Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011446.t1 | XP_013457660.1 | 93.4 | 211 | 8 | 1 | 1 | 211 | 1 | 205 | 9.50E-98 | 366.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011446.t1 | O82743 | 57.7 | 213 | 87 | 3 | 1 | 211 | 1 | 212 | 2.1e-53 | 210.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011446.t1 | A0A072UQQ3 | 93.4 | 211 | 8 | 1 | 1 | 211 | 1 | 205 | 6.8e-98 | 366.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene011446.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011446.t1 | MTR_4g102530 | 93.365 | 211 | 8 | 1 | 1 | 211 | 1 | 205 | 8.73e-138 | 384 |
MS.gene011446.t1 | MTR_8g033220 | 58.525 | 217 | 81 | 4 | 1 | 209 | 1 | 216 | 6.00e-76 | 228 |
MS.gene011446.t1 | MTR_8g033220 | 58.525 | 217 | 81 | 4 | 1 | 209 | 1 | 216 | 8.87e-76 | 228 |
MS.gene011446.t1 | MTR_7g075870 | 57.971 | 207 | 84 | 1 | 1 | 204 | 1 | 207 | 3.21e-72 | 218 |
MS.gene011446.t1 | MTR_7g075870 | 58.173 | 208 | 83 | 2 | 1 | 204 | 1 | 208 | 2.29e-71 | 216 |
MS.gene011446.t1 | MTR_8g033270 | 50.857 | 175 | 70 | 3 | 1 | 167 | 1 | 167 | 4.88e-48 | 158 |
MS.gene011446.t1 | MTR_3g005530 | 47.619 | 168 | 86 | 1 | 1 | 168 | 1 | 166 | 2.05e-45 | 150 |
MS.gene011446.t1 | MTR_7g075850 | 51.163 | 172 | 75 | 3 | 1 | 167 | 1 | 168 | 4.52e-45 | 150 |
MS.gene011446.t1 | MTR_7g016600 | 47.093 | 172 | 81 | 4 | 1 | 167 | 1 | 167 | 3.65e-44 | 148 |
MS.gene011446.t1 | MTR_6g015975 | 47.093 | 172 | 81 | 4 | 1 | 167 | 1 | 167 | 2.75e-43 | 145 |
MS.gene011446.t1 | MTR_3g452380 | 46.471 | 170 | 85 | 2 | 1 | 167 | 16 | 182 | 7.51e-43 | 144 |
MS.gene011446.t1 | MTR_3g084980 | 47.674 | 172 | 82 | 3 | 1 | 167 | 1 | 169 | 2.14e-42 | 143 |
MS.gene011446.t1 | MTR_2g009890 | 43.850 | 187 | 84 | 2 | 1 | 177 | 1 | 176 | 3.09e-42 | 144 |
MS.gene011446.t1 | MTR_2g017865 | 44.643 | 168 | 90 | 3 | 3 | 169 | 18 | 183 | 3.30e-42 | 143 |
MS.gene011446.t1 | MTR_8g097090 | 47.093 | 172 | 83 | 3 | 1 | 167 | 1 | 169 | 3.95e-42 | 142 |
MS.gene011446.t1 | MTR_4g109810 | 48.214 | 168 | 84 | 3 | 1 | 167 | 1 | 166 | 1.52e-41 | 141 |
MS.gene011446.t1 | MTR_8g066260 | 46.552 | 174 | 80 | 3 | 1 | 167 | 1 | 168 | 1.64e-40 | 138 |
MS.gene011446.t1 | MTR_8g087860 | 42.424 | 165 | 95 | 0 | 3 | 167 | 19 | 183 | 3.41e-40 | 137 |
MS.gene011446.t1 | MTR_4g109830 | 47.337 | 169 | 86 | 3 | 1 | 167 | 1 | 168 | 5.33e-40 | 137 |
MS.gene011446.t1 | MTR_7g016630 | 46.199 | 171 | 87 | 3 | 1 | 169 | 1 | 168 | 9.97e-40 | 137 |
MS.gene011446.t1 | MTR_1g101970 | 41.758 | 182 | 105 | 1 | 1 | 181 | 1 | 182 | 1.74e-37 | 129 |
MS.gene011446.t1 | MTR_1g053070 | 44.828 | 174 | 92 | 2 | 1 | 170 | 1 | 174 | 2.66e-37 | 130 |
MS.gene011446.t1 | MTR_5g046790 | 45.198 | 177 | 84 | 3 | 1 | 170 | 1 | 171 | 5.06e-37 | 128 |
MS.gene011446.t1 | MTR_4g093970 | 41.121 | 214 | 114 | 5 | 1 | 206 | 27 | 236 | 2.54e-36 | 127 |
MS.gene011446.t1 | MTR_1g038300 | 41.573 | 178 | 89 | 4 | 1 | 168 | 1 | 173 | 7.96e-36 | 126 |
MS.gene011446.t1 | MTR_6g464720 | 45.882 | 170 | 88 | 3 | 1 | 167 | 1 | 169 | 4.37e-35 | 124 |
MS.gene011446.t1 | MTR_5g031000 | 41.808 | 177 | 101 | 2 | 1 | 177 | 1 | 175 | 1.07e-34 | 123 |
MS.gene011446.t1 | MTR_5g031000 | 43.195 | 169 | 94 | 2 | 1 | 169 | 1 | 167 | 1.26e-34 | 122 |
MS.gene011446.t1 | MTR_5g032150 | 39.631 | 217 | 115 | 6 | 1 | 207 | 1 | 211 | 1.76e-34 | 122 |
MS.gene011446.t1 | MTR_5g032520 | 38.389 | 211 | 125 | 4 | 1 | 207 | 1 | 210 | 3.51e-34 | 121 |
