AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011032

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011032.t1 MTR_7g052480 94.444 378 21 0 52 429 179 556 0.0 753
MS.gene011032.t1 MTR_7g052480 66.667 81 24 2 1 80 1 79 9.80e-22 97.8
MS.gene011032.t1 MTR_7g084090 56.250 336 143 3 98 429 422 757 4.89e-127 385
MS.gene011032.t1 MTR_6g061270 55.952 336 144 3 98 429 359 694 4.18e-125 378
MS.gene011032.t1 MTR_6g061200 52.083 336 128 4 98 429 359 665 2.01e-110 339
MS.gene011032.t1 MTR_5g013420 46.552 290 141 8 143 429 811 1089 1.09e-70 241
MS.gene011032.t1 MTR_5g013420 46.207 290 142 8 143 429 811 1089 1.46e-69 238
MS.gene011032.t1 MTR_4g010830 42.230 296 153 6 139 429 698 980 2.02e-65 226
MS.gene011032.t1 MTR_7g084090 49.774 221 107 3 98 314 422 642 2.88e-65 221
MS.gene011032.t1 MTR_4g010550 39.590 293 147 7 140 429 199 464 5.39e-58 197
MS.gene011032.t1 MTR_7g088370 30.211 331 202 6 100 425 395 701 7.99e-46 169
MS.gene011032.t1 MTR_7g445710 34.323 303 153 10 139 429 275 543 4.13e-44 162
MS.gene011032.t1 MTR_3g011440 30.941 404 235 12 52 425 271 660 3.88e-43 160
MS.gene011032.t1 MTR_8g042750 34.130 293 180 8 139 425 399 684 9.48e-43 160
MS.gene011032.t1 MTR_8g070070 33.660 306 185 10 100 399 463 756 1.06e-41 157
MS.gene011032.t1 MTR_8g070075 32.353 306 189 10 100 399 456 749 1.08e-41 157
MS.gene011032.t1 MTR_7g450730 33.103 290 142 7 142 429 266 505 1.96e-40 151
MS.gene011032.t1 MTR_1g035420 32.797 311 195 8 100 406 352 652 2.94e-40 152
MS.gene011032.t1 MTR_8g071030 35.632 261 153 7 143 399 487 736 5.84e-40 152
MS.gene011032.t1 MTR_1g035400 32.692 312 192 9 100 405 271 570 8.13e-40 150
MS.gene011032.t1 MTR_0376s0030 30.645 310 193 9 100 399 264 561 3.77e-36 140
MS.gene011032.t1 MTR_1g048950 33.227 313 161 10 124 429 262 533 5.10e-35 137
MS.gene011032.t1 MTR_8g078490 29.565 345 173 12 124 429 940 1253 1.26e-33 134
MS.gene011032.t1 MTR_6g044690 28.707 317 194 12 98 399 264 563 2.27e-32 129
MS.gene011032.t1 MTR_7g445530 32.721 272 137 10 139 398 275 512 2.72e-32 128
MS.gene011032.t1 MTR_1g069570 31.085 341 149 14 143 425 430 742 1.16e-31 128
MS.gene011032.t1 MTR_5g018850 29.819 332 161 11 139 429 1207 1507 3.81e-29 121
MS.gene011032.t1 MTR_4g132610 35.294 221 118 5 210 429 851 1047 6.16e-29 120
MS.gene011032.t1 MTR_6g043960 27.597 308 195 11 105 399 189 481 7.93e-29 118
MS.gene011032.t1 MTR_1g080340 30.058 346 153 14 142 427 268 584 1.78e-28 118
MS.gene011032.t1 MTR_8g078505 35.385 195 98 3 211 400 346 517 1.92e-26 112
MS.gene011032.t1 MTR_7g098390 28.743 334 164 11 143 425 388 698 3.24e-26 112
MS.gene011032.t1 MTR_2g054460 29.851 201 132 4 201 399 270 463 2.36e-23 102
MS.gene011032.t1 MTR_7g445600 32.692 156 62 1 243 398 243 355 7.51e-22 96.7
MS.gene011032.t1 MTR_1g069570 30.147 272 108 12 143 357 430 676 4.71e-20 93.2
MS.gene011032.t1 MTR_1g012890 28.249 177 93 5 252 428 225 367 7.84e-12 67.0
MS.gene011032.t1 MTR_1g064770 45.614 57 30 1 226 281 31 87 2.52e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011032.t1 AT5G13960 55.060 336 146 4 98 429 156 490 8.15e-129 381
MS.gene011032.t1 AT5G13960 55.060 336 146 4 98 429 290 624 6.14e-128 383
MS.gene011032.t1 AT2G22740 40.064 312 163 9 128 429 493 790 9.13e-58 202
MS.gene011032.t1 AT2G22740 40.064 312 163 9 128 429 493 790 9.13e-58 202
MS.gene011032.t1 AT2G35160 35.014 357 187 9 81 429 439 758 1.57e-56 199
MS.gene011032.t1 AT2G35160 35.014 357 187 9 81 429 475 794 3.17e-56 198
MS.gene011032.t1 AT2G35160 35.014 357 187 9 81 429 475 794 3.17e-56 198
MS.gene011032.t1 AT2G35160 35.014 357 187 9 81 429 475 794 3.17e-56 198
MS.gene011032.t1 AT2G35160 35.014 357 187 9 81 429 475 794 3.17e-56 198
MS.gene011032.t1 AT1G73100 32.997 297 188 6 133 425 376 665 2.07e-46 170
MS.gene011032.t1 AT2G33290 35.526 304 163 10 118 399 346 638 2.91e-43 161
MS.gene011032.t1 AT2G33290 35.526 304 163 10 118 399 346 638 2.91e-43 161
MS.gene011032.t1 AT2G33290 35.526 304 163 10 118 399 346 638 2.91e-43 161
MS.gene011032.t1 AT2G33290 35.526 304 163 10 118 399 346 638 2.91e-43 161
MS.gene011032.t1 AT4G13460 32.581 310 193 9 100 403 342 641 1.47e-42 159
MS.gene011032.t1 AT4G13460 32.581 310 193 9 100 403 342 641 1.47e-42 159
MS.gene011032.t1 AT5G04940 32.215 298 188 7 133 425 378 666 1.52e-41 156
MS.gene011032.t1 AT5G04940 32.215 298 188 7 133 425 378 666 1.52e-41 156
MS.gene011032.t1 AT1G17770 31.250 304 188 9 133 425 396 689 9.46e-36 140
MS.gene011032.t1 AT2G23740 32.544 338 166 14 124 428 1073 1381 1.90e-32 130
MS.gene011032.t1 AT2G23740 32.544 338 166 14 124 428 1073 1381 1.90e-32 130
MS.gene011032.t1 AT2G23740 32.544 338 166 14 124 428 1073 1381 1.90e-32 130
MS.gene011032.t1 AT2G23740 32.544 338 166 14 124 428 1066 1374 2.15e-32 130
MS.gene011032.t1 AT3G04380 28.107 338 167 10 143 427 146 460 1.58e-26 112
MS.gene011032.t1 AT3G04380 28.107 338 167 10 143 427 119 433 1.72e-26 111
MS.gene011032.t1 AT3G04380 28.107 338 167 10 143 427 130 444 1.98e-26 111
MS.gene011032.t1 AT3G04380 28.107 338 167 10 143 427 119 433 2.03e-26 111
MS.gene011032.t1 AT3G04380 28.107 338 167 10 143 427 146 460 2.09e-26 111
MS.gene011032.t1 AT3G04380 28.107 338 167 10 143 427 103 417 2.40e-26 110
MS.gene011032.t1 AT1G04050 32.524 206 109 6 226 427 438 617 5.17e-25 108
MS.gene011032.t1 AT1G04050 32.524 206 109 6 226 427 542 721 5.25e-25 108
MS.gene011032.t1 AT1G04050 32.524 206 109 6 226 427 542 721 5.25e-25 108
MS.gene011032.t1 AT2G24740 29.352 293 183 10 139 425 477 751 1.26e-24 107
MS.gene011032.t1 AT2G23740 32.959 267 121 13 124 357 1073 1314 4.06e-22 100
MS.gene011032.t1 AT2G23740 32.959 267 121 13 124 357 1073 1314 4.06e-22 100
MS.gene011032.t1 AT3G03750 31.120 241 124 8 188 424 143 345 8.47e-21 93.6
MS.gene011032.t1 AT4G30860 28.218 202 103 6 227 428 305 464 3.53e-12 68.6
MS.gene011032.t1 AT2G44150 28.638 213 99 7 229 428 82 254 8.74e-11 63.5

Find 88 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATAGATGCTGGTTCTTT+TGG 0.193774 7.1:+49364532 MS.gene011032:CDS
ATTGAATCTTAGAGTGATTC+TGG 0.200218 7.1:-49360502 None:intergenic
TTGGCTTTAGGTTCATTTAA+TGG 0.273794 7.1:+49363237 MS.gene011032:intron
TCTTACCGCCCAACCTTTCT+TGG 0.287241 7.1:-49364194 None:intergenic
GAAACTTTGTTTCCACATTT+AGG 0.290820 7.1:-49364040 None:intergenic
GCTTTACCTGTGGGTGCAAC+TGG 0.322517 7.1:-49363470 None:intergenic
CAGGAACTCACCTATGACTA+TGG 0.342829 7.1:+49365528 MS.gene011032:intron
TGGAAGTAAAGAGGAAAGTT+TGG 0.346273 7.1:+49360586 MS.gene011032:CDS
CCAGCATCTATGCAATATTC+AGG 0.354345 7.1:-49364523 None:intergenic
AGAAGACATACCTCCCTATC+AGG 0.387240 7.1:+49364663 MS.gene011032:CDS
TGTTCTTGTGCTAATCATAA+TGG 0.392666 7.1:+49363768 MS.gene011032:CDS
AGCAAGAATCGACACAAGAT+AGG 0.395673 7.1:+49361946 MS.gene011032:CDS
CACACAATCAATGGTGTAGA+TGG 0.399488 7.1:+49364334 MS.gene011032:CDS
GCACCAGTTGTCGAGTATAT+TGG 0.400887 7.1:+49364241 MS.gene011032:CDS
ATTGATAACGAATACGTTCC+TGG 0.401461 7.1:+49362431 MS.gene011032:CDS
TGGAAACAAAGTTTCTCAAC+AGG 0.404546 7.1:+49364048 MS.gene011032:CDS
AGTATCTGATAAATAAGCTT+CGG 0.405640 7.1:+49362468 MS.gene011032:CDS
TTGCATCCCGCAGCACTAGA+TGG 0.412772 7.1:-49363717 None:intergenic
CATGTTGAAAAGATTGAACT+TGG 0.416250 7.1:+49360566 MS.gene011032:CDS
GTATCTGATAAATAAGCTTC+GGG 0.422102 7.1:+49362469 MS.gene011032:CDS
CTTACCGCCCAACCTTTCTT+GGG 0.422197 7.1:-49364193 None:intergenic
ATTAGCACAAGAACATCGTT+TGG 0.435566 7.1:-49363760 None:intergenic
ACACATTGTACAAAGAGGTT+TGG 0.447308 7.1:-49364589 None:intergenic
TTCTTTAAGTTTGGTATGCA+AGG 0.458357 7.1:+49363388 MS.gene011032:intron
ATCGTACTCCCAAGAAAGGT+TGG 0.459933 7.1:+49364185 MS.gene011032:CDS
TACAAAGAGGAATACCTGAT+AGG 0.463396 7.1:-49364677 None:intergenic
TGGAGGATCATCAAAATCAT+TGG 0.466153 7.1:-49363450 None:intergenic
TTCTGACAATGAGGCTATGA+TGG 0.479441 7.1:+49360454 MS.gene011032:CDS
GATAAATTGCTTATAGGCAA+TGG 0.479915 7.1:-49364469 None:intergenic
GATTGTTTGCACACAATCAA+TGG 0.481537 7.1:+49364325 MS.gene011032:CDS
ACACCAATATACTCGACAAC+TGG 0.483092 7.1:-49364244 None:intergenic
ACATGGGACTTTATCCCATC+AGG 0.487648 7.1:+49364217 MS.gene011032:CDS
GAGTGTGTAACCATAGTCAT+AGG 0.489551 7.1:-49365538 None:intergenic
ACAAAGAGGAATACCTGATA+GGG 0.490411 7.1:-49364676 None:intergenic
GCTTCGGGAACTTGCTAAAG+TGG 0.493084 7.1:+49362484 MS.gene011032:CDS
AGTCTTGAACTCACTCTTGT+TGG 0.498838 7.1:-49360479 None:intergenic
TCGTACTCCCAAGAAAGGTT+GGG 0.500282 7.1:+49364186 MS.gene011032:CDS
AGAGGTTTGGTTCACATCCA+TGG 0.504457 7.1:-49364576 None:intergenic
CTAGATGGAACTTCAATGCT+TGG 0.505910 7.1:-49363702 None:intergenic
CGACAACTGGTGCACCTGAT+GGG 0.509774 7.1:-49364231 None:intergenic
TACTTCGAAGTAGTGATTCC+AGG 0.513375 7.1:-49362449 None:intergenic
GTTTCAAGATTTATCAACCA+TGG 0.515474 7.1:+49364559 MS.gene011032:CDS
GTTTATCGTACTCCCAAGAA+AGG 0.517387 7.1:+49364181 MS.gene011032:CDS
TCGACAACTGGTGCACCTGA+TGG 0.518260 7.1:-49364232 None:intergenic
GAAGTTCCATCTAGTGCTGC+GGG 0.529357 7.1:+49363711 MS.gene011032:CDS
AAACTCTTTCTTCTTCTCCA+AGG 0.531848 7.1:+49363275 MS.gene011032:CDS
TGCTAAAGTGGGAACATACA+AGG 0.533120 7.1:+49362496 MS.gene011032:CDS
TTTCATACAATAACATTGGC+CGG 0.533464 7.1:+49363799 MS.gene011032:CDS
CCTGAATATTGCATAGATGC+TGG 0.535805 7.1:+49364523 MS.gene011032:CDS
CTAAGTAGAGACGATGAGCT+AGG 0.538306 7.1:+49364268 MS.gene011032:CDS
TTTAGGTTCATTTAATGGAA+GGG 0.538367 7.1:+49363242 MS.gene011032:intron
CTTTAGGTTCATTTAATGGA+AGG 0.538474 7.1:+49363241 MS.gene011032:intron
CTAGACATCGTGGTCGAATG+TGG 0.546755 7.1:+49363998 MS.gene011032:CDS
AAGTTTGGTATCAACATCAA+AGG 0.550778 7.1:+49360601 MS.gene011032:CDS
GATTGAACTTGGAAGTAAAG+AGG 0.553834 7.1:+49360577 MS.gene011032:CDS
AAGGTTGGGCGGTAAGAACA+TGG 0.558115 7.1:+49364200 MS.gene011032:CDS
GCAAGAATCGACACAAGATA+GGG 0.566361 7.1:+49361947 MS.gene011032:CDS
GGGCTTAACTTACCGACTTG+AGG 0.566843 7.1:+49364069 MS.gene011032:CDS
TTACCTGTGGGTGCAACTGG+AGG 0.570878 7.1:-49363467 None:intergenic
GAAAATATAATCATTTCCGT+TGG 0.575559 7.1:-49364296 None:intergenic
TGAGAACACATTGTACAAAG+AGG 0.579762 7.1:-49364594 None:intergenic
GATAGTGTGTCTGATTCTGA+TGG 0.580918 7.1:+49365561 MS.gene011032:CDS
TGTGGACCGCAATGTGGATG+CGG 0.589925 7.1:+49364016 MS.gene011032:CDS
TGCTGCGGGATGCAATTGCA+AGG 0.591722 7.1:+49363725 MS.gene011032:CDS
TCAATGTCATTGTGGTGCAA+AGG 0.596456 7.1:+49365599 MS.gene011032:CDS
GTATGCAAGGACATTAGCAA+TGG 0.598177 7.1:+49363401 MS.gene011032:CDS
CTTCGGGAACTTGCTAAAGT+GGG 0.602929 7.1:+49362485 MS.gene011032:CDS
GATCCTCCAGTTGCACCCAC+AGG 0.606455 7.1:+49363464 MS.gene011032:CDS
TACTAAGAGTTCTGACAATG+AGG 0.616993 7.1:+49360445 MS.gene011032:CDS
AATGTTATTGTATGAAAACT+CGG 0.621218 7.1:-49363793 None:intergenic
CATTCGACCACGATGTCTAG+AGG 0.624366 7.1:-49363995 None:intergenic
CAATGGTGTAGATGGAAGAG+AGG 0.625940 7.1:+49364342 MS.gene011032:CDS
TGTGGATGCGGACCTAAATG+TGG 0.629564 7.1:+49364028 MS.gene011032:CDS
TGAAGTTCCATCTAGTGCTG+CGG 0.634941 7.1:+49363710 MS.gene011032:CDS
ATTGTAGAATGACCTCAAGT+CGG 0.636167 7.1:-49364081 None:intergenic
AAACAGCTTCAATGTCATTG+TGG 0.646249 7.1:+49365591 MS.gene011032:CDS
AAGAGGAATACCTGATAGGG+AGG 0.649275 7.1:-49364673 None:intergenic
AGCACTACACGAGTTAGTCT+AGG 0.650447 7.1:-49364631 None:intergenic
GCTGCGGGATGCAATTGCAA+GGG 0.655088 7.1:+49363726 MS.gene011032:CDS
AGGTTGGGCGGTAAGAACAT+GGG 0.665196 7.1:+49364201 MS.gene011032:CDS
TACTCCCAAGAAAGGTTGGG+CGG 0.669811 7.1:+49364189 MS.gene011032:CDS
GTCGAATGTGGACCGCAATG+TGG 0.680163 7.1:+49364010 MS.gene011032:CDS
GGAAACAAAGTTTCTCAACA+GGG 0.682009 7.1:+49364049 MS.gene011032:CDS
TTAGGTCCGCATCCACATTG+CGG 0.684443 7.1:-49364022 None:intergenic
TATAACATTTACAACAGCAG+CGG 0.694359 7.1:+49360524 MS.gene011032:CDS
GATGAGCTAGGAAGTGCCAA+CGG 0.706121 7.1:+49364280 MS.gene011032:CDS
GAGTTAGTCTAGGATCTCTG+TGG 0.731534 7.1:-49364621 None:intergenic
GATCGAGCCTCTAGACATCG+TGG 0.739663 7.1:+49363988 MS.gene011032:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAAAAACAAAAAACA+AGG - chr7.1:49362045-49362064 None:intergenic 10.0%
!! GTAAAAATTTAATAAACAAT+TGG + chr7.1:49365490-49365509 MS.gene011032:intron 10.0%
!! TAAAATATGTATGAAATTTA+GGG + chr7.1:49364390-49364409 MS.gene011032:intron 10.0%
!!! TAATATCTTATTAGAATTTT+GGG + chr7.1:49363048-49363067 MS.gene011032:intron 10.0%
!!! TAATTATTTTCATACATTTT+GGG + chr7.1:49365431-49365450 MS.gene011032:intron 10.0%
!!! TAATTGATTTTATTAGTTTT+TGG + chr7.1:49361474-49361493 MS.gene011032:intron 10.0%
!!! TTAATATCTTATTAGAATTT+TGG + chr7.1:49363047-49363066 MS.gene011032:intron 10.0%
!!! TTAATTATTTTCATACATTT+TGG + chr7.1:49365430-49365449 MS.gene011032:intron 10.0%
!! AAAAAATAACAGTAATAAGA+CGG + chr7.1:49365285-49365304 MS.gene011032:intron 15.0%
!! ATATAACTTGAGTAAAAAAA+AGG + chr7.1:49361213-49361232 MS.gene011032:intron 15.0%
!! ATTAGCAAAAACAATTTATA+AGG + chr7.1:49362869-49362888 MS.gene011032:intron 15.0%
!! GAAAAAAAAAAAAGGAAAAA+GGG - chr7.1:49363564-49363583 None:intergenic 15.0%
!! GAAAATACAATGAAAATTAA+TGG - chr7.1:49362202-49362221 None:intergenic 15.0%
!! GTAAAATATGTATGAAATTT+AGG + chr7.1:49364389-49364408 MS.gene011032:intron 15.0%
!! TAAAGCAAAAAAATATTAGA+TGG + chr7.1:49363487-49363506 MS.gene011032:intron 15.0%
!! TTAAGTAAGATGTATAAATA+TGG + chr7.1:49361118-49361137 MS.gene011032:intron 15.0%
!! TTACATATTATAAACATCAA+TGG - chr7.1:49364132-49364151 None:intergenic 15.0%
!! TTCTAATAAGATATTAAAGT+CGG - chr7.1:49363044-49363063 None:intergenic 15.0%
!!! ACTAGAAATTTTATTTTGAA+AGG + chr7.1:49365339-49365358 MS.gene011032:intron 15.0%
!!! GCATTATGTTTTAAAATTTT+AGG + chr7.1:49363648-49363667 MS.gene011032:intron 15.0%
!!! GTTTTTTCATTTTCAAAAAA+GGG - chr7.1:49363520-49363539 None:intergenic 15.0%
!!! TGTTTTTTCATTTTCAAAAA+AGG - chr7.1:49363521-49363540 None:intergenic 15.0%
!!! TTATTAAATTTTTACCATGA+AGG - chr7.1:49365485-49365504 None:intergenic 15.0%
!! AAAATTAAGATAGTATCATG+AGG - chr7.1:49362389-49362408 None:intergenic 20.0%
!! AAATAATACACACCTAAATT+GGG - chr7.1:49365204-49365223 None:intergenic 20.0%
!! AAGCAATTTATCTGAAAAAA+GGG + chr7.1:49364480-49364499 MS.gene011032:CDS 20.0%
!! AATGTTATTGTATGAAAACT+CGG - chr7.1:49363796-49363815 None:intergenic 20.0%
!! ATCGTATTTATACAATTATG+AGG + chr7.1:49361178-49361197 MS.gene011032:intron 20.0%
!! CATTGTTAATATAATCGATA+TGG - chr7.1:49365059-49365078 None:intergenic 20.0%
!! CGAAAAAAAAAAAAGGAAAA+AGG - chr7.1:49363565-49363584 None:intergenic 20.0%
!! GGTTAAAATGGAAATTTAAA+GGG - chr7.1:49364834-49364853 None:intergenic 20.0%
!! GTTAAAATGGAAATTTAAAG+GGG - chr7.1:49364833-49364852 None:intergenic 20.0%
!! TAAAGTTACTCCTAATTAAT+TGG - chr7.1:49362335-49362354 None:intergenic 20.0%
!! TAAATATATTAACACATAGC+CGG - chr7.1:49365259-49365278 None:intergenic 20.0%
!! TAAGCAATTTATCTGAAAAA+AGG + chr7.1:49364479-49364498 MS.gene011032:CDS 20.0%
!! TACATGATATCTTATTGAAT+GGG + chr7.1:49361264-49361283 MS.gene011032:intron 20.0%
!! TCGTATTCTAATATTCAATT+TGG + chr7.1:49363218-49363237 MS.gene011032:intron 20.0%
!! TGGTTAAAATGGAAATTTAA+AGG - chr7.1:49364835-49364854 None:intergenic 20.0%
!! TTAAAATCCTTATTACAAAG+AGG - chr7.1:49364693-49364712 None:intergenic 20.0%
!! TTAAAATGGAAATTTAAAGG+GGG - chr7.1:49364832-49364851 None:intergenic 20.0%
!! TTACATGATATCTTATTGAA+TGG + chr7.1:49361263-49361282 MS.gene011032:intron 20.0%
!! TTATATTAACAATGACAAGA+CGG + chr7.1:49365065-49365084 MS.gene011032:intron 20.0%
!!! AAATCTCAAGTAATTTGTTT+AGG - chr7.1:49361290-49361309 None:intergenic 20.0%
!!! ACATGTTTTATTTAAGCTTT+AGG - chr7.1:49362090-49362109 None:intergenic 20.0%
!!! ATTTGTTTTTTTTCTTGTCA+TGG + chr7.1:49363839-49363858 MS.gene011032:intron 20.0%
!!! CATGTTTTATTTAAGCTTTA+GGG - chr7.1:49362089-49362108 None:intergenic 20.0%
!!! GAATATTGTTTCTTTAAGTT+TGG + chr7.1:49363379-49363398 MS.gene011032:intron 20.0%
!!! TATATCATGATTTTAAATCG+CGG + chr7.1:49362118-49362137 MS.gene011032:intron 20.0%
!!! TTTTCAGATAAATTGCTTAT+AGG - chr7.1:49364478-49364497 None:intergenic 20.0%
!!! TTTTTTTTTTCCAAACATGA+TGG + chr7.1:49364757-49364776 MS.gene011032:intron 20.0%
! AATATAATCGATATGGATGA+CGG - chr7.1:49365052-49365071 None:intergenic 25.0%
! ACATAAATAATGTGCAACAT+TGG - chr7.1:49360961-49360980 None:intergenic 25.0%
! AGTATCTGATAAATAAGCTT+CGG + chr7.1:49362468-49362487 MS.gene011032:CDS 25.0%
! AGTTTGTGTTTATAGTTACT+GGG + chr7.1:49365158-49365177 MS.gene011032:intron 25.0%
! ATAATGTTAAGAGTCTTGAT+TGG - chr7.1:49363159-49363178 None:intergenic 25.0%
! ATCCAAAAGTAAAACAATAC+CGG - chr7.1:49363821-49363840 None:intergenic 25.0%
! ATGTTGCACATTATTTATGT+TGG + chr7.1:49360961-49360980 MS.gene011032:intron 25.0%
! ATTAGAATACGACATATAAG+TGG - chr7.1:49363210-49363229 None:intergenic 25.0%
! CAAATAATACACACCTAAAT+TGG - chr7.1:49365205-49365224 None:intergenic 25.0%
! CTCTTATTGTTAATATCATC+TGG - chr7.1:49360659-49360678 None:intergenic 25.0%
! CTTACAAAATCAACTTGTAA+AGG + chr7.1:49363087-49363106 MS.gene011032:intron 25.0%
! GAAAATATAATCATTTCCGT+TGG - chr7.1:49364299-49364318 None:intergenic 25.0%
! GATGATATTAACAATAAGAG+AGG + chr7.1:49360659-49360678 MS.gene011032:intron 25.0%
! GTGATGATATAGAAAATGTT+TGG - chr7.1:49362767-49362786 None:intergenic 25.0%
! TCAACTAAGAAATTAACTCT+AGG - chr7.1:49361432-49361451 None:intergenic 25.0%
! TTATTTAACGCTAAGTCAAA+AGG - chr7.1:49362011-49362030 None:intergenic 25.0%
! TTGTGTTTGTGTTAGAATTT+GGG + chr7.1:49362830-49362849 MS.gene011032:intron 25.0%
! TTTGTGTTTGTGTTAGAATT+TGG + chr7.1:49362829-49362848 MS.gene011032:intron 25.0%
!! AAAATATTGCAACACTTTTG+AGG + chr7.1:49361971-49361990 MS.gene011032:CDS 25.0%
!! AAATAACTGATTTCCAAATG+AGG - chr7.1:49361333-49361352 None:intergenic 25.0%
!! AAATATTGCAACACTTTTGA+GGG + chr7.1:49361972-49361991 MS.gene011032:CDS 25.0%
!! AAGATTGAACAAAAGTACAA+AGG - chr7.1:49362629-49362648 None:intergenic 25.0%
!! AATAACTGATTTCCAAATGA+GGG - chr7.1:49361332-49361351 None:intergenic 25.0%
!! CGTATTAGTTTCTTTCTTTA+TGG + chr7.1:49361375-49361394 MS.gene011032:intron 25.0%
!! GAGTTTTCATACAATAACAT+TGG + chr7.1:49363795-49363814 MS.gene011032:CDS 25.0%
!! TACTATCAGATTTTCACTAT+CGG - chr7.1:49363000-49363019 None:intergenic 25.0%
!! TACTATCTTAATTTTGTTGC+AGG + chr7.1:49362394-49362413 MS.gene011032:intron 25.0%
!! TAGTTTGTGTTTATAGTTAC+TGG + chr7.1:49365157-49365176 MS.gene011032:intron 25.0%
!! TTCAATCTTTTCAACATGTT+GGG - chr7.1:49360564-49360583 None:intergenic 25.0%
!! TTGGTATTTGCTAATTTAAC+AGG + chr7.1:49365509-49365528 MS.gene011032:intron 25.0%
!! TTTAGGTTCATTTAATGGAA+GGG + chr7.1:49363242-49363261 MS.gene011032:intron 25.0%
!!! AATTTCCATTTTAACCATGT+AGG + chr7.1:49364838-49364857 MS.gene011032:intron 25.0%
!!! ATATTTTTTTGCTTTACCTG+TGG - chr7.1:49363483-49363502 None:intergenic 25.0%
!!! ATCTTATTAGAATTTTGGGT+TGG + chr7.1:49363052-49363071 MS.gene011032:intron 25.0%
!!! ATTTCCATTTTAACCATGTA+GGG + chr7.1:49364839-49364858 MS.gene011032:intron 25.0%
!!! CTAATATTCAATTTGGCTTT+AGG + chr7.1:49363225-49363244 MS.gene011032:intron 25.0%
!!! CTTTACAAGTTGATTTTGTA+AGG - chr7.1:49363089-49363108 None:intergenic 25.0%
!!! GTTAAGATATGTTTTTGTGT+GGG + chr7.1:49362140-49362159 MS.gene011032:intron 25.0%
!!! GTTGGTTTTGTTGTTAAAAT+GGG + chr7.1:49365316-49365335 MS.gene011032:intron 25.0%
!!! TATTTTTTTGCTTTACCTGT+GGG - chr7.1:49363482-49363501 None:intergenic 25.0%
!!! TCATTGAAATTTTTCAGAGA+CGG + chr7.1:49364434-49364453 MS.gene011032:intron 25.0%
!!! TTTCTAGCTTCCAATTAATT+AGG + chr7.1:49362322-49362341 MS.gene011032:intron 25.0%
AAACCAAAATGCGAAATGTT+TGG + chr7.1:49362239-49362258 MS.gene011032:intron 30.0%
AAGGAAAAAGGGACATATAT+TGG - chr7.1:49363553-49363572 None:intergenic 30.0%
AAGGAAGTTATCGTCAATAA+GGG - chr7.1:49365466-49365485 None:intergenic 30.0%
AAGGATATAAGACCTCAATA+TGG - chr7.1:49362919-49362938 None:intergenic 30.0%
AAGTTTGGTATCAACATCAA+AGG + chr7.1:49360601-49360620 MS.gene011032:CDS 30.0%
AATAACAGTAATAAGACGGT+AGG + chr7.1:49365289-49365308 MS.gene011032:intron 30.0%
AATGATTCACTTGTCTTTGA+TGG + chr7.1:49360806-49360825 MS.gene011032:intron 30.0%
AGGTATTCCTCTTTGTAATA+AGG + chr7.1:49364683-49364702 MS.gene011032:intron 30.0%
ATCAAACATACCATCATAGT+GGG - chr7.1:49362275-49362294 None:intergenic 30.0%
ATTGAATCTTAGAGTGATTC+TGG - chr7.1:49360505-49360524 None:intergenic 30.0%
CATGCAGCGAAAAAAAAAAA+AGG - chr7.1:49363572-49363591 None:intergenic 30.0%
CATGTTGAAAAGATTGAACT+TGG + chr7.1:49360566-49360585 MS.gene011032:CDS 30.0%
GATAAATTGCTTATAGGCAA+TGG - chr7.1:49364472-49364491 None:intergenic 30.0%
GATAGTGAAAATCTGATAGT+AGG + chr7.1:49362999-49363018 MS.gene011032:intron 30.0%
GTATCTGATAAATAAGCTTC+GGG + chr7.1:49362469-49362488 MS.gene011032:CDS 30.0%
GTTTCAAGATTTATCAACCA+TGG + chr7.1:49364559-49364578 MS.gene011032:CDS 30.0%
TAGAAAAAGTTTAGACGAGT+TGG + chr7.1:49361037-49361056 MS.gene011032:intron 30.0%
TATAACATTTACAACAGCAG+CGG + chr7.1:49360524-49360543 MS.gene011032:CDS 30.0%
TGGATCTAACAACTTTATGT+TGG - chr7.1:49364915-49364934 None:intergenic 30.0%
TGTTAAGAATCTCACATTGA+AGG - chr7.1:49362938-49362957 None:intergenic 30.0%
TGTTCTTGTGCTAATCATAA+TGG + chr7.1:49363768-49363787 MS.gene011032:CDS 30.0%
TTTACCCTACATGGTTAAAA+TGG - chr7.1:49364846-49364865 None:intergenic 30.0%
TTTCATACAATAACATTGGC+CGG + chr7.1:49363799-49363818 MS.gene011032:CDS 30.0%
! AAAATGTGTGACATTTTCCA+TGG - chr7.1:49361077-49361096 None:intergenic 30.0%
! AAGAGATAAAGCCTTATCAT+GGG - chr7.1:49363136-49363155 None:intergenic 30.0%
! ACTATCAGATTTTCACTATC+GGG - chr7.1:49362999-49363018 None:intergenic 30.0%
! ATAACTGATTTCCAAATGAG+GGG - chr7.1:49361331-49361350 None:intergenic 30.0%
! CTTTAGGTTCATTTAATGGA+AGG + chr7.1:49363241-49363260 MS.gene011032:intron 30.0%
! CTTTTTACCACAACTTCTAT+GGG + chr7.1:49362664-49362683 MS.gene011032:intron 30.0%
! GAAACTTTGTTTCCACATTT+AGG - chr7.1:49364043-49364062 None:intergenic 30.0%
! GTTCAATCTTTTCAACATGT+TGG - chr7.1:49360565-49360584 None:intergenic 30.0%
! GTTTTTGCTAATGTTGAGTT+AGG - chr7.1:49362861-49362880 None:intergenic 30.0%
! TCTTTTTACCACAACTTCTA+TGG + chr7.1:49362663-49362682 MS.gene011032:intron 30.0%
! TGATTTTATATCCCCTCATT+TGG + chr7.1:49361317-49361336 MS.gene011032:intron 30.0%
! TTCTTTAAGTTTGGTATGCA+AGG + chr7.1:49363388-49363407 MS.gene011032:intron 30.0%
!! GATTTGTTGATAACATACCT+TGG - chr7.1:49363295-49363314 None:intergenic 30.0%
!! GGTTAAGATATGTTTTTGTG+TGG + chr7.1:49362139-49362158 MS.gene011032:intron 30.0%
!! TTGGCTTTAGGTTCATTTAA+TGG + chr7.1:49363237-49363256 MS.gene011032:intron 30.0%
!!! AGCTTTAGGGTTTAAGTTTT+AGG - chr7.1:49362076-49362095 None:intergenic 30.0%
!!! AGTTTTTGGTTCTGAATTTC+TGG + chr7.1:49361488-49361507 MS.gene011032:intron 30.0%
!!! GGTTGGTTTTGTTGTTAAAA+TGG + chr7.1:49365315-49365334 MS.gene011032:intron 30.0%
AAACAGCTTCAATGTCATTG+TGG + chr7.1:49365591-49365610 MS.gene011032:CDS 35.0%
AAACTACCTTTCTCTTACAC+AGG + chr7.1:49364159-49364178 MS.gene011032:intron 35.0%
AAACTCTTTCTTCTTCTCCA+AGG + chr7.1:49363275-49363294 MS.gene011032:CDS 35.0%
AAATGGAAATTTAAAGGGGG+AGG - chr7.1:49364829-49364848 None:intergenic 35.0%
AAGATAGTATCATGAGGCTA+GGG - chr7.1:49362383-49362402 None:intergenic 35.0%
ACAAAGAGGAATACCTGATA+GGG - chr7.1:49364679-49364698 None:intergenic 35.0%
ACACATTGTACAAAGAGGTT+TGG - chr7.1:49364592-49364611 None:intergenic 35.0%
ACACTTCAAATGTCCAATCA+TGG - chr7.1:49362974-49362993 None:intergenic 35.0%
AGTGAAAATCTGATAGTAGG+CGG + chr7.1:49363002-49363021 MS.gene011032:intron 35.0%
ATTAGCACAAGAACATCGTT+TGG - chr7.1:49363763-49363782 None:intergenic 35.0%
ATTCATTCCCATAGAAGTTG+TGG - chr7.1:49362674-49362693 None:intergenic 35.0%
ATTGACGATAACTTCCTTCA+TGG + chr7.1:49365468-49365487 MS.gene011032:intron 35.0%
ATTGTAGAATGACCTCAAGT+CGG - chr7.1:49364084-49364103 None:intergenic 35.0%
CAATAACACACCATCATGTT+TGG - chr7.1:49364770-49364789 None:intergenic 35.0%
CATCAAACATACCATCATAG+TGG - chr7.1:49362276-49362295 None:intergenic 35.0%
GAAGGAAGTTATCGTCAATA+AGG - chr7.1:49365467-49365486 None:intergenic 35.0%
GATAAACCTGTGTAAGAGAA+AGG - chr7.1:49364168-49364187 None:intergenic 35.0%
GATTGAACTTGGAAGTAAAG+AGG + chr7.1:49360577-49360596 MS.gene011032:CDS 35.0%
GATTGTTTGCACACAATCAA+TGG + chr7.1:49364325-49364344 MS.gene011032:CDS 35.0%
GGAAACAAAGTTTCTCAACA+GGG + chr7.1:49364049-49364068 MS.gene011032:CDS 35.0%
TAAGATAGTATCATGAGGCT+AGG - chr7.1:49362384-49362403 None:intergenic 35.0%
TACAAAGAGGAATACCTGAT+AGG - chr7.1:49364680-49364699 None:intergenic 35.0%
TATCATGGGTTTATAGGTGA+TGG - chr7.1:49363122-49363141 None:intergenic 35.0%
TCACCTATAAACCCATGATA+AGG + chr7.1:49363122-49363141 MS.gene011032:intron 35.0%
TCACTTGTATAGCCATATTG+AGG + chr7.1:49362904-49362923 MS.gene011032:intron 35.0%
TCTTCTCAAAGAGTTGAACT+TGG - chr7.1:49360723-49360742 None:intergenic 35.0%
TGAAAAAAGGGACGAGTTAA+TGG + chr7.1:49364492-49364511 MS.gene011032:CDS 35.0%
TGAAATAGACCTTGTATCGA+CGG + chr7.1:49365020-49365039 MS.gene011032:intron 35.0%
TGAGAACACATTGTACAAAG+AGG - chr7.1:49364597-49364616 None:intergenic 35.0%
TGGAAACAAAGTTTCTCAAC+AGG + chr7.1:49364048-49364067 MS.gene011032:CDS 35.0%
TGGAAGTAAAGAGGAAAGTT+TGG + chr7.1:49360586-49360605 MS.gene011032:CDS 35.0%
TGGAGGATCATCAAAATCAT+TGG - chr7.1:49363453-49363472 None:intergenic 35.0%
TTGTTGCAGGTAGAGAAAAA+TGG + chr7.1:49362407-49362426 MS.gene011032:intron 35.0%
! AAGCCTTATCATGGGTTTAT+AGG - chr7.1:49363128-49363147 None:intergenic 35.0%
! AGACCAAACATTTCGCATTT+TGG - chr7.1:49362245-49362264 None:intergenic 35.0%
! CAAACATGATGGTGTGTTAT+TGG + chr7.1:49364768-49364787 MS.gene011032:intron 35.0%
! GAAGAGATAAAGCCTTATCA+TGG - chr7.1:49363137-49363156 None:intergenic 35.0%
! GGAGAAGGTTTTCATTTTCA+TGG + chr7.1:49362801-49362820 MS.gene011032:intron 35.0%
! TACTAAGAGTTCTGACAATG+AGG + chr7.1:49360445-49360464 MS.gene011032:CDS 35.0%
! TCTCATTCAAGTTCAAGAAG+TGG + chr7.1:49360752-49360771 MS.gene011032:intron 35.0%
! TCTTCATTTTCCCACTATGA+TGG + chr7.1:49362262-49362281 MS.gene011032:intron 35.0%
! TTCTAACACTCGCTTTGTTA+CGG - chr7.1:49364950-49364969 None:intergenic 35.0%
!! AGACGAGTTGGATTTTAGAT+TGG + chr7.1:49361049-49361068 MS.gene011032:intron 35.0%
!! ATTGATAACGAATACGTTCC+TGG + chr7.1:49362431-49362450 MS.gene011032:CDS 35.0%
!! CTTTGATGGACTTGACTTTA+GGG + chr7.1:49360820-49360839 MS.gene011032:intron 35.0%
!! GAAATTTTTCAGAGACGGTT+GGG + chr7.1:49364439-49364458 MS.gene011032:intron 35.0%
!! TCTTTGATGGACTTGACTTT+AGG + chr7.1:49360819-49360838 MS.gene011032:intron 35.0%
!! TGAAATTTTTCAGAGACGGT+TGG + chr7.1:49364438-49364457 MS.gene011032:intron 35.0%
!! TTTGATGGACTTGACTTTAG+GGG + chr7.1:49360821-49360840 MS.gene011032:intron 35.0%
!! TTTTCGCTGCATGCTTTATT+TGG + chr7.1:49363579-49363598 MS.gene011032:intron 35.0%
!!! GATGGTGTGTTATTGGTTTT+AGG + chr7.1:49364775-49364794 MS.gene011032:intron 35.0%
!!! GGGTTTAAGTTTTAGGACTA+AGG - chr7.1:49362069-49362088 None:intergenic 35.0%
AACCAGTTCAGAAGATGACA+TGG - chr7.1:49365393-49365412 None:intergenic 40.0%
AACCCTAGATGTTTCTCTCA+AGG - chr7.1:49360855-49360874 None:intergenic 40.0%
AATAAGACGGTAGGTATGGT+TGG + chr7.1:49365298-49365317 MS.gene011032:intron 40.0%
ACAATGACAAGACGGTGTTT+CGG + chr7.1:49365073-49365092 MS.gene011032:intron 40.0%
ACACCAATATACTCGACAAC+TGG - chr7.1:49364247-49364266 None:intergenic 40.0%
AGCAAGAATCGACACAAGAT+AGG + chr7.1:49361946-49361965 MS.gene011032:CDS 40.0%
AGGTGTGTGATACAATTGGT+TGG + chr7.1:49360897-49360916 MS.gene011032:intron 40.0%
AGTCTTGAACTCACTCTTGT+TGG - chr7.1:49360482-49360501 None:intergenic 40.0%
CACACAATCAATGGTGTAGA+TGG + chr7.1:49364334-49364353 MS.gene011032:CDS 40.0%
CAGTAATAAGACGGTAGGTA+TGG + chr7.1:49365294-49365313 MS.gene011032:intron 40.0%
CCAGCATCTATGCAATATTC+AGG - chr7.1:49364526-49364545 None:intergenic 40.0%
CCTGAATATTGCATAGATGC+TGG + chr7.1:49364523-49364542 MS.gene011032:CDS 40.0%
CCTTCTCCATTACTATCATG+CGG - chr7.1:49362789-49362808 None:intergenic 40.0%
CTAGATGGAACTTCAATGCT+TGG - chr7.1:49363705-49363724 None:intergenic 40.0%
CTTGAACTTGAATGAGAGCA+AGG - chr7.1:49360749-49360768 None:intergenic 40.0%
GAAGTTATCGTCAATAAGGG+AGG - chr7.1:49365463-49365482 None:intergenic 40.0%
GAGTGTGTAACCATAGTCAT+AGG - chr7.1:49365541-49365560 None:intergenic 40.0%
GATAGTGTGTCTGATTCTGA+TGG + chr7.1:49365561-49365580 MS.gene011032:CDS 40.0%
GCAAGAATCGACACAAGATA+GGG + chr7.1:49361947-49361966 MS.gene011032:CDS 40.0%
GCTAAGGTGTGTGATACAAT+TGG + chr7.1:49360893-49360912 MS.gene011032:intron 40.0%
GTAACAACTTCATTTGCAGC+AGG + chr7.1:49361909-49361928 MS.gene011032:intron 40.0%
GTATGCAAGGACATTAGCAA+TGG + chr7.1:49363401-49363420 MS.gene011032:CDS 40.0%
GTCCTTGAGAGAAACATCTA+GGG + chr7.1:49360850-49360869 MS.gene011032:intron 40.0%
GTTTATCGTACTCCCAAGAA+AGG + chr7.1:49364181-49364200 MS.gene011032:CDS 40.0%
TACTTCGAAGTAGTGATTCC+AGG - chr7.1:49362452-49362471 None:intergenic 40.0%
TCAATGTCATTGTGGTGCAA+AGG + chr7.1:49365599-49365618 MS.gene011032:CDS 40.0%
TCATCACCGCATGATAGTAA+TGG + chr7.1:49362780-49362799 MS.gene011032:intron 40.0%
TGCTAAAGTGGGAACATACA+AGG + chr7.1:49362496-49362515 MS.gene011032:CDS 40.0%
TGTAACAACTTCCCCTCATT+TGG + chr7.1:49361514-49361533 MS.gene011032:intron 40.0%
TGTCCTTGAGAGAAACATCT+AGG + chr7.1:49360849-49360868 MS.gene011032:intron 40.0%
TTCCATGTCATCTTCTGAAC+TGG + chr7.1:49365388-49365407 MS.gene011032:intron 40.0%
TTCTGACAATGAGGCTATGA+TGG + chr7.1:49360454-49360473 MS.gene011032:CDS 40.0%
TTGTATCACACACCTTAGCA+AGG - chr7.1:49360892-49360911 None:intergenic 40.0%
! CATGATAGTGTGATGTTACG+TGG + chr7.1:49362738-49362757 MS.gene011032:intron 40.0%
! TCTAACACTCGCTTTGTTAC+GGG - chr7.1:49364949-49364968 None:intergenic 40.0%
! TGGATTTTAGATTGGAGCCA+TGG + chr7.1:49361057-49361076 MS.gene011032:intron 40.0%
!! GGCCGGTATTGTTTTACTTT+TGG + chr7.1:49363816-49363835 MS.gene011032:intron 40.0%
!! TCCTTAAGGGTGGTTGTTTT+TGG + chr7.1:49365097-49365116 MS.gene011032:intron 40.0%
!!! CCTTAAGGGTGGTTGTTTTT+GGG + chr7.1:49365098-49365117 MS.gene011032:intron 40.0%
!!! CTCACTGTTTTTACCCTACA+TGG - chr7.1:49364855-49364874 None:intergenic 40.0%
!!! TGCATAGATGCTGGTTCTTT+TGG + chr7.1:49364532-49364551 MS.gene011032:CDS 40.0%
!!! TTGTTACCATCGCTAGCTTT+TGG + chr7.1:49365222-49365241 MS.gene011032:intron 40.0%
AAAATCTGATAGTAGGCGGC+TGG + chr7.1:49363006-49363025 MS.gene011032:intron 45.0%
AAGAGGAATACCTGATAGGG+AGG - chr7.1:49364676-49364695 None:intergenic 45.0%
ACATGGGACTTTATCCCATC+AGG + chr7.1:49364217-49364236 MS.gene011032:CDS 45.0%
ACGGTGTTTCGGTTCCTTAA+GGG + chr7.1:49365084-49365103 MS.gene011032:intron 45.0%
AGAAGACATACCTCCCTATC+AGG + chr7.1:49364663-49364682 MS.gene011032:CDS 45.0%
ATCGTACTCCCAAGAAAGGT+TGG + chr7.1:49364185-49364204 MS.gene011032:CDS 45.0%
CAATCTTCGTTGCCTTGCTA+AGG + chr7.1:49360877-49360896 MS.gene011032:intron 45.0%
CAATGGTGTAGATGGAAGAG+AGG + chr7.1:49364342-49364361 MS.gene011032:CDS 45.0%
CAGGAACTCACCTATGACTA+TGG + chr7.1:49365528-49365547 MS.gene011032:intron 45.0%
CCCAAAAACAACCACCCTTA+AGG - chr7.1:49365101-49365120 None:intergenic 45.0%
CTAAGTAGAGACGATGAGCT+AGG + chr7.1:49364268-49364287 MS.gene011032:CDS 45.0%
CTTAGCAAGGCAACGAAGAT+TGG - chr7.1:49360879-49360898 None:intergenic 45.0%
CTTTACACGGTGCCCAATTT+AGG + chr7.1:49365189-49365208 MS.gene011032:intron 45.0%
GCACCAGTTGTCGAGTATAT+TGG + chr7.1:49364241-49364260 MS.gene011032:CDS 45.0%
TCGTACTCCCAAGAAAGGTT+GGG + chr7.1:49364186-49364205 MS.gene011032:CDS 45.0%
TGAAGTTCCATCTAGTGCTG+CGG + chr7.1:49363710-49363729 MS.gene011032:CDS 45.0%
TGTTACGGGGGAAATACATC+TGG - chr7.1:49364935-49364954 None:intergenic 45.0%
! AATTGGGCACCGTGTAAAGA+CGG - chr7.1:49365188-49365207 None:intergenic 45.0%
! AGAGGTTTGGTTCACATCCA+TGG - chr7.1:49364579-49364598 None:intergenic 45.0%
! AGCACTACACGAGTTAGTCT+AGG - chr7.1:49364634-49364653 None:intergenic 45.0%
! CCGCATGATAGTAATGGAGA+AGG + chr7.1:49362786-49362805 MS.gene011032:intron 45.0%
! CTAACACTCGCTTTGTTACG+GGG - chr7.1:49364948-49364967 None:intergenic 45.0%
! GAGTTAGTCTAGGATCTCTG+TGG - chr7.1:49364624-49364643 None:intergenic 45.0%
! TAACACTCGCTTTGTTACGG+GGG - chr7.1:49364947-49364966 None:intergenic 45.0%
!! CTTCGGGAACTTGCTAAAGT+GGG + chr7.1:49362485-49362504 MS.gene011032:CDS 45.0%
!!! AAGGGTGGTTGTTTTTGGGT+TGG + chr7.1:49365102-49365121 MS.gene011032:intron 45.0%
!!! GGTTGTTTTTGGGTTGGCTT+CGG + chr7.1:49365108-49365127 MS.gene011032:intron 45.0%
AAGGTTGGGCGGTAAGAACA+TGG + chr7.1:49364200-49364219 MS.gene011032:CDS 50.0%
AGGTTGGGCGGTAAGAACAT+GGG + chr7.1:49364201-49364220 MS.gene011032:CDS 50.0%
CATTCGACCACGATGTCTAG+AGG - chr7.1:49363998-49364017 None:intergenic 50.0%
CTAGACATCGTGGTCGAATG+TGG + chr7.1:49363998-49364017 MS.gene011032:CDS 50.0%
CTGGGTGTTCCGTCTTTACA+CGG + chr7.1:49365176-49365195 MS.gene011032:intron 50.0%
CTTACCGCCCAACCTTTCTT+GGG - chr7.1:49364196-49364215 None:intergenic 50.0%
GAAGTTCCATCTAGTGCTGC+GGG + chr7.1:49363711-49363730 MS.gene011032:CDS 50.0%
GACGGTGTTTCGGTTCCTTA+AGG + chr7.1:49365083-49365102 MS.gene011032:intron 50.0%
GTAGGCGGCTGGATGAATAT+TGG + chr7.1:49363017-49363036 MS.gene011032:intron 50.0%
GTCCAATCATGGACGTGAGA+GGG - chr7.1:49362963-49362982 None:intergenic 50.0%
GTGTTTCGGTTCCTTAAGGG+TGG + chr7.1:49365087-49365106 MS.gene011032:intron 50.0%
TACTCCCAAGAAAGGTTGGG+CGG + chr7.1:49364189-49364208 MS.gene011032:CDS 50.0%
TCTTACCGCCCAACCTTTCT+TGG - chr7.1:49364197-49364216 None:intergenic 50.0%
TGTCCAATCATGGACGTGAG+AGG - chr7.1:49362964-49362983 None:intergenic 50.0%
TGTGGATGCGGACCTAAATG+TGG + chr7.1:49364028-49364047 MS.gene011032:CDS 50.0%
TTAGGTCCGCATCCACATTG+CGG - chr7.1:49364025-49364044 None:intergenic 50.0%
! CGGTAAGTACCGTCGATACA+AGG - chr7.1:49365032-49365051 None:intergenic 50.0%
!! GATGAGCTAGGAAGTGCCAA+CGG + chr7.1:49364280-49364299 MS.gene011032:CDS 50.0%
!! GCTTCGGGAACTTGCTAAAG+TGG + chr7.1:49362484-49362503 MS.gene011032:CDS 50.0%
!! GGGCTTAACTTACCGACTTG+AGG + chr7.1:49364069-49364088 MS.gene011032:CDS 50.0%
CACCCTCTCACGTCCATGAT+TGG + chr7.1:49362958-49362977 MS.gene011032:intron 55.0%
CGACAACTGGTGCACCTGAT+GGG - chr7.1:49364234-49364253 None:intergenic 55.0%
GACGAGCCAAAAGCTAGCGA+TGG - chr7.1:49365231-49365250 None:intergenic 55.0%
GATCGAGCCTCTAGACATCG+TGG + chr7.1:49363988-49364007 MS.gene011032:CDS 55.0%
GCTGCGGGATGCAATTGCAA+GGG + chr7.1:49363726-49363745 MS.gene011032:CDS 55.0%
GCTTTACCTGTGGGTGCAAC+TGG - chr7.1:49363473-49363492 None:intergenic 55.0%
GTCGAATGTGGACCGCAATG+TGG + chr7.1:49364010-49364029 MS.gene011032:CDS 55.0%
TCGACAACTGGTGCACCTGA+TGG - chr7.1:49364235-49364254 None:intergenic 55.0%
TGCTGCGGGATGCAATTGCA+AGG + chr7.1:49363725-49363744 MS.gene011032:CDS 55.0%
TGTGGACCGCAATGTGGATG+CGG + chr7.1:49364016-49364035 MS.gene011032:CDS 55.0%
TTACCTGTGGGTGCAACTGG+AGG - chr7.1:49363470-49363489 None:intergenic 55.0%
TTGCATCCCGCAGCACTAGA+TGG - chr7.1:49363720-49363739 None:intergenic 55.0%
!!! GCTTTTGGCTCGTCTTGTGC+CGG + chr7.1:49365237-49365256 MS.gene011032:intron 55.0%
GATCCTCCAGTTGCACCCAC+AGG + chr7.1:49363464-49363483 MS.gene011032:CDS 60.0%
!! GGGTTGGCTTCGGTGCTTAG+TGG + chr7.1:49365118-49365137 MS.gene011032:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 49360437 49365644 49360437 ID=MS.gene011032
chr7.1 mRNA 49360437 49365644 49360437 ID=MS.gene011032.t1;Parent=MS.gene011032
chr7.1 exon 49360437 49360622 49360437 ID=MS.gene011032.t1.exon1;Parent=MS.gene011032.t1
chr7.1 CDS 49360437 49360622 49360437 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49361928 49362002 49361928 ID=MS.gene011032.t1.exon2;Parent=MS.gene011032.t1
chr7.1 CDS 49361928 49362002 49361928 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49362416 49362517 49362416 ID=MS.gene011032.t1.exon3;Parent=MS.gene011032.t1
chr7.1 CDS 49362416 49362517 49362416 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49363247 49363296 49363247 ID=MS.gene011032.t1.exon4;Parent=MS.gene011032.t1
chr7.1 CDS 49363247 49363296 49363247 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49363397 49363485 49363397 ID=MS.gene011032.t1.exon5;Parent=MS.gene011032.t1
chr7.1 CDS 49363397 49363485 49363397 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49363670 49363820 49363670 ID=MS.gene011032.t1.exon6;Parent=MS.gene011032.t1
chr7.1 CDS 49363670 49363820 49363670 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49363985 49364090 49363985 ID=MS.gene011032.t1.exon7;Parent=MS.gene011032.t1
chr7.1 CDS 49363985 49364090 49363985 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49364181 49364363 49364181 ID=MS.gene011032.t1.exon8;Parent=MS.gene011032.t1
chr7.1 CDS 49364181 49364363 49364181 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49364451 49364684 49364451 ID=MS.gene011032.t1.exon9;Parent=MS.gene011032.t1
chr7.1 CDS 49364451 49364684 49364451 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
chr7.1 exon 49365531 49365644 49365531 ID=MS.gene011032.t1.exon10;Parent=MS.gene011032.t1
chr7.1 CDS 49365531 49365644 49365531 ID=cds.MS.gene011032.t1;Parent=MS.gene011032.t1
Gene Sequence

>MS.gene011032

ATGGAGGCTACTAAGAGTTCTGACAATGAGGCTATGATGGTACCAACAAGAGTGAGTTCAAGACTCCAGAATCACTCTAAGATTCAATATAACATTTACAACAGCAGCGGCGACAAAGTATTTGCCCAACATGTTGAAAAGATTGAACTTGGAAGTAAAGAGGAAAGTTTGGTATCAACATCAAAGGTTTGTTCACAACTTCAAAATCGAAACGAAATTCCAGATGATATTAACAATAAGAGAGGCATGATCAGTATTGAAGACAATATTGTCGAGAAGAGAACCAAGTTCAACTCTTTGAGAAGAAAACCTTGCTCTCATTCAAGTTCAAGAAGTGGTTCAAGAATCTCTCGTTCAAGATCAACAAGCAATGATTCACTTGTCTTTGATGGACTTGACTTTAGGGGCATTTTGTCCTTGAGAGAAACATCTAGGGTTGCCAATCTTCGTTGCCTTGCTAAGGTGTGTGATACAATTGGTTGGTTTTTACTTCATTTATTCTTCTCTTGTTTATTTTGATTCCAATGTTGCACATTATTTATGTTGGTATTTTAGTAATTATTTTCTGAAAGTATAATTAATTTTTATTTCTTATTATTTTAGAAAAAGTTTAGACGAGTTGGATTTTAGATTGGAGCCATGGAAAATGTCACACATTTTTTCTTAAGTAATTTATACATCTTAAGTAAGATGTATAAATATGGTGCAAAACTAATTTATATTATCTAAAGTAATTTCTTAATCGTATTTATACAATTATGAGGTAGTTTAAGCTTATATAACTTGAGTAAAAAAAAGGAGTATATATCACTTTCTGAAAAAGAAATTACATGATATCTTATTGAATGGGCCTAAACAAATTACTTGAGATTTGTTATATTGATTTTATATCCCCTCATTTGGAAATCAGTTATTTAGTGATTCATATTTCAAATTAACGTATTAGTTTCTTTCTTTATGGTTGTGTATTAATTTCAATATTTAGTTCAAAACCTAGAGTTAATTTCTTAGTTGAATACTTAAATTCATTTGTAACTTAATTGATTTTATTAGTTTTTGGTTCTGAATTTCTGGTAGTGTAACAACTTCCCCTCATTTGGAAATCAGTTATTTAGTGATTCATATTTCAAATTAACGTATTAGTTTCTTTCTTTATGGTTGTGTATTAATTTCAATATTTAGTTCAAAACCTAGAGTTAATTTCTTAGTTGAATACTTAAATTCATTTGTAACTTAATTGATTTTATTAGTTTTTGGTTCTGAATTTCTGGTAGTGTAACAACTTCCCCTCATTTGGAAATCAGTTATTTAGTGATTCATATTTCAAATTAACGTATTAGTTTCTTTCTTTATGGTTGTGTATTAATTTCAATATTTAGTTCAAAACCTAGAGTTAATTTCTTAGTTGAATACTTAAATTCATTTGTAACTTAATTGATTTTATTAGTTTTTGGTTCTGAATTTCTGGTAGTGTAACAACTTCATTTGCAGCAGGAAGAGAAGAATCAAAGCAAGAATCGACACAAGATAGGGAAAAATATTGCAACACTTTTGAGGGCAAGCAATGTGAGCCTTTTGACTTAGCGTTAAATAAAACATGCTTTTCCTTGTTTTTTGTTTTTATATATTCCTTAGTCCTAAAACTTAAACCCTAAAGCTTAAATAAAACATGTGTTAGCATTATATCATGATTTTAAATCGCGGTTAAGATATGTTTTTGTGTGGGTATTTACTAAAAATTGTGAAGTCTATTAATATGATGCCATTAATTTTCATTGTATTTTCACTAATTGTTTACATGCAAACCAAAATGCGAAATGTTTGGTCTTCATTTTCCCACTATGATGGTATGTTTGATGAAAATGTAATCGAATCAATTAGTCAATTTCTAGCTTCCAATTAATTAGGAGTAACTTTAGTTCTAAACTTCTATGCTTCAGCTGCCCTAGCCTCATGATACTATCTTAATTTTGTTGCAGGTAGAGAAAAATGGCATTGATAACGAATACGTTCCTGGAATCACTACTTCGAAGTATCTGATAAATAAGCTTCGGGAACTTGCTAAAGTGGGAACATACAAGGTTGTATATATTACGTTTATTTGATTTCTTTTTCATATCTATGACTCAATGTCAATGATATTTCACTCTTTAGTCTCATATATGTGAGATGATTAGTTTATATAGCATCCTTTGTACTTTTGTTCAATCTTTCTCTTTTGTTCTCTCTTTTTACCACAACTTCTATGGGAATGAATTCTCTCTATTTTTTTCTTCATAATCATAGTTTTTGAAATATAAACATGATAGTGTGATGTTACGTGGAATCCAAACATTTTCTATATCATCACCGCATGATAGTAATGGAGAAGGTTTTCATTTTCATGGTATTATTTGTGTTTGTGTTAGAATTTGGGTTAAGCCTAACTCAACATTAGCAAAAACAATTTATAAGGTGATGATTGTGTTCACTTGTATAGCCATATTGAGGTCTTATATCCTTCAATGTGAGATTCTTAACACACCCTCTCACGTCCATGATTGGACATTTGAAGTGTGACCCGATAGTGAAAATCTGATAGTAGGCGGCTGGATGAATATTGGACCGACTTTAATATCTTATTAGAATTTTGGGTTGGATCTAACTCAACCTTACAAAATCAACTTGTAAAGGTGAAGATTTCCATCACCTATAAACCCATGATAAGGCTTTATCTCTTCCAATCAAGACTCTTAACATTATGTTTACATTTGATATATATCATTTTGCTCCACTTATATGTCGTATTCTAATATTCAATTTGGCTTTAGGTTCATTTAATGGAAGGGCAAGTCTCTAAAACTCTTTCTTCTTCTCCAAGGTATGTTATCAACAAATCTCTTCAGAAATACAGTGTTATTGAGTTCTTTTGATATACATAAATATCTGTAATTGAGTTACAAGAATATTGTTTCTTTAAGTTTGGTATGCAAGGACATTAGCAATGGACAAGAAGCTATCAGCATTATTGCAACCAATGATTTTGATGATCCTCCAGTTGCACCCACAGGTAAAGCAAAAAAATATTAGATGGAAATGAACCCTTTTTTGAAAATGAAAAAACAAATGCAAATCCAATATATGTCCCTTTTTCCTTTTTTTTTTTTCGCTGCATGCTTTATTTGGTGAAGTGCATATGTTTTCAAGTCACTCTCTTTTGATACAGAAAATTGCATTATGTTTTAAAATTTTAGGTTTTGAATACATTACATCAAACAAATTTTCACCAAGCATTGAAGTTCCATCTAGTGCTGCGGGATGCAATTGCAAGGGAAGTTGTAGAACCAAACGATGTTCTTGTGCTAATCATAATGGCTCCGAGTTTTCATACAATAACATTGGCCGGTATTGTTTTACTTTTGGATTTGTTTTTTTTCTTGTCATGGTTAACACAAAGTTAGATCTTACGTTGTAAATAAATATAATTTCACTTGTTTTAAATAGTTTGATGTTCAACACTCTTAAAATTAAGTTCTTAAACTATCAAACTTAATCAATTATTTTGTTAGATTGATCGAGCCTCTAGACATCGTGGTCGAATGTGGACCGCAATGTGGATGCGGACCTAAATGTGGAAACAAAGTTTCTCAACAGGGCTTAACTTACCGACTTGAGGTCATTCTACAATTTACTCAAGTTTCTACACTTGTTTACCATTGATGTTTATAATATGTAAACTAACTAAACTACCTTTCTCTTACACAGGTTTATCGTACTCCCAAGAAAGGTTGGGCGGTAAGAACATGGGACTTTATCCCATCAGGTGCACCAGTTGTCGAGTATATTGGTGTACTAAGTAGAGACGATGAGCTAGGAAGTGCCAACGGAAATGATTATATTTTCGATATTGATTGTTTGCACACAATCAATGGTGTAGATGGAAGAGAGGTAAGAATGCAAAATTTTTATTATTGTAAAATATGTATGAAATTTAGGGTGCTATTAATATAGATTTCTTTCATTGAAATTTTTCAGAGACGGTTGGGTAATGTACCATTGCCTATAAGCAATTTATCTGAAAAAAGGGACGAGTTAATGGAAAAAGATCCTGAATATTGCATAGATGCTGGTTCTTTTGGAAATGTTTCAAGATTTATCAACCATGGATGTGAACCAAACCTCTTTGTACAATGTGTTCTCAGCAGCCACAGAGATCCTAGACTAACTCGTGTAGTGCTATTTGCAGCAGAAGACATACCTCCCTATCAGGTATTCCTCTTTGTAATAAGGATTTTAAGAATTCATTGTGTTATCATCTTTTTTATTTGATAGCTCACAATGTTTTTTTTTTCCAAACATGATGGTGTGTTATTGGTTTTAGGAATTTTGTGATTGATTTTAGATGATAATCCTCCCCCTTTAAATTTCCATTTTAACCATGTAGGGTAAAAACAGTGAGAAAAAAATATAAGTCACATCACTTTTTTGAAATGCGTCCAACATAAAGTTGTTAGATCCAGATGTATTTCCCCCGTAACAAAGCGAGTGTTAGAAAAAATGTGTTAATATGAGTATTGCTAATATTATTCTTAATTGAATTGAAATGAAATAGACCTTGTATCGACGGTACTTACCGTCATCCATATCGATTATATTAACAATGACAAGACGGTGTTTCGGTTCCTTAAGGGTGGTTGTTTTTGGGTTGGCTTCGGTGCTTAGTGGTTTTTTGTGTTTGTTGTAGTTTGTGTTTATAGTTACTGGGTGTTCCGTCTTTACACGGTGCCCAATTTAGGTGTGTATTATTTGTTACCATCGCTAGCTTTTGGCTCGTCTTGTGCCGGCTATGTGTTAATATATTTACAGATAAAAAAATAACAGTAATAAGACGGTAGGTATGGTTGGTTTTGTTGTTAAAATGGGACTAGAAATTTTATTTTGAAAGGACTCTTGAGATATTTTTTTCAACATCTTCCATGTCATCTTCTGAACTGGTTTAATTAGTTCAATTTAATTAATTATTTTCATACATTTTGGGCACATACCTCCCTTATTGACGATAACTTCCTTCATGGTAAAAATTTAATAAACAATTGGTATTTGCTAATTTAACAGGAACTCACCTATGACTATGGTTACACACTCGATAGTGTGTCTGATTCTGATGGAAAAATCAAACAGCTTCAATGTCATTGTGGTGCAAAGGAATGTCGTAAGCGCTTGTACTAG
Protein sequence

>MS.gene011032.t1

MEATKSSDNEAMMVPTRVSSRLQNHSKIQYNIYNSSGDKVFAQHVEKIELGSKEESLVSTSKQEEKNQSKNRHKIGKNIATLLRASNVEKNGIDNEYVPGITTSKYLINKLRELAKVGTYKVHLMEGQVSKTLSSSPSLVCKDISNGQEAISIIATNDFDDPPVAPTGFEYITSNKFSPSIEVPSSAAGCNCKGSCRTKRCSCANHNGSEFSYNNIGRLIEPLDIVVECGPQCGCGPKCGNKVSQQGLTYRLEVYRTPKKGWAVRTWDFIPSGAPVVEYIGVLSRDDELGSANGNDYIFDIDCLHTINGVDGRERRLGNVPLPISNLSEKRDELMEKDPEYCIDAGSFGNVSRFINHGCEPNLFVQCVLSSHRDPRLTRVVLFAAEDIPPYQELTYDYGYTLDSVSDSDGKIKQLQCHCGAKECRKRLY