Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011555.t1 | XP_003608683.1 | 97.5 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 5.80E-155 | 557 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011555.t1 | Q7XC57 | 58.5 | 325 | 117 | 8 | 1 | 320 | 1 | 312 | 2.9e-86 | 320.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011555.t1 | D5FFH1 | 97.5 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 4.2e-155 | 557.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene011555.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011555.t1 | MTR_4g100630 | 99.387 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 0.0 | 669 |
| MS.gene011555.t1 | MTR_2g100930 | 51.744 | 344 | 139 | 11 | 1 | 323 | 1 | 338 | 3.20e-97 | 291 |
| MS.gene011555.t1 | MTR_5g037080 | 48.768 | 203 | 65 | 5 | 1 | 183 | 3 | 186 | 2.54e-48 | 164 |
| MS.gene011555.t1 | MTR_6g092540 | 47.568 | 185 | 75 | 4 | 1 | 173 | 1 | 175 | 1.01e-45 | 157 |
| MS.gene011555.t1 | MTR_8g101650 | 48.889 | 180 | 70 | 6 | 3 | 167 | 4 | 176 | 3.85e-42 | 147 |
| MS.gene011555.t1 | MTR_4g107230 | 54.902 | 153 | 58 | 5 | 15 | 162 | 5 | 151 | 3.03e-36 | 132 |
| MS.gene011555.t1 | MTR_1g111830 | 52.800 | 125 | 43 | 2 | 49 | 173 | 93 | 201 | 2.76e-35 | 128 |
| MS.gene011555.t1 | MTR_3g104370 | 41.622 | 185 | 94 | 4 | 1 | 180 | 3 | 178 | 3.80e-34 | 125 |
| MS.gene011555.t1 | MTR_4g111975 | 58.654 | 104 | 36 | 1 | 89 | 192 | 132 | 228 | 2.16e-33 | 125 |
| MS.gene011555.t1 | MTR_3g462790 | 60.000 | 100 | 38 | 1 | 71 | 168 | 121 | 220 | 3.77e-32 | 122 |
| MS.gene011555.t1 | MTR_5g069710 | 73.239 | 71 | 19 | 0 | 89 | 159 | 126 | 196 | 5.40e-31 | 119 |
| MS.gene011555.t1 | MTR_7g067080 | 66.667 | 81 | 27 | 0 | 87 | 167 | 132 | 212 | 6.15e-31 | 119 |
| MS.gene011555.t1 | MTR_5g081860 | 64.198 | 81 | 27 | 1 | 90 | 168 | 120 | 200 | 9.66e-28 | 109 |
| MS.gene011555.t1 | MTR_0036s0260 | 67.647 | 68 | 22 | 0 | 95 | 162 | 28 | 95 | 1.60e-27 | 107 |
| MS.gene011555.t1 | MTR_2g090305 | 66.176 | 68 | 23 | 0 | 95 | 162 | 28 | 95 | 1.59e-25 | 101 |
| MS.gene011555.t1 | MTR_8g063600 | 60.256 | 78 | 29 | 1 | 84 | 159 | 95 | 172 | 6.19e-25 | 102 |
| MS.gene011555.t1 | MTR_5g027570 | 36.111 | 144 | 86 | 3 | 47 | 184 | 42 | 185 | 7.84e-23 | 95.1 |
| MS.gene011555.t1 | MTR_5g088010 | 40.678 | 118 | 58 | 4 | 47 | 158 | 15 | 126 | 3.15e-20 | 88.6 |
| MS.gene011555.t1 | MTR_4g015130 | 57.812 | 64 | 27 | 0 | 105 | 168 | 3 | 66 | 1.32e-19 | 82.4 |