MS.gene011446.t1 | MTR_4g036050 | 41.341 | 179 | 83 | 6 | 1 | 167 | 1 | 169 | 3.54e-32 | 115 |
MS.gene011446.t1 | MTR_0003s0590 | 44.000 | 175 | 90 | 2 | 1 | 170 | 1 | 172 | 7.93e-32 | 116 |
MS.gene011446.t1 | MTR_5g046870 | 71.831 | 71 | 19 | 1 | 1 | 70 | 1 | 71 | 1.74e-30 | 108 |
MS.gene011446.t1 | MTR_4g036050 | 41.071 | 168 | 77 | 6 | 1 | 156 | 1 | 158 | 1.76e-30 | 111 |
MS.gene011446.t1 | MTR_5g066180 | 38.372 | 172 | 94 | 2 | 1 | 167 | 1 | 165 | 3.23e-30 | 111 |
MS.gene011446.t1 | MTR_8g033250 | 43.949 | 157 | 79 | 4 | 61 | 209 | 3 | 158 | 3.40e-30 | 109 |
MS.gene011446.t1 | MTR_3g113030 | 41.875 | 160 | 82 | 4 | 1 | 156 | 1 | 153 | 3.55e-30 | 111 |
MS.gene011446.t1 | MTR_4g036050 | 42.767 | 159 | 69 | 6 | 1 | 147 | 1 | 149 | 4.33e-29 | 107 |
MS.gene011446.t1 | MTR_3g088615 | 40.000 | 170 | 89 | 4 | 1 | 167 | 1 | 160 | 5.20e-29 | 107 |
MS.gene011446.t1 | MTR_4g036050 | 42.857 | 154 | 66 | 6 | 1 | 142 | 1 | 144 | 3.86e-28 | 104 |
MS.gene011446.t1 | MTR_2g461710 | 77.966 | 59 | 13 | 0 | 1 | 59 | 1 | 59 | 2.59e-26 | 96.7 |
MS.gene011446.t1 | MTR_5g021270 | 36.364 | 176 | 95 | 3 | 1 | 167 | 1 | 168 | 3.97e-26 | 100 |
MS.gene011446.t1 | MTR_5g021270 | 36.364 | 176 | 95 | 3 | 1 | 167 | 1 | 168 | 4.01e-26 | 100 |
MS.gene011446.t1 | MTR_1g029670 | 37.278 | 169 | 95 | 4 | 1 | 167 | 1 | 160 | 2.68e-25 | 97.4 |
MS.gene011446.t1 | MTR_5g066960 | 66.667 | 60 | 20 | 0 | 1 | 60 | 1 | 60 | 1.54e-24 | 92.0 |
MS.gene011446.t1 | MTR_3g102570 | 54.945 | 91 | 36 | 2 | 1 | 90 | 1 | 87 | 6.66e-22 | 91.7 |
MS.gene011446.t1 | MTR_4g093030 | 64.516 | 62 | 22 | 0 | 1 | 62 | 1 | 62 | 2.59e-21 | 86.7 |
MS.gene011446.t1 | MTR_1g041615 | 83.333 | 48 | 8 | 0 | 13 | 60 | 17 | 64 | 5.26e-21 | 85.1 |
MS.gene011446.t1 | MTR_4g084740 | 57.143 | 70 | 29 | 1 | 1 | 69 | 1 | 70 | 2.40e-19 | 84.7 |
MS.gene011446.t1 | MTR_1g108510 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 2.60e-19 | 82.8 |
MS.gene011446.t1 | MTR_2g093190 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 2.82e-19 | 82.8 |
MS.gene011446.t1 | MTR_3g030770 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 3.13e-19 | 82.8 |
MS.gene011446.t1 | MTR_1g108580 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 5.43e-19 | 82.0 |
MS.gene011446.t1 | MTR_2g030740 | 52.055 | 73 | 35 | 0 | 3 | 75 | 10 | 82 | 5.80e-19 | 82.4 |
MS.gene011446.t1 | MTR_3g052870 | 50.685 | 73 | 36 | 0 | 3 | 75 | 10 | 82 | 8.27e-19 | 81.3 |
MS.gene011446.t1 | MTR_8g043650 | 44.211 | 95 | 53 | 0 | 3 | 97 | 10 | 104 | 8.77e-19 | 81.6 |
MS.gene011446.t1 | MTR_1g105920 | 35.862 | 145 | 73 | 5 | 3 | 131 | 10 | 150 | 1.27e-18 | 81.3 |
MS.gene011446.t1 | MTR_3g052920 | 52.055 | 73 | 35 | 0 | 3 | 75 | 10 | 82 | 1.47e-18 | 81.3 |
MS.gene011446.t1 | MTR_1g075600 | 50.685 | 73 | 36 | 0 | 3 | 75 | 10 | 82 | 1.63e-18 | 80.9 |
MS.gene011446.t1 | MTR_1g105910 | 50.685 | 73 | 36 | 0 | 3 | 75 | 10 | 82 | 2.71e-18 | 80.5 |
MS.gene011446.t1 | MTR_1g077360 | 50.685 | 73 | 36 | 0 | 3 | 75 | 10 | 82 | 2.97e-18 | 80.5 |
MS.gene011446.t1 | MTR_1g012570 | 50.000 | 72 | 36 | 0 | 3 | 74 | 10 | 81 | 1.42e-17 | 78.6 |
MS.gene011446.t1 | MTR_8g086290 | 34.375 | 160 | 96 | 2 | 3 | 162 | 13 | 163 | 1.47e-17 | 77.0 |
MS.gene011446.t1 | MTR_2g085250 | 52.239 | 67 | 32 | 0 | 3 | 69 | 10 | 76 | 1.59e-17 | 78.6 |
MS.gene011446.t1 | MTR_2g085280 | 52.239 | 67 | 32 | 0 | 3 | 69 | 10 | 76 | 1.79e-17 | 78.2 |
