AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011502

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011502.t1 MTR_4g101680 95.935 369 10 1 1 369 1 364 0.0 745
MS.gene011502.t1 MTR_4g036030 59.893 374 108 10 1 362 1 344 4.11e-146 417
MS.gene011502.t1 MTR_5g012080 60.313 383 104 16 1 369 1 349 3.89e-144 412
MS.gene011502.t1 MTR_5g021710 55.128 312 108 8 5 307 6 294 1.61e-105 314
MS.gene011502.t1 MTR_8g076110 52.077 313 106 4 5 315 4 274 1.09e-102 305
MS.gene011502.t1 MTR_8g024480 48.204 334 144 8 1 307 9 340 7.11e-87 269
MS.gene011502.t1 MTR_1g096430 74.359 156 40 0 1 156 1 156 4.84e-86 264
MS.gene011502.t1 MTR_2g062730 48.052 308 124 6 7 302 10 293 1.04e-83 258
MS.gene011502.t1 MTR_4g035590 75.497 151 36 1 7 157 8 157 5.86e-81 251
MS.gene011502.t1 MTR_2g064090 54.217 166 72 2 7 169 6 170 2.71e-62 203
MS.gene011502.t1 MTR_3g435150 60.127 158 54 3 7 159 16 169 2.29e-61 199
MS.gene011502.t1 MTR_6g084430 53.801 171 73 2 6 173 4 171 6.28e-61 199
MS.gene011502.t1 MTR_4g108760 60.000 155 53 3 7 156 17 167 3.23e-59 196
MS.gene011502.t1 MTR_6g477900 53.289 152 68 2 7 156 6 156 1.62e-58 190
MS.gene011502.t1 MTR_2g078700 57.143 161 60 3 5 159 21 178 3.21e-58 194
MS.gene011502.t1 MTR_3g064580 51.829 164 73 3 7 166 6 167 9.46e-57 196
MS.gene011502.t1 MTR_5g076850 50.867 173 76 3 7 171 6 177 5.38e-56 194
MS.gene011502.t1 MTR_3g109340 54.605 152 64 2 7 156 22 170 6.24e-56 187
MS.gene011502.t1 MTR_3g070030 53.797 158 59 3 8 157 20 171 1.54e-55 186
MS.gene011502.t1 MTR_6g012670 55.844 154 61 3 7 156 20 170 1.84e-55 184
MS.gene011502.t1 MTR_1g008740 56.494 154 60 4 7 156 13 163 2.41e-55 185
MS.gene011502.t1 MTR_4g081870 50.292 171 74 3 5 167 7 174 2.79e-55 182
MS.gene011502.t1 MTR_2g064470 54.321 162 66 3 5 163 9 165 2.87e-55 184
MS.gene011502.t1 MTR_1g008740 56.494 154 60 4 7 156 27 177 3.76e-55 185
MS.gene011502.t1 MTR_7g011130 53.409 176 55 4 10 165 22 190 5.34e-55 184
MS.gene011502.t1 MTR_7g085260 55.758 165 61 4 7 163 17 177 6.64e-55 185
MS.gene011502.t1 MTR_3g109340 54.248 153 64 3 7 156 22 171 1.00e-54 184
MS.gene011502.t1 MTR_1g069805 52.229 157 68 3 5 159 8 159 7.50e-54 179
MS.gene011502.t1 MTR_5g041940 49.689 161 72 2 6 160 2 159 7.56e-54 179
MS.gene011502.t1 MTR_7g085220 47.904 167 69 3 5 156 6 169 1.41e-53 180
MS.gene011502.t1 MTR_7g097090 53.289 152 64 3 5 154 8 154 2.33e-53 178
MS.gene011502.t1 MTR_8g467490 47.619 168 72 3 9 163 16 180 1.10e-52 179
MS.gene011502.t1 MTR_7g011120 54.321 162 54 3 10 157 11 166 2.61e-52 176
MS.gene011502.t1 MTR_7g005280 49.693 163 74 2 6 166 14 170 9.21e-52 173
MS.gene011502.t1 MTR_5g040420 47.337 169 74 3 7 163 14 179 1.01e-51 177
MS.gene011502.t1 MTR_5g014300 50.314 159 70 3 5 156 4 160 1.03e-51 175
MS.gene011502.t1 MTR_6g011860 46.328 177 78 4 1 163 9 182 1.42e-51 176
MS.gene011502.t1 MTR_6g032770 47.904 167 78 3 7 167 18 181 1.64e-51 176
MS.gene011502.t1 MTR_3g088110 49.390 164 74 3 1 159 1 160 2.69e-51 173
MS.gene011502.t1 MTR_8g094580 47.674 172 79 4 1 166 1 167 6.12e-51 172
MS.gene011502.t1 MTR_4g098630 51.592 157 70 3 5 156 4 159 8.73e-51 172
MS.gene011502.t1 MTR_3g093040 50.000 160 75 3 1 156 100 258 9.02e-51 172
MS.gene011502.t1 MTR_3g116070 51.190 168 71 4 7 171 23 182 9.91e-51 173
MS.gene011502.t1 MTR_3g096920 48.780 164 74 4 7 165 7 165 1.11e-50 171
MS.gene011502.t1 MTR_2g079990 51.316 152 69 2 7 156 16 164 1.78e-50 172
MS.gene011502.t1 MTR_2g080010 43.814 194 86 6 6 183 14 200 3.66e-50 172
MS.gene011502.t1 MTR_5g069030 50.955 157 74 2 3 157 21 176 1.28e-49 176
MS.gene011502.t1 MTR_3g096140 50.993 151 69 3 9 156 9 157 1.64e-49 168
MS.gene011502.t1 MTR_7g100990 49.057 159 70 3 6 156 10 165 2.35e-49 169
MS.gene011502.t1 MTR_4g089135 42.784 194 77 4 6 168 14 204 3.81e-49 169
MS.gene011502.t1 MTR_8g059170 45.882 170 85 2 7 172 14 180 4.26e-49 168
MS.gene011502.t1 MTR_8g063550 46.629 178 86 5 9 180 8 182 7.32e-49 168
MS.gene011502.t1 MTR_3g096140 50.993 151 69 3 9 156 9 157 1.47e-48 167
MS.gene011502.t1 MTR_3g093050 35.740 277 149 7 3 270 18 274 2.94e-48 172
MS.gene011502.t1 MTR_2g068880 45.455 176 76 4 7 164 21 194 3.74e-48 165
MS.gene011502.t1 MTR_1g090720 53.205 156 64 3 9 156 44 198 4.22e-48 169
MS.gene011502.t1 MTR_3g093050 35.740 277 149 7 3 270 18 274 4.85e-48 172
MS.gene011502.t1 MTR_8g063550 46.629 178 86 5 9 180 8 182 5.84e-48 168
MS.gene011502.t1 MTR_8g063550 46.629 178 86 5 9 180 8 182 7.55e-48 167
MS.gene011502.t1 MTR_2g068920 44.199 181 81 4 7 169 20 198 9.83e-48 164
MS.gene011502.t1 MTR_3g096920 51.701 147 67 2 7 153 7 149 9.88e-48 165
MS.gene011502.t1 MTR_2157s0010 46.061 165 70 4 7 156 8 168 1.29e-47 162
MS.gene011502.t1 MTR_4g134460 48.344 151 74 2 7 156 54 201 3.43e-47 166
MS.gene011502.t1 MTR_1g090723 48.148 162 80 3 9 167 10 170 5.34e-47 169
MS.gene011502.t1 MTR_2g093810 44.186 172 84 4 8 171 15 182 4.07e-46 160
MS.gene011502.t1 MTR_0036s0150 47.239 163 79 4 9 167 7 166 8.10e-46 164
MS.gene011502.t1 MTR_8g093580 43.750 192 100 5 9 195 8 196 9.77e-46 163
MS.gene011502.t1 MTR_1g097300 46.067 178 85 6 9 179 21 194 1.40e-45 164
MS.gene011502.t1 MTR_5g090970 45.732 164 72 4 7 156 18 178 2.10e-45 158
MS.gene011502.t1 MTR_1g090723 46.584 161 83 3 9 167 10 169 2.92e-45 164
MS.gene011502.t1 MTR_1g090723 49.333 150 73 3 9 156 10 158 3.02e-45 164
MS.gene011502.t1 MTR_2g079990 43.889 180 68 3 7 156 16 192 4.60e-45 159
MS.gene011502.t1 MTR_3g070040 49.032 155 63 3 11 157 12 158 6.84e-45 157
MS.gene011502.t1 MTR_4g075980 49.007 151 68 3 9 156 17 161 2.20e-44 155
MS.gene011502.t1 MTR_5g090970 45.732 164 71 5 7 156 18 177 1.55e-43 153
MS.gene011502.t1 MTR_8g099750 46.471 170 77 6 2 162 9 173 9.81e-43 149
