 98 | 9 | 78 | 9.58e-14 | 63.9 |
Find 19 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGATTTGTACCTCAAATT+TGG | 0.160650 | 7.1:+51590528 | None:intergenic |
| TGCAAAATGGAAATTAAATT+TGG | 0.185593 | 7.1:-51590655 | MS.gene010944:CDS |
| AAATTTGAGGTACAAATCTT+TGG | 0.251414 | 7.1:-51590526 | MS.gene010944:CDS |
| GTCTCTAGACATATAGCTTT+TGG | 0.313968 | 7.1:+51590687 | None:intergenic |
| AGACTCCAAATGGTGCAAAA+TGG | 0.357064 | 7.1:-51590668 | MS.gene010944:CDS |
| AAAGGCTTACAAGGTTTCCT+TGG | 0.416023 | 7.1:+51591378 | None:intergenic |
| CAATGAGTGATGGCAAGATA+TGG | 0.428994 | 7.1:-51590632 | MS.gene010944:CDS |
| AATCTTTGGAAAGAGTGCTT+TGG | 0.429279 | 7.1:-51590512 | MS.gene010944:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.433802 | 7.1:-51590730 | MS.gene010944:CDS |
| AGATATGGTTTGAGAAGGGT+TGG | 0.481735 | 7.1:-51590617 | MS.gene010944:CDS |
| TTAAATTTGGCAATGAGTGA+TGG | 0.512239 | 7.1:-51590642 | MS.gene010944:CDS |
| TTACAAGGTTTCCTTGGAGA+AGG | 0.514232 | 7.1:+51591384 | None:intergenic |
| TTTGCAGAGCATCACTCTCT+AGG | 0.540785 | 7.1:-51590588 | MS.gene010944:CDS |
| TGGCAAGATATGGTTTGAGA+AGG | 0.555350 | 7.1:-51590622 | MS.gene010944:CDS |
| ATATGTCTAGAGACTCCAAA+TGG | 0.586498 | 7.1:-51590678 | MS.gene010944:CDS |
| GAGCATCACTCTCTAGGTCA+TGG | 0.595626 | 7.1:-51590582 | MS.gene010944:CDS |
| GGCAAGATATGGTTTGAGAA+GGG | 0.606783 | 7.1:-51590621 | MS.gene010944:CDS |
| GTTACTCAAAACCTTCTCCA+AGG | 0.614774 | 7.1:-51591395 | MS.gene010944:CDS |
| CATGGCTAGTGAAATTGCTG+AGG | 0.726199 | 7.1:-51591447 | MS.gene010944:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATCATTCATATTAATA+TGG | - | chr7.1:51591184-51591203 | MS.gene010944:intron | 10.0% |
| !!! | ATATTATTTTACATTACTTT+AGG | + | chr7.1:51591160-51591179 | None:intergenic | 10.0% |
| !!! | TTAAAAAAAGCATAAAAATA+AGG | + | chr7.1:51590881-51590900 | None:intergenic | 10.0% |
| !! | AAAACAAGTAACTTCAAATT+TGG | - | chr7.1:51590736-51590755 | MS.gene010944:intron | 20.0% |
| !! | ATTCAATTGTTCTGTAATTT+AGG | + | chr7.1:51590833-51590852 | None:intergenic | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | - | chr7.1:51591297-51591316 | MS.gene010944:intron | 20.0% |
| ! | AAAGATTTGTACCTCAAATT+TGG | + | chr7.1:51591427-51591446 | None:intergenic | 25.0% |
| ! | AACATCAACAAAGAATCTAA+AGG | + | chr7.1:51590595-51590614 | None:intergenic | 25.0% |
| ! | AGAAAGTTTGTGGAAAAATA+TGG | - | chr7.1:51591232-51591251 | MS.gene010944:intron | 25.0% |
| ! | ATGAAAAAACTCCAAATTTG+AGG | - | chr7.1:51591413-51591432 | MS.gene010944:CDS | 25.0% |
| ! | ATGGGACAAATTGAATAAAT+TGG | + | chr7.1:51591101-51591120 | None:intergenic | 25.0% |
| ! | TAACTATGATCTTGAAAAAG+TGG | + | chr7.1:51590541-51590560 | None:intergenic | 25.0% |
| ! | TTTATTCAATTTGTCCCATT+TGG | - | chr7.1:51591102-51591121 | MS.gene010944:intron | 25.0% |
| ! | TTTGTGGAAAAATATGGAAA+AGG | - | chr7.1:51591238-51591257 | MS.gene010944:intron | 25.0% |
| !! | AAATTTGAGGTACAAATCTT+TGG | - | chr7.1:51591426-51591445 | MS.gene010944:CDS | 25.0% |
| !! | CGATTACTTGTTAAAAACTT+GGG | - | chr7.1:51591028-51591047 | MS.gene010944:intron | 25.0% |
| !! | TACATTACTTTAGGAAATAC+TGG | + | chr7.1:51591151-51591170 | None:intergenic | 25.0% |
| !! | TATTTTTCCACAAACTTTCT+TGG | + | chr7.1:51591232-51591251 | None:intergenic | 25.0% |
| !! | TCGATTACTTGTTAAAAACT+TGG | - | chr7.1:51591027-51591046 | MS.gene010944:intron | 25.0% |
| !!! | TTTTAAGAACGTTTCTCTTT+AGG | - | chr7.1:51590895-51590914 | MS.gene010944:intron | 25.0% |
| AAAGAATCTAAAGGCTTACA+AGG | + | chr7.1:51590586-51590605 | None:intergenic | 30.0% | |
| AAGAAACCTAAATACACATC+AGG | + | chr7.1:51590991-51591010 | None:intergenic | 30.0% | |
| ATGATCTTGAAAAAGTGGAT+TGG | + | chr7.1:51590536-51590555 | None:intergenic | 30.0% | |
| CATATCTAAAAAGCAGAAGA+TGG | + | chr7.1:51591396-51591415 | None:intergenic | 30.0% | |
| TAACTACCTGATGTGTATTT+AGG | - | chr7.1:51590982-51591001 | MS.gene010944:intron | 30.0% | |
| TACCAGATTATGTTTATTCC+AGG | + | chr7.1:51590960-51590979 | None:intergenic | 30.0% | |
| TCCAGGAGTTAATTGTATTA+GGG | + | chr7.1:51590943-51590962 | None:intergenic | 30.0% | |
| TTAAATTTGGCAATGAGTGA+TGG | - | chr7.1:51591310-51591329 | MS.gene010944:intron | 30.0% | |
| TTCCAGGAGTTAATTGTATT+AGG | + | chr7.1:51590944-51590963 | None:intergenic | 30.0% | |
| ! | AACAATTGAATCATTTTCGC+CGG | - | chr7.1:51590842-51590861 | MS.gene010944:intron | 30.0% |
| ! | AATTTCCATTTTGCACCATT+TGG | + | chr7.1:51591292-51591311 | None:intergenic | 30.0% |
| ! | TAAAACAGAGCTGTCAATTT+TGG | - | chr7.1:51590786-51590805 | MS.gene010944:intron | 30.0% |
| !! | TCAATTTTGGTCAAACCTAA+TGG | - | chr7.1:51590799-51590818 | MS.gene010944:intron | 30.0% |
| AGAAAAGAATAGAGAGGTTC+AGG | + | chr7.1:51590710-51590729 | None:intergenic | 35.0% | |
| ATATGTCTAGAGACTCCAAA+TGG | - | chr7.1:51591274-51591293 | MS.gene010944:intron | 35.0% | |
| CAGGAGTTAATTGTATTAGG+GGG | + | chr7.1:51590941-51590960 | None:intergenic | 35.0% | |
| CCAGGAGTTAATTGTATTAG+GGG | + | chr7.1:51590942-51590961 | None:intergenic | 35.0% | |
| CCTGTTAGAAAAGAATAGAG+AGG | + | chr7.1:51590716-51590735 | None:intergenic | 35.0% | |
| CTCCTGGAATAAACATAATC+TGG | - | chr7.1:51590955-51590974 | MS.gene010944:intron | 35.0% | |
| ! | CCTCTCTATTCTTTTCTAAC+AGG | - | chr7.1:51590713-51590732 | MS.gene010944:CDS | 35.0% |
| ! | GTCTCTAGACATATAGCTTT+TGG | + | chr7.1:51591268-51591287 | None:intergenic | 35.0% |
| !! | AATCTTTGGAAAGAGTGCTT+TGG | - | chr7.1:51591440-51591459 | MS.gene010944:CDS | 35.0% |
| AAAGGCTTACAAGGTTTCCT+TGG | + | chr7.1:51590577-51590596 | None:intergenic | 40.0% | |
| AATTTGTCCCATTTGGCTAG+GGG | - | chr7.1:51591109-51591128 | MS.gene010944:intron | 40.0% | |
| AGAATAGAGAGGTTCAGGTA+AGG | + | chr7.1:51590705-51590724 | None:intergenic | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | - | chr7.1:51591284-51591303 | MS.gene010944:intron | 40.0% | |
| AGATATGGTTTGAGAAGGGT+TGG | - | chr7.1:51591335-51591354 | MS.gene010944:intron | 40.0% | |
| AGCCTAAAACACACCAGTTT+GGG | + | chr7.1:51591064-51591083 | None:intergenic | 40.0% | |
| CAATGAGTGATGGCAAGATA+TGG | - | chr7.1:51591320-51591339 | MS.gene010944:intron | 40.0% | |
| CAATTTGTCCCATTTGGCTA+GGG | - | chr7.1:51591108-51591127 | MS.gene010944:intron | 40.0% | |
| CCCCTAATACAATTAACTCC+TGG | - | chr7.1:51590939-51590958 | MS.gene010944:intron | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | - | chr7.1:51591222-51591241 | MS.gene010944:intron | 40.0% | |
| GGCAAGATATGGTTTGAGAA+GGG | - | chr7.1:51591331-51591350 | MS.gene010944:intron | 40.0% | |
| GTTACTCAAAACCTTCTCCA+AGG | - | chr7.1:51590557-51590576 | MS.gene010944:CDS | 40.0% | |
| TAGCCTAAAACACACCAGTT+TGG | + | chr7.1:51591065-51591084 | None:intergenic | 40.0% | |
| TCAATTTGTCCCATTTGGCT+AGG | - | chr7.1:51591107-51591126 | MS.gene010944:intron | 40.0% | |
| TGGCAAGATATGGTTTGAGA+AGG | - | chr7.1:51591330-51591349 | MS.gene010944:intron | 40.0% | |
| TTACAAGGTTTCCTTGGAGA+AGG | + | chr7.1:51590571-51590590 | None:intergenic | 40.0% | |
| ! | AAAACACACCAGTTTGGGTT+TGG | + | chr7.1:51591059-51591078 | None:intergenic | 40.0% |
| ! | AACCCAAACTGGTGTGTTTT+AGG | - | chr7.1:51591059-51591078 | MS.gene010944:intron | 40.0% |
| ! | ATTGAATCATTTTCGCCGGT+TGG | - | chr7.1:51590846-51590865 | MS.gene010944:intron | 40.0% |
| ! | ATTTAGGAGTGCAGTCCATT+AGG | + | chr7.1:51590817-51590836 | None:intergenic | 40.0% |
| ACAAACTCCCCTAGCCAAAT+GGG | + | chr7.1:51591119-51591138 | None:intergenic | 45.0% | |
| AGGCCCCACAAATATCTCTA+AGG | - | chr7.1:51590915-51590934 | MS.gene010944:intron | 45.0% | |
| GGGCCTTAGAGATATTTGTG+GGG | + | chr7.1:51590921-51590940 | None:intergenic | 45.0% | |
| GGGGCCTTAGAGATATTTGT+GGG | + | chr7.1:51590922-51590941 | None:intergenic | 45.0% | |
| ! | TTTGCAGAGCATCACTCTCT+AGG | - | chr7.1:51591364-51591383 | MS.gene010944:intron | 45.0% |
| ATAAGGCCGAGTGAACCAAC+CGG | + | chr7.1:51590864-51590883 | None:intergenic | 50.0% | |
| CACAAACTCCCCTAGCCAAA+TGG | + | chr7.1:51591120-51591139 | None:intergenic | 50.0% | |
| GAGCATCACTCTCTAGGTCA+TGG | - | chr7.1:51591370-51591389 | MS.gene010944:intron | 50.0% | |
| GGGGGCCTTAGAGATATTTG+TGG | + | chr7.1:51590923-51590942 | None:intergenic | 50.0% | |
| TTTGGCTAGGGGAGTTTGTG+TGG | - | chr7.1:51591120-51591139 | MS.gene010944:intron | 50.0% | |
| !! | TTTTCGCCGGTTGGTTCACT+CGG | - | chr7.1:51590855-51590874 | MS.gene010944:intron | 50.0% |
| GGGCTTAGCCAAACCCAAAC+TGG | - | chr7.1:51591048-51591067 | MS.gene010944:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 51590506 | 51591468 | 51590506 | ID=MS.gene010944 |
| chr7.1 | mRNA | 51590506 | 51591468 | 51590506 | ID=MS.gene010944.t1;Parent=MS.gene010944 |
| chr7.1 | exon | 51591388 | 51591468 | 51591388 | ID=MS.gene010944.t1.exon1;Parent=MS.gene010944.t1 |
| chr7.1 | CDS | 51591388 | 51591468 | 51591388 | ID=cds.MS.gene010944.t1;Parent=MS.gene010944.t1 |
| chr7.1 | exon | 51590506 | 51590751 | 51590506 | ID=MS.gene010944.t1.exon2;Parent=MS.gene010944.t1 |
| chr7.1 | CDS | 51590506 | 51590751 | 51590506 | ID=cds.MS.gene010944.t1;Parent=MS.gene010944.t1 |
| Gene Sequence |
| Protein sequence |