MS.gene011446.t1 | MTR_5g045560 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 3.31e-17 | 77.4 |
MS.gene011446.t1 | MTR_3g030780 | 38.462 | 117 | 70 | 1 | 2 | 116 | 7 | 123 | 4.33e-17 | 74.7 |
MS.gene011446.t1 | MTR_1g106070 | 47.887 | 71 | 37 | 0 | 3 | 73 | 10 | 80 | 9.70e-17 | 75.1 |
MS.gene011446.t1 | MTR_5g055100 | 47.945 | 73 | 38 | 0 | 3 | 75 | 10 | 82 | 1.09e-16 | 76.3 |
MS.gene011446.t1 | MTR_7g028448 | 39.831 | 118 | 66 | 2 | 15 | 127 | 25 | 142 | 1.20e-16 | 74.7 |
MS.gene011446.t1 | MTR_4g036915 | 39.831 | 118 | 66 | 2 | 15 | 127 | 25 | 142 | 1.20e-16 | 74.7 |
MS.gene011446.t1 | MTR_3g080940 | 36.290 | 124 | 59 | 4 | 3 | 116 | 10 | 123 | 1.36e-16 | 75.1 |
MS.gene011446.t1 | MTR_5g053390 | 49.296 | 71 | 36 | 0 | 3 | 73 | 10 | 80 | 2.12e-16 | 75.5 |
MS.gene011446.t1 | MTR_0121s0100 | 49.254 | 67 | 34 | 0 | 3 | 69 | 10 | 76 | 4.30e-16 | 72.0 |
MS.gene011446.t1 | MTR_8g051580 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 6.80e-16 | 72.8 |
MS.gene011446.t1 | MTR_8g079502 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 7.54e-16 | 72.8 |
MS.gene011446.t1 | MTR_1g054265 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 1.06e-15 | 72.0 |
MS.gene011446.t1 | MTR_2g105290 | 36.364 | 143 | 72 | 4 | 1 | 127 | 11 | 150 | 1.11e-15 | 72.0 |
MS.gene011446.t1 | MTR_1g063160 | 44.928 | 69 | 38 | 0 | 1 | 69 | 1 | 69 | 1.79e-15 | 71.6 |
MS.gene011446.t1 | MTR_1g047550 | 46.377 | 69 | 37 | 0 | 1 | 69 | 1 | 69 | 1.92e-15 | 71.6 |
MS.gene011446.t1 | MTR_4g094638 | 44.928 | 69 | 38 | 0 | 1 | 69 | 1 | 69 | 2.66e-15 | 71.2 |
MS.gene011446.t1 | MTR_4g131030 | 42.857 | 77 | 44 | 0 | 1 | 77 | 1 | 77 | 5.64e-15 | 71.2 |
MS.gene011446.t1 | MTR_1g105905 | 49.231 | 65 | 33 | 0 | 11 | 75 | 1 | 65 | 6.49e-15 | 70.9 |
MS.gene011446.t1 | MTR_0121s0080 | 45.070 | 71 | 39 | 0 | 5 | 75 | 12 | 82 | 1.78e-14 | 70.1 |
MS.gene011446.t1 | MTR_4g094632 | 42.029 | 69 | 40 | 0 | 1 | 69 | 1 | 69 | 8.06e-14 | 66.6 |
MS.gene011446.t1 | MTR_4g108720 | 46.479 | 71 | 36 | 1 | 1 | 69 | 1 | 71 | 3.04e-13 | 67.8 |
MS.gene011446.t1 | MTR_3g067875 | 57.143 | 56 | 23 | 1 | 11 | 66 | 1 | 55 | 4.44e-13 | 62.4 |
MS.gene011446.t1 | MTR_5g041650 | 32.222 | 180 | 96 | 6 | 1 | 154 | 38 | 217 | 6.52e-13 | 67.0 |
MS.gene011446.t1 | MTR_8g046350 | 40.580 | 69 | 41 | 0 | 1 | 69 | 1 | 69 | 7.87e-13 | 64.3 |
MS.gene011446.t1 | MTR_7g062350 | 41.892 | 74 | 42 | 1 | 2 | 74 | 20 | 93 | 3.96e-11 | 60.8 |
MS.gene011446.t1 | MTR_4g127140 | 37.398 | 123 | 62 | 4 | 15 | 125 | 25 | 144 | 4.94e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011446.t1 | AT4G22950 | 58.294 | 211 | 85 | 3 | 1 | 209 | 1 | 210 | 1.74e-72 | 219 |
MS.gene011446.t1 | AT4G22950 | 58.294 | 211 | 85 | 3 | 1 | 209 | 1 | 210 | 1.74e-72 | 219 |
MS.gene011446.t1 | AT2G45660 | 57.619 | 210 | 84 | 4 | 1 | 206 | 1 | 209 | 2.56e-68 | 208 |
MS.gene011446.t1 | AT4G22950 | 64.671 | 167 | 58 | 1 | 1 | 167 | 1 | 166 | 4.17e-68 | 206 |
MS.gene011446.t1 | AT2G45660 | 64.968 | 157 | 53 | 2 | 1 | 156 | 1 | 156 | 1.20e-63 | 194 |
MS.gene011446.t1 | AT4G11880 | 55.869 | 213 | 89 | 4 | 1 | 209 | 1 | 212 | 5.20e-63 | 195 |
MS.gene011446.t1 | AT4G11880 | 55.869 | 213 | 89 | 4 | 1 | 209 | 1 | 212 | 5.20e-63 | 195 |
MS.gene011446.t1 | AT5G62165 | 51.442 | 208 | 101 | 0 | 1 | 208 | 1 | 208 | 3.95e-61 | 190 |
MS.gene011446.t1 | AT5G62165 | 51.442 | 208 | 101 | 0 | 1 | 208 | 1 | 208 | 3.95e-61 | 190 |
MS.gene011446.t1 | AT5G62165 | 51.442 | 208 | 101 | 0 | 1 | 208 | 1 | 208 | 3.95e-61 | 190 |
MS.gene011446.t1 | AT4G11880 | 63.694 | 157 | 55 | 2 | 1 | 156 | 1 | 156 | 7.78e-61 | 188 |
MS.gene011446.t1 | AT4G11880 | 63.694 | 157 | 55 | 2 | 1 | 156 | 1 | 156 | 7.78e-61 | 188 |
MS.gene011446.t1 | AT5G62165 | 56.410 | 156 | 68 | 0 | 1 | 156 | 1 | 156 | 1.08e-53 | 169 |
MS.gene011446.t1 | AT5G62165 | 56.410 | 156 | 68 | 0 | 1 | 156 | 1 | 156 | 1.08e-53 | 169 |
MS.gene011446.t1 | AT5G62165 | 56.410 | 156 | 68 | 0 | 1 | 156 | 1 | 156 | 1.08e-53 | 169 |
MS.gene011446.t1 | AT5G51870 | 45.972 | 211 | 109 | 2 | 1 | 210 | 1 | 207 | 1.72e-53 | 171 |
MS.gene011446.t1 | AT5G51860 | 45.714 | 210 | 113 | 1 | 1 | 209 | 1 | 210 | 4.74e-53 | 169 |
MS.gene011446.t1 | AT5G62165 | 47.596 | 208 | 95 | 1 | 1 | 208 | 1 | 194 | 7.74e-53 | 168 |
MS.gene011446.t1 | AT5G62165 | 47.596 | 208 | 95 | 1 | 1 | 208 | 1 | 194 | 7.74e-53 | 168 |
MS.gene011446.t1 | AT5G51860 | 45.238 | 210 | 105 | 2 | 1 | 209 | 1 | 201 | 1.06e-51 | 166 |
MS.gene011446.t1 | AT5G51870 | 43.172 | 227 | 104 | 3 | 1 | 210 | 1 | 219 | 3.57e-51 | 165 |
MS.gene011446.t1 | AT5G51870 | 43.172 | 227 | 104 | 3 | 1 | 210 | 11 | 229 | 3.74e-51 | 165 |
MS.gene011446.t1 | AT5G62165 | 56.164 | 146 | 64 | 0 | 1 | 146 | 1 | 146 | 5.97e-50 | 159 |
MS.gene011446.t1 | AT5G62165 | 56.164 | 146 | 64 | 0 | 1 | 146 | 1 | 146 | 5.97e-50 | 159 |
MS.gene011446.t1 | AT5G62165 | 56.164 | 146 | 64 | 0 | 1 | 146 | 1 | 146 | 5.97e-50 | 159 |
MS.gene011446.t1 | AT5G62165 | 56.164 | 146 | 64 | 0 | 1 | 146 | 1 | 146 | 5.97e-50 | 159 |
MS.gene011446.t1 | AT5G62165 | 56.164 | 146 | 64 | 0 | 1 | 146 | 1 | 146 | 5.97e-50 | 159 |
MS.gene011446.t1 | AT2G45650 | 52.695 | 167 | 78 | 1 | 1 | 167 | 1 | 166 | 1.53e-48 | 159 |
MS.gene011446.t1 | AT2G03710 | 46.927 | 179 | 86 | 3 | 1 | 174 | 1 | 175 | 7.77e-46 | 150 |
MS.gene011446.t1 | AT4G09960 | 48.485 | 165 | 83 | 2 | 1 | 164 | 1 | 164 | 2.55e-45 | 150 |
MS.gene011446.t1 | AT4G09960 | 48.485 | 165 | 83 | 2 | 1 | 164 | 2 | 165 | 2.60e-45 | 150 |
MS.gene011446.t1 | AT4G09960 | 48.485 | 165 | 83 | 2 | 1 | 164 | 11 | 174 | 2.90e-45 | 150 |
MS.gene011446.t1 | AT4G09960 | 48.485 | 165 | 83 | 2 | 1 | 164 | 27 | 190 | 8.30e-45 | 150 |
MS.gene011446.t1 | AT4G09960 | 48.780 | 164 | 80 | 3 | 1 | 163 | 96 | 256 | 3.49e-44 | 150 |
MS.gene011446.t1 | AT4G09960 | 51.049 | 143 | 68 | 2 | 1 | 142 | 1 | 142 | 5.66e-44 | 146 |
MS.gene011446.t1 | AT1G24260 | 48.837 | 172 | 81 | 3 | 1 | 167 | 1 | 170 | 8.35e-44 | 147 |
MS.gene011446.t1 | AT4G18960 | 45.455 | 165 | 90 | 0 | 3 | 167 | 19 | 183 | 9.10e-44 | 147 |
MS.gene011446.t1 | AT2G03710 | 47.674 | 172 | 81 | 3 | 1 | 167 | 1 | 168 | 1.50e-43 | 147 |
MS.gene011446.t1 | AT2G03710 | 47.674 | 172 | 81 | 3 | 1 | 167 | 1 | 168 | 1.63e-43 | 146 |
MS.gene011446.t1 | AT1G24260 | 47.458 | 177 | 77 | 3 | 1 | 167 | 1 | 171 | 2.26e-43 | 146 |
MS.gene011446.t1 | AT3G58780 | 42.541 | 181 | 102 | 1 | 3 | 183 | 18 | 196 | 3.54e-43 | 145 |
MS.gene011446.t1 | AT3G58780 | 42.541 | 181 | 102 | 1 | 3 | 183 | 24 | 202 | 4.39e-43 | 145 |
MS.gene011446.t1 | AT1G26310 | 45.960 | 198 | 102 | 2 | 1 | 194 | 1 | 197 | 1.35e-42 | 144 |
MS.gene011446.t1 | AT5G15800 | 47.429 | 175 | 79 | 3 | 1 | 168 | 1 | 169 | 2.02e-42 | 144 |
MS.gene011446.t1 | AT5G15800 | 47.701 | 174 | 78 | 3 | 1 | 167 | 1 | 168 | 5.35e-42 | 143 |
MS.gene011446.t1 | AT1G69120 | 48.000 | 175 | 84 | 3 | 1 | 171 | 1 | 172 | 9.39e-42 | 141 |
MS.gene011446.t1 | AT2G42830 | 43.636 | 165 | 93 | 0 | 3 | 167 | 18 | 182 | 1.23e-41 | 141 |
MS.gene011446.t1 | AT3G57230 | 44.385 | 187 | 97 | 2 | 1 | 187 | 1 | 180 | 1.40e-41 | 141 |
MS.gene011446.t1 | AT3G57230 | 44.385 | 187 | 97 | 2 | 1 | 187 | 1 | 180 | 1.40e-41 | 141 |
MS.gene011446.t1 | AT3G61120 | 50.299 | 167 | 81 | 2 | 1 | 167 | 1 | 165 | 2.78e-41 | 140 |
MS.gene011446.t1 | AT3G02310 | 47.126 | 174 | 79 | 3 | 1 | 167 | 1 | 168 | 3.03e-41 | 139 |
MS.gene011446.t1 | AT1G69120 | 48.276 | 174 | 83 | 3 | 1 | 170 | 1 | 171 | 3.25e-41 | 140 |
MS.gene011446.t1 | AT3G02310 | 47.126 | 174 | 79 | 3 | 1 | 167 | 1 | 168 | 5.41e-41 | 140 |
MS.gene011446.t1 | AT5G60910 | 45.977 | 174 | 87 | 3 | 1 | 170 | 1 | 171 | 5.79e-41 | 139 |
MS.gene011446.t1 | AT2G42830 | 37.563 | 197 | 123 | 0 | 3 | 199 | 18 | 214 | 6.57e-41 | 139 |
MS.gene011446.t1 | AT5G51870 | 48.980 | 147 | 74 | 1 | 1 | 146 | 1 | 147 | 1.18e-40 | 136 |
MS.gene011446.t1 | AT5G51870 | 48.980 | 147 | 74 | 1 | 1 | 146 | 24 | 170 | 2.87e-40 | 136 |
MS.gene011446.t1 | AT3G58780 | 46.429 | 140 | 75 | 0 | 3 | 142 | 18 | 157 | 1.60e-39 | 137 |
MS.gene011446.t1 | AT1G24260 | 46.386 | 166 | 73 | 3 | 1 | 156 | 1 | 160 | 4.52e-39 | 134 |
MS.gene011446.t1 | AT3G58780 | 40.884 | 181 | 98 | 2 | 3 | 183 | 18 | 189 | 4.35e-38 | 132 |
MS.gene011446.t1 | AT3G57230 | 47.887 | 142 | 73 | 1 | 1 | 142 | 1 | 141 | 1.54e-37 | 127 |
MS.gene011446.t1 | AT3G58780 | 37.379 | 206 | 102 | 2 | 3 | 183 | 18 | 221 | 1.68e-37 | 131 |
MS.gene011446.t1 | AT4G37940 | 41.243 | 177 | 91 | 2 | 1 | 171 | 1 | 170 | 4.71e-37 | 129 |
MS.gene011446.t1 | AT3G57390 | 43.407 | 182 | 88 | 2 | 1 | 171 | 1 | 178 | 2.30e-36 | 127 |
MS.gene011446.t1 | AT3G57390 | 43.646 | 181 | 87 | 2 | 1 | 170 | 1 | 177 | 7.72e-36 | 127 |
MS.gene011446.t1 | AT2G22540 | 43.017 | 179 | 84 | 3 | 1 | 170 | 1 | 170 | 9.99e-36 | 126 |
MS.gene011446.t1 | AT2G22540 | 43.017 | 179 | 84 | 3 | 1 | 170 | 1 | 170 | 9.99e-36 | 126 |
MS.gene011446.t1 | AT5G23260 | 41.758 | 182 | 79 | 4 | 1 | 169 | 1 | 168 | 1.28e-35 | 126 |
MS.gene011446.t1 | AT5G23260 | 41.758 | 182 | 79 | 4 | 1 | 169 | 17 | 184 | 2.24e-35 | 126 |
MS.gene011446.t1 | AT4G37940 | 36.232 | 207 | 113 | 3 | 1 | 201 | 1 | 194 | 1.59e-34 | 122 |
MS.gene011446.t1 | AT5G13790 | 46.286 | 175 | 82 | 4 | 1 | 171 | 1 | 167 | 2.12e-34 | 123 |
MS.gene011446.t1 | AT4G37940 | 44.295 | 149 | 70 | 2 | 1 | 143 | 1 | 142 | 7.29e-34 | 119 |
MS.gene011446.t1 | AT2G22630 | 42.197 | 173 | 95 | 3 | 1 | 171 | 1 | 170 | 9.97e-34 | 120 |
MS.gene011446.t1 | AT2G22630 | 42.197 | 173 | 95 | 3 | 1 | 171 | 1 | 170 | 9.97e-34 | 120 |
MS.gene011446.t1 | AT3G30260 | 46.104 | 154 | 76 | 3 | 1 | 150 | 1 | 151 | 8.21e-33 | 119 |
MS.gene011446.t1 | AT4G24540 | 42.941 | 170 | 91 | 3 | 1 | 167 | 1 | 167 | 9.31e-33 | 118 |
MS.gene011446.t1 | AT5G10140 | 45.860 | 157 | 76 | 3 | 1 | 156 | 1 | 149 | 1.58e-32 | 116 |
MS.gene011446.t1 | AT5G23260 | 41.209 | 182 | 75 | 5 | 1 | 169 | 17 | 179 | 1.79e-32 | 118 |
MS.gene011446.t1 | AT5G13790 | 44.828 | 174 | 81 | 4 | 1 | 170 | 1 | 163 | 4.27e-32 | 117 |
MS.gene011446.t1 | AT5G62165 | 60.440 | 91 | 36 | 0 | 1 | 91 | 1 | 91 | 5.32e-32 | 112 |
MS.gene011446.t1 | AT2G14210 | 40.556 | 180 | 81 | 5 | 1 | 167 | 1 | 167 | 3.08e-31 | 114 |
MS.gene011446.t1 | AT3G54340 | 42.593 | 162 | 82 | 3 | 1 | 158 | 1 | 155 | 3.26e-31 | 114 |
MS.gene011446.t1 | AT5G65060 | 40.113 | 177 | 89 | 4 | 1 | 172 | 1 | 165 | 3.67e-31 | 113 |
MS.gene011446.t1 | AT2G14210 | 41.860 | 172 | 90 | 4 | 1 | 167 | 1 | 167 | 3.78e-31 | 114 |
MS.gene011446.t1 | AT5G10140 | 45.714 | 175 | 86 | 3 | 1 | 174 | 1 | 167 | 4.40e-31 | 112 |
MS.gene011446.t1 | AT5G10140 | 45.977 | 174 | 85 | 3 | 1 | 173 | 1 | 166 | 1.14e-30 | 111 |
MS.gene011446.t1 | AT2G22540 | 40.223 | 179 | 84 | 4 | 1 | 170 | 1 | 165 | 2.22e-30 | 112 |
MS.gene011446.t1 | AT5G10140 | 43.617 | 188 | 95 | 4 | 1 | 187 | 1 | 178 | 2.81e-30 | 110 |
MS.gene011446.t1 | AT5G65060 | 39.773 | 176 | 89 | 4 | 1 | 171 | 1 | 164 | 3.59e-30 | 110 |
MS.gene011446.t1 | AT5G23260 | 42.857 | 161 | 65 | 4 | 1 | 148 | 1 | 147 | 4.00e-30 | 111 |
MS.gene011446.t1 | AT5G65050 | 39.306 | 173 | 96 | 3 | 1 | 172 | 1 | 165 | 9.52e-30 | 109 |
MS.gene011446.t1 | AT5G65070 | 40.223 | 179 | 82 | 4 | 1 | 170 | 1 | 163 | 5.19e-29 | 107 |
MS.gene011446.t1 | AT5G65050 | 38.953 | 172 | 96 | 3 | 1 | 171 | 1 | 164 | 5.92e-29 | 107 |
MS.gene011446.t1 | AT1G77080 | 45.198 | 177 | 80 | 4 | 1 | 172 | 1 | 165 | 1.12e-28 | 106 |
MS.gene011446.t1 | AT5G20240 | 38.728 | 173 | 93 | 5 | 1 | 170 | 1 | 163 | 1.71e-28 | 106 |
MS.gene011446.t1 | AT5G65060 | 38.857 | 175 | 83 | 4 | 1 | 172 | 1 | 154 | 3.46e-28 | 105 |
MS.gene011446.t1 | AT1G77080 | 44.382 | 178 | 82 | 4 | 1 | 173 | 1 | 166 | 5.00e-28 | 104 |
MS.gene011446.t1 | AT5G65070 | 40.102 | 197 | 88 | 6 | 1 | 170 | 1 | 194 | 1.22e-27 | 105 |
MS.gene011446.t1 | AT1G77080 | 44.633 | 177 | 81 | 4 | 1 | 172 | 1 | 165 | 1.58e-27 | 103 |
MS.gene011446.t1 | AT5G20240 | 41.549 | 142 | 74 | 3 | 1 | 139 | 1 | 136 | 4.24e-27 | 101 |
MS.gene011446.t1 | AT5G65050 | 38.150 | 173 | 87 | 4 | 1 | 172 | 1 | 154 | 1.05e-26 | 101 |
MS.gene011446.t1 | AT1G77080 | 45.087 | 173 | 82 | 3 | 1 | 172 | 1 | 161 | 4.15e-26 | 100 |
MS.gene011446.t1 | AT1G77080 | 43.147 | 197 | 82 | 8 | 1 | 172 | 1 | 192 | 8.12e-26 | 100 |
MS.gene011446.t1 | AT5G65050 | 35.754 | 179 | 102 | 4 | 1 | 174 | 1 | 171 | 6.99e-25 | 96.7 |
MS.gene011446.t1 | AT5G65080 | 38.750 | 160 | 83 | 3 | 1 | 156 | 8 | 156 | 8.69e-25 | 96.7 |
MS.gene011446.t1 | AT5G65070 | 37.563 | 197 | 94 | 5 | 1 | 170 | 1 | 195 | 2.11e-24 | 96.7 |
MS.gene011446.t1 | AT5G65070 | 42.177 | 147 | 76 | 3 | 1 | 146 | 1 | 139 | 3.01e-24 | 94.0 |
MS.gene011446.t1 | AT5G65080 | 40.645 | 155 | 84 | 2 | 1 | 155 | 8 | 154 | 3.06e-24 | 95.5 |
MS.gene011446.t1 | AT1G71692 | 40.000 | 175 | 97 | 4 | 1 | 167 | 1 | 175 | 3.19e-24 | 95.5 |
MS.gene011446.t1 | AT5G65070 | 40.000 | 185 | 77 | 7 | 1 | 156 | 1 | 180 | 4.03e-23 | 92.8 |
MS.gene011446.t1 | AT1G31140 | 39.310 | 145 | 85 | 2 | 1 | 143 | 1 | 144 | 3.02e-21 | 87.8 |
MS.gene011446.t1 | AT1G31140 | 41.722 | 151 | 75 | 5 | 1 | 143 | 1 | 146 | 3.92e-21 | 87.4 |
MS.gene011446.t1 | AT1G77080 | 43.949 | 157 | 75 | 3 | 1 | 156 | 1 | 145 | 7.59e-21 | 85.1 |
MS.gene011446.t1 | AT5G62165 | 38.217 | 157 | 88 | 2 | 55 | 208 | 5 | 155 | 4.59e-20 | 83.2 |
MS.gene011446.t1 | AT5G62165 | 38.217 | 157 | 88 | 2 | 55 | 208 | 5 | 155 | 4.59e-20 | 83.2 |
MS.gene011446.t1 | AT1G77980 | 57.143 | 70 | 29 | 1 | 1 | 69 | 1 | 70 | 1.96e-19 | 85.1 |
MS.gene011446.t1 | AT1G22130 | 57.143 | 70 | 29 | 1 | 1 | 69 | 1 | 70 | 3.80e-19 | 84.3 |
MS.gene011446.t1 | AT4G36590 | 46.809 | 94 | 48 | 1 | 3 | 96 | 8 | 99 | 3.12e-18 | 80.5 |
MS.gene011446.t1 | AT1G01530 | 50.704 | 71 | 35 | 0 | 3 | 73 | 8 | 78 | 2.12e-17 | 78.2 |
MS.gene011446.t1 | AT2G34440 | 31.707 | 164 | 87 | 5 | 1 | 144 | 1 | 159 | 1.13e-16 | 74.7 |
MS.gene011446.t1 | AT1G77950 | 51.429 | 70 | 33 | 1 | 1 | 69 | 1 | 70 | 1.15e-16 | 76.3 |
MS.gene011446.t1 | AT1G77950 | 51.429 | 70 | 33 | 1 | 1 | 69 | 1 | 70 | 1.15e-16 | 76.3 |
MS.gene011446.t1 | AT1G77950 | 51.429 | 70 | 33 | 1 | 1 | 69 | 1 | 70 | 1.15e-16 | 76.3 |
MS.gene011446.t1 | AT1G77950 | 51.429 | 70 | 33 | 1 | 1 | 69 | 1 | 70 | 1.15e-16 | 76.3 |
MS.gene011446.t1 | AT4G37435 | 51.515 | 66 | 32 | 0 | 1 | 66 | 1 | 66 | 1.51e-16 | 74.7 |
MS.gene011446.t1 | AT5G60440 | 29.208 | 202 | 126 | 6 | 3 | 190 | 8 | 206 | 3.48e-16 | 75.9 |
MS.gene011446.t1 | AT2G24840 | 38.889 | 108 | 66 | 0 | 3 | 110 | 64 | 171 | 4.96e-16 | 74.7 |
MS.gene011446.t1 | AT3G04100 | 35.849 | 106 | 59 | 2 | 5 | 105 | 17 | 118 | 1.40e-15 | 72.8 |
MS.gene011446.t1 | AT1G18750 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 1.75e-15 | 74.3 |
MS.gene011446.t1 | AT1G18750 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 1.82e-15 | 74.3 |
MS.gene011446.t1 | AT1G18750 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 2.15e-15 | 74.3 |
MS.gene011446.t1 | AT3G66656 | 45.714 | 70 | 38 | 0 | 1 | 70 | 1 | 70 | 4.39e-15 | 70.5 |
MS.gene011446.t1 | AT1G65360 | 45.070 | 71 | 39 | 0 | 3 | 73 | 8 | 78 | 5.54e-15 | 71.2 |
MS.gene011446.t1 | AT1G28460 | 49.231 | 65 | 33 | 0 | 5 | 69 | 11 | 75 | 2.95e-14 | 68.6 |
MS.gene011446.t1 | AT1G29962 | 47.692 | 65 | 34 | 0 | 5 | 69 | 11 | 75 | 4.16e-14 | 68.2 |
MS.gene011446.t1 | AT1G72350 | 43.750 | 80 | 43 | 1 | 3 | 82 | 44 | 121 | 1.87e-13 | 67.0 |
MS.gene011446.t1 | AT1G69540 | 30.270 | 185 | 91 | 5 | 1 | 153 | 1 | 179 | 3.16e-13 | 67.8 |
MS.gene011446.t1 | AT1G69540 | 30.270 | 185 | 91 | 5 | 1 | 153 | 1 | 179 | 3.31e-13 | 67.8 |
MS.gene011446.t1 | AT1G28450 | 46.154 | 65 | 35 | 0 | 5 | 69 | 11 | 75 | 1.34e-12 | 63.9 |
MS.gene011446.t1 | AT1G47760 | 44.286 | 70 | 39 | 0 | 1 | 70 | 1 | 70 | 1.80e-12 | 63.9 |
MS.gene011446.t1 | AT2G03060 | 30.337 | 178 | 92 | 6 | 1 | 149 | 1 | 175 | 4.35e-12 | 64.7 |
MS.gene011446.t1 | AT2G03060 | 30.337 | 178 | 92 | 6 | 1 | 149 | 1 | 175 | 4.35e-12 | 64.7 |
MS.gene011446.t1 | AT2G03060 | 30.337 | 178 | 92 | 6 | 1 | 149 | 1 | 175 | 4.35e-12 | 64.7 |
MS.gene011446.t1 | AT2G03060 | 30.337 | 178 | 92 | 6 | 1 | 149 | 1 | 175 | 5.17e-12 | 64.3 |
MS.gene011446.t1 | AT5G62165 | 33.121 | 157 | 82 | 3 | 55 | 208 | 5 | 141 | 6.42e-12 | 61.2 |
Find 35 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAATAAACAACAAGATA+TGG | 0.284050 | 8.2:+21163662 | MS.gene011446:CDS |
GAAGTTGTTGGGAGATGAAT+TGG | 0.314977 | 8.2:+21163073 | MS.gene011446:CDS |
AAGAAATGGACTGCTTAAAA+AGG | 0.324915 | 8.2:+21153985 | MS.gene011446:CDS |
AACGTAGCTTAAGCAAAATA+AGG | 0.327292 | 8.2:+21163141 | MS.gene011446:CDS |
CATGTATTGTAGGAAGTTGT+TGG | 0.371428 | 8.2:+21163061 | MS.gene011446:intron |
TCATTGTTGTAGTGTGGAAT+TGG | 0.395925 | 8.2:+21163627 | MS.gene011446:intron |
ACTTTCTCAAAGAGAAGAAA+TGG | 0.422858 | 8.2:+21153971 | MS.gene011446:CDS |
GTGGAGACAGAATTGTTCAT+AGG | 0.429449 | 8.2:+21163717 | MS.gene011446:CDS |
AAATTAAACATACCTTGAAC+TGG | 0.446342 | 8.2:-21154086 | None:intergenic |
ATGTATTGTAGGAAGTTGTT+GGG | 0.449480 | 8.2:+21163062 | MS.gene011446:intron |
TCTATGAGTTCTCCAGTTCA+AGG | 0.460917 | 8.2:+21154074 | MS.gene011446:CDS |
GAAACAGTGGAACGCTATCA+AGG | 0.469619 | 8.2:+21158236 | MS.gene011446:CDS |
ACGTAGCTTAAGCAAAATAA+GGG | 0.475882 | 8.2:+21163142 | MS.gene011446:CDS |
TATAGACACAACAAAGAAGT+TGG | 0.480797 | 8.2:+21162911 | MS.gene011446:CDS |
CTCATCGTCTTCTCTACCAC+TGG | 0.481417 | 8.2:+21154046 | MS.gene011446:CDS |
TCAAGGGAAAGTTAAGGAAC+TGG | 0.481701 | 8.2:+21158253 | MS.gene011446:CDS |
AAGCAAAATAAGGGCAAGAA+AGG | 0.493681 | 8.2:+21163151 | MS.gene011446:CDS |
AAGTTGTTGGGAGATGAATT+GGG | 0.494375 | 8.2:+21163074 | MS.gene011446:CDS |
AATTGAAAAGCTAAAAGAAA+AGG | 0.505653 | 8.2:+21163281 | MS.gene011446:CDS |
AAGTGTGCATGACGAGGAGG+TGG | 0.514450 | 8.2:+21163698 | MS.gene011446:CDS |
AAATAAACGCTTATGCAAGC+AGG | 0.536574 | 8.2:+21163443 | MS.gene011446:CDS |
TGTTCAGAATCATTCGCTGA+AGG | 0.556434 | 8.2:+21163254 | MS.gene011446:intron |
AACACCTAGAGCTTTCCAAA+AGG | 0.559845 | 8.2:+21162934 | MS.gene011446:CDS |
TGGAGACAGAATTGTTCATA+GGG | 0.567939 | 8.2:+21163718 | MS.gene011446:CDS |
ACGCTATCAAGGGAAAGTTA+AGG | 0.569325 | 8.2:+21158247 | MS.gene011446:CDS |
GAACTGGCTCTCAGCACCAA+AGG | 0.605749 | 8.2:+21158269 | MS.gene011446:CDS |
ACAAAGCACTGAAAGTTCAA+AGG | 0.613392 | 8.2:-21154008 | None:intergenic |
AAACAGTGGAACGCTATCAA+GGG | 0.614255 | 8.2:+21158237 | MS.gene011446:CDS |
AACAGAAAGTGTGCATGACG+AGG | 0.635381 | 8.2:+21163692 | MS.gene011446:CDS |
TTATTCATCAAAATGGTGAG+AGG | 0.636658 | 8.2:+21153902 | None:intergenic |
CTTCAGTATAAGCGAAACAG+TGG | 0.637167 | 8.2:+21158223 | MS.gene011446:intron |
TCATCGTCTTCTCTACCACT+GGG | 0.652904 | 8.2:+21154047 | MS.gene011446:CDS |
AGAAAGTGTGCATGACGAGG+AGG | 0.669061 | 8.2:+21163695 | MS.gene011446:CDS |
AGGAATCCAAGAAAATACAC+AGG | 0.687928 | 8.2:+21158289 | MS.gene011446:CDS |
GAACTCATAGAGTTTCCCAG+TGG | 0.782754 | 8.2:-21154062 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 21153914 | 21163764 | 21153914 | ID=MS.gene011446 |
chr8.2 | mRNA | 21153914 | 21163764 | 21153914 | ID=MS.gene011446.t1;Parent=MS.gene011446 |
chr8.2 | exon | 21153914 | 21154095 | 21153914 | ID=MS.gene011446.t1.exon1;Parent=MS.gene011446.t1 |
chr8.2 | CDS | 21153914 | 21154095 | 21153914 | ID=cds.MS.gene011446.t1;Parent=MS.gene011446.t1 |
chr8.2 | exon | 21158229 | 21158310 | 21158229 | ID=MS.gene011446.t1.exon2;Parent=MS.gene011446.t1 |
chr8.2 | CDS | 21158229 | 21158310 | 21158229 | ID=cds.MS.gene011446.t1;Parent=MS.gene011446.t1 |
chr8.2 | exon | 21162894 | 21162955 | 21162894 | ID=MS.gene011446.t1.exon3;Parent=MS.gene011446.t1 |
chr8.2 | CDS | 21162894 | 21162955 | 21162894 | ID=cds.MS.gene011446.t1;Parent=MS.gene011446.t1 |
chr8.2 | exon | 21163073 | 21163172 | 21163073 | ID=MS.gene011446.t1.exon4;Parent=MS.gene011446.t1 |
chr8.2 | CDS | 21163073 | 21163172 | 21163073 | ID=cds.MS.gene011446.t1;Parent=MS.gene011446.t1 |
chr8.2 | exon | 21163261 | 21163302 | 21163261 | ID=MS.gene011446.t1.exon5;Parent=MS.gene011446.t1 |
chr8.2 | CDS | 21163261 | 21163302 | 21163261 | ID=cds.MS.gene011446.t1;Parent=MS.gene011446.t1 |
chr8.2 | exon | 21163423 | 21163464 | 21163423 | ID=MS.gene011446.t1.exon6;Parent=MS.gene011446.t1 |
chr8.2 | CDS | 21163423 | 21163464 | 21163423 | ID=cds.MS.gene011446.t1;Parent=MS.gene011446.t1 |
chr8.2 | exon | 21163639 | 21163764 | 21163639 | ID=MS.gene011446.t1.exon7;Parent=MS.gene011446.t1 |
chr8.2 | CDS | 21163639 | 21163764 | 21163639 | ID=cds.MS.gene011446.t1;Parent=MS.gene011446.t1 |
Gene Sequence |
Protein sequence |