MS.gene011502.t1 MTR_2g086880 47.586 145 69 2 9 153 20 157 6.41e-42 154
MS.gene011502.t1 MTR_2g086880 47.586 145 69 2 9 153 20 157 8.22e-42 154
MS.gene011502.t1 MTR_3g098810 41.618 173 84 3 2 162 9 176 9.94e-40 141
MS.gene011502.t1 MTR_3g096140 47.445 137 67 3 23 156 2 136 4.36e-39 142
MS.gene011502.t1 MTR_3g098810 46.377 138 65 2 2 135 9 141 4.70e-36 129
MS.gene011502.t1 MTR_8g023840 44.937 158 76 6 2 153 3 155 3.83e-35 133
MS.gene011502.t1 MTR_8g023860 43.871 155 79 5 3 154 8 157 1.47e-34 132
MS.gene011502.t1 MTR_4g052620 45.113 133 64 4 8 134 6 135 1.52e-33 125
MS.gene011502.t1 MTR_2g086690 41.509 159 78 7 8 154 5 160 7.28e-32 120
MS.gene011502.t1 MTR_4g094302 40.000 160 75 4 7 156 11 159 1.78e-31 118
MS.gene011502.t1 MTR_8g023900 35.377 212 114 8 7 211 12 207 1.31e-29 119
MS.gene011502.t1 MTR_8g023900 42.000 150 79 5 10 156 196 340 2.81e-27 112
MS.gene011502.t1 MTR_7g105170 36.420 162 92 4 6 156 3 164 2.42e-29 114
MS.gene011502.t1 MTR_4g094302 43.511 131 61 3 7 135 11 130 5.97e-29 110
MS.gene011502.t1 MTR_8g094580 46.364 110 51 3 63 166 6 113 3.07e-28 110
MS.gene011502.t1 MTR_8g023880 39.306 173 79 7 1 156 1 164 3.44e-28 111
MS.gene011502.t1 MTR_8g023930 39.216 153 85 5 7 156 24 171 2.15e-26 110
MS.gene011502.t1 MTR_7g070140 50.000 80 38 1 61 138 15 94 9.16e-22 90.5
MS.gene011502.t1 MTR_8g093790 33.133 166 86 7 7 172 10 150 1.65e-17 80.1
MS.gene011502.t1 MTR_7g070150 49.231 65 32 1 106 170 8 71 8.41e-16 72.4
MS.gene011502.t1 MTR_3g096400 31.765 170 91 6 1 155 1 160 6.63e-15 73.2
MS.gene011502.t1 MTR_7g083330 28.750 160 105 6 7 163 18 171 4.84e-14 70.5
MS.gene011502.t1 MTR_2g014680 28.655 171 98 7 1 154 47 210 3.94e-12 66.6
MS.gene011502.t1 MTR_7g116460 28.846 156 102 6 13 162 11 163 8.61e-12 64.3
MS.gene011502.t1 MTR_1g087190 52.083 48 22 1 9 55 7 54 2.33e-11 58.9
MS.gene011502.t1 MTR_4g078875 28.902 173 96 7 1 154 42 206 6.00e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011502.t1 AT1G12260 54.964 413 124 10 1 369 1 395 3.04e-145 417
MS.gene011502.t1 AT1G12260 55.882 374 128 10 1 369 1 342 7.83e-137 394
MS.gene011502.t1 AT1G62700 52.463 406 142 11 1 367 1 394 1.35e-129 377
MS.gene011502.t1 AT1G62700 52.463 406 142 11 1 367 1 394 1.35e-129 377
MS.gene011502.t1 AT4G36160 49.051 369 140 9 7 349 14 360 4.61e-108 322
MS.gene011502.t1 AT4G36160 49.051 369 140 9 7 349 10 356 5.55e-108 322
MS.gene011502.t1 AT4G36160 49.051 369 140 9 7 349 10 356 5.55e-108 322
MS.gene011502.t1 AT2G18060 52.147 326 124 7 7 318 9 316 3.39e-107 319
MS.gene011502.t1 AT2G18060 52.147 326 124 7 7 318 9 316 3.39e-107 319
MS.gene011502.t1 AT5G62380 49.555 337 130 7 1 322 1 312 1.21e-101 304
MS.gene011502.t1 AT5G62380 49.555 337 130 7 1 322 1 312 1.21e-101 304
MS.gene011502.t1 AT5G66300 50.804 311 104 6 7 304 12 286 5.94e-100 298
MS.gene011502.t1 AT2G46770 50.000 320 104 9 1 304 10 289 1.58e-90 276
MS.gene011502.t1 AT1G71930 44.025 318 128 5 5 311 7 285 1.91e-84 259
MS.gene011502.t1 AT1G71930 44.025 318 128 5 5 311 7 285 1.91e-84 259
MS.gene011502.t1 AT3G61910 46.082 319 108 7 1 304 5 274 2.77e-84 259
MS.gene011502.t1 AT1G32770 56.538 260 74 9 1 234 10 256 2.93e-84 260
MS.gene011502.t1 AT1G33280 72.185 151 41 1 7 157 8 157 3.79e-78 243
MS.gene011502.t1 AT4G10350 71.242 153 42 1 7 157 9 161 1.08e-77 243
MS.gene011502.t1 AT1G79580 73.377 154 35 3 7 157 17 167 1.38e-77 243
MS.gene011502.t1 AT1G79580 73.377 154 35 3 7 157 17 167 1.38e-77 243
MS.gene011502.t1 AT1G79580 73.377 154 35 3 7 157 17 167 1.38e-77 243
MS.gene011502.t1 AT1G79580 73.377 154 35 3 7 157 17 167 1.38e-77 243
MS.gene011502.t1 AT1G79580 73.377 154 35 3 7 157 17 167 1.38e-77 243
MS.gene011502.t1 AT3G18400 62.092 153 52 3 6 156 4 152 2.34e-63 205
MS.gene011502.t1 AT3G17730 55.263 152 65 2 7 156 6 156 2.02e-59 192
MS.gene011502.t1 AT2G24430 57.325 157 61 3 7 160 16 169 3.02e-59 194
MS.gene011502.t1 AT2G24430 57.325 157 61 3 7 160 16 169 3.02e-59 194
MS.gene011502.t1 AT5G61430 58.710 155 55 3 7 156 16 166 7.47e-59 194
MS.gene011502.t1 AT1G69490 54.717 159 63 2 5 157 7 162 3.56e-58 190
MS.gene011502.t1 AT3G10490 46.193 197 97 4 5 195 25 218 3.77e-58 189
MS.gene011502.t1 AT5G39610 58.974 156 55 3 7 157 20 171 3.98e-58 191
MS.gene011502.t1 AT5G07680 57.143 154 59 2 7 156 3 153 1.19e-57 190
MS.gene011502.t1 AT5G07680 57.143 154 59 2 7 156 17 167 2.28e-57 190
MS.gene011502.t1 AT5G17260 49.398 166 80 2 7 169 6 170 2.79e-57 194
MS.gene011502.t1 AT1G65910 55.195 154 62 3 7 156 6 156 3.12e-57 197
MS.gene011502.t1 AT3G10480 47.208 197 95 4 5 195 25 218 6.86e-57 192
MS.gene011502.t1 AT3G10490 47.150 193 93 4 9 195 29 218 8.43e-57 192
MS.gene011502.t1 AT1G54330 57.237 152 63 2 7 158 6 155 1.33e-56 187
MS.gene011502.t1 AT3G03200 53.595 153 67 2 7 156 6 157 2.41e-56 191
MS.gene011502.t1 AT1G76420 56.863 153 60 3 7 156 22 171 6.02e-56 186
MS.gene011502.t1 AT3G04070 44.928 207 83 5 5 186 8 208 7.64e-56 186
MS.gene011502.t1 AT3G10480 47.716 197 93 5 5 195 25 217 8.89e-56 189
MS.gene011502.t1 AT3G29035 57.692 156 57 3 7 157 24 175 1.70e-55 185
MS.gene011502.t1 AT5G18270 53.939 165 66 4 7 164 21 182 3.26e-55 184
MS.gene011502.t1 AT5G53950 56.688 157 59 3 6 156 16 169 4.28e-55 185
MS.gene011502.t1 AT3G04060 45.413 218 97 8 7 208 20 231 4.46e-55 184
MS.gene011502.t1 AT5G18270 53.939 165 66 4 7 164 21 182 4.83e-55 184
MS.gene011502.t1 AT3G12977 55.769 156 61 4 5 156 16 167 5.89e-55 182
MS.gene011502.t1 AT5G46590 54.487 156 66 3 5 156 4 158 1.50e-54 181
MS.gene011502.t1 AT3G15170 53.293 167 69 3 5 165 18 181 2.83e-54 181
MS.gene011502.t1 AT1G56010 52.147 163 69 3 5 161 17 176 9.89e-54 180
MS.gene011502.t1 AT5G04410 45.989 187 94 4 2 183 4 188 1.11e-52 183
MS.gene011502.t1 AT2G43000 39.286 252 121 6 9 255 20 244 3.30e-52 175
MS.gene011502.t1 AT5G63790 47.399 173 80 3 6 171 49 217 3.73e-52 176
MS.gene011502.t1 AT5G63790 47.399 173 80 3 6 171 59 227 4.28e-52 176
MS.gene011502.t1 AT4G27410 52.632 152 67 2 7 156 14 162 5.47e-52 175
MS.gene011502.t1 AT5G46590 59.091 132 52 2 5 135 4 134 9.37e-52 174
MS.gene011502.t1 AT3G04070 41.704 223 83 6 5 186 8 224 9.49e-52 176
MS.gene011502.t1 AT2G33480 51.316 152 68 1 6 157 14 159 1.51e-51 173
MS.gene011502.t1 AT1G33060 51.634 153 69 3 7 156 24 174 1.78e-51 182
MS.gene011502.t1 AT1G33060 51.634 153 69 3 7 156 24 174 1.95e-51 181
MS.gene011502.t1 AT3G10480 41.739 230 92 6 5 195 25 251 3.01e-51 179
MS.gene011502.t1 AT2G33480 51.299 154 67 3 6 157 14 161 3.33e-51 172
MS.gene011502.t1 AT4G35580 51.282 156 73 2 3 156 5 159 3.33e-51 178
MS.gene011502.t1 AT1G01720 46.746 169 80 3 1 163 1 165 3.74e-51 172
MS.gene011502.t1 AT4G35580 51.572 159 68 3 3 156 5 159 3.91e-51 179
MS.gene011502.t1 AT4G35580 51.572 159 68 3 3 156 5 159 3.93e-51 179
MS.gene011502.t1 AT5G08790 47.191 178 82 4 1 171 1 173 4.80e-51 172
MS.gene011502.t1 AT5G39820 47.429 175 64 4 7 156 20 191 7.10e-51 173
MS.gene011502.t1 AT3G10500 43.979 191 99 4 2 186 4 192 7.38e-51 178
MS.gene011502.t1 AT1G61110 47.904 167 67 4 6 156 15 177 1.34e-50 172
MS.gene011502.t1 AT3G15500 49.686 159 74 3 7 163 14 168 1.61e-50 172
MS.gene011502.t1 AT4G17980 50.633 158 71 3 5 156 4 160 3.87e-50 169
MS.gene011502.t1 AT1G77450 45.833 168 82 3 8 170 11 174 4.00e-50 169
MS.gene011502.t1 AT1G52890 46.746 169 83 3 7 173 14 177 8.28e-50 170
MS.gene011502.t1 AT4G17980 50.633 158 71 3 5 156 4 160 9.56e-50 169
MS.gene011502.t1 AT4G27410 48.795 166 69 3 7 156 14 179 1.02e-49 169
MS.gene011502.t1 AT1G32510 46.154 169 80 3 5 163 4 171 1.48e-49 168
MS.gene011502.t1 AT4G10350 71.296 108 29 1 52 157 7 114 1.85e-49 168
MS.gene011502.t1 AT4G28530 49.708 171 61 5 5 156 8 172 4.15e-49 169
MS.gene011502.t1 AT1G26870 45.833 168 75 3 9 163 18 182 6.35e-49 170
MS.gene011502.t1 AT2G18060 41.633 245 111 7 88 318 2 228 3.70e-48 164
MS.gene011502.t1 AT5G24590 31.267 371 218 14 3 348 9 367 1.83e-47 167
MS.gene011502.t1 AT5G13180 46.541 159 76 3 2 157 9 161 9.88e-47 160
MS.gene011502.t1 AT2G02450 47.020 151 76 2 7 156 51 198 2.66e-46 162
MS.gene011502.t1 AT2G02450 47.020 151 76 2 7 156 51 198 2.78e-46 163
MS.gene011502.t1 AT3G15510 47.531 162 65 4 11 156 21 178 6.83e-46 161
MS.gene011502.t1 AT5G22290 46.309 149 74 2 5 153 19 161 9.15e-45 157
MS.gene011502.t1 AT1G34180 45.333 150 79 2 9 156 18 166 1.05e-44 160
MS.gene011502.t1 AT2G27300 43.636 165 83 3 5 166 12 169 1.32e-44 157
MS.gene011502.t1 AT5G09330 41.667 192 102 6 5 189 4 192 1.64e-44 160
MS.gene011502.t1 AT5G09330 41.667 192 102 6 5 189 4 192 1.64e-44 160
MS.gene011502.t1 AT5G09330 41.667 192 102 6 5 189 4 192 1.64e-44 160
MS.gene011502.t1 AT5G09330 41.667 192 102 6 5 189 4 192 1.64e-44 160
MS.gene011502.t1 AT5G09330 41.667 192 102 6 5 189 4 192 1.64e-44 160
MS.gene011502.t1 AT1G34180 32.432 296 170 10 9 279 18 308 3.97e-44 160
MS.gene011502.t1 AT1G52880 47.619 168 69 4 11 163 21 184 4.41e-44 155
MS.gene011502.t1 AT3G49530 45.223 157 82 4 3 156 9 164 5.28e-44 157
MS.gene011502.t1 AT1G34190 43.750 176 88 6 9 177 18 189 6.67e-44 159
MS.gene011502.t1 AT5G64060 45.161 155 80 3 5 156 4 156 1.77e-43 154
MS.gene011502.t1 AT3G49530 45.223 157 82 4 3 156 9 164 1.91e-43 157
MS.gene011502.t1 AT2G17040 44.371 151 75 3 9 156 8 152 2.40e-43 152
MS.gene011502.t1 AT5G04395 47.682 151 66 3 5 142 26 176 1.79e-42 147
MS.gene011502.t1 AT1G34180 43.293 164 74 4 9 156 18 178 6.02e-42 152
MS.gene011502.t1 AT1G34180 31.935 310 165 12 9 279 18 320 1.94e-41 153
MS.gene011502.t1 AT3G12910 43.023 172 73 5 9 160 23 189 2.22e-41 147
MS.gene011502.t1 AT3G44290 41.139 158 83 4 9 163 16 166 1.09e-40 143
MS.gene011502.t1 AT3G44290 41.139 158 83 4 9 163 16 166 1.33e-39 144
MS.gene011502.t1 AT5G61430 59.813 107 34 3 55 156 1 103 2.91e-38 138
MS.gene011502.t1 AT3G12977 56.481 108 41 2 52 156 10 114 7.65e-37 133
MS.gene011502.t1 AT1G56010 58.824 102 37 1 65 161 8 109 1.04e-36 134
MS.gene011502.t1 AT1G32870 41.818 165 89 3 7 167 10 171 2.59e-35 135
MS.gene011502.t1 AT1G32870 41.818 165 89 3 7 167 10 171 2.87e-35 135
MS.gene011502.t1 AT1G32870 41.818 165 89 3 7 167 46 207 5.59e-35 135
MS.gene011502.t1 AT2G33480 51.961 102 47 2 58 157 3 104 2.77e-32 120
MS.gene011502.t1 AT5G22380 40.769 130 69 4 10 133 8 135 5.64e-27 107
MS.gene011502.t1 AT3G44350 33.714 175 100 8 10 175 8 175 1.02e-25 104
MS.gene011502.t1 AT3G44350 38.931 131 71 5 10 134 8 135 1.56e-25 101
MS.gene011502.t1 AT3G10490 42.857 119 60 3 83 195 2 118 2.40e-25 105
MS.gene011502.t1 AT3G10490 42.857 119 60 3 83 195 2 118 2.40e-25 105
MS.gene011502.t1 AT1G02230 45.802 131 62 6 8 133 4 130 2.82e-25 105
MS.gene011502.t1 AT4G01550 38.158 152 84 5 10 156 7 153 4.44e-25 106
MS.gene011502.t1 AT4G01520 35.762 151 88 5 8 153 5 151 5.02e-25 103
MS.gene011502.t1 AT3G04420 42.188 128 71 3 8 133 4 130 2.25e-24 101
MS.gene011502.t1 AT4G01540 36.242 149 86 5 10 153 7 151 3.94e-24 102
MS.gene011502.t1 AT3G04420 42.188 128 71 3 8 133 4 130 5.80e-24 101
MS.gene011502.t1 AT1G02250 45.038 131 63 5 8 133 4 130 5.81e-24 101
MS.gene011502.t1 AT4G01540 36.242 149 86 5 10 153 7 151 7.01e-24 102
MS.gene011502.t1 AT5G64530 36.905 168 73 6 7 156 3 155 1.17e-23 97.1
MS.gene011502.t1 AT4G01540 36.242 149 86 5 10 153 7 151 1.18e-23 101
MS.gene011502.t1 AT4G01540 36.242 149 86 5 10 153 7 151 1.27e-23 102
MS.gene011502.t1 AT5G64530 42.748 131 58 5 7 135 3 118 2.42e-23 95.5
MS.gene011502.t1 AT2G43000 33.333 189 97 5 72 255 2 166 6.77e-23 95.5
MS.gene011502.t1 AT4G28530 28.216 241 79 7 5 193 8 206 1.57e-21 94.4
MS.gene011502.t1 AT1G02220 40.310 129 71 4 7 133 3 127 1.53e-19 89.7
MS.gene011502.t1 AT3G56530 30.872 149 99 2 8 154 53 199 5.73e-19 87.0
MS.gene011502.t1 AT1G01010 31.053 190 104 9 10 187 6 180 7.97e-19 87.8
MS.gene011502.t1 AT5G50820 34.965 143 68 6 6 139 16 142 5.75e-18 81.6
MS.gene011502.t1 AT5G22290 44.928 69 34 1 89 157 2 66 3.62e-16 77.8
MS.gene011502.t1 AT3G55210 28.090 178 108 7 2 165 5 176 1.96e-14 73.2
MS.gene011502.t1 AT5G14000 27.273 165 112 3 1 163 9 167 2.03e-13 68.9
MS.gene011502.t1 AT5G14000 29.197 137 90 2 1 135 9 140 2.18e-13 67.8
MS.gene011502.t1 AT3G04430 34.328 134 71 6 13 133 6 135 3.66e-11 62.4
MS.gene011502.t1 AT1G28470 29.697 165 92 6 7 154 77 234 4.74e-11 63.5

Find 67 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCTTCACTCACTTTA+TGG 0.109284 8.2:+21721836 MS.gene011502:CDS
AATATACTCAAAACAATTTC+TGG 0.230974 8.2:+21718104 MS.gene011502:CDS
GGTGAGAATTGGTTCGGGTT+GGG 0.250402 8.2:-21721583 None:intergenic
CAAACAGAATTATGCAAAAT+AGG 0.259681 8.2:+21717961 MS.gene011502:intron
CAATCAGATTTCTGTCCATT+TGG 0.277247 8.2:-21718168 None:intergenic
GCATGAGCATGATGATTATA+AGG 0.293277 8.2:-21721743 None:intergenic
GAGCAACAAAAGCAGGATTC+TGG 0.295790 8.2:+21718058 MS.gene011502:CDS
TATTGCATTAATTCTAGTTC+TGG 0.299193 8.2:-21721638 None:intergenic
AATCAGATTTCTGTCCATTT+GGG 0.310097 8.2:-21718167 None:intergenic
GTGAGAATTGGTTCGGGTTG+GGG 0.323739 8.2:-21721582 None:intergenic
CGTCTTGAAACTAATCAAAA+TGG 0.327333 8.2:+21718207 MS.gene011502:CDS
TAGGAGGGTGAGAATTGGTT+CGG 0.394916 8.2:-21721589 None:intergenic
ATGATCAATCACCATGTAAC+TGG 0.399685 8.2:+21721522 MS.gene011502:CDS
CATGAGCATGATGATTATAA+GGG 0.417661 8.2:-21721742 None:intergenic
ACTCAAAACAATTTCTGGTT+GGG 0.418569 8.2:+21718109 MS.gene011502:CDS
CCAGAGTTCCATGTGGCAAC+TGG 0.420939 8.2:-21722104 None:intergenic
AGGAGGGTGAGAATTGGTTC+GGG 0.425538 8.2:-21721588 None:intergenic
GAGTGGTATGAAGTATAGTT+AGG 0.433410 8.2:-21721608 None:intergenic
GAAAACTAGCATCATGGTAT+TGG 0.436544 8.2:-21721673 None:intergenic
GGCTTTCAAGGTGTGGAAGT+TGG 0.437985 8.2:-21721697 None:intergenic
CGGGTTGGGGATTCAAGATC+TGG 0.439654 8.2:-21721569 None:intergenic
CTATTCGTTCTAGTTCCTGT+TGG 0.449896 8.2:-21718036 None:intergenic
AAGAAGGATGGGTTGTATGC+AGG 0.452985 8.2:+21721456 MS.gene011502:CDS
CTAGTTCTGGTTTGCATGAG+TGG 0.455930 8.2:-21721625 None:intergenic
TACTCAAAACAATTTCTGGT+TGG 0.456891 8.2:+21718108 MS.gene011502:CDS
ATAGTTAGGAGGGTGAGAAT+TGG 0.460967 8.2:-21721594 None:intergenic
TAATCAAAATGGAATTTCTC+AGG 0.470538 8.2:+21718218 MS.gene011502:CDS
AACTAGCATCATGGTATTGG+TGG 0.481901 8.2:-21721670 None:intergenic
ATGATGAACAAGTTACTGAT+TGG 0.483191 8.2:+21721879 MS.gene011502:CDS
AGAAGGATGGGTTGTATGCA+GGG 0.483470 8.2:+21721457 MS.gene011502:CDS
AAAGATAAGAAGTATCCAAC+AGG 0.484211 8.2:+21718021 MS.gene011502:CDS
TACAAAGGACGTGCCCCAAA+TGG 0.485596 8.2:+21718153 MS.gene011502:CDS
ACGAATAGAGCAACAAAAGC+AGG 0.489114 8.2:+21718051 MS.gene011502:CDS
CCAGTTGCCACATGGAACTC+TGG 0.492908 8.2:+21722104 MS.gene011502:CDS
TGGTATGAAGTATAGTTAGG+AGG 0.495788 8.2:-21721605 None:intergenic
ATTGAACCATGGGATCTTCA+AGG 0.495896 8.2:+21717693 MS.gene011502:CDS
GGTATGAAGTATAGTTAGGA+GGG 0.496460 8.2:-21721604 None:intergenic
TCAACAAGTTCTTCATCAGT+TGG 0.499544 8.2:-21717597 None:intergenic
AACTTGTTGATTACTACCTC+AGG 0.500136 8.2:+21717610 MS.gene011502:CDS
CAAATGGACAGAAATCTGAT+TGG 0.510953 8.2:+21718169 MS.gene011502:CDS
GTTGGATGAAAACGAAAGCC+TGG 0.518219 8.2:-21717579 None:intergenic
TATTGCTTTGTCTCTTCCTG+TGG 0.520396 8.2:-21718085 None:intergenic
GGGTGAGAATTGGTTCGGGT+TGG 0.520526 8.2:-21721584 None:intergenic
TCTCTATAAAATTGAACCAT+GGG 0.531197 8.2:+21717683 MS.gene011502:CDS
TGATTACTACCTCAGGAAGA+AGG 0.532222 8.2:+21717617 MS.gene011502:CDS
CACATGAAGAATAGCTGCAT+TGG 0.548314 8.2:-21722005 None:intergenic
ATCTCTATAAAATTGAACCA+TGG 0.552588 8.2:+21717682 MS.gene011502:CDS
ACTAGCATCATGGTATTGGT+GGG 0.553019 8.2:-21721669 None:intergenic
TATGGTGGTAACAGCAGTAA+TGG 0.564737 8.2:+21721854 MS.gene011502:CDS
TAACTTGTACTGCAGGAAGA+AGG 0.571751 8.2:+21721440 MS.gene011502:intron
CAATGCAGCTATTCTTCATG+TGG 0.572344 8.2:+21722006 MS.gene011502:CDS
TTGTACTGCAGGAAGAAGGA+TGG 0.572577 8.2:+21721444 MS.gene011502:intron
ATCAGATTTCTGTCCATTTG+GGG 0.575645 8.2:-21718166 None:intergenic
GAAGTGATGAACAAAATGAC+TGG 0.576909 8.2:+21717983 MS.gene011502:CDS
GCAGGATTCTGGAAAGCCAC+AGG 0.582522 8.2:+21718069 MS.gene011502:CDS
GTTGGAGAAAACTAGCATCA+TGG 0.589690 8.2:-21721679 None:intergenic
TTCTACCTCCAGTTGCCACA+TGG 0.595602 8.2:+21722096 MS.gene011502:CDS
GGATTCAAGATCTGGCATGA+AGG 0.597988 8.2:-21721561 None:intergenic
TGTACTGCAGGAAGAAGGAT+GGG 0.607538 8.2:+21721445 MS.gene011502:intron
TGATCATCATACCAGTTACA+TGG 0.608098 8.2:-21721533 None:intergenic
TCGATACCTTGAAGATCCCA+TGG 0.613286 8.2:-21717699 None:intergenic
GAGTTCCATGTGGCAACTGG+AGG 0.627769 8.2:-21722101 None:intergenic
AATCTTCACTCACTTTATGG+TGG 0.628619 8.2:+21721839 MS.gene011502:CDS
CTAGCATCATGGTATTGGTG+GGG 0.638906 8.2:-21721668 None:intergenic
TAGACGATACCTTCTTCCTG+AGG 0.649052 8.2:-21717626 None:intergenic
TTCACTTCCAGAGTTCCATG+TGG 0.729412 8.2:-21722111 None:intergenic
GGATGAAAACGAAAGCCTGG+AGG 0.739180 8.2:-21717576 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+GGG - chr8.2:21721966-21721947 None:intergenic 0.0%
!! TAATAATAATAATAATAATA+AGG - chr8.2:21718824-21718843 None:intergenic 0.0%
!! TATTATTATTATAAAATTTA+GGG + chr8.2:21718995-21719014 MS.gene011502:intron 0.0%
!! TTATTATTATTATAAAATTT+AGG + chr8.2:21718994-21719013 MS.gene011502:intron 0.0%
!! AAGAGTTATTATAAATATTA+AGG - chr8.2:21721211-21721230 None:intergenic 10.0%
!! AGAGTTATTATAAATATTAA+GGG - chr8.2:21721210-21721229 None:intergenic 10.0%
!! TATTTAGTAAATATATTTCA+AGG - chr8.2:21719727-21719746 None:intergenic 10.0%
!! TTGTAAAAATAAAAAAATCA+TGG - chr8.2:21719688-21719707 None:intergenic 10.0%
!! TTTATTAAATGATAGTTATA+AGG - chr8.2:21719505-21719524 None:intergenic 10.0%
!!! ATATATGTTAATTATGTTTT+CGG + chr8.2:21719527-21719546 MS.gene011502:intron 10.0%
!! AAAAAAAAATCTTATGTGAT+CGG + chr8.2:21720250-21720269 MS.gene011502:intron 15.0%
!! AAAAAAATTGTGAGATAATA+TGG - chr8.2:21717760-21717779 None:intergenic 15.0%
!! AAAAATTACGTATTAATTAG+CGG - chr8.2:21719764-21719783 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr8.2:21718644-21718663 None:intergenic 15.0%
!! CAATATTATTTATAATGATG+AGG + chr8.2:21719408-21719427 MS.gene011502:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr8.2:21718645-21718664 None:intergenic 15.0%
!! TGAAAACAAAAAATTATACT+AGG + chr8.2:21717782-21717801 MS.gene011502:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - chr8.2:21718709-21718728 None:intergenic 15.0%
!!! ATAAAATTTAGGGTTAAATA+AGG + chr8.2:21719005-21719024 MS.gene011502:intron 15.0%
!!! ATAATAGATTGAGTAATTTT+TGG - chr8.2:21721722-21721741 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - chr8.2:21718710-21718729 None:intergenic 15.0%
!!! TAATAGATTGAGTAATTTTT+GGG - chr8.2:21721721-21721740 None:intergenic 15.0%
!!! TTACTTATTTTGATAAGAAA+TGG + chr8.2:21719640-21719659 MS.gene011502:intron 15.0%
!!! TTGAAACTTTTAAAACTTAA+AGG - chr8.2:21720441-21720460 None:intergenic 15.0%
!! AAAACAAAATCATCCTAATA+TGG - chr8.2:21720734-21720753 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr8.2:21718685-21718704 None:intergenic 20.0%
!! AAATCTATAACTTCAGATAA+AGG + chr8.2:21719818-21719837 MS.gene011502:intron 20.0%
!! AAATTTATTCAAAAACGTGA+AGG + chr8.2:21719306-21719325 MS.gene011502:intron 20.0%
!! AACACAAATATAAATCGTTT+AGG - chr8.2:21718480-21718499 None:intergenic 20.0%
!! AAGTTTCAAAAGTTTCAAAT+AGG - chr8.2:21720579-21720598 None:intergenic 20.0%
!! AATATACTCAAAACAATTTC+TGG + chr8.2:21718104-21718123 MS.gene011502:CDS 20.0%
!! AATATATTGTTGAAAGATTG+CGG - chr8.2:21721023-21721042 None:intergenic 20.0%
!! AATTTATTCAAAAACGTGAA+GGG + chr8.2:21719307-21719326 MS.gene011502:intron 20.0%
!! AGACTAAATCTAAATCATTT+AGG + chr8.2:21718361-21718380 MS.gene011502:intron 20.0%
!! ATAAAAAAGCAAAAAGAAGA+AGG - chr8.2:21718251-21718270 None:intergenic 20.0%
!! ATATGTTTGCAAAATTTCAA+AGG - chr8.2:21719140-21719159 None:intergenic 20.0%
!! ATGGAAGAAATGAAAAATAT+AGG - chr8.2:21720715-21720734 None:intergenic 20.0%
!! ATTTCCATAAATTTGTATTC+TGG - chr8.2:21720047-21720066 None:intergenic 20.0%
!! GAAATAGTTTATCAACTAAA+AGG - chr8.2:21720470-21720489 None:intergenic 20.0%
!! TAGACTATATTTAAGAGTTT+AGG - chr8.2:21720839-21720858 None:intergenic 20.0%
!!! AATTTTGCAAACATATTTAG+TGG + chr8.2:21719144-21719163 MS.gene011502:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - chr8.2:21718708-21718727 None:intergenic 20.0%
!!! ATAATATGGATTGATTGTTA+AGG - chr8.2:21717746-21717765 None:intergenic 20.0%
!!! ATCACTACTTTTAGATAATA+AGG - chr8.2:21719861-21719880 None:intergenic 20.0%
!!! CCAATAAAAGATAATTTTAG+AGG + chr8.2:21720021-21720040 MS.gene011502:intron 20.0%
!!! CCTATTTTAAACTTTTGAAA+CGG - chr8.2:21720500-21720519 None:intergenic 20.0%
!!! CCTCTAAAATTATCTTTTAT+TGG - chr8.2:21720024-21720043 None:intergenic 20.0%
!!! GAAAATTTTGTCAAACTAAA+AGG + chr8.2:21720671-21720690 MS.gene011502:intron 20.0%
!!! TCTAGCAATTTTTTTTAACA+AGG + chr8.2:21719181-21719200 MS.gene011502:intron 20.0%
!!! TCTTATCTATCTTTTTCTAT+TGG - chr8.2:21720883-21720902 None:intergenic 20.0%
!!! TTCTTCTTTTTGCTTTTTTA+TGG + chr8.2:21718250-21718269 MS.gene011502:intron 20.0%
!!! TTGAAACTTTTGAAACTTAA+AGG + chr8.2:21720581-21720600 MS.gene011502:intron 20.0%
!!! TTTTTCATTTCTTCCATATT+AGG + chr8.2:21720718-21720737 MS.gene011502:intron 20.0%
! AAAAAATCGGTACTAAAGAT+GGG - chr8.2:21718792-21718811 None:intergenic 25.0%
! AAAAATGCACACATATAACT+CGG - chr8.2:21720217-21720236 None:intergenic 25.0%
! AAAATAAAAAAATCATGGCG+TGG - chr8.2:21719683-21719702 None:intergenic 25.0%
! AAGTTTCGAAAGTTTCAATT+AGG - chr8.2:21720638-21720657 None:intergenic 25.0%
! ACACGCAATAAAATTTATTG+TGG + chr8.2:21720976-21720995 MS.gene011502:intron 25.0%
! AGAAAATAAGTCAGTTATTC+CGG - chr8.2:21718562-21718581 None:intergenic 25.0%
! ATCTCTATAAAATTGAACCA+TGG + chr8.2:21717682-21717701 MS.gene011502:CDS 25.0%
! ATTCTCATACAAATACAAGA+AGG + chr8.2:21718385-21718404 MS.gene011502:intron 25.0%
! CAAAATAAGTAAAATGTACG+TGG - chr8.2:21719632-21719651 None:intergenic 25.0%
! CAAACAGAATTATGCAAAAT+AGG + chr8.2:21717961-21717980 MS.gene011502:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr8.2:21718686-21718705 None:intergenic 25.0%
! TAATCAAAATGGAATTTCTC+AGG + chr8.2:21718218-21718237 MS.gene011502:CDS 25.0%
! TATATTTAAGAGTTTAGGAG+AGG - chr8.2:21720834-21720853 None:intergenic 25.0%
! TCTCTATAAAATTGAACCAT+GGG + chr8.2:21717683-21717702 MS.gene011502:CDS 25.0%
! TGCAATGAAATACTTGAATA+TGG - chr8.2:21720109-21720128 None:intergenic 25.0%
! TTGAAACTTTCGAAACTTAA+AGG + chr8.2:21720640-21720659 MS.gene011502:intron 25.0%
!! AAAATTATACTAGGAGTACA+AGG + chr8.2:21717791-21717810 MS.gene011502:intron 25.0%
!! AAGACTCTAGTATTTTACAA+AGG + chr8.2:21718138-21718157 MS.gene011502:CDS 25.0%
!! CCGTTTCAAAAGTTTAAAAT+AGG + chr8.2:21720497-21720516 MS.gene011502:intron 25.0%
!! CCTTTAAGTTTCAAACTAAA+AGG - chr8.2:21720524-21720543 None:intergenic 25.0%
!! TATAGGTCAAATATCACTTT+TGG - chr8.2:21720698-21720717 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - chr8.2:21718598-21718617 None:intergenic 25.0%
!!! AAGTTGTGATGAAAAGTATT+CGG + chr8.2:21719362-21719381 MS.gene011502:intron 25.0%
!!! ATTTGATGCATTTTTGTTGT+TGG + chr8.2:21720923-21720942 MS.gene011502:intron 25.0%
!!! CCTTTTAGTTTGAAACTTAA+AGG + chr8.2:21720521-21720540 MS.gene011502:intron 25.0%
!!! TATTGCATTAATTCTAGTTC+TGG - chr8.2:21721641-21721660 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr8.2:21718597-21718616 None:intergenic 25.0%
!!! TTGTTTTTAAGTCAACTCAT+GGG - chr8.2:21719335-21719354 None:intergenic 25.0%
!!! TTTGATGCATTTTTGTTGTT+GGG + chr8.2:21720924-21720943 MS.gene011502:intron 25.0%
!!! TTTTTTTGCATCCAACTTAA+AGG - chr8.2:21720407-21720426 None:intergenic 25.0%
AAAATCTTATGTGATCGGTT+TGG + chr8.2:21720255-21720274 MS.gene011502:intron 30.0%
AAAATGCACACATATAACTC+GGG - chr8.2:21720216-21720235 None:intergenic 30.0%
AACATTATCAGTTGAGTTTG+CGG - chr8.2:21720155-21720174 None:intergenic 30.0%
AAGGGAAGAGATGAAAAAAT+CGG - chr8.2:21718805-21718824 None:intergenic 30.0%
AATCAGATTTCTGTCCATTT+GGG - chr8.2:21718170-21718189 None:intergenic 30.0%
ATATGAATCAAAAGTCGTGA+CGG - chr8.2:21719095-21719114 None:intergenic 30.0%
ATGATGAACAAGTTACTGAT+TGG + chr8.2:21721879-21721898 MS.gene011502:CDS 30.0%
ATTGCGGATATAAGTATGTA+GGG - chr8.2:21721007-21721026 None:intergenic 30.0%
CAAAATCTTCACTCACTTTA+TGG + chr8.2:21721836-21721855 MS.gene011502:CDS 30.0%
CATGAGCATGATGATTATAA+GGG - chr8.2:21721745-21721764 None:intergenic 30.0%
CCATCAATACATATCTCAAA+AGG + chr8.2:21721150-21721169 MS.gene011502:intron 30.0%
CGTCTTGAAACTAATCAAAA+TGG + chr8.2:21718207-21718226 MS.gene011502:CDS 30.0%
GAAAAAATCGGTACTAAAGA+TGG - chr8.2:21718793-21718812 None:intergenic 30.0%
GAAAATAAGTCAGTTATTCC+GGG - chr8.2:21718561-21718580 None:intergenic 30.0%
GAGTTAAAATCGTAGTTCAT+AGG - chr8.2:21721091-21721110 None:intergenic 30.0%
TCAAAAGGTTATAATCGATG+TGG + chr8.2:21721165-21721184 MS.gene011502:intron 30.0%
TCAAATTAGACATTACGTTC+AGG - chr8.2:21721255-21721274 None:intergenic 30.0%
TCACATATTCTTCATACGTT+TGG - chr8.2:21719919-21719938 None:intergenic 30.0%
TCTGTGTGAAAAATCAAAGT+AGG + chr8.2:21718731-21718750 MS.gene011502:intron 30.0%
TGAAACTTAAAGGACTAACT+TGG + chr8.2:21720531-21720550 MS.gene011502:intron 30.0%
TGGGAACAAAAAACAATAAG+AGG + chr8.2:21720943-21720962 MS.gene011502:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr8.2:21718701-21718720 None:intergenic 30.0%
! ACTATTATAACTTGTACTGC+AGG + chr8.2:21721433-21721452 MS.gene011502:intron 30.0%
! CAAAAAGAATGATGTTTCTG+AGG + chr8.2:21722060-21722079 MS.gene011502:CDS 30.0%
! CGTGGAGTAAAATTGATAAT+TGG - chr8.2:21719614-21719633 None:intergenic 30.0%
! CTCAGAAACATCATTCTTTT+TGG - chr8.2:21722062-21722081 None:intergenic 30.0%
! GTTCATAGGATTTGCAATTT+TGG - chr8.2:21721077-21721096 None:intergenic 30.0%
!! AAAGATAAGAAGTATCCAAC+AGG + chr8.2:21718021-21718040 MS.gene011502:CDS 30.0%
!! ACAACATTTAGGTTTTGTAG+AGG - chr8.2:21719072-21719091 None:intergenic 30.0%
!! ACTCAAAACAATTTCTGGTT+GGG + chr8.2:21718109-21718128 MS.gene011502:CDS 30.0%
!! CAACATTTAGGTTTTGTAGA+GGG - chr8.2:21719071-21719090 None:intergenic 30.0%
!! GATAACACAACATTTGCTAT+TGG + chr8.2:21717928-21717947 MS.gene011502:intron 30.0%
!! TACTCAAAACAATTTCTGGT+TGG + chr8.2:21718108-21718127 MS.gene011502:CDS 30.0%
!! TGTGTATACTTTCTGCTTTT+AGG + chr8.2:21721337-21721356 MS.gene011502:intron 30.0%
!!! ACCATTTTGCTTTAAGAACA+AGG + chr8.2:21718324-21718343 MS.gene011502:intron 30.0%
!!! CCTTTTGAGATATGTATTGA+TGG - chr8.2:21721153-21721172 None:intergenic 30.0%
!!! CTTGTTTTTAAGTCAACTCA+TGG - chr8.2:21719336-21719355 None:intergenic 30.0%
!!! GTCAATGCTGTTTTTGTTTT+TGG - chr8.2:21720313-21720332 None:intergenic 30.0%
!!! TTAAACTTTTGAAACGGTGA+TGG - chr8.2:21720494-21720513 None:intergenic 30.0%
!!! TTGCATTAGTTTTATGCAGT+CGG + chr8.2:21720124-21720143 MS.gene011502:intron 30.0%
!!! TTTTGGCTTGAAAATTCCAA+CGG - chr8.2:21721060-21721079 None:intergenic 30.0%
AATCTTCACTCACTTTATGG+TGG + chr8.2:21721839-21721858 MS.gene011502:CDS 35.0%
ATCAGATTTCTGTCCATTTG+GGG - chr8.2:21718169-21718188 None:intergenic 35.0%
ATCGAACGCATAGATATCAA+TGG - chr8.2:21721408-21721427 None:intergenic 35.0%
ATGATCAATCACCATGTAAC+TGG + chr8.2:21721522-21721541 MS.gene011502:CDS 35.0%
ATTTAAGAGTTTAGGAGAGG+AGG - chr8.2:21720831-21720850 None:intergenic 35.0%
CAAATGGACAGAAATCTGAT+TGG + chr8.2:21718169-21718188 MS.gene011502:CDS 35.0%
CAATCAGATTTCTGTCCATT+TGG - chr8.2:21718171-21718190 None:intergenic 35.0%
CTCAAGTTAGTCCTTTAAGT+TGG + chr8.2:21720393-21720412 MS.gene011502:intron 35.0%
GAAAACTAGCATCATGGTAT+TGG - chr8.2:21721676-21721695 None:intergenic 35.0%
GAAGTGATGAACAAAATGAC+TGG + chr8.2:21717983-21718002 MS.gene011502:CDS 35.0%
GAGGCCAGAATACAAATTTA+TGG + chr8.2:21720040-21720059 MS.gene011502:intron 35.0%
GAGTGGTATGAAGTATAGTT+AGG - chr8.2:21721611-21721630 None:intergenic 35.0%
GATTGCGGATATAAGTATGT+AGG - chr8.2:21721008-21721027 None:intergenic 35.0%
GCAAAATGGTACATATCTAG+AGG - chr8.2:21718314-21718333 None:intergenic 35.0%
GCATGAGCATGATGATTATA+AGG - chr8.2:21721746-21721765 None:intergenic 35.0%
GGTATGAAGTATAGTTAGGA+GGG - chr8.2:21721607-21721626 None:intergenic 35.0%
TCAACAAGTTCTTCATCAGT+TGG - chr8.2:21717600-21717619 None:intergenic 35.0%
TGGTATGAAGTATAGTTAGG+AGG - chr8.2:21721608-21721627 None:intergenic 35.0%
TGTGAAAAATCAAAGTAGGC+CGG + chr8.2:21718735-21718754 MS.gene011502:intron 35.0%
TTTAAGAGTTTAGGAGAGGA+GGG - chr8.2:21720830-21720849 None:intergenic 35.0%
! GCCTTGTTCTTAAAGCAAAA+TGG - chr8.2:21718328-21718347 None:intergenic 35.0%
! GTGAGTGAAGATTTTGTTGA+TGG - chr8.2:21721832-21721851 None:intergenic 35.0%
!! AACTTGTTGATTACTACCTC+AGG + chr8.2:21717610-21717629 MS.gene011502:CDS 35.0%
!! GAGTAATTTTTGGGCTTTCA+AGG - chr8.2:21721712-21721731 None:intergenic 35.0%
!! TTGTGATGAAAAGTATTCGG+AGG + chr8.2:21719365-21719384 MS.gene011502:intron 35.0%
ACGAATAGAGCAACAAAAGC+AGG + chr8.2:21718051-21718070 MS.gene011502:CDS 40.0%
AGGAGGGATTTCAAAAATCG+AGG - chr8.2:21720814-21720833 None:intergenic 40.0%
ATAAGTCAGTTATTCCGGGA+CGG - chr8.2:21718557-21718576 None:intergenic 40.0%
ATAGTTAGGAGGGTGAGAAT+TGG - chr8.2:21721597-21721616 None:intergenic 40.0%
ATTGAACCATGGGATCTTCA+AGG + chr8.2:21717693-21717712 MS.gene011502:CDS 40.0%
CAATGCAGCTATTCTTCATG+TGG + chr8.2:21722006-21722025 MS.gene011502:CDS 40.0%
CACATGAAGAATAGCTGCAT+TGG - chr8.2:21722008-21722027 None:intergenic 40.0%
GTGAAAAATCAAAGTAGGCC+GGG + chr8.2:21718736-21718755 MS.gene011502:intron 40.0%
GTTGGAGAAAACTAGCATCA+TGG - chr8.2:21721682-21721701 None:intergenic 40.0%
TATGGTGGTAACAGCAGTAA+TGG + chr8.2:21721854-21721873 MS.gene011502:CDS 40.0%
TATTGCTTTGTCTCTTCCTG+TGG - chr8.2:21718088-21718107 None:intergenic 40.0%
TGATTACTACCTCAGGAAGA+AGG + chr8.2:21717617-21717636 MS.gene011502:CDS 40.0%
! AACTAGCATCATGGTATTGG+TGG - chr8.2:21721673-21721692 None:intergenic 40.0%
! ACATTTTCACATGTACCTCC+AGG + chr8.2:21717561-21717580 MS.gene011502:CDS 40.0%
! ATATAACTCGGGTTCGAGTT+CGG - chr8.2:21720205-21720224 None:intergenic 40.0%
! GCAGAAAGTATACACATGCA+TGG - chr8.2:21721333-21721352 None:intergenic 40.0%
! TAACTTGTACTGCAGGAAGA+AGG + chr8.2:21721440-21721459 MS.gene011502:intron 40.0%
! TACTAGGAGTACAAGGAGTA+CGG + chr8.2:21717798-21717817 MS.gene011502:intron 40.0%
!! ACTAGCATCATGGTATTGGT+GGG - chr8.2:21721672-21721691 None:intergenic 40.0%
!! ATCGGTTTGGCTTGATCTTA+TGG + chr8.2:21720268-21720287 MS.gene011502:intron 40.0%
!! ATTTTTGGGCTTTCAAGGTG+TGG - chr8.2:21721707-21721726 None:intergenic 40.0%
!! CTATTCGTTCTAGTTCCTGT+TGG - chr8.2:21718039-21718058 None:intergenic 40.0%
AAAATCAAAGTAGGCCGGGA+CGG + chr8.2:21718740-21718759 MS.gene011502:intron 45.0%
AAATTCCAACGGTGGTTGAG+AGG - chr8.2:21721049-21721068 None:intergenic 45.0%
AATTCCAACGGTGGTTGAGA+GGG - chr8.2:21721048-21721067 None:intergenic 45.0%
GAGCAACAAAAGCAGGATTC+TGG + chr8.2:21718058-21718077 MS.gene011502:CDS 45.0%
GGATTCAAGATCTGGCATGA+AGG - chr8.2:21721564-21721583 None:intergenic 45.0%
GTTGGATGAAAACGAAAGCC+TGG - chr8.2:21717582-21717601 None:intergenic 45.0%
TAGACGATACCTTCTTCCTG+AGG - chr8.2:21717629-21717648 None:intergenic 45.0%
TAGGAGGGTGAGAATTGGTT+CGG - chr8.2:21721592-21721611 None:intergenic 45.0%
TCGATACCTTGAAGATCCCA+TGG - chr8.2:21717702-21717721 None:intergenic 45.0%
TGGCTTGAAAATTCCAACGG+TGG - chr8.2:21721057-21721076 None:intergenic 45.0%
TGTACTGCAGGAAGAAGGAT+GGG + chr8.2:21721445-21721464 MS.gene011502:intron 45.0%
TTGTACTGCAGGAAGAAGGA+TGG + chr8.2:21721444-21721463 MS.gene011502:intron 45.0%
! CATTACGTTCAGGAGTGTGA+AGG - chr8.2:21721245-21721264 None:intergenic 45.0%
! TATAACTCGGGTTCGAGTTC+GGG - chr8.2:21720204-21720223 None:intergenic 45.0%
!! AAGAAGGATGGGTTGTATGC+AGG + chr8.2:21721456-21721475 MS.gene011502:CDS 45.0%
!! AGAAGGATGGGTTGTATGCA+GGG + chr8.2:21721457-21721476 MS.gene011502:CDS 45.0%
!! AGTCGTGACGGACAACATTT+AGG - chr8.2:21719083-21719102 None:intergenic 45.0%
!! CTAGCATCATGGTATTGGTG+GGG - chr8.2:21721671-21721690 None:intergenic 45.0%
!! CTAGTTCTGGTTTGCATGAG+TGG - chr8.2:21721628-21721647 None:intergenic 45.0%
!!! TGTTAAAAAAAAAATTTTTT+TGG + chr8.2:21719254-21719273 MS.gene011502:intron 5.0%
AAATGTTACTCCCTCCGTCC+CGG + chr8.2:21718540-21718559 MS.gene011502:intron 50.0%
ATCATGGCGTGGAGAAGCAA+TGG - chr8.2:21719672-21719691 None:intergenic 50.0%
ATTCCAACGGTGGTTGAGAG+GGG - chr8.2:21721047-21721066 None:intergenic 50.0%
GGATGAAAACGAAAGCCTGG+AGG - chr8.2:21717579-21717598 None:intergenic 50.0%
GGCTTTCAAGGTGTGGAAGT+TGG - chr8.2:21721700-21721719 None:intergenic 50.0%
TACAAAGGACGTGCCCCAAA+TGG + chr8.2:21718153-21718172 MS.gene011502:CDS 50.0%
TCATGGCGTGGAGAAGCAAT+GGG - chr8.2:21719671-21719690 None:intergenic 50.0%
TTCTACCTCCAGTTGCCACA+TGG + chr8.2:21722096-21722115 MS.gene011502:CDS 50.0%
! AGGAGGGTGAGAATTGGTTC+GGG - chr8.2:21721591-21721610 None:intergenic 50.0%
! ATAACTCGGGTTCGAGTTCG+GGG - chr8.2:21720203-21720222 None:intergenic 50.0%
!! GACGGAGGGAGTACATCTTT+TGG + chr8.2:21718758-21718777 MS.gene011502:intron 50.0%
!! GGTGAGAATTGGTTCGGGTT+GGG - chr8.2:21721586-21721605 None:intergenic 50.0%
!! GTGAGAATTGGTTCGGGTTG+GGG - chr8.2:21721585-21721604 None:intergenic 50.0%
AAGATGTACTCCCTCCGTCC+CGG - chr8.2:21718757-21718776 None:intergenic 55.0%
AGTCAGTTATTCCGGGACGG+AGG - chr8.2:21718554-21718573 None:intergenic 55.0%
CCAGAGTTCCATGTGGCAAC+TGG - chr8.2:21722107-21722126 None:intergenic 55.0%
CCAGTTGCCACATGGAACTC+TGG + chr8.2:21722104-21722123 MS.gene011502:CDS 55.0%
GAGTTCCATGTGGCAACTGG+AGG - chr8.2:21722104-21722123 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr8.2:21718553-21718572 None:intergenic 55.0%
TTTCCCCTCTCAACCACCGT+TGG + chr8.2:21721041-21721060 MS.gene011502:intron 55.0%
! CGGGTTGGGGATTCAAGATC+TGG - chr8.2:21721572-21721591 None:intergenic 55.0%
! GCAGGATTCTGGAAAGCCAC+AGG + chr8.2:21718069-21718088 MS.gene011502:CDS 55.0%
!! GGGTGAGAATTGGTTCGGGT+TGG - chr8.2:21721587-21721606 None:intergenic 55.0%
ATCAAAGTAGGCCGGGACGG+AGG + chr8.2:21718743-21718762 MS.gene011502:intron 60.0%
TCAAAGTAGGCCGGGACGGA+GGG + chr8.2:21718744-21718763 MS.gene011502:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 21717555 21722132 21717555 ID=MS.gene011502
chr8.2 mRNA 21717555 21722132 21717555 ID=MS.gene011502.t1;Parent=MS.gene011502
chr8.2 exon 21717555 21717714 21717555 ID=MS.gene011502.t1.exon1;Parent=MS.gene011502.t1
chr8.2 CDS 21717555 21717714 21717555 ID=cds.MS.gene011502.t1;Parent=MS.gene011502.t1
chr8.2 exon 21717968 21718239 21717968 ID=MS.gene011502.t1.exon2;Parent=MS.gene011502.t1
chr8.2 CDS 21717968 21718239 21717968 ID=cds.MS.gene011502.t1;Parent=MS.gene011502.t1
chr8.2 exon 21721455 21722132 21721455 ID=MS.gene011502.t1.exon3;Parent=MS.gene011502.t1
chr8.2 CDS 21721455 21722132 21721455 ID=cds.MS.gene011502.t1;Parent=MS.gene011502.t1
Gene Sequence

>MS.gene011502

ATGAATACATTTTCACATGTACCTCCAGGCTTTCGTTTTCATCCAACTGATGAAGAACTTGTTGATTACTACCTCAGGAAGAAGGTATCGTCTAAAAAGATTGATCTCGATGTCATCAAAGACGTTGATCTCTATAAAATTGAACCATGGGATCTTCAAGGTATCGATTCGACTTCTATACTGCAAAGCCTTAACAATCAATCCATATTATCTCACAATTTTTTTTATGAAAACAAAAAATTATACTAGGAGTACAAGGAGTACGGTATTAAACGTAACAATAAATTTTTTTTACTCTTAACTTATTAAAATTTGACAATACATTCGTATAATATGAACAAATATATATGTATCATAGAGTATTACTATTTATGATAACACAACATTTGCTATTGGTGATGTATTGCAAACAGAATTATGCAAAATAGGAAGTGATGAACAAAATGACTGGTATTTCTTTAGTCATAAAGATAAGAAGTATCCAACAGGAACTAGAACGAATAGAGCAACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGACAAAGCAATATACTCAAAACAATTTCTGGTTGGGATGAGAAAGACTCTAGTATTTTACAAAGGACGTGCCCCAAATGGACAGAAATCTGATTGGATCATGCATGAGTATCGTCTTGAAACTAATCAAAATGGAATTTCTCAGGTAATTTTCCTTCTTCTTTTTGCTTTTTTATGGATGCATGTTTTTTTATAAGAAAATATTTTATTTATGAACCTCTAGATATGTACCATTTTGCTTTAAGAACAAGGCTTGCGTTGTCACAAGACTAAATCTAAATCATTTAGGCATTCTCATACAAATACAAGAAGGTAGATAAAGTATGATCAATTTTTTCATTTTGTTAAAGTATTTAAACTACACATTTTTTTTATATGTTTGCCTAAACGATTTATATTTGTGTTTGTGATCAACTAAAAGTTATCTTTTTCAAATAATTTAATAAAATGTTACTCCCTCCGTCCCGGAATAACTGACTTATTTTCTAAAAAAAAGTGTCCCAAAATAACTGACTCATTTCAATTTTCAATACAACTTTCATCATTCCCAATACAATATAACACTAAATAATACTACTTTTATCATTCCCAATACAATATATTCCACTTTCCCCTTTATTTATACACTTTTCTTAATCTGTGTGAAAAATCAAAGTAGGCCGGGACGGAGGGAGTACATCTTTTGGTCATTTAGCCCATCTTTAGTACCGATTTTTTCATCTCTTCCCTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATAAAATTTAGGGTTAAATAAGGTTTTGCTCTAAAATTAGTTCATTCATATTTTGTTTTTAATCCCTCTACAAAACCTAAATGTTGTCCGTCACGACTTTTGATTCATATGTTTAAGCAAACTCACGTGTATCCTTTGAAATTTTGCAAACATATTTAGTGGATTATAAAAATCTGTCTAGCAATTTTTTTTAACAAGGAATGTATTTTTAAGTTTTTAGAGCTTAAAATTTATATTTAATTCATATTTTGTTAAAAAAAAAATTTTTTTGGAGATTATCATATAATAAACATCTTTGTAAAAATTTATTCAAAAACGTGAAGGGTGCCCATGAGTTGACTTAAAAACAAGAACAAAAAGTTGTGATGAAAAGTATTCGGAGGATGCAAACTTGCTCAATAATCAATATTATTTATAATGATGAGGTTTTAAGTAGTTTATTATTTTTATTCTTATTCTGTTATTTTACTCGAAGATTTTAATTAATCAATAGTGATCCTTATAACTATCATTTAATAAAATATATATGTTAATTATGTTTTCGGTCTCTATAAATATATCAACGTTCGTTTTAGTCTTACTAAAAATTTCATCAAACTTTTGTCTCCAATTATCAATTTTACTCCACGTACATTTTACTTATTTTGATAAGAAATGGAGATTCCCATTGCTTCTCCACGCCATGATTTTTTTATTTTTACAAAATTACATTGTTGATACCTTGAAATATATTTACTAAATAATTTGATCACTTAACCGCTAATTAATACGTAATTTTTACTAAATTTTTATAACTTCAACTTCTTCAAAAAAAAATCTATAACTTCAGATAAAGGTTAAATCATTTAACTATCCTTATTATCTAAAAGTAGTGATGTTTGTGTCATTACTTAAATTTTAAGTACAGTGTTCCAAACGTATGAAGAATATGTGAGTCTTGATTAGAAAGAAAAAAAAAGAGATTTTTTTAAGTAAAAAAAAAAAACAAGAGATGTCATATGAAGTTGAGCGCTATTCCAATAAAAGATAATTTTAGAGGCCAGAATACAAATTTATGGAAATTATAAGAGAAAAAAATTTCACTTAAATTTTTTGCTTTTACCATATTCAAGTATTTCATTGCATTAGTTTTATGCAGTCGGTTTGTCCGCAAACTCAACTGATAATGTTGAGTTTGTTAAATCAGACATCTGTACCCCGAACTCGAACCCGAGTTATATGTGTGCATTTTTTGTCACTTCGTCTAAAAAAAAATCTTATGTGATCGGTTTGGCTTGATCTTATGGAACAAAGACAAAATCAAAGCCAAAAACAAAAACAGCATTGACAATTTTTTAATTTTTCACAACATATGAAATATAAAAATATTCAAATGATTTGACAGAATTCTCAAGTTAGTCCTTTAAGTTGGATGCAAAAAAAAAAAAGTTAGTCCTTTAAGTTTTAAAAGTTTCAAATATGTCCTTTTAGTTGATAAACTATTTCACCATCACCGTTTCAAAAGTTTAAAATAGGTCCTTTTAGTTTGAAACTTAAAGGACTAACTTGGAAATTTTGTCAAACTAAAATGACCTATTTGAAACTTTTGAAACTTAAAGGATTAACTTGAGAATTTTGTCAACTAAAATGACCTAATTGAAACTTTCGAAACTTAAAGGATTAACTTGAAAATTTTGTCAAACTAAAAGGACCAAAAGTGATATTTGACCTATATTTTTCATTTCTTCCATATTAGGATGATTTTGTTTTACAAGAAAAACAAACTTCAGTTCAAGCTAGTAGACTATCATGTCTTCTTTTTTCTTTCCTCGATTTTTGAAATCCCTCCTCTCCTAAACTCTTAAATATAGTCTAAAAGAAATTAGCTACTAATTTCCAATAGAAAAAGATAGATAAGAATTTTATCATCAATTCAACAATTTGATGCATTTTTGTTGTTGGGAACAAAAAACAATAAGAGGAAATCTTCACACACGCAATAAAATTTATTGTGGTTTAACCCTACATACTTATATCCGCAATCTTTCAACAATATATTTCCCCTCTCAACCACCGTTGGAATTTTCAAGCCAAAATTGCAAATCCTATGAACTACGATTTTAACTCTAAAATTACAAACTTTGTTATGTCACACTACTACTTAATCCATCAATACATATCTCAAAAGGTTATAATCGATGTGGTAAAGAAAACTCAAACTAACCCTTAATATTTATAATAACTCTTCACTTTTTTTTCCTTCACACTCCTGAACGTAATGTCTAATTTGACATAACATATTTTGATTAAAAAAAAATTGAAAATGTCATATTTTGTTAAACTACACCATGCATGTGTATACTTTCTGCTTTTAGGTAGCTAGTTCAAAACTTCAAATATTAATGATGCTATCTATGTGTTCCATTGATATCTATGCGTTCGATTGATAACTATTATAACTTGTACTGCAGGAAGAAGGATGGGTTGTATGCAGGGTATTCAAGAAAAGAATGACAACAGTGCAGAAAATGAATGAATATGATCAATCACCATGTAACTGGTATGATGATCAAGTTTCCTTCATGCCAGATCTTGAATCCCCAACCCGAACCAATTCTCACCCTCCTAACTATACTTCATACCACTCATGCAAACCAGAACTAGAATTAATGCAATATAACACACCCCACCAATACCATGATGCTAGTTTTCTCCAACTTCCACACCTTGAAAGCCCAAAAATTACTCAATCTATTATCCCTTATAATCATCATGCTCATGCAAACAATAACAATATTGCACTTACTCAACATCAGCAACAACAACAGATGCAATATTTTCAGTACCATCAACAAAATCTTCACTCACTTTATGGTGGTAACAGCAGTAATGGCAATGATGAACAAGTTACTGATTGGAGAGTGCTTGACAAGTTTGTTGCTTCTCAGCTAAGTCATGAAGAAAATAATAATAATAATAATAATCAAGATCATGTTTCTAATAAAGAAGCTAGTTCTTTCTCCAATGCAGCTATTCTTCATGTGGCTGAACAGATTACTCTTCTTGCTAATGAATCCAAAAAGAATGATGTTTCTGAGGAACATGCTTCAACTTCTACCTCCAGTTGCCACATGGAACTCTGGAAGTGA
Protein sequence

>MS.gene011502.t1

MNTFSHVPPGFRFHPTDEELVDYYLRKKVSSKKIDLDVIKDVDLYKIEPWDLQELCKIGSDEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKQFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNQNGISQEEGWVVCRVFKKRMTTVQKMNEYDQSPCNWYDDQVSFMPDLESPTRTNSHPPNYTSYHSCKPELELMQYNTPHQYHDASFLQLPHLESPKITQSIIPYNHHAHANNNNIALTQHQQQQQMQYFQYHQQNLHSLYGGNSSNGNDEQVTDWRVLDKFVASQLSHEENNNNNNNQDHVSNKEASSFSNAAILHVAEQITLLANESKKNDVSEEHASTSTSSCHMELWK