| MS.gene011555.t1 | MTR_8g063870 | 47.059 | 85 | 37 | 2 | 92 | 168 | 83 | 167 | 2.43e-18 | 84.0 |
| MS.gene011555.t1 | MTR_5g088060 | 41.379 | 116 | 55 | 5 | 47 | 158 | 232 | 338 | 3.56e-18 | 85.1 |
| MS.gene011555.t1 | MTR_5g488160 | 41.379 | 116 | 55 | 5 | 47 | 158 | 232 | 338 | 3.56e-18 | 85.1 |
| MS.gene011555.t1 | MTR_1g048660 | 47.059 | 68 | 36 | 0 | 96 | 163 | 13 | 80 | 3.92e-18 | 78.6 |
| MS.gene011555.t1 | MTR_5g027550 | 47.368 | 76 | 39 | 1 | 68 | 142 | 49 | 124 | 4.32e-18 | 82.0 |
| MS.gene011555.t1 | MTR_1g033620 | 59.322 | 59 | 24 | 0 | 110 | 168 | 20 | 78 | 1.59e-17 | 80.9 |
| MS.gene011555.t1 | MTR_1g083180 | 36.719 | 128 | 65 | 5 | 43 | 157 | 1 | 125 | 3.56e-15 | 73.2 |
| MS.gene011555.t1 | MTR_5g075760 | 39.583 | 96 | 43 | 4 | 76 | 157 | 75 | 169 | 2.99e-12 | 65.5 |
| MS.gene011555.t1 | MTR_3g070110 | 35.088 | 114 | 62 | 3 | 97 | 201 | 97 | 207 | 2.87e-11 | 62.8 |
| MS.gene011555.t1 | MTR_8g072990 | 28.244 | 131 | 89 | 2 | 92 | 220 | 97 | 224 | 6.42e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011555.t1 | AT5G47390 | 63.277 | 354 | 95 | 10 | 1 | 321 | 1 | 352 | 1.52e-135 | 389 |
| MS.gene011555.t1 | AT3G16350 | 45.288 | 382 | 131 | 15 | 1 | 318 | 1 | 368 | 4.59e-71 | 226 |
| MS.gene011555.t1 | AT5G61620 | 50.267 | 187 | 71 | 5 | 1 | 173 | 8 | 186 | 1.47e-49 | 168 |
| MS.gene011555.t1 | AT1G70000 | 50.244 | 205 | 59 | 7 | 1 | 185 | 1 | 182 | 2.32e-48 | 163 |
| MS.gene011555.t1 | AT1G70000 | 50.244 | 205 | 59 | 7 | 1 | 185 | 1 | 182 | 2.32e-48 | 163 |
| MS.gene011555.t1 | AT5G56840 | 44.751 | 181 | 57 | 6 | 1 | 161 | 1 | 158 | 2.75e-39 | 139 |
| MS.gene011555.t1 | AT2G38090 | 71.795 | 78 | 22 | 0 | 90 | 167 | 136 | 213 | 2.45e-33 | 125 |
| MS.gene011555.t1 | AT1G74840 | 52.667 | 150 | 55 | 5 | 21 | 162 | 22 | 163 | 4.61e-33 | 122 |
| MS.gene011555.t1 | AT1G19000 | 45.128 | 195 | 89 | 4 | 5 | 191 | 4 | 188 | 5.81e-33 | 123 |
| MS.gene011555.t1 | AT1G19000 | 45.128 | 195 | 89 | 4 | 5 | 191 | 4 | 188 | 5.81e-33 | 123 |
| MS.gene011555.t1 | AT1G74840 | 52.667 | 150 | 55 | 5 | 21 | 162 | 22 | 163 | 7.58e-33 | 122 |
| MS.gene011555.t1 | AT5G08520 | 52.336 | 107 | 51 | 0 | 62 | 168 | 85 | 191 | 8.55e-33 | 123 |
| MS.gene011555.t1 | AT1G49010 | 68.293 | 82 | 24 | 1 | 89 | 168 | 128 | 209 | 1.12e-32 | 123 |
| MS.gene011555.t1 | AT5G04760 | 62.195 | 82 | 31 | 0 | 83 | 164 | 87 | 168 | 1.20e-31 | 118 |
| MS.gene011555.t1 | AT5G58900 | 72.857 | 70 | 19 | 0 | 90 | 159 | 136 | 205 | 5.22e-31 | 118 |
| MS.gene011555.t1 | AT3G11280 | 55.000 | 100 | 45 | 0 | 60 | 159 | 92 | 191 | 8.34e-29 | 112 |
| MS.gene011555.t1 | AT3G11280 | 55.000 | 100 | 45 | 0 | 60 | 159 | 92 | 191 | 8.34e-29 | 112 |
| MS.gene011555.t1 | AT5G01200 | 63.636 | 77 | 28 | 0 | 89 | 165 | 140 | 216 | 3.31e-28 | 110 |
| MS.gene011555.t1 | AT5G05790 | 63.636 | 77 | 28 | 0 | 83 | 159 | 119 | 195 | 1.23e-26 | 106 |
| MS.gene011555.t1 | AT5G05790 | 63.636 | 77 | 28 | 0 | 83 | 159 | 119 | 195 | 1.23e-26 | 106 |
| MS.gene011555.t1 | AT3G10580 | 48.039 | 102 | 51 | 1 | 68 | 169 | 68 | 167 | 7.97e-24 | 98.6 |
| MS.gene011555.t1 | AT3G10580 | 48.039 | 102 | 51 | 1 | 68 | 169 | 68 | 167 | 1.27e-23 | 98.6 |
| MS.gene011555.t1 | AT4G09450 | 48.515 | 101 | 46 | 2 | 75 | 169 | 68 | 168 | 6.03e-22 | 92.0 |
| MS.gene011555.t1 | AT5G23650 | 51.948 | 77 | 37 | 0 | 83 | 159 | 108 | 184 | 1.51e-20 | 90.9 |
| MS.gene011555.t1 | AT3G10590 | 48.276 | 87 | 41 | 3 | 79 | 162 | 92 | 177 | 3.49e-18 | 82.0 |
Find 102 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCATGTGTTTCTTTCTT+AGG | 0.230059 | 8.4:+23245634 | None:intergenic |
| ATCGACATTGATTGGGCTCT+TGG | 0.306199 | 8.4:+23245588 | None:intergenic |
| CATTGATGTCGGGCTTTAAT+GGG | 0.332518 | 8.4:+23245755 | None:intergenic |
| GCATTGATGTCGGGCTTTAA+TGG | 0.338606 | 8.4:+23245754 | None:intergenic |
| AACAGCTTCACACCACGATT+TGG | 0.346847 | 8.4:+23248289 | None:intergenic |
| ATTGGGCTCTTGGAATGTAC+TGG | 0.350663 | 8.4:+23245598 | None:intergenic |
| ACGAGTTCATCGACATTGAT+TGG | 0.357821 | 8.4:+23245580 | None:intergenic |
| CACTATAGCGGGTCCGGGTC+TGG | 0.363851 | 8.4:-23248211 | MS.gene011555:CDS |
| GGTGAAACTATTGGTGATAC+TGG | 0.369014 | 8.4:-23245535 | MS.gene011555:CDS |
| TTTCCTCTTCCATATTGGTC+TGG | 0.369873 | 8.4:-23245676 | MS.gene011555:CDS |
| TGTGTTTCTTTCTTAGGAGC+TGG | 0.373891 | 8.4:+23245640 | None:intergenic |
| CCTTGATATAACATAGTTCC+TGG | 0.379937 | 8.4:+23246743 | None:intergenic |
| CTTAGCCACTATAGCGGGTC+CGG | 0.398806 | 8.4:-23248217 | MS.gene011555:CDS |
| GATCATGGTGCTGATGGTTA+TGG | 0.418054 | 8.4:-23248139 | MS.gene011555:CDS |
| TAACCATCAGCACCATGATC+AGG | 0.421312 | 8.4:+23248142 | None:intergenic |
| CTCTTGGAATGTACTGGGGT+TGG | 0.426876 | 8.4:+23245604 | None:intergenic |
| TTCATACAACTCCAGCTTGT+GGG | 0.433206 | 8.4:-23245456 | MS.gene011555:CDS |
| TTGGGCTCTTGGAATGTACT+GGG | 0.435041 | 8.4:+23245599 | None:intergenic |
| GGAAGAGGAAAAGGGAAGAA+TGG | 0.436557 | 8.4:+23245688 | None:intergenic |
| GACCAATATGGAAGAGGAAA+AGG | 0.441108 | 8.4:+23245679 | None:intergenic |
| TGCGGTACCATTGAAGTATC+AGG | 0.442348 | 8.4:+23245910 | None:intergenic |
| CTGAGTTTAGGTGAAACTAT+TGG | 0.449826 | 8.4:-23245544 | MS.gene011555:CDS |
| GCAGGCACCTGATACTTCAA+TGG | 0.455907 | 8.4:-23245917 | MS.gene011555:intron |
| GACGCTTGTGCATTGATGTC+GGG | 0.457053 | 8.4:+23245745 | None:intergenic |
| GGACTGTATCCAGACCAATA+TGG | 0.463662 | 8.4:+23245667 | None:intergenic |
| AATCGTGGTGTGAAGCTGTT+TGG | 0.464828 | 8.4:-23248286 | MS.gene011555:CDS |
| CGAGTTCATCGACATTGATT+GGG | 0.465415 | 8.4:+23245581 | None:intergenic |
| CATCTGCAACAATATCAAAC+AGG | 0.473584 | 8.4:+23246640 | None:intergenic |
| TGCACAAGCGTCGGCTTACC+CGG | 0.477679 | 8.4:-23245734 | MS.gene011555:CDS |
| TGAAAAGCCGACTGTCTAGA+AGG | 0.477844 | 8.4:+23245475 | None:intergenic |
| ACAAGCTGGGCAAAGGTGAT+TGG | 0.481462 | 8.4:-23246776 | MS.gene011555:CDS |
| GTTCTCATTGCAGCCACAAT+GGG | 0.482827 | 8.4:-23248330 | MS.gene011555:CDS |
| TCATCGAGTGGAGGAGGAGC+AGG | 0.484781 | 8.4:+23245832 | None:intergenic |
| CTATGTTCCTCCTCAGTCCA+TGG | 0.485937 | 8.4:+23246819 | None:intergenic |
| GGCATGTCAAAACTGAGTTT+AGG | 0.490022 | 8.4:-23245556 | MS.gene011555:CDS |
| TAAGATTAACCGATGGGATC+CGG | 0.490318 | 8.4:-23248261 | MS.gene011555:CDS |
| TCTTTCTTAGGAGCTGGCTC+AGG | 0.491218 | 8.4:+23245646 | None:intergenic |
| AAGAATGGAGAATAATATGC+TGG | 0.499540 | 8.4:+23245703 | None:intergenic |
| GTTTGAGTTTGTAGAATCCA+TGG | 0.503591 | 8.4:+23245798 | None:intergenic |
| CGACGCTTGTGCATTGATGT+CGG | 0.504753 | 8.4:+23245744 | None:intergenic |
| GTGATTGGCGTGGAATTGCC+AGG | 0.506530 | 8.4:-23246761 | MS.gene011555:CDS |
| CAGACCCGGACCCGCTATAG+TGG | 0.508114 | 8.4:+23248212 | None:intergenic |
| CACAGAACAGTCCCACAAGC+TGG | 0.510753 | 8.4:+23245445 | None:intergenic |
| TTACTTGGATTGAACAAGCT+GGG | 0.512315 | 8.4:-23246789 | MS.gene011555:CDS |
| CATTCTTCATCGAGTGGAGG+AGG | 0.516097 | 8.4:+23245826 | None:intergenic |
| ACCAATATGGAAGAGGAAAA+GGG | 0.517539 | 8.4:+23245680 | None:intergenic |
| CCAGGAACTATGTTATATCA+AGG | 0.521846 | 8.4:-23246743 | MS.gene011555:CDS |
| AGTGGAGGAGGAGCAGGCAA+AGG | 0.525729 | 8.4:+23245838 | None:intergenic |
| TTTACTTGGATTGAACAAGC+TGG | 0.526943 | 8.4:-23246790 | MS.gene011555:CDS |
| TCAAATACTCCTGGTTCACC+TGG | 0.529002 | 8.4:-23248172 | MS.gene011555:CDS |
| TAAGAAAGAAACACATGAAG+TGG | 0.531198 | 8.4:-23245632 | MS.gene011555:CDS |
| TAATATGCTGGATATACTAC+CGG | 0.533057 | 8.4:+23245715 | None:intergenic |
| CGATGAAGAATGTGAGTCCA+TGG | 0.537872 | 8.4:-23245815 | MS.gene011555:CDS |
| GTGGAGGAGGAGCAGGCAAA+GGG | 0.545011 | 8.4:+23245839 | None:intergenic |
| GATCCGGAAAAGTGCTAGCA+TGG | 0.549701 | 8.4:-23248245 | MS.gene011555:CDS |
| AACCCTGATCATGGTGCTGA+TGG | 0.553194 | 8.4:-23248145 | MS.gene011555:CDS |
| GTCGGGCTTTAATGGGGCAG+AGG | 0.557337 | 8.4:+23245762 | None:intergenic |
| TGCAACAATATCAAACAGGC+TGG | 0.557484 | 8.4:+23246644 | None:intergenic |
| TGTTCTCATTGCAGCCACAA+TGG | 0.558526 | 8.4:-23248331 | MS.gene011555:CDS |
| GGTAATCTTAGCCACTATAG+CGG | 0.560908 | 8.4:-23248223 | MS.gene011555:CDS |
| TCTCGTAAACTACTTGAAGA+AGG | 0.563354 | 8.4:-23245499 | MS.gene011555:CDS |
| GATTCTACAAACTCAAACGA+TGG | 0.564664 | 8.4:-23245793 | MS.gene011555:CDS |
| TATCCAGACCAATATGGAAG+AGG | 0.565662 | 8.4:+23245673 | None:intergenic |
| TTAGCCACTATAGCGGGTCC+GGG | 0.567360 | 8.4:-23248216 | MS.gene011555:CDS |
| TTTCATACAACTCCAGCTTG+TGG | 0.570031 | 8.4:-23245457 | MS.gene011555:CDS |
| AGTTTACGAGACAGAGTCGA+GGG | 0.572728 | 8.4:+23245511 | None:intergenic |
| TCAGGCAAAGCAATGTGTCT+AGG | 0.575738 | 8.4:-23246680 | MS.gene011555:CDS |
| AATACCGGGTCAAATACTCC+TGG | 0.575888 | 8.4:-23248181 | MS.gene011555:CDS |
| TTGGAGTAAGATTAACCGAT+GGG | 0.581339 | 8.4:-23248267 | MS.gene011555:CDS |
| TGCTGATGGTTATGGTTCTG+AGG | 0.588306 | 8.4:-23248131 | MS.gene011555:CDS |
| GGATTGAACAAGCTGGGCAA+AGG | 0.588333 | 8.4:-23246783 | MS.gene011555:CDS |
| AACCATCAGCACCATGATCA+GGG | 0.589650 | 8.4:+23248143 | None:intergenic |
| CCTGGTGAAAACCCTGATCA+TGG | 0.590290 | 8.4:-23248154 | MS.gene011555:CDS |
| GTAATCTTAGCCACTATAGC+GGG | 0.591144 | 8.4:-23248222 | MS.gene011555:CDS |
| CGGGAAGTAGAAGAAGAACC+AGG | 0.591204 | 8.4:+23248100 | None:intergenic |
| ATCAATGTCGATGAACTCGT+TGG | 0.598709 | 8.4:-23245577 | MS.gene011555:CDS |
| GACTCACATTCTTCATCGAG+TGG | 0.599669 | 8.4:+23245820 | None:intergenic |
| AGAAGGTCCTTCTAGACAGT+CGG | 0.599702 | 8.4:-23245482 | MS.gene011555:CDS |
| CAACTACAAACTGAAACAGA+AGG | 0.603118 | 8.4:-23245868 | MS.gene011555:CDS |
| ATCCGGAAAAGTGCTAGCAT+GGG | 0.615368 | 8.4:-23248244 | MS.gene011555:CDS |
| ATTGATGTCGGGCTTTAATG+GGG | 0.617600 | 8.4:+23245756 | None:intergenic |
| TTCTTGAGTTGTGCCCATTG+TGG | 0.619382 | 8.4:+23248317 | None:intergenic |
| ATCAAGGACACCTACTCAAG+TGG | 0.620432 | 8.4:-23246727 | MS.gene011555:CDS |
| GCTGCAATGAGAACAACGAC+GGG | 0.624049 | 8.4:+23248339 | None:intergenic |
| CGACATCAATGCACAAGCGT+CGG | 0.624911 | 8.4:-23245743 | MS.gene011555:CDS |
| CTGGGCAAAGGTGATTGGCG+TGG | 0.626265 | 8.4:-23246771 | MS.gene011555:CDS |
| TTTGGAGTAAGATTAACCGA+TGG | 0.628079 | 8.4:-23248268 | MS.gene011555:CDS |
| ATGTGTCTAGGCGGAAGAGA+CGG | 0.634804 | 8.4:-23246668 | MS.gene011555:CDS |
| AATATGCTGGATATACTACC+GGG | 0.636844 | 8.4:+23245716 | None:intergenic |
| TGGGCTCTTGGAATGTACTG+GGG | 0.642523 | 8.4:+23245600 | None:intergenic |
| GCGTGACTGGCCACTTGAGT+AGG | 0.645270 | 8.4:+23246717 | None:intergenic |
| GGCTGCAATGAGAACAACGA+CGG | 0.647502 | 8.4:+23248338 | None:intergenic |
| TTAGCTGACAAGAAGTCTTG+CGG | 0.653600 | 8.4:+23245892 | None:intergenic |
| TGCAGGCACTCCATGGACTG+AGG | 0.655185 | 8.4:-23246829 | MS.gene011555:intron |
| GGTATTCAAAAGTCCAGACC+CGG | 0.655952 | 8.4:+23248198 | None:intergenic |
| TCAAGAACTTGTCCAAATCG+TGG | 0.664250 | 8.4:-23248301 | MS.gene011555:CDS |
| TAGTTTACGAGACAGAGTCG+AGG | 0.668337 | 8.4:+23245510 | None:intergenic |
| TCACATTCTTCATCGAGTGG+AGG | 0.671641 | 8.4:+23245823 | None:intergenic |
| AGGCACTCCATGGACTGAGG+AGG | 0.685831 | 8.4:-23246826 | MS.gene011555:CDS |
| GGCAAAGCAATGTGTCTAGG+CGG | 0.687559 | 8.4:-23246677 | MS.gene011555:CDS |
| TGAACCAGGAGTATTTGACC+CGG | 0.708436 | 8.4:+23248177 | None:intergenic |
| GTTTACGAGACAGAGTCGAG+GGG | 0.738520 | 8.4:+23245512 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAATATTTTATTTGC+AGG | - | chr8.4:23246941-23246960 | MS.gene011555:intron | 10.0% |
| !!! | GAAAAAGTATTAAAAAAAAA+CGG | + | chr8.4:23247619-23247638 | None:intergenic | 10.0% |
| !! | ATTAAAGAAAAAAACACATT+TGG | + | chr8.4:23247289-23247308 | None:intergenic | 15.0% |
| !! | ATTATTATGTTTGTTTAACT+TGG | - | chr8.4:23246096-23246115 | MS.gene011555:intron | 15.0% |
| !!! | AAATATCATTTAAAGCAAAA+AGG | + | chr8.4:23246702-23246721 | None:intergenic | 15.0% |
| !!! | TTATATTTTTGATTTTTGGT+TGG | - | chr8.4:23245889-23245908 | MS.gene011555:CDS | 15.0% |
| !! | ATATAGAATTTGGAAATAAG+GGG | + | chr8.4:23247181-23247200 | None:intergenic | 20.0% |
| !! | ATTTGGATAATCTTATCAAA+TGG | + | chr8.4:23247272-23247291 | None:intergenic | 20.0% |
| !! | CATATAGAATTTGGAAATAA+GGG | + | chr8.4:23247182-23247201 | None:intergenic | 20.0% |
| !! | GTGAAATATATGCATATTAA+TGG | + | chr8.4:23246163-23246182 | None:intergenic | 20.0% |
| !! | TAAAACATTGGTATTTAGTT+TGG | - | chr8.4:23247721-23247740 | MS.gene011555:intron | 20.0% |
| !! | TTATATGCAACATAATGTAA+AGG | + | chr8.4:23247219-23247238 | None:intergenic | 20.0% |
| !! | TTTGAATTCAATTATATAGC+TGG | - | chr8.4:23247558-23247577 | MS.gene011555:intron | 20.0% |
| !!! | AATATGCTCTTTTAACTATA+TGG | - | chr8.4:23246340-23246359 | MS.gene011555:intron | 20.0% |
| !!! | ATCTGAAATATATTGAATGT+TGG | - | chr8.4:23246004-23246023 | MS.gene011555:intron | 20.0% |
| !!! | CATTTTAAGCATATAGAATT+TGG | + | chr8.4:23247191-23247210 | None:intergenic | 20.0% |
| !!! | TAATGTTAGGTATACTTTTT+TGG | - | chr8.4:23246777-23246796 | MS.gene011555:CDS | 20.0% |
| !!! | TATTTTTGTTTTGATTTTGC+AGG | - | chr8.4:23247852-23247871 | MS.gene011555:intron | 20.0% |
| !!! | TTTGCTTTAAATGATATTTG+TGG | - | chr8.4:23246703-23246722 | MS.gene011555:CDS | 20.0% |
| ! | AACATTATTAATACACAGAG+AGG | + | chr8.4:23247429-23247448 | None:intergenic | 25.0% |
| ! | ATCAAATTAGTGAGAAATAC+GGG | + | chr8.4:23247686-23247705 | None:intergenic | 25.0% |
| ! | ATTTCTCACTAATTTGATGT+CGG | - | chr8.4:23247688-23247707 | MS.gene011555:intron | 25.0% |
| ! | CATCAAATTAGTGAGAAATA+CGG | + | chr8.4:23247687-23247706 | None:intergenic | 25.0% |
| ! | CTAGATGAATTCAAGTATAT+TGG | - | chr8.4:23245808-23245827 | MS.gene011555:CDS | 25.0% |
| ! | GCATATAGAATTTGGAAATA+AGG | + | chr8.4:23247183-23247202 | None:intergenic | 25.0% |
| ! | GTCTATGATAGATTAAATAC+CGG | - | chr8.4:23246249-23246268 | MS.gene011555:intron | 25.0% |
| ! | TAAATTATGTGATCTTGGTT+TGG | - | chr8.4:23245832-23245851 | MS.gene011555:CDS | 25.0% |
| ! | TCTATGATAGATTAAATACC+GGG | - | chr8.4:23246250-23246269 | MS.gene011555:intron | 25.0% |
| ! | TCTGTGTATTAATAATGTTC+TGG | - | chr8.4:23247430-23247449 | MS.gene011555:intron | 25.0% |
| ! | TTCAAATAGTCACTAATGTT+AGG | - | chr8.4:23246764-23246783 | MS.gene011555:CDS | 25.0% |
| ! | TTGGATAAATTATGTGATCT+TGG | - | chr8.4:23245827-23245846 | MS.gene011555:CDS | 25.0% |
| !! | ATGATATTGTTTGACCTTTT+AGG | - | chr8.4:23247307-23247326 | MS.gene011555:intron | 25.0% |
| !! | ATTTTCAAAGAATCCCTAAA+AGG | + | chr8.4:23247324-23247343 | None:intergenic | 25.0% |
| !! | TGATATTGTTTGACCTTTTA+GGG | - | chr8.4:23247308-23247327 | MS.gene011555:intron | 25.0% |
| !! | TTAAATGAGTCAAAGGTTTT+AGG | + | chr8.4:23246806-23246825 | None:intergenic | 25.0% |
| !! | TTCTGAACCTTCTAATTTTT+CGG | - | chr8.4:23247820-23247839 | MS.gene011555:intron | 25.0% |
| !!! | GAACATAGAATGTTTTTACT+TGG | - | chr8.4:23246983-23247002 | MS.gene011555:intron | 25.0% |
| !!! | GTCTTTTTTGAGAGAATTAT+TGG | - | chr8.4:23245973-23245992 | MS.gene011555:intron | 25.0% |
| AACCTAGTTAAATGAGTCAA+AGG | + | chr8.4:23246813-23246832 | None:intergenic | 30.0% | |
| AACCTTTGACTCATTTAACT+AGG | - | chr8.4:23246808-23246827 | MS.gene011555:CDS | 30.0% | |
| AAGAATGGAGAATAATATGC+TGG | + | chr8.4:23248087-23248106 | None:intergenic | 30.0% | |
| AATTCAATTATATAGCTGGC+TGG | - | chr8.4:23247562-23247581 | MS.gene011555:intron | 30.0% | |
| AATTGAATTCAAACCAACCA+GGG | + | chr8.4:23247551-23247570 | None:intergenic | 30.0% | |
| ACGCTCAAAAATATTTCATC+AGG | - | chr8.4:23247089-23247108 | MS.gene011555:intron | 30.0% | |
| ACTTCATGTGTTTCTTTCTT+AGG | + | chr8.4:23248156-23248175 | None:intergenic | 30.0% | |
| AGAAATCCCGAAAAATTAGA+AGG | + | chr8.4:23247830-23247849 | None:intergenic | 30.0% | |
| ATCATGACTGAAACAATCTT+TGG | - | chr8.4:23246419-23246438 | MS.gene011555:intron | 30.0% | |
| GAAAAATTAGAAGGTTCAGA+AGG | + | chr8.4:23247821-23247840 | None:intergenic | 30.0% | |
| GTATTCTAGTGCCTAATTAT+GGG | - | chr8.4:23246128-23246147 | MS.gene011555:intron | 30.0% | |
| GTTAGATATTGATAGAACCA+TGG | - | chr8.4:23247452-23247471 | MS.gene011555:intron | 30.0% | |
| TAAGAAAGAAACACATGAAG+TGG | - | chr8.4:23248155-23248174 | MS.gene011555:CDS | 30.0% | |
| TAATATGCTGGATATACTAC+CGG | + | chr8.4:23248075-23248094 | None:intergenic | 30.0% | |
| TAATTGAATTCAAACCAACC+AGG | + | chr8.4:23247552-23247571 | None:intergenic | 30.0% | |
| TATTCTAGTGCCTAATTATG+GGG | - | chr8.4:23246129-23246148 | MS.gene011555:intron | 30.0% | |
| TGACTCATTTAACTAGGTTT+CGG | - | chr8.4:23246814-23246833 | MS.gene011555:CDS | 30.0% | |
| TGTATTCTAGTGCCTAATTA+TGG | - | chr8.4:23246127-23246146 | MS.gene011555:intron | 30.0% | |
| TTTCTCACTAATTTGATGTC+GGG | - | chr8.4:23247689-23247708 | MS.gene011555:intron | 30.0% | |
| TTTGCTTGCATGTGAATTAT+TGG | - | chr8.4:23245758-23245777 | MS.gene011555:CDS | 30.0% | |
| ! | AAACATTGCATTTTCTGATG+TGG | - | chr8.4:23247749-23247768 | MS.gene011555:intron | 30.0% |
| ! | AAATGGACAATTTTCCCAAA+TGG | + | chr8.4:23247382-23247401 | None:intergenic | 30.0% |
| ! | CTTATCAAATGGTAATGAAC+AGG | + | chr8.4:23247261-23247280 | None:intergenic | 30.0% |
| ! | GTCTATCTAAAGTTTGATCT+AGG | + | chr8.4:23246680-23246699 | None:intergenic | 30.0% |
| ! | TCTGAACCTTCTAATTTTTC+GGG | - | chr8.4:23247821-23247840 | MS.gene011555:intron | 30.0% |
| ! | TTGAATGTTGGTCTAAGAAA+TGG | - | chr8.4:23246016-23246035 | MS.gene011555:intron | 30.0% |
| !! | AACATTGGTATTