Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011125.t1 | XP_013444240.1 | 96.8 | 431 | 10 | 2 | 1 | 428 | 1 | 430 | 5.40E-233 | 816.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011125.t1 | Q8S3D2 | 47.5 | 318 | 123 | 12 | 110 | 418 | 72 | 354 | 5.2e-51 | 203.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011125.t1 | A0A072TLG8 | 96.8 | 431 | 10 | 2 | 1 | 428 | 1 | 430 | 3.9e-233 | 816.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene011125.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011125.t1 | MTR_8g015450 | 96.752 | 431 | 10 | 2 | 1 | 428 | 1 | 430 | 0.0 | 860 |
MS.gene011125.t1 | MTR_2g100490 | 49.127 | 458 | 111 | 21 | 1 | 416 | 1 | 378 | 1.10e-96 | 295 |
MS.gene011125.t1 | MTR_3g101810 | 46.528 | 144 | 59 | 2 | 271 | 400 | 103 | 242 | 4.12e-36 | 134 |
MS.gene011125.t1 | MTR_8g093500 | 64.948 | 97 | 28 | 2 | 298 | 393 | 87 | 178 | 8.36e-36 | 133 |
MS.gene011125.t1 | MTR_5g017210 | 62.626 | 99 | 33 | 1 | 297 | 395 | 109 | 203 | 1.19e-27 | 110 |
MS.gene011125.t1 | MTR_7g069590 | 56.923 | 65 | 28 | 0 | 335 | 399 | 32 | 96 | 1.01e-19 | 85.9 |
MS.gene011125.t1 | MTR_5g079500 | 60.714 | 56 | 22 | 0 | 336 | 391 | 225 | 280 | 7.43e-17 | 81.3 |
MS.gene011125.t1 | MTR_1g018090 | 60.714 | 56 | 22 | 0 | 338 | 393 | 283 | 338 | 7.86e-17 | 82.0 |
MS.gene011125.t1 | MTR_1g106460 | 48.000 | 75 | 39 | 0 | 319 | 393 | 228 | 302 | 9.02e-16 | 78.6 |
MS.gene011125.t1 | MTR_5g005110 | 53.448 | 58 | 27 | 0 | 336 | 393 | 231 | 288 | 3.25e-15 | 76.6 |
MS.gene011125.t1 | MTR_1g106470 | 53.448 | 58 | 27 | 0 | 336 | 393 | 203 | 260 | 8.14e-15 | 75.1 |
MS.gene011125.t1 | MTR_3g103030 | 49.231 | 65 | 33 | 0 | 329 | 393 | 229 | 293 | 2.26e-14 | 73.9 |
MS.gene011125.t1 | MTR_1g060700 | 48.649 | 74 | 36 | 1 | 321 | 394 | 341 | 412 | 7.09e-14 | 73.6 |
MS.gene011125.t1 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 336 | 391 | 206 | 261 | 1.52e-13 | 72.4 |
MS.gene011125.t1 | MTR_4g131160 | 55.357 | 56 | 25 | 0 | 336 | 391 | 203 | 258 | 1.59e-13 | 72.4 |
MS.gene011125.t1 | MTR_2g067000 | 47.887 | 71 | 33 | 1 | 324 | 394 | 156 | 222 | 1.60e-13 | 71.2 |
MS.gene011125.t1 | MTR_1g080890 | 55.357 | 56 | 25 | 0 | 336 | 391 | 200 | 255 | 3.00e-13 | 71.2 |
MS.gene011125.t1 | MTR_1g106480 | 50.980 | 51 | 25 | 0 | 341 | 391 | 81 | 131 | 2.56e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011125.t1 | AT3G21330 | 48.428 | 318 | 123 | 12 | 110 | 416 | 72 | 359 | 1.33e-70 | 228 |
MS.gene011125.t1 | AT4G00120 | 54.386 | 114 | 45 | 3 | 301 | 413 | 88 | 195 | 2.98e-31 | 119 |
MS.gene011125.t1 | AT3G50330 | 62.105 | 95 | 32 | 1 | 298 | 392 | 92 | 182 | 1.26e-25 | 104 |
MS.gene011125.t1 | AT5G09750 | 65.263 | 95 | 27 | 2 | 298 | 391 | 92 | 181 | 1.87e-25 | 103 |
MS.gene011125.t1 | AT5G67060 | 61.053 | 95 | 33 | 1 | 298 | 392 | 83 | 173 | 2.18e-25 | 103 |
MS.gene011125.t1 | AT5G67060 | 61.053 | 95 | 33 | 1 | 298 | 392 | 95 | 185 | 3.06e-25 | 103 |
MS.gene011125.t1 | AT5G01305 | 59.677 | 62 | 25 | 0 | 327 | 388 | 35 | 96 | 1.57e-19 | 85.9 |
MS.gene011125.t1 | AT5G43175 | 47.059 | 68 | 36 | 0 | 326 | 393 | 129 | 196 | 6.60e-16 | 77.0 |
MS.gene011125.t1 | AT5G37800 | 53.846 | 65 | 30 | 0 | 327 | 391 | 199 | 263 | 7.94e-16 | 78.2 |
MS.gene011125.t1 | AT1G66470 | 50.000 | 68 | 34 | 0 | 324 | 391 | 190 | 257 | 1.00e-15 | 77.8 |
MS.gene011125.t1 | AT4G33880 | 51.562 | 64 | 31 | 0 | 330 | 393 | 267 | 330 | 1.27e-15 | 78.2 |
MS.gene011125.t1 | AT2G14760 | 51.562 | 64 | 31 | 0 | 330 | 393 | 238 | 301 | 1.52e-15 | 77.8 |
MS.gene011125.t1 | AT4G30980 | 49.367 | 79 | 37 | 2 | 325 | 400 | 125 | 203 | 5.52e-15 | 75.9 |
MS.gene011125.t1 | AT2G24260 | 57.143 | 56 | 24 | 0 | 336 | 391 | 42 | 97 | 9.26e-15 | 74.3 |
MS.gene011125.t1 | AT4G30980 | 49.367 | 79 | 37 | 2 | 325 | 400 | 173 | 251 | 1.12e-14 | 75.5 |
MS.gene011125.t1 | AT1G27740 | 47.059 | 68 | 36 | 0 | 326 | 393 | 164 | 231 | 1.43e-14 | 73.9 |
MS.gene011125.t1 | AT2G24260 | 57.143 | 56 | 24 | 0 | 336 | 391 | 145 | 200 | 2.39e-14 | 74.3 |
MS.gene011125.t1 | AT5G58010 | 41.111 | 90 | 44 | 2 | 323 | 403 | 92 | 181 | 6.59e-14 | 72.4 |
MS.gene011125.t1 | AT2G14760 | 42.857 | 77 | 31 | 1 | 330 | 393 | 238 | 314 | 2.23e-12 | 68.2 |
Find 61 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTTGTGCTATTGCTTC+TGG | 0.163364 | 8.3:-73452267 | None:intergenic |
AAAGAATAAGTGAAAGAATT+AGG | 0.176959 | 8.3:+73452430 | MS.gene011125:CDS |
GCATTTAGACCAGTGAATTT+TGG | 0.189702 | 8.3:+73452312 | MS.gene011125:CDS |
TATCCATGGATGGTCTAAAT+TGG | 0.204516 | 8.3:+73451380 | None:intergenic |
CAACACATTGATGATGAATT+TGG | 0.223534 | 8.3:-73452219 | None:intergenic |
TGAAATGATTGAGGTATTAA+AGG | 0.270091 | 8.3:-73451634 | None:intergenic |
GTTAAGGCACTTGAAAGTTT+AGG | 0.322532 | 8.3:+73452546 | MS.gene011125:CDS |
AAGAATAAGTGAAAGAATTA+GGG | 0.351830 | 8.3:+73452431 | MS.gene011125:CDS |
GAGATGCATAAAGTTCAAAT+TGG | 0.386265 | 8.3:+73451502 | MS.gene011125:CDS |
TGTACCTGGTGGAAGCAAAA+TGG | 0.387485 | 8.3:+73452467 | MS.gene011125:CDS |
ATCTTAACATTCTTCCTCTT+AGG | 0.391471 | 8.3:-73452366 | None:intergenic |
TGTCTTGCAGCAACAGTTTG+TGG | 0.403895 | 8.3:-73452399 | None:intergenic |
CAAGGTCCCTTATCACATCT+TGG | 0.412458 | 8.3:-73452171 | None:intergenic |
TGGTGGGCCATGTTGAAATC+TGG | 0.417693 | 8.3:-73451691 | None:intergenic |
AAAGAGAAAGCAATACTAGT+TGG | 0.418809 | 8.3:-73452597 | None:intergenic |
GAGTGAGGATTATGATTACT+AGG | 0.423589 | 8.3:-73452639 | None:intergenic |
CATAATTCTTCACCTGTTGA+AGG | 0.428854 | 8.3:+73452105 | MS.gene011125:CDS |
CTGTTGCTGCAAGACATAGA+AGG | 0.446002 | 8.3:+73452406 | MS.gene011125:CDS |
ATCCATGGATGGTCTAAATT+GGG | 0.452946 | 8.3:+73451381 | None:intergenic |
TGTTGAGTACTCCACAAGAT+TGG | 0.454815 | 8.3:-73451430 | None:intergenic |
AGTCTAAAGCCACCTTCAAC+AGG | 0.457555 | 8.3:-73452117 | None:intergenic |
TAAAGGTTCTTCTCTCCAGC+TGG | 0.468965 | 8.3:-73451617 | None:intergenic |
ATTCTGATTGAAGGTGTGTC+TGG | 0.471321 | 8.3:-73451952 | None:intergenic |
AAATCTGGCATAATGTTGTA+AGG | 0.495981 | 8.3:-73451676 | None:intergenic |
AGGTAACAAAGTTAATGCTA+TGG | 0.507469 | 8.3:+73452566 | MS.gene011125:CDS |
TGTTGTGAAAGATTTGTGTT+TGG | 0.510255 | 8.3:-73451556 | None:intergenic |
TCTGTTGAAAATGATAATGA+TGG | 0.512969 | 8.3:+73451787 | MS.gene011125:CDS |
TAATCATAATCCTCACTCAC+AGG | 0.514322 | 8.3:+73452644 | MS.gene011125:CDS |
GTAAGGTCTACTGTCTGAAA+AGG | 0.516969 | 8.3:-73451659 | None:intergenic |
AGAAGCAATAGCACAAATGA+AGG | 0.517584 | 8.3:+73452269 | MS.gene011125:CDS |
AGTAACACAGCAACCTCCTC+AGG | 0.518382 | 8.3:+73451862 | MS.gene011125:CDS |
AGGATTATGATTACTAGGGA+TGG | 0.519072 | 8.3:-73452634 | None:intergenic |
AACAATCTCTCAAAGTTCCT+CGG | 0.520026 | 8.3:+73452038 | MS.gene011125:CDS |
TTACTAGGGATGGGAAAAGA+AGG | 0.524109 | 8.3:-73452624 | None:intergenic |
AATCAAAAGCTGGATCCAGC+TGG | 0.531706 | 8.3:+73451602 | MS.gene011125:CDS |
ATGAAAGTGAAATCAAAAGC+TGG | 0.539625 | 8.3:+73451592 | MS.gene011125:CDS |
ATCCCAATTTAGACCATCCA+TGG | 0.539878 | 8.3:-73451383 | None:intergenic |
GCACTGACAATTCTGATTGA+AGG | 0.540825 | 8.3:-73451961 | None:intergenic |
GTTTCATCAAATTCATTGAG+TGG | 0.542529 | 8.3:-73452018 | None:intergenic |
TCATCCATTCCAAAATTCAC+TGG | 0.545940 | 8.3:-73452321 | None:intergenic |
GAAAAGGACTGAAATGATTG+AGG | 0.553231 | 8.3:-73451643 | None:intergenic |
GGATTATGATTACTAGGGAT+GGG | 0.558180 | 8.3:-73452633 | None:intergenic |
AAGAGAACACACCAATCTTG+TGG | 0.562304 | 8.3:+73451419 | MS.gene011125:CDS |
ACTATCAGTTTCACCTGAGG+AGG | 0.566828 | 8.3:-73451875 | None:intergenic |
GTCAGTGCTACAGATGGTAC+CGG | 0.569310 | 8.3:+73451976 | MS.gene011125:CDS |
AATTCTTCACCTGTTGAAGG+TGG | 0.574829 | 8.3:+73452108 | MS.gene011125:CDS |
AGTACTCAACAATTTGAAGA+AGG | 0.576847 | 8.3:+73451442 | MS.gene011125:CDS |
TACTAGGGATGGGAAAAGAA+GGG | 0.586236 | 8.3:-73452623 | None:intergenic |
TGTTGCTGCAAGACATAGAA+GGG | 0.587506 | 8.3:+73452407 | MS.gene011125:CDS |
CACTGCTTCAATGCTTGATG+AGG | 0.590511 | 8.3:+73452491 | MS.gene011125:CDS |
TCATGTCAACCCTGTGAGTG+AGG | 0.610783 | 8.3:-73452654 | None:intergenic |
TAGAACATCATATCCATGGA+TGG | 0.614303 | 8.3:+73451370 | None:intergenic |
TGGATGGATGTATTGATCCG+AGG | 0.618195 | 8.3:-73452055 | None:intergenic |
AATCATAATCCTCACTCACA+GGG | 0.622444 | 8.3:+73452645 | MS.gene011125:CDS |
ATGGATGGTCTAAATTGGGA+TGG | 0.624739 | 8.3:+73451385 | MS.gene011125:CDS |
AGTGAGGATTATGATTACTA+GGG | 0.626305 | 8.3:-73452638 | None:intergenic |
AGAATTGTCAGTGCTACAGA+TGG | 0.636327 | 8.3:+73451970 | MS.gene011125:CDS |
AAATTGATATTAGTTGAACA+AGG | 0.637098 | 8.3:-73452189 | None:intergenic |
CATTATGCCAGATTTCAACA+TGG | 0.655208 | 8.3:+73451684 | MS.gene011125:CDS |
ATTACTATCAGTTTCACCTG+AGG | 0.681052 | 8.3:-73451878 | None:intergenic |
TTGCAAAAGATTGTACCTGG+TGG | 0.687101 | 8.3:+73452456 | MS.gene011125:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CAAATTATCTAAAGTTTTTA+AGG | + | chr8.3:73452517-73452536 | MS.gene011125:CDS | 15.0% |
!! | AAAGAATAAGTGAAAGAATT+AGG | + | chr8.3:73452430-73452449 | MS.gene011125:CDS | 20.0% |
!! | AAATTGATATTAGTTGAACA+AGG | - | chr8.3:73452192-73452211 | None:intergenic | 20.0% |
!! | AAGAATAAGTGAAAGAATTA+GGG | + | chr8.3:73452431-73452450 | MS.gene011125:CDS | 20.0% |
! | AAAAAACCAAGATGTGATAA+GGG | + | chr8.3:73452165-73452184 | MS.gene011125:CDS | 25.0% |
! | TAATTGAAAAAAAGCCTAAG+AGG | + | chr8.3:73452352-73452371 | MS.gene011125:CDS | 25.0% |
!! | TCTGTTGAAAATGATAATGA+TGG | + | chr8.3:73451787-73451806 | MS.gene011125:CDS | 25.0% |
!! | TGAAATGATTGAGGTATTAA+AGG | - | chr8.3:73451637-73451656 | None:intergenic | 25.0% |
AAAGAGAAAGCAATACTAGT+TGG | - | chr8.3:73452600-73452619 | None:intergenic | 30.0% | |
AAATCTGGCATAATGTTGTA+AGG | - | chr8.3:73451679-73451698 | None:intergenic | 30.0% | |
AGGTAACAAAGTTAATGCTA+TGG | + | chr8.3:73452566-73452585 | MS.gene011125:CDS | 30.0% | |
AGTACTCAACAATTTGAAGA+AGG | + | chr8.3:73451442-73451461 | MS.gene011125:CDS | 30.0% | |
AGTGAGGATTATGATTACTA+GGG | - | chr8.3:73452641-73452660 | None:intergenic | 30.0% | |
ATCTTAACATTCTTCCTCTT+AGG | - | chr8.3:73452369-73452388 | None:intergenic | 30.0% | |
ATGAAAGTGAAATCAAAAGC+TGG | + | chr8.3:73451592-73451611 | MS.gene011125:CDS | 30.0% | |
CAAAAAACCAAGATGTGATA+AGG | + | chr8.3:73452164-73452183 | MS.gene011125:CDS | 30.0% | |
GAGATGCATAAAGTTCAAAT+TGG | + | chr8.3:73451502-73451521 | MS.gene011125:CDS | 30.0% | |
GTTTCATCAAATTCATTGAG+TGG | - | chr8.3:73452021-73452040 | None:intergenic | 30.0% | |
TGTTGTGAAAGATTTGTGTT+TGG | - | chr8.3:73451559-73451578 | None:intergenic | 30.0% | |
TTTCTGACTGCAAAAACTTA+TGG | + | chr8.3:73451824-73451843 | MS.gene011125:CDS | 30.0% | |
!! | ACACTGAATGTTTTTGTTTC+CGG | - | chr8.3:73451998-73452017 | None:intergenic | 30.0% |
!! | AGTTGTTGAGTTTTTGTTGT+TGG | - | chr8.3:73451714-73451733 | None:intergenic | 30.0% |
!! | ATTGTATTGCTTTTCTTGGA+TGG | - | chr8.3:73452074-73452093 | None:intergenic | 30.0% |
!! | CAACACATTGATGATGAATT+TGG | - | chr8.3:73452222-73452241 | None:intergenic | 30.0% |
!! | CTTGATTGTATTGCTTTTCT+TGG | - | chr8.3:73452078-73452097 | None:intergenic | 30.0% |
!! | TCTTTTGATTGTTTGCTTTC+AGG | + | chr8.3:73451742-73451761 | MS.gene011125:CDS | 30.0% |
!!! | CATCTTGGTTTTTTGCATTT+TGG | - | chr8.3:73452159-73452178 | None:intergenic | 30.0% |
!!! | TCTAAAGTTTTTAAGGTCAC+AGG | + | chr8.3:73452524-73452543 | MS.gene011125:CDS | 30.0% |
AACAATCTCTCAAAGTTCCT+CGG | + | chr8.3:73452038-73452057 | MS.gene011125:CDS | 35.0% | |
AATCATAATCCTCACTCACA+GGG | + | chr8.3:73452645-73452664 | MS.gene011125:CDS | 35.0% | |
AGAAGCAATAGCACAAATGA+AGG | + | chr8.3:73452269-73452288 | MS.gene011125:CDS | 35.0% | |
AGGATTATGATTACTAGGGA+TGG | - | chr8.3:73452637-73452656 | None:intergenic | 35.0% | |
ATTACTATCAGTTTCACCTG+AGG | - | chr8.3:73451881-73451900 | None:intergenic | 35.0% | |
CATAATTCTTCACCTGTTGA+AGG | + | chr8.3:73452105-73452124 | MS.gene011125:CDS | 35.0% | |
CATTATGCCAGATTTCAACA+TGG | + | chr8.3:73451684-73451703 | MS.gene011125:CDS | 35.0% | |
GAAAAGGACTGAAATGATTG+AGG | - | chr8.3:73451646-73451665 | None:intergenic | 35.0% | |
GAGTGAGGATTATGATTACT+AGG | - | chr8.3:73452642-73452661 | None:intergenic | 35.0% | |
GGATTATGATTACTAGGGAT+GGG | - | chr8.3:73452636-73452655 | None:intergenic | 35.0% | |
TAATCATAATCCTCACTCAC+AGG | + | chr8.3:73452644-73452663 | MS.gene011125:CDS | 35.0% | |
TCATCCATTCCAAAATTCAC+TGG | - | chr8.3:73452324-73452343 | None:intergenic | 35.0% | |
! | GCATTTAGACCAGTGAATTT+TGG | + | chr8.3:73452312-73452331 | MS.gene011125:CDS | 35.0% |
! | GTTAAGGCACTTGAAAGTTT+AGG | + | chr8.3:73452546-73452565 | MS.gene011125:CDS | 35.0% |
! | GTTTTGCAAAAGATTGTACC+TGG | + | chr8.3:73452453-73452472 | MS.gene011125:CDS | 35.0% |
! | TTCATTTGTGCTATTGCTTC+TGG | - | chr8.3:73452270-73452289 | None:intergenic | 35.0% |
!! | TAGACCAGTGAATTTTGGAA+TGG | + | chr8.3:73452317-73452336 | MS.gene011125:CDS | 35.0% |
!!! | CTTGGTTTTTTGCATTTTGG+TGG | - | chr8.3:73452156-73452175 | None:intergenic | 35.0% |
!!! | GTTGAGTTTTTGTTGTTGGT+GGG | - | chr8.3:73451710-73451729 | None:intergenic | 35.0% |
!!! | GTTTTTAAGGTCACAGGTTA+AGG | + | chr8.3:73452530-73452549 | MS.gene011125:CDS | 35.0% |
!!! | TGTTGAGTTTTTGTTGTTGG+TGG | - | chr8.3:73451711-73451730 | None:intergenic | 35.0% |
AAGAGAACACACCAATCTTG+TGG | + | chr8.3:73451419-73451438 | MS.gene011125:CDS | 40.0% | |
AATTCTTCACCTGTTGAAGG+TGG | + | chr8.3:73452108-73452127 | MS.gene011125:CDS | 40.0% | |
AGAATTGTCAGTGCTACAGA+TGG | + | chr8.3:73451970-73451989 | MS.gene011125:CDS | 40.0% | |
ATGGATGGTCTAAATTGGGA+TGG | + | chr8.3:73451385-73451404 | MS.gene011125:CDS | 40.0% | |
GTAAGGTCTACTGTCTGAAA+AGG | - | chr8.3:73451662-73451681 | None:intergenic | 40.0% | |
TACTAGGGATGGGAAAAGAA+GGG | - | chr8.3:73452626-73452645 | None:intergenic | 40.0% | |
TGTTGAGTACTCCACAAGAT+TGG | - | chr8.3:73451433-73451452 | None:intergenic | 40.0% | |
TGTTGCTGCAAGACATAGAA+GGG | + | chr8.3:73452407-73452426 | MS.gene011125:CDS | 40.0% | |
TTACTAGGGATGGGAAAAGA+AGG | - | chr8.3:73452627-73452646 | None:intergenic | 40.0% | |
TTGCAAAAGATTGTACCTGG+TGG | + | chr8.3:73452456-73452475 | MS.gene011125:CDS | 40.0% | |
! | ATTCTGATTGAAGGTGTGTC+TGG | - | chr8.3:73451955-73451974 | None:intergenic | 40.0% |
! | GCACTGACAATTCTGATTGA+AGG | - | chr8.3:73451964-73451983 | None:intergenic | 40.0% |
AATCAAAAGCTGGATCCAGC+TGG | + | chr8.3:73451602-73451621 | MS.gene011125:CDS | 45.0% | |
ACTATCAGTTTCACCTGAGG+AGG | - | chr8.3:73451878-73451897 | None:intergenic | 45.0% | |
CAAGGTCCCTTATCACATCT+TGG | - | chr8.3:73452174-73452193 | None:intergenic | 45.0% | |
CACTGCTTCAATGCTTGATG+AGG | + | chr8.3:73452491-73452510 | MS.gene011125:CDS | 45.0% | |
CTGTTGCTGCAAGACATAGA+AGG | + | chr8.3:73452406-73452425 | MS.gene011125:CDS | 45.0% | |
TAAAGGTTCTTCTCTCCAGC+TGG | - | chr8.3:73451620-73451639 | None:intergenic | 45.0% | |
TGTACCTGGTGGAAGCAAAA+TGG | + | chr8.3:73452467-73452486 | MS.gene011125:CDS | 45.0% | |
TGTCTTGCAGCAACAGTTTG+TGG | - | chr8.3:73452402-73452421 | None:intergenic | 45.0% | |
! | AGTCTAAAGCCACCTTCAAC+AGG | - | chr8.3:73452120-73452139 | None:intergenic | 45.0% |
! | TGGATGGATGTATTGATCCG+AGG | - | chr8.3:73452058-73452077 | None:intergenic | 45.0% |
AGTAACACAGCAACCTCCTC+AGG | + | chr8.3:73451862-73451881 | MS.gene011125:CDS | 50.0% | |
GTCAGTGCTACAGATGGTAC+CGG | + | chr8.3:73451976-73451995 | MS.gene011125:CDS | 50.0% | |
! | GTGTCCATTTTGCTTCCACC+AGG | - | chr8.3:73452474-73452493 | None:intergenic | 50.0% |
! | TGGTGGGCCATGTTGAAATC+TGG | - | chr8.3:73451694-73451713 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 73451385 | 73452671 | 73451385 | ID=MS.gene011125 |
chr8.3 | mRNA | 73451385 | 73452671 | 73451385 | ID=MS.gene011125.t1;Parent=MS.gene011125 |
chr8.3 | exon | 73451385 | 73452671 | 73451385 | ID=MS.gene011125.t1.exon1;Parent=MS.gene011125.t1 |
chr8.3 | CDS | 73451385 | 73452671 | 73451385 | ID=cds.MS.gene011125.t1;Parent=MS.gene011125.t1 |
Gene Sequence |
Protein sequence |