Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011554.t1 | XP_003608683.1 | 96.9 | 291 | 9 | 0 | 27 | 317 | 36 | 326 | 8.20E-138 | 500 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011554.t1 | Q7XC57 | 53.6 | 289 | 117 | 7 | 27 | 311 | 37 | 312 | 1.3e-70 | 268.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011554.t1 | D5FFH1 | 96.9 | 291 | 9 | 0 | 27 | 317 | 36 | 326 | 5.9e-138 | 500.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene011554.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011554.t1 | MTR_4g100630 | 98.969 | 291 | 3 | 0 | 27 | 317 | 36 | 326 | 0.0 | 590 |
| MS.gene011554.t1 | MTR_2g100930 | 48.013 | 302 | 137 | 9 | 27 | 314 | 43 | 338 | 1.56e-72 | 228 |
| MS.gene011554.t1 | MTR_6g092540 | 58.095 | 105 | 40 | 1 | 60 | 164 | 75 | 175 | 1.27e-36 | 133 |
| MS.gene011554.t1 | MTR_1g111830 | 52.800 | 125 | 43 | 2 | 40 | 164 | 93 | 201 | 3.89e-35 | 128 |
| MS.gene011554.t1 | MTR_5g037080 | 54.362 | 149 | 47 | 5 | 27 | 174 | 58 | 186 | 1.79e-34 | 128 |
| MS.gene011554.t1 | MTR_8g101650 | 70.886 | 79 | 22 | 1 | 80 | 158 | 99 | 176 | 2.04e-34 | 127 |
| MS.gene011554.t1 | MTR_4g111975 | 58.654 | 104 | 36 | 1 | 80 | 183 | 132 | 228 | 1.17e-33 | 125 |
| MS.gene011554.t1 | MTR_3g462790 | 60.000 | 100 | 38 | 1 | 62 | 159 | 121 | 220 | 2.03e-32 | 122 |
| MS.gene011554.t1 | MTR_5g069710 | 71.233 | 73 | 21 | 0 | 80 | 152 | 126 | 198 | 5.22e-31 | 119 |
| MS.gene011554.t1 | MTR_7g067080 | 66.667 | 81 | 27 | 0 | 78 | 158 | 132 | 212 | 6.25e-31 | 118 |
| MS.gene011554.t1 | MTR_4g107230 | 56.489 | 131 | 47 | 4 | 27 | 153 | 27 | 151 | 1.10e-30 | 117 |
| MS.gene011554.t1 | MTR_3g104370 | 55.556 | 99 | 40 | 2 | 76 | 171 | 81 | 178 | 1.08e-28 | 110 |
| MS.gene011554.t1 | MTR_5g081860 | 64.198 | 81 | 27 | 1 | 81 | 159 | 120 | 200 | 8.30e-28 | 109 |
| MS.gene011554.t1 | MTR_0036s0260 | 67.647 | 68 | 22 | 0 | 86 | 153 | 28 | 95 | 1.34e-27 | 107 |
| MS.gene011554.t1 | MTR_2g090305 | 66.176 | 68 | 23 | 0 | 86 | 153 | 28 | 95 | 9.29e-26 | 101 |
| MS.gene011554.t1 | MTR_8g063600 | 60.256 | 78 | 29 | 1 | 75 | 150 | 95 | 172 | 1.08e-24 | 101 |
| MS.gene011554.t1 | MTR_5g027570 | 36.111 | 144 | 86 | 3 | 38 | 175 | 42 | 185 | 1.24e-22 | 94.7 |
| MS.gene011554.t1 | MTR_5g088010 | 40.678 | 118 | 58 | 4 | 38 | 149 | 15 | 126 | 3.23e-20 | 88.2 |
| MS.gene011554.t1 | MTR_4g015130 | 57.812 | 64 | 27 | 0 | 96 | 159 | 3 | 66 | 1.17e-19 | 82.4 |
| MS.gene011554.t1 | MTR_8g063870 | 47.059 | 85 | 37 | 2 | 83 | 159 | 83 | 167 | 2.25e-18 | 83.6 |
| MS.gene011554.t1 | MTR_1g048660 | 47.059 | 68 | 36 | 0 | 87 | 154 | 13 | 80 | 3.79e-18 | 78.6 |
| MS.gene011554.t1 | MTR_5g027550 | 39.815 | 108 | 61 | 2 | 59 | 162 | 49 | 156 | 4.68e-18 | 82.0 |
| MS.gene011554.t1 | MTR_5g088060 | 41.379 | 116 | 55 | 5 | 38 | 149 | 232 | 338 | 4.83e-18 | 84.7 |
| MS.gene011554.t1 | MTR_5g488160 | 41.379 | 116 | 55 | 5 | 38 | 149 | 232 | 338 | 4.83e-18 | 84.7 |
| MS.gene011554.t1 | MTR_1g033620 | 59.322 | 59 | 24 | 0 | 101 | 159 | 20 | 78 | 1.21e-17 | 81.3 |
| MS.gene011554.t1 | MTR_1g083180 | 36.719 | 128 | 65 | 5 | 34 | 148 | 1 | 125 | 3.44e-15 | 73.2 |
| MS.gene011554.t1 | MTR_5g075760 | 37.500 | 96 | 45 | 3 | 67 | 148 | 75 | 169 | 2.38e-12 | 65.5 |
| MS.gene011554.t1 | MTR_3g070110 | 30.263 | 152 | 82 | 4 | 62 | 192 | 59 | 207 | 3.10e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011554.t1 | AT5G47390 | 59.748 | 318 | 94 | 9 | 27 | 312 | 37 | 352 | 7.53e-107 | 316 |
| MS.gene011554.t1 | AT3G16350 | 43.925 | 321 | 128 | 13 | 27 | 309 | 62 | 368 | 5.37e-50 | 171 |
| MS.gene011554.t1 | AT5G61620 | 52.518 | 139 | 57 | 3 | 27 | 164 | 56 | 186 | 3.25e-35 | 130 |
| MS.gene011554.t1 | AT1G70000 | 53.642 | 151 | 46 | 5 | 27 | 176 | 55 | 182 | 9.25e-34 | 125 |
| MS.gene011554.t1 | AT1G70000 | 53.642 | 151 | 46 | 5 | 27 | 176 | 55 | 182 | 9.25e-34 | 125 |
| MS.gene011554.t1 | AT2G38090 | 66.667 | 84 | 28 | 0 | 75 | 158 | 130 | 213 | 2.23e-33 | 125 |
| MS.gene011554.t1 | AT5G08520 | 52.336 | 107 | 51 | 0 | 53 | 159 | 85 | 191 | 5.71e-33 | 124 |
| MS.gene011554.t1 | AT1G49010 | 68.293 | 82 | 24 | 1 | 80 | 159 | 128 | 209 | 1.08e-32 | 123 |
| MS.gene011554.t1 | AT5G04760 | 62.195 | 82 | 31 | 0 | 74 | 155 | 87 | 168 | 1.06e-31 | 118 |
| MS.gene011554.t1 | AT5G58900 | 72.857 | 70 | 19 | 0 | 81 | 150 | 136 | 205 | 4.85e-31 | 118 |
| MS.gene011554.t1 | AT5G56840 | 67.123 | 73 | 23 | 1 | 81 | 152 | 86 | 158 | 6.37e-31 | 116 |
| MS.gene011554.t1 | AT3G11280 | 44.118 | 136 | 73 | 1 | 18 | 150 | 56 | 191 | 1.97e-29 | 113 |
| MS.gene011554.t1 | AT3G11280 | 44.118 | 136 | 73 | 1 | 18 | 150 | 56 | 191 | 1.97e-29 | 113 |
| MS.gene011554.t1 | AT1G19000 | 55.000 | 120 | 44 | 1 | 63 | 182 | 79 | 188 | 2.93e-28 | 110 |
| MS.gene011554.t1 | AT1G19000 | 55.000 | 120 | 44 | 1 | 63 | 182 | 79 | 188 | 2.93e-28 | 110 |
| MS.gene011554.t1 | AT5G01200 | 63.636 | 77 | 28 | 0 | 80 | 156 | 140 | 216 | 3.53e-28 | 110 |
| MS.gene011554.t1 | AT1G74840 | 52.239 | 134 | 49 | 4 | 27 | 153 | 38 | 163 | 3.57e-27 | 107 |
| MS.gene011554.t1 | AT1G74840 | 52.239 | 134 | 49 | 4 | 27 | 153 | 38 | 163 | 5.41e-27 | 107 |
| MS.gene011554.t1 | AT5G05790 | 63.636 | 77 | 28 | 0 | 74 | 150 | 119 | 195 | 1.19e-26 | 106 |
| MS.gene011554.t1 | AT5G05790 | 63.636 | 77 | 28 | 0 | 74 | 150 | 119 | 195 | 1.19e-26 | 106 |
| MS.gene011554.t1 | AT3G10580 | 48.039 | 102 | 51 | 1 | 59 | 160 | 68 | 167 | 7.92e-24 | 98.6 |
| MS.gene011554.t1 | AT3G10580 | 48.039 | 102 | 51 | 1 | 59 | 160 | 68 | 167 | 1.42e-23 | 98.2 |
| MS.gene011554.t1 | AT4G09450 | 48.515 | 101 | 46 | 2 | 66 | 160 | 68 | 168 | 5.44e-22 | 92.0 |
| MS.gene011554.t1 | AT5G23650 | 35.484 | 155 | 80 | 3 | 14 | 150 | 32 | 184 | 5.00e-21 | 92.0 |
| MS.gene011554.t1 | AT3G10590 | 48.276 | 87 | 41 | 3 | 70 | 153 | 92 | 177 | 3.36e-18 | 82.0 |
Find 102 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCATGTGTTTCTTTCTT+AGG | 0.230059 | 8.1:+22571251 | None:intergenic |
| TTACCCATGCTAGCACTTTC+CGG | 0.272862 | 8.1:+22573857 | None:intergenic |
| ATCGACATTGATTGGGCTCT+TGG | 0.306199 | 8.1:+22571205 | None:intergenic |
| CATTGATGTCGGGCTTTAAT+GGG | 0.332518 | 8.1:+22571372 | None:intergenic |
| GCATTGATGTCGGGCTTTAA+TGG | 0.338606 | 8.1:+22571371 | None:intergenic |
| AACAGCTTCACACCACGATT+TGG | 0.346847 | 8.1:+22573904 | None:intergenic |
| ATTGGGCTCTTGGAATGTAC+TGG | 0.350663 | 8.1:+22571215 | None:intergenic |
| ACGAGTTCATCGACATTGAT+TGG | 0.357821 | 8.1:+22571197 | None:intergenic |
| CACTATAGCGGGTCCGGGTC+TGG | 0.363851 | 8.1:-22573827 | MS.gene011554:CDS |
| GGTGAAACTATTGGTGATAC+TGG | 0.369014 | 8.1:-22571152 | MS.gene011554:CDS |
| TTTCCTCTTCCATATTGGTC+TGG | 0.369873 | 8.1:-22571293 | MS.gene011554:CDS |
| TGTGTTTCTTTCTTAGGAGC+TGG | 0.373891 | 8.1:+22571257 | None:intergenic |
| CCTTGATATAACATAGTTCC+TGG | 0.379937 | 8.1:+22572359 | None:intergenic |
| CTTAGCCACTATAGCGGGTC+CGG | 0.398806 | 8.1:-22573833 | MS.gene011554:CDS |
| GATCATGGTGCTGATGGTTA+TGG | 0.418054 | 8.1:-22573755 | MS.gene011554:CDS |
| TAACCATCAGCACCATGATC+AGG | 0.421312 | 8.1:+22573758 | None:intergenic |
| CTCTTGGAATGTACTGGGGT+TGG | 0.426876 | 8.1:+22571221 | None:intergenic |
| TTCATACAACTCCAGCTTGT+GGG | 0.433206 | 8.1:-22571073 | MS.gene011554:CDS |
| TTGGGCTCTTGGAATGTACT+GGG | 0.435041 | 8.1:+22571216 | None:intergenic |
| GGAAGAGGAAAAGGGAAGAA+TGG | 0.436557 | 8.1:+22571305 | None:intergenic |
| GACCAATATGGAAGAGGAAA+AGG | 0.441108 | 8.1:+22571296 | None:intergenic |
| TGCGGTACCATTGAAGTATC+AGG | 0.442348 | 8.1:+22571527 | None:intergenic |
| CTGAGTTTAGGTGAAACTAT+TGG | 0.449826 | 8.1:-22571161 | MS.gene011554:CDS |
| GCAGGCACCTGATACTTCAA+TGG | 0.455907 | 8.1:-22571534 | MS.gene011554:intron |
| GACGCTTGTGCATTGATGTC+GGG | 0.457053 | 8.1:+22571362 | None:intergenic |
| GGACTGTATCCAGACCAATA+TGG | 0.463662 | 8.1:+22571284 | None:intergenic |
| AATCGTGGTGTGAAGCTGTT+TGG | 0.464828 | 8.1:-22573901 | MS.gene011554:CDS |
| CGAGTTCATCGACATTGATT+GGG | 0.465415 | 8.1:+22571198 | None:intergenic |
| CATCTGCAACAATATCAAAC+AGG | 0.473584 | 8.1:+22572256 | None:intergenic |
| TGCACAAGCGTCGGCTTACC+CGG | 0.477679 | 8.1:-22571351 | MS.gene011554:CDS |
| TGAAAAGCCGACTGTCTAGA+AGG | 0.477844 | 8.1:+22571092 | None:intergenic |
| ACAAGCTGGGCAAAGGTGAT+TGG | 0.481462 | 8.1:-22572392 | MS.gene011554:CDS |
| GTTCTCATTGCAGCCACAAT+GGG | 0.482827 | 8.1:-22573945 | None:intergenic |
| TCATCGAGTGGAGGAGGAGC+AGG | 0.484781 | 8.1:+22571449 | None:intergenic |
| CTATGTTCCTCCTCAGTCCA+TGG | 0.485937 | 8.1:+22572435 | None:intergenic |
| GGCATGTCAAAACTGAGTTT+AGG | 0.490022 | 8.1:-22571173 | MS.gene011554:CDS |
| TAAGATTAACCGATGGGATC+CGG | 0.490318 | 8.1:-22573876 | MS.gene011554:CDS |
| TCTTTCTTAGGAGCTGGCTC+AGG | 0.491218 | 8.1:+22571263 | None:intergenic |
| AAGAATGGAGAATAATATGC+TGG | 0.499540 | 8.1:+22571320 | None:intergenic |
| GTTTGAGTTTGTAGAATCCA+TGG | 0.503591 | 8.1:+22571415 | None:intergenic |
| CGACGCTTGTGCATTGATGT+CGG | 0.504753 | 8.1:+22571361 | None:intergenic |
| GTGATTGGCGTGGAATTGCC+AGG | 0.506530 | 8.1:-22572377 | MS.gene011554:CDS |
| CAGACCCGGACCCGCTATAG+TGG | 0.508114 | 8.1:+22573828 | None:intergenic |
| CACAGAACAGTCCCACAAGC+TGG | 0.510753 | 8.1:+22571062 | None:intergenic |
| TTACTTGGATTGAACAAGCT+GGG | 0.512315 | 8.1:-22572405 | MS.gene011554:CDS |
| CATTCTTCATCGAGTGGAGG+AGG | 0.516097 | 8.1:+22571443 | None:intergenic |
| ACCAATATGGAAGAGGAAAA+GGG | 0.517539 | 8.1:+22571297 | None:intergenic |
| CCAGGAACTATGTTATATCA+AGG | 0.521846 | 8.1:-22572359 | MS.gene011554:CDS |
| AGTGGAGGAGGAGCAGGCAA+AGG | 0.525729 | 8.1:+22571455 | None:intergenic |
| TTTACTTGGATTGAACAAGC+TGG | 0.526943 | 8.1:-22572406 | MS.gene011554:CDS |
| TCAAATACTCCTGGTTCACC+TGG | 0.529002 | 8.1:-22573788 | MS.gene011554:CDS |
| GGATCCGGAAAGTGCTAGCA+TGG | 0.530927 | 8.1:-22573861 | MS.gene011554:CDS |
| TAAGAAAGAAACACATGAAG+TGG | 0.531198 | 8.1:-22571249 | MS.gene011554:CDS |
| TAATATGCTGGATATACTAC+CGG | 0.533057 | 8.1:+22571332 | None:intergenic |
| CGATGAAGAATGTGAGTCCA+TGG | 0.537872 | 8.1:-22571432 | MS.gene011554:CDS |
| GTGGAGGAGGAGCAGGCAAA+GGG | 0.545011 | 8.1:+22571456 | None:intergenic |
| AACCCTGATCATGGTGCTGA+TGG | 0.553194 | 8.1:-22573761 | MS.gene011554:CDS |
| GTCGGGCTTTAATGGGGCAG+AGG | 0.557337 | 8.1:+22571379 | None:intergenic |
| TGCAACAATATCAAACAGGC+TGG | 0.557484 | 8.1:+22572260 | None:intergenic |
| TGTTCTCATTGCAGCCACAA+TGG | 0.558526 | 8.1:-22573946 | None:intergenic |
| GGTAATCTTAGCCACTATAG+CGG | 0.560908 | 8.1:-22573839 | MS.gene011554:CDS |
| TCTCGTAAACTACTTGAAGA+AGG | 0.563354 | 8.1:-22571116 | MS.gene011554:CDS |
| GATTCTACAAACTCAAACGA+TGG | 0.564664 | 8.1:-22571410 | MS.gene011554:CDS |
| TATCCAGACCAATATGGAAG+AGG | 0.565662 | 8.1:+22571290 | None:intergenic |
| TTAGCCACTATAGCGGGTCC+GGG | 0.567360 | 8.1:-22573832 | MS.gene011554:CDS |
| TTTCATACAACTCCAGCTTG+TGG | 0.570031 | 8.1:-22571074 | MS.gene011554:CDS |
| AGTTTACGAGACAGAGTCGA+GGG | 0.572728 | 8.1:+22571128 | None:intergenic |
| TCAGGCAAAGCAATGTGTCT+AGG | 0.575738 | 8.1:-22572296 | MS.gene011554:CDS |
| AATACCGGGTCAAATACTCC+TGG | 0.575888 | 8.1:-22573797 | MS.gene011554:CDS |
| TTGGAGTAAGATTAACCGAT+GGG | 0.581339 | 8.1:-22573882 | MS.gene011554:CDS |
| TGCTGATGGTTATGGTTCTG+AGG | 0.588306 | 8.1:-22573747 | MS.gene011554:CDS |
| GGATTGAACAAGCTGGGCAA+AGG | 0.588333 | 8.1:-22572399 | MS.gene011554:CDS |
| AACCATCAGCACCATGATCA+GGG | 0.589650 | 8.1:+22573759 | None:intergenic |
| CCTGGTGAAAACCCTGATCA+TGG | 0.590290 | 8.1:-22573770 | MS.gene011554:CDS |
| GTAATCTTAGCCACTATAGC+GGG | 0.591144 | 8.1:-22573838 | MS.gene011554:CDS |
| CGGGAAGTAGAAGAAGAACC+AGG | 0.591204 | 8.1:+22573716 | None:intergenic |
| ATCAATGTCGATGAACTCGT+TGG | 0.598709 | 8.1:-22571194 | MS.gene011554:CDS |
| GACTCACATTCTTCATCGAG+TGG | 0.599669 | 8.1:+22571437 | None:intergenic |
| AGAAGGTCCTTCTAGACAGT+CGG | 0.599702 | 8.1:-22571099 | MS.gene011554:CDS |
| CAACTACAAACTGAAACAGA+AGG | 0.603118 | 8.1:-22571485 | MS.gene011554:CDS |
| ATTGATGTCGGGCTTTAATG+GGG | 0.617600 | 8.1:+22571373 | None:intergenic |
| TTCTTGAGTTGTGCCCATTG+TGG | 0.619382 | 8.1:+22573932 | None:intergenic |
| ATCAAGGACACCTACTCAAG+TGG | 0.620432 | 8.1:-22572343 | MS.gene011554:CDS |
| CGACATCAATGCACAAGCGT+CGG | 0.624911 | 8.1:-22571360 | MS.gene011554:CDS |
| TAGCACTTTCCGGATCCCAT+CGG | 0.625401 | 8.1:+22573867 | None:intergenic |
| CTGGGCAAAGGTGATTGGCG+TGG | 0.626265 | 8.1:-22572387 | MS.gene011554:CDS |
| TTTGGAGTAAGATTAACCGA+TGG | 0.628079 | 8.1:-22573883 | MS.gene011554:CDS |
| ATGTGTCTAGGCGGAAGAGA+CGG | 0.634804 | 8.1:-22572284 | MS.gene011554:CDS |
| AATATGCTGGATATACTACC+GGG | 0.636844 | 8.1:+22571333 | None:intergenic |
| TGGGCTCTTGGAATGTACTG+GGG | 0.642523 | 8.1:+22571217 | None:intergenic |
| GCGTGACTGGCCACTTGAGT+AGG | 0.645270 | 8.1:+22572333 | None:intergenic |
| TTAGCTGACAAGAAGTCTTG+CGG | 0.653600 | 8.1:+22571509 | None:intergenic |
| TGCAGGCACTCCATGGACTG+AGG | 0.655185 | 8.1:-22572445 | MS.gene011554:intron |
| GGTATTCAAAAGTCCAGACC+CGG | 0.655952 | 8.1:+22573814 | None:intergenic |
| GATCCGGAAAGTGCTAGCAT+GGG | 0.659510 | 8.1:-22573860 | MS.gene011554:CDS |
| TCAAGAACTTGTCCAAATCG+TGG | 0.664250 | 8.1:-22573916 | MS.gene011554:CDS |
| TAGTTTACGAGACAGAGTCG+AGG | 0.668337 | 8.1:+22571127 | None:intergenic |
| TCACATTCTTCATCGAGTGG+AGG | 0.671641 | 8.1:+22571440 | None:intergenic |
| AGGCACTCCATGGACTGAGG+AGG | 0.685831 | 8.1:-22572442 | MS.gene011554:CDS |
| GGCAAAGCAATGTGTCTAGG+CGG | 0.687559 | 8.1:-22572293 | MS.gene011554:CDS |
| TGAACCAGGAGTATTTGACC+CGG | 0.708436 | 8.1:+22573793 | None:intergenic |
| GTTTACGAGACAGAGTCGAG+GGG | 0.738520 | 8.1:+22571129 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAAAAGTATTAAAAAAAA+CGG | + | chr8.1:22573209-22573228 | None:intergenic | 10.0% |
| !!! | ATTTTTAATATTTTATTTGC+AGG | - | chr8.1:22572531-22572550 | MS.gene011554:intron | 10.0% |
| !! | ATTAAAGAAAAAAACACATT+TGG | + | chr8.1:22572879-22572898 | None:intergenic | 15.0% |
| !! | ATTATTATGTTTGTTTAACT+TGG | - | chr8.1:22571685-22571704 | MS.gene011554:intron | 15.0% |
| !!! | AAATATCATTTAAAGCAAAA+AGG | + | chr8.1:22572292-22572311 | None:intergenic | 15.0% |
| !!! | TTATATTTTTGATTTTTGGT+TGG | - | chr8.1:22571479-22571498 | MS.gene011554:CDS | 15.0% |
| !! | ATATAGAATTTGGAAATAAG+GGG | + | chr8.1:22572771-22572790 | None:intergenic | 20.0% |
| !! | ATTTGGATAATCTTATCAAA+TGG | + | chr8.1:22572862-22572881 | None:intergenic | 20.0% |
| !! | CATATAGAATTTGGAAATAA+GGG | + | chr8.1:22572772-22572791 | None:intergenic | 20.0% |
| !! | GTGAAATATATGCATATTAA+TGG | + | chr8.1:22571752-22571771 | None:intergenic | 20.0% |
| !! | TAAAACATTGGTATTTAGTT+TGG | - | chr8.1:22573310-22573329 | MS.gene011554:intron | 20.0% |
| !! | TTATATGCAACATAATGTAA+AGG | + | chr8.1:22572809-22572828 | None:intergenic | 20.0% |
| !! | TTTGAATTCAATTATATAGC+TGG | - | chr8.1:22573148-22573167 | MS.gene011554:intron | 20.0% |
| !!! | ATATGCTCTTTTTAACTATA+TGG | - | chr8.1:22571930-22571949 | MS.gene011554:intron | 20.0% |
| !!! | ATCTGAAATATATTGAATGT+TGG | - | chr8.1:22571594-22571613 | MS.gene011554:intron | 20.0% |
| !!! | CATTTTAAGCATATAGAATT+TGG | + | chr8.1:22572781-22572800 | None:intergenic | 20.0% |
| !!! | TAATGTTAGGTATACTTTTT+TGG | - | chr8.1:22572367-22572386 | MS.gene011554:CDS | 20.0% |
| !!! | TATTTTTGTTTTGATTTTGC+AGG | - | chr8.1:22573441-22573460 | MS.gene011554:intron | 20.0% |
| !!! | TTTGCTTTAAATGATATTTG+TGG | - | chr8.1:22572293-22572312 | MS.gene011554:CDS | 20.0% |
| ! | AAAATTATGTGATCTTGGTT+TGG | - | chr8.1:22571422-22571441 | MS.gene011554:CDS | 25.0% |
| ! | AACATTATTAATACACAGAG+AGG | + | chr8.1:22573019-22573038 | None:intergenic | 25.0% |
| ! | ATCAAATTAGTGAGAAATAC+GGG | + | chr8.1:22573275-22573294 | None:intergenic | 25.0% |
| ! | ATTTCTCACTAATTTGATGT+CGG | - | chr8.1:22573277-22573296 | MS.gene011554:intron | 25.0% |
| ! | CATCAAATTAGTGAGAAATA+CGG | + | chr8.1:22573276-22573295 | None:intergenic | 25.0% |
| ! | CTAGATGAATTCAAGTATAT+TGG | - | chr8.1:22571397-22571416 | MS.gene011554:CDS | 25.0% |
| ! | GCATATAGAATTTGGAAATA+AGG | + | chr8.1:22572773-22572792 | None:intergenic | 25.0% |
| ! | GTCTATGATAGATTAAATAC+CGG | - | chr8.1:22571838-22571857 | MS.gene011554:intron | 25.0% |
| ! | TCTATGATAGATTAAATACC+GGG | - | chr8.1:22571839-22571858 | MS.gene011554:intron | 25.0% |
| ! | TCTGTGTATTAATAATGTTC+TGG | - | chr8.1:22573020-22573039 | MS.gene011554:intron | 25.0% |
| ! | TGGATAAAATTATGTGATCT+TGG | - | chr8.1:22571417-22571436 | MS.gene011554:CDS | 25.0% |
| ! | TTCAAATAGTCACTAATGTT+AGG | - | chr8.1:22572354-22572373 | MS.gene011554:CDS | 25.0% |
| !! | ATGATATTGTTTGACCTTTT+AGG | - | chr8.1:22572897-22572916 | MS.gene011554:intron | 25.0% |
| !! | ATTTTCAAAGAATCCCTAAA+AGG | + | chr8.1:22572914-22572933 | None:intergenic | 25.0% |
| !! | TGATATTGTTTGACCTTTTA+GGG | - | chr8.1:22572898-22572917 | MS.gene011554:intron | 25.0% |
| !! | TTAAATGAGTCAAAGGTTTT+AGG | + | chr8.1:22572396-22572415 | None:intergenic | 25.0% |
| !! | TTCTGAACCTTCTAATTTTT+CGG | - | chr8.1:22573409-22573428 | MS.gene011554:intron | 25.0% |
| !!! | CTCTTTTTAACTATATGGTT+CGG | - | chr8.1:22571935-22571954 | MS.gene011554:intron | 25.0% |
| !!! | GAACATAGAATGTTTTTACT+TGG | - | chr8.1:22572573-22572592 | MS.gene011554:intron | 25.0% |
| !!! | GTCTTTTTTGAGAGAATTAT+TGG | - | chr8.1:22571563-22571582 | MS.gene011554:intron | 25.0% |
| AACCTAGTTAAATGAGTCAA+AGG | + | chr8.1:22572403-22572422 | None:intergenic | 30.0% | |
| AACCTTTGACTCATTTAACT+AGG | - | chr8.1:22572398-22572417 | MS.gene011554:CDS | 30.0% | |
| AAGAATGGAGAATAATATGC+TGG | + | chr8.1:22573676-22573695 | None:intergenic | 30.0% | |
| AATTCAATTATATAGCTGGC+TGG | - | chr8.1:22573152-22573171 | MS.gene011554:intron | 30.0% | |
| AATTGAATTCAAACCAACCA+GGG | + | chr8.1:22573141-22573160 | None:intergenic | 30.0% | |
| ACGCTCAAAAATATTTCATC+AGG | - | chr8.1:22572679-22572698 | MS.gene011554:intron | 30.0% | |
| ACTTCATGTGTTTCTTTCTT+AGG | + | chr8.1:22573745-22573764 | None:intergenic | 30.0% | |
| AGAAATCCCGAAAAATTAGA+AGG | + | chr8.1:22573419-22573438 | None:intergenic | 30.0% | |
| ATCATGACTGAAACAATCTT+TGG | - | chr8.1:22572009-22572028 | MS.gene011554:intron | 30.0% | |
| GAAAAATTAGAAGGTTCAGA+AGG | + | chr8.1:22573410-22573429 | None:intergenic | 30.0% | |
| GTATTCTAGTGCCTAATTAT+GGG | - | chr8.1:22571717-22571736 | MS.gene011554:intron | 30.0% | |
| GTTAGATATTGATAGAACCA+TGG | - | chr8.1:22573042-22573061 | MS.gene011554:intron | 30.0% | |
| TAAGAAAGAAACACATGAAG+TGG | - | chr8.1:22573744-22573763 | MS.gene011554:CDS | 30.0% | |
| TAATATGCTGGATATACTAC+CGG | + | chr8.1:22573664-22573683 | None:intergenic | 30.0% | |
| TAATTGAATTCAAACCAACC+AGG | + | chr8.1:22573142-22573161 | None:intergenic | 30.0% | |
| TATTCTAGTGCCTAATTATG+GGG | - | chr8.1:22571718-22571737 | MS.gene011554:intron | 30.0% | |
| TGACTCATTTAACTAGGTTT+CGG | - | chr8.1:22572404-22572423 | MS.gene011554:CDS | 30.0% | |
| TGTATTCTAGTGCCTAATTA+TGG | - | chr8.1:22571716-22571735 | MS.gene011554:intron | 30.0% | |
| TTTCTCACTAATTTGATGTC+GGG | - | chr8.1:22573278-22573297 | MS.gene011554:intron | 30.0% | |
| TTTGCTTGCATGTGAATTAT+TGG | - | chr8.1:22571347-22571366 | MS.gene011554:CDS | 30.0% | |
| ! | AAACATTGCATTTTCTGATG+TGG | - | chr8.1:22573338-22573357 | MS.gene011554:intron | 30.0% |
| ! | AAATGGACAATTTTCCCAAA+TGG | + | chr8.1:22572972-22572991 | None:intergenic | 30.0% |
| ! | CTTATCAAATGGTAATGAAC+AGG | + | chr8.1:22572851-22572870 | None:intergenic | 30.0% |
| ! | GTCTATCTAAAGTTTGATCT+AGG | + | chr8.1:22572270-22572289 | None:intergenic | 30.0% |
| ! | TCTGAACCTTCTAATTTTTC+GGG | - | chr8.1:22573410-22573429 | MS.gene011554:intron | 30.0% |
| ! | TTGAATGTTGGTCTAAGAAA+TGG | - | chr8.1:22571606-22571625 | MS.gene011554:intron | 30.0% |
| !! | AACATTGGTATTTAGTTTGG+AGG | - | chr8.1:22573313-22573332 | MS.gene011554:intron | 30.0% |
| !!! | AACAACCCTTTTTTCTTTCA+CGG | + | chr8.1:22571300-22571319 | None:intergenic | 30.0% |
| !!! | AACATTGTTTTTGAACCACA+TGG | + | chr8.1:22571650-22571669 | None:intergenic | 30.0% |
| !!! | GGGACTGATTTTTAAAACAT+TGG | - | chr8.1:22573298-22573317 | MS.gene011554:intron | 30.0% |
| !!! | TGTTAGGTATACTTTTTTGG+AGG | - | chr8.1:22572370-22572389 | MS.gene011554:CDS | 30.0% |
| !!! | TTTGGCAATGTTTTAATAGC+CGG | - | chr8.1:22573075-22573094 | MS.gene011554:intron | 30.0% |
| !!! | TTTTTGGTTGGTGTAATTGT+AGG | - | chr8.1:22571491-22571510 | MS.gene011554:CDS | 30.0% |
| AAGAAATGTGACCCTATTCA+GGG | + | chr8.1:22572158-22572177 | None:intergenic | 35.0% | |
| AATATGCTGGATATACTACC+GGG | + | chr8.1:22573663-22573682 | None:intergenic | 35.0% | |
| AATGGATAGGTATAAGTCTC+AGG | - | chr8.1:22571624-22571643 | MS.gene011554:intron | 35.0% | |
| AATTCACATGCAAGCAAAAG+AGG | + | chr8.1:22571345-22571364 | None:intergenic | 35.0% | |
| ACATTACAGTCAGCTTCAAT+GGG | - | chr8.1:22572468-22572487 | MS.gene011554:intron | 35.0% | |
| ACATTTCTTAAACGACGACA+TGG | - | chr8.1:22572169-22572188 | MS.gene011554:intron | 35.0% | |
| ACCAATATGGAAGAGGAAAA+GGG | + | chr8.1:22573699-22573718 | None:intergenic | 35.0% | |
| ACCTGGACAAAAATAAAGCT+TGG | + | chr8.1:22572035-22572054 | None:intergenic | 35.0% | |
| ACTTCCCGTGAAAGAAAAAA+GGG | - | chr8.1:22571292-22571311 | MS.gene011554:CDS | 35.0% | |
| ATTACACACAACCCTGAATA+GGG | - | chr8.1:22572144-22572163 | MS.gene011554:intron | 35.0% | |
| ATTCTAGTGCCTAATTATGG+GGG | - | chr8.1:22571719-22571738 | MS.gene011554:intron | 35.0% | |
| CAAATTCAGCTAAACAGTAC+TGG | + | chr8.1:22572431-22572450 | None:intergenic | 35.0% | |
| CAACTACAAACTGAAACAGA+AGG | - | chr8.1:22573508-22573527 | MS.gene011554:intron | 35.0% | |
| CATCAACATCCAAAATATCC+AGG | + | chr8.1:22572995-22573014 | None:intergenic | 35.0% | |
| CATCCAAAATATCCAGGAAA+TGG | + | chr8.1:22572989-22573008 | None:intergenic | 35.0% | |
| CATCTGCAACAATATCAAAC+AGG | + | chr8.1:22572740-22572759 | None:intergenic | 35.0% | |
| CCAGGAACTATGTTATATCA+AGG | - | chr8.1:22572634-22572653 | MS.gene011554:intron | 35.0% | |
| CCTTGATATAACATAGTTCC+TGG | + | chr8.1:22572637-22572656 | None:intergenic | 35.0% | |
| CTGAGTTTAGGTGAAACTAT+TGG | - | chr8.1:22573832-22573851 | MS.gene011554:CDS | 35.0% | |
| CTGTTTCAGCTATCTAAACT+AGG | - | chr8.1:22571771-22571790 | MS.gene011554:intron | 35.0% | |
| GATTCTACAAACTCAAACGA+TGG | - | chr8.1:22573583-22573602 | MS.gene011554:intron | 35.0% | |
| GGTTCAAGACACAGAAAAAA+TGG | - | chr8.1:22572088-22572107 | MS.gene011554:intron | 35.0% | |
| TAAGAAATGTGACCCTATTC+AGG | + | chr8.1:22572159-22572178 | None:intergenic | 35.0% | |
| TACTTCCCGTGAAAGAAAAA+AGG | - | chr8.1:22571291-22571310 | MS.gene011554:CDS | 35.0% | |
| TAGGAGTAACTAGACAAGAA+AGG | - | chr8.1:22571510-22571529 | MS.gene011554:CDS | 35.0% | |
| TCTCGTAAACTACTTGAAGA+AGG | - | chr8.1:22573877-22573896 | MS.gene011554:CDS | 35.0% | |
| TTACTTGGATTGAACAAGCT+GGG | - | chr8.1:22572588-22572607 | MS.gene011554:intron | 35.0% | |
| TTAGAAGGTTCAGAAGGAAA+AGG | + | chr8.1:22573404-22573423 | None:intergenic | 35.0% | |
| TTGGAGTAAGATTAACCGAT+GGG | - | chr8.1:22571111-22571130 | MS.gene011554:CDS | 35.0% | |
| TTTACTTGGATTGAACAAGC+TGG | - | chr8.1:22572587-22572606 | MS.gene011554:intron | 35.0% | |
| ! | ATGGTAATGAACAGGTTATG+TGG | + | chr8.1:22572843-22572862 | None:intergenic | 35.0% |
| ! | GTTTGAGTTTGTAGAATCCA+TGG | + | chr8.1:22573581-22573600 | None:intergenic | 35.0% |
| ! | TGCACAGAGTATCAGATTTA+GGG | + | chr8.1:22572210-22572229 | None:intergenic | 35.0% |
| ! | TGTCCATTTCCTGGATATTT+TGG | - | chr8.1:22572983-22573002 | MS.gene011554:intron | 35.0% |
| ! | TGTTGGTCTAAGAAATGGAT+AGG | - | chr8.1:22571611-22571630 | MS.gene011554:intron | 35.0% |
| ! | TTGCACAGAGTATCAGATTT+AGG | + | chr8.1:22572211-22572230 | None:intergenic | 35.0% |
| ! | TTTGGAGTAAGATTAACCGA+TGG | - | chr8.1:22571110-22571129 | MS.gene011554:CDS | 35.0% |
| ! | TTTTCTGTGTCTTGAACCTT+CGG | + | chr8.1:22572086-22572105 | None:intergenic | 35.0% |
| !! | GAAATATTTTTGAGCGTGAC+TGG | + | chr8.1:22572676-22572695 | None:intergenic | 35.0% |
| !! | TATGTGATCTTGGTTTGGAT+TGG | - | chr8.1:22571427-22571446 | MS.gene011554:CDS | 35.0% |
| !!! | ACAACCCTTTTTTCTTTCAC+GGG | + | chr8.1:22571299-22571318 | None:intergenic | 35.0% |
| ACGAGTTCATCGACATTGAT+TGG | + | chr8.1:22573799-22573818 | None:intergenic | 40.0% | |
| ATAGATTAAATACCGGGCTG+TGG | - | chr8.1:22571845-22571864 | MS.gene011554:intron | 40.0% | |
| ATCAATGTCGATGAACTCGT+TGG | - | chr8.1:22573799-22573818 | MS.gene011554:CDS | 40.0% | |
| ATTGATAGAACCATGGCTCT+GGG | - | chr8.1:22573049-22573068 | MS.gene011554:intron | 40.0% | |
| CAATGCTTGCAGATCATTAG+GGG | + | chr8.1:22571905-22571924 | None:intergenic | 40.0% | |
| CACATTACAGTCAGCTTCAA+TGG | - | chr8.1:22572467-22572486 | MS.gene011554:intron | 40.0% | |
| CATTACAGTCAGCTTCAATG+GGG | - | chr8.1:22572469-22572488 | MS.gene011554:intron | 40.0% | |
| CCAATGCTTGCAGATCATTA+GGG | + | chr8.1:22571906-22571925 | None:intergenic | 40.0% | |
| GACCAATATGGAAGAGGAAA+AGG | + | chr8.1:22573700-22573719 | None:intergenic | 40.0% | |
| GATTACACACAACCCTGAAT+AGG | - | chr8.1:22572143-22572162 | MS.gene011554:intron | 40.0% | |
| GGCATGTCAAAACTGAGTTT+AGG | - | chr8.1:22573820-22573839 | MS.gene011554:CDS | 40.0% | |
| GGTAATCTTAGCCACTATAG+CGG | - | chr8.1:22571154-22571173 | MS.gene011554:CDS | 40.0% | |
| GTAATCTTAGCCACTATAGC+GGG | - | chr8.1:22571155-22571174 | MS.gene011554:CDS | 40.0% | |
| TAAGATTAACCGATGGGATC+CGG | - | chr8.1:22571117-22571136 | MS.gene011554:CDS | 40.0% | |
| TATCCAGACCAATATGGAAG+AGG | + | chr8.1:22573706-22573725 | None:intergenic | 40.0% | |
| TATTGATAGAACCATGGCTC+TGG | - | chr8.1:22573048-22573067 | MS.gene011554:intron | 40.0% | |
| TCAAGAACTTGTCCAAATCG+TGG | - | chr8.1:22571077-22571096 | MS.gene011554:CDS | 40.0% | |
| TGCAACAATATCAAACAGGC+TGG | + | chr8.1:22572736-22572755 | None:intergenic | 40.0% | |
| TGGGAAAATTGTCCATTTCC+TGG | - | chr8.1:22572974-22572993 | MS.gene011554:intron | 40.0% | |
| TGTGTTTCTTTCTTAGGAGC+TGG | + | chr8.1:22573739-22573758 | None:intergenic | 40.0% | |
| TTAGCTGACAAGAAGTCTTG+CGG | + | chr8.1:22573487-22573506 | None:intergenic | 40.0% | |
| TTAGTGAGAAATACGGGTCA+TGG | + | chr8.1:22573269-22573288 | None:intergenic | 40.0% | |
| TTCAGTCATGATTCGAACTC+TGG | + | chr8.1:22572001-22572020 | None:intergenic | 40.0% | |
| TTCATACAACTCCAGCTTGT+GGG | - | chr8.1:22573920-22573939 | MS.gene011554:CDS | 40.0% | |
| TTTCATACAACTCCAGCTTG+TGG | - | chr8.1:22573919-22573938 | MS.gene011554:CDS | 40.0% | |
| TTTCCTCTTCCATATTGGTC+TGG | - | chr8.1:22573700-22573719 | MS.gene011554:intron | 40.0% | |
| TTTCTGTGTCTTGAACCTTC+GGG | + | chr8.1:22572085-22572104 | None:intergenic | 40.0% | |
| ! | ATTGATGTCGGGCTTTAATG+GGG | + | chr8.1:22573623-22573642 | None:intergenic | 40.0% |
| ! | CACGACACTGTTTTCCATTT+GGG | - | chr8.1:22572955-22572974 | MS.gene011554:intron | 40.0% |
| ! | CATTGATGTCGGGCTTTAAT+GGG | + | chr8.1:22573624-22573643 | None:intergenic | 40.0% |
| ! | CGAGTTCATCGACATTGATT+GGG | + | chr8.1:22573798-22573817 | None:intergenic | 40.0% |
| ! | GCACAGAGTATCAGATTTAG+GGG | + | chr8.1:22572209-22572228 | None:intergenic | 40.0% |
| ! | GGTGAAACTATTGGTGATAC+TGG | - | chr8.1:22573841-22573860 | MS.gene011554:CDS | 40.0% |
| ! | TCACGACACTGTTTTCCATT+TGG | - | chr8.1:22572954-22572973 | MS.gene011554:intron | 40.0% |
| ! | TCCCTTTTCCTCTTCCATAT+TGG | - | chr8.1:22573695-22573714 | MS.gene011554:intron | 40.0% |
| !! | TTTTATTTGCAGGCACTCCA+TGG | - | chr8.1:22572541-22572560 | MS.gene011554:intron | 40.0% |
| !!! | GCCAAGCTTTATTTTTGTCC+AGG | - | chr8.1:22572031-22572050 | MS.gene011554:intron | 40.0% |
| AAAAACGGTTGAACCAGCCA+TGG | + | chr8.1:22573194-22573213 | None:intergenic | 45.0% | |
| AAACCAACCAGGGAACTAGT+TGG | + | chr8.1:22573131-22573150 | None:intergenic | 45.0% | |
| AACAGCTTCACACCACGATT+TGG | + | chr8.1:22571092-22571111 | None:intergenic | 45.0% | |
| AACCATCAGCACCATGATCA+GGG | + | chr8.1:22571237-22571256 | None:intergenic | 45.0% | |
| AATACCGGGTCAAATACTCC+TGG | - | chr8.1:22571196-22571215 | MS.gene011554:CDS | 45.0% | |
| AATCGTGGTGTGAAGCTGTT+TGG | - | chr8.1:22571092-22571111 | MS.gene011554:CDS | 45.0% | |
| AGAAGGTCCTTCTAGACAGT+CGG | - | chr8.1:22573894-22573913 | MS.gene011554:CDS | 45.0% | |
| AGTTTACGAGACAGAGTCGA+GGG | + | chr8.1:22573868-22573887 | None:intergenic | 45.0% | |
| ATCAAGGACACCTACTCAAG+TGG | - | chr8.1:22572650-22572669 | MS.gene011554:intron | 45.0% | |
| ATCCTTCCCAAGAGTGAGTA+GGG | - | chr8.1:22572244-22572263 | MS.gene011554:intron | 45.0% | |
| ATTGGGCTCTTGGAATGTAC+TGG | + | chr8.1:22573781-22573800 | None:intergenic | 45.0% | |
| CAGAAGGAAAAGGAAAAGCG+AGG | + | chr8.1:22573394-22573413 | None:intergenic | 45.0% | |
| CCCTAATGATCTGCAAGCAT+TGG | - | chr8.1:22571903-22571922 | MS.gene011554:intron | 45.0% | |
| CGATGAAGAATGTGAGTCCA+TGG | - | chr8.1:22573561-22573580 | MS.gene011554:intron | 45.0% | |
| GACTCACATTCTTCATCGAG+TGG | + | chr8.1:22573559-22573578 | None:intergenic | 45.0% | |
| GCCAATGCTTGCAGATCATT+AGG | + | chr8.1:22571907-22571926 | None:intergenic | 45.0% | |
| GGAAGAGGAAAAGGGAAGAA+TGG | + | chr8.1:22573691-22573710 | None:intergenic | 45.0% | |
| GGACTGTATCCAGACCAATA+TGG | + | chr8.1:22573712-22573731 | None:intergenic | 45.0% | |
| GGTATTCAAAAGTCCAGACC+CGG | + | chr8.1:22571182-22571201 | None:intergenic | 45.0% | |
| GTCAGCTTCAATGGGGATTA+CGG | - | chr8.1:22572476-22572495 | MS.gene011554:intron | 45.0% | |
| TAACCATCAGCACCATGATC+AGG | + | chr8.1:22571238-22571257 | None:intergenic | 45.0% | |
| TACTCACTCTTGGGAAGGAT+GGG | + | chr8.1:22572244-22572263 | None:intergenic | 45.0% | |
| TAGTTTACGAGACAGAGTCG+AGG | + | chr8.1:22573869-22573888 | None:intergenic | 45.0% | |
| TCAAATACTCCTGGTTCACC+TGG | - | chr8.1:22571205-22571224 | MS.gene011554:CDS | 45.0% | |
| TCACATTCTTCATCGAGTGG+AGG | + | chr8.1:22573556-22573575 | None:intergenic | 45.0% | |
| TCAGGCAAAGCAATGTGTCT+AGG | - | chr8.1:22572697-22572716 | MS.gene011554:intron | 45.0% | |
| TGAAAAGCCGACTGTCTAGA+AGG | + | chr8.1:22573904-22573923 | None:intergenic | 45.0% | |
| TGTCTTGAACCTTCGGGAAA+GGG | + | chr8.1:22572079-22572098 | None:intergenic | 45.0% | |
| TTACCCATGCTAGCACTTTC+CGG | + | chr8.1:22571139-22571158 | None:intergenic | 45.0% | |
| TTGGGCTCTTGGAATGTACT+GGG | + | chr8.1:22573780-22573799 | None:intergenic | 45.0% | |
| ! | ACTATATGGTTCGGCTCAAG+TGG | - | chr8.1:22571944-22571963 | MS.gene011554:intron | 45.0% |
| ! | ATCGACATTGATTGGGCTCT+TGG | + | chr8.1:22573791-22573810 | None:intergenic | 45.0% |
| ! | CAGAGTATCAGATTTAGGGG+AGG | + | chr8.1:22572206-22572225 | None:intergenic | 45.0% |
| ! | GCATTGATGTCGGGCTTTAA+TGG | + | chr8.1:22573625-22573644 | None:intergenic | 45.0% |
| ! | GGGTCTGGACTTTTGAATAC+CGG | - | chr8.1:22571181-22571200 | MS.gene011554:CDS | 45.0% |
| ! | GGTCTGGACTTTTGAATACC+GGG | - | chr8.1:22571182-22571201 | MS.gene011554:CDS | 45.0% |
| ! | TGCGGTACCATTGAAGTATC+AGG | + | chr8.1:22573469-22573488 | None:intergenic | 45.0% |
| ! | TGCTGATGGTTATGGTTCTG+AGG | - | chr8.1:22571246-22571265 | MS.gene011554:CDS | 45.0% |
| ! | TTCTTGAGTTGTGCCCATTG+TGG | + | chr8.1:22571064-22571083 | None:intergenic | 45.0% |
| ! | TTGATAGAACCATGGCTCTG+GGG | - | chr8.1:22573050-22573069 | MS.gene011554:intron | 45.0% |
| ! | TTTTTGTCCAGGTCGAACTC+TGG | - | chr8.1:22572042-22572061 | MS.gene011554:intron | 45.0% |
| !! | GATCATGGTGCTGATGGTTA+TGG | - | chr8.1:22571238-22571257 | MS.gene011554:CDS | 45.0% |
| !! | TGAACCAGGAGTATTTGACC+CGG | + | chr8.1:22571203-22571222 | None:intergenic | 45.0% |
| !!! | GGTTCTGAGGATTTTGTTCC+TGG | - | chr8.1:22571259-22571278 | MS.gene011554:CDS | 45.0% |
| !!! | AATATTATATTTTTGATTTT+TGG | - | chr8.1:22571475-22571494 | MS.gene011554:CDS | 5.0% |
| AACCAGCCATGGTTGAACTG+CGG | + | chr8.1:22573183-22573202 | None:intergenic | 50.0% | |
| ACAAGCTGGGCAAAGGTGAT+TGG | - | chr8.1:22572601-22572620 | MS.gene011554:intron | 50.0% | |
| ATCTAGGCCCTACTCACTCT+TGG | + | chr8.1:22572254-22572273 | None:intergenic | 50.0% | |
| ATGTGTCTAGGCGGAAGAGA+CGG | - | chr8.1:22572709-22572728 | MS.gene011554:intron | 50.0% | |
| ATTAAATACCGGGCTGTGGC+AGG | - | chr8.1:22571849-22571868 | MS.gene011554:intron | 50.0% | |
| CAGGTCGAACTCTGGATTAC+CGG | - | chr8.1:22572050-22572069 | MS.gene011554:intron | 50.0% | |
| CATCCTTCCCAAGAGTGAGT+AGG | - | chr8.1:22572243-22572262 | MS.gene011554:intron | 50.0% | |
| CATTCTTCATCGAGTGGAGG+AGG | + | chr8.1:22573553-22573572 | None:intergenic | 50.0% | |
| CCTGGTGAAAACCCTGATCA+TGG | - | chr8.1:22571223-22571242 | MS.gene011554:CDS | 50.0% | |
| CGACATCAATGCACAAGCGT+CGG | - | chr8.1:22573633-22573652 | MS.gene011554:intron | 50.0% | |
| CGGGAAGTAGAAGAAGAACC+AGG | + | chr8.1:22571280-22571299 | None:intergenic | 50.0% | |
| CTACTCACTCTTGGGAAGGA+TGG | + | chr8.1:22572245-22572264 | None:intergenic | 50.0% | |
| CTATGTTCCTCCTCAGTCCA+TGG | + | chr8.1:22572561-22572580 | None:intergenic | 50.0% | |
| CTCTTGGAATGTACTGGGGT+TGG | + | chr8.1:22573775-22573794 | None:intergenic | 50.0% | |
| GAACCAACTAGTTCCCTGGT+TGG | - | chr8.1:22573125-22573144 | MS.gene011554:intron | 50.0% | |
| GCAGGCACCTGATACTTCAA+TGG | - | chr8.1:22573459-22573478 | MS.gene011554:intron | 50.0% | |
| GGACCTCATCCCCCATAATT+AGG | + | chr8.1:22571731-22571750 | None:intergenic | 50.0% | |
| GGATTGAACAAGCTGGGCAA+AGG | - | chr8.1:22572594-22572613 | MS.gene011554:intron | 50.0% | |
| GGCAAAGCAATGTGTCTAGG+CGG | - | chr8.1:22572700-22572719 | MS.gene011554:intron | 50.0% | |
| GGGGTGAAACAAGCTAGACA+AGG | + | chr8.1:22571886-22571905 | None:intergenic | 50.0% | |
| GGTATAAGTCTCAGGCCATG+TGG | - | chr8.1:22571632-22571651 | MS.gene011554:intron | 50.0% | |
| GTGCCTAATTATGGGGGATG+AGG | - | chr8.1:22571725-22571744 | MS.gene011554:intron | 50.0% | |
| GTGTCTTGAACCTTCGGGAA+AGG | + | chr8.1:22572080-22572099 | None:intergenic | 50.0% | |
| GTTGAACCGCAGTTCAACCA+TGG | - | chr8.1:22573174-22573193 | MS.gene011554:intron | 50.0% | |
| GTTTACGAGACAGAGTCGAG+GGG | + | chr8.1:22573867-22573886 | None:intergenic | 50.0% | |
| TAGCACTTTCCGGATCCCAT+CGG | + | chr8.1:22571129-22571148 | None:intergenic | 50.0% | |
| TCTAGGCCCTACTCACTCTT+GGG | + | chr8.1:22572253-22572272 | None:intergenic | 50.0% | |
| TGGGCTCTTGGAATGTACTG+GGG | + | chr8.1:22573779-22573798 | None:intergenic | 50.0% | |
| ! | AACCCTGATCATGGTGCTGA+TGG | - | chr8.1:22571232-22571251 | MS.gene011554:CDS | 50.0% |
| ! | CCATGATCAGGGTTTTCACC+AGG | + | chr8.1:22571226-22571245 | None:intergenic | 50.0% |
| ! | CGACGCTTGTGCATTGATGT+CGG | + | chr8.1:22573635-22573654 | None:intergenic | 50.0% |
| ! | GACGCTTGTGCATTGATGTC+GGG | + | chr8.1:22573634-22573653 | None:intergenic | 50.0% |
| ! | GGAACTAGTTGGTTCCCTCT+CGG | + | chr8.1:22573120-22573139 | None:intergenic | 50.0% |
| ! | TCTTTCTTAGGAGCTGGCTC+AGG | + | chr8.1:22573733-22573752 | None:intergenic | 50.0% |
| !! | AACCATGGCTCTGGGGTATT+TGG | - | chr8.1:22573057-22573076 | MS.gene011554:intron | 50.0% |
| !! | GATCCGGAAAGTGCTAGCAT+GGG | - | chr8.1:22571133-22571152 | MS.gene011554:CDS | 50.0% |
| AACCGCAGTTCAACCATGGC+TGG | - | chr8.1:22573178-22573197 | MS.gene011554:intron | 55.0% | |
| AATAGCCGGACCGAACCAAC+CGG | - | chr8.1:22573089-22573108 | MS.gene011554:intron | 55.0% | |
| CACAGAACAGTCCCACAAGC+TGG | + | chr8.1:22573934-22573953 | None:intergenic | 55.0% | |
| CACTCTTGGGAAGGATGGGA+AGG | + | chr8.1:22572240-22572259 | None:intergenic | 55.0% | |
| CGGTAATCCAGAGTTCGACC+TGG | + | chr8.1:22572052-22572071 | None:intergenic | 55.0% | |
| GAGGGAACCAACTAGTTCCC+TGG | - | chr8.1:22573121-22573140 | MS.gene011554:intron | 55.0% | |
| GTCGAACTCTGGATTACCGG+AGG | - | chr8.1:22572053-22572072 | MS.gene011554:intron | 55.0% | |
| GTGATTGGCGTGGAATTGCC+AGG | - | chr8.1:22572616-22572635 | MS.gene011554:intron | 55.0% | |
| TGCCAAATACCCCAGAGCCA+TGG | + | chr8.1:22573062-22573081 | None:intergenic | 55.0% | |
| ! | GGGTTTTCACCAGGTGAACC+AGG | + | chr8.1:22571217-22571236 | None:intergenic | 55.0% |
| !! | CTTAGCCACTATAGCGGGTC+CGG | - | chr8.1:22571160-22571179 | MS.gene011554:CDS | 55.0% |
| !! | GGATCCGGAAAGTGCTAGCA+TGG | - | chr8.1:22571132-22571151 | MS.gene011554:CDS | 55.0% |
| !! | TTAGCCACTATAGCGGGTCC+GGG | - | chr8.1:22571161-22571180 | MS.gene011554:CDS | 55.0% |
| AACCAACCGGTTGTGCCGAG+AGG | - | chr8.1:22573102-22573121 | MS.gene011554:intron | 60.0% | |
| AACCTTCGGGAAAGGGCCTC+CGG | + | chr8.1:22572072-22572091 | None:intergenic | 60.0% | |
| ACCAACCGGTTGTGCCGAGA+GGG | - | chr8.1:22573103-22573122 | MS.gene011554:intron | 60.0% | |
| AGTGGAGGAGGAGCAGGCAA+AGG | + | chr8.1:22573541-22573560 | None:intergenic | 60.0% | |
| CTGGGCAAAGGTGATTGGCG+TGG | - | chr8.1:22572606-22572625 | MS.gene011554:intron | 60.0% | |
| GGCCCTACTCACTCTTGGGA+AGG | + | chr8.1:22572249-22572268 | None:intergenic | 60.0% | |
| GTCAAACACCTGCCACAGCC+CGG | + | chr8.1:22571860-22571879 | None:intergenic | 60.0% | |
| GTGGAGGAGGAGCAGGCAAA+GGG | + | chr8.1:22573540-22573559 | None:intergenic | 60.0% | |
| TCATCGAGTGGAGGAGGAGC+AGG | + | chr8.1:22573547-22573566 | None:intergenic | 60.0% | |
| TGGTTCCCTCTCGGCACAAC+CGG | + | chr8.1:22573111-22573130 | None:intergenic | 60.0% | |
| ! | AGGCACTCCATGGACTGAGG+AGG | - | chr8.1:22572551-22572570 | MS.gene011554:intron | 60.0% |
| ! | CTCGGCACAACCGGTTGGTT+CGG | + | chr8.1:22573102-22573121 | None:intergenic | 60.0% |
| ! | GCGTGACTGGCCACTTGAGT+AGG | + | chr8.1:22572663-22572682 | None:intergenic | 60.0% |
| ! | GTCGGGCTTTAATGGGGCAG+AGG | + | chr8.1:22573617-22573636 | None:intergenic | 60.0% |
| ! | TGCAGGCACTCCATGGACTG+AGG | - | chr8.1:22572548-22572567 | MS.gene011554:intron | 60.0% |
| !! | CACAACCGGTTGGTTCGGTC+CGG | + | chr8.1:22573097-22573116 | None:intergenic | 60.0% |
| !! | TGCACAAGCGTCGGCTTACC+CGG | - | chr8.1:22573642-22573661 | MS.gene011554:intron | 60.0% |
| CAGACCCGGACCCGCTATAG+TGG | + | chr8.1:22571168-22571187 | None:intergenic | 65.0% | |
| TACCGGAGGCCCTTTCCCGA+AGG | - | chr8.1:22572067-22572086 | MS.gene011554:intron | 65.0% | |
| TCCCTCTCGGCACAACCGGT+TGG | + | chr8.1:22573107-22573126 | None:intergenic | 65.0% | |
| !! | CACTATAGCGGGTCCGGGTC+TGG | - | chr8.1:22571166-22571185 | MS.gene011554:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 22571061 | 22573954 | 22571061 | ID=MS.gene011554 |
| chr8.1 | mRNA | 22571061 | 22573954 | 22571061 | ID=MS.gene011554.t1;Parent=MS.gene011554 |
| chr8.1 | exon | 22573702 | 22573954 | 22573702 | ID=MS.gene011554.t1.exon1;Parent=MS.gene011554.t1 |
| chr8.1 | CDS | 22573702 | 22573954 | 22573702 | ID=cds.MS.gene011554.t1;Parent=MS.gene011554.t1 |
| chr8.1 | exon | 22572254 | 22572462 | 22572254 | ID=MS.gene011554.t1.exon2;Parent=MS.gene011554.t1 |
| chr8.1 | CDS | 22572254 | 22572462 | 22572254 | ID=cds.MS.gene011554.t1;Parent=MS.gene011554.t1 |
| chr8.1 | exon | 22571061 | 22571552 | 22571061 | ID=MS.gene011554.t1.exon3;Parent=MS.gene011554.t1 |
| chr8.1 | CDS | 22571061 | 22571552 | 22571061 | ID=cds.MS.gene011554.t1;Parent=MS.gene011554.t1 |
| Gene Sequence |
| Protein sequence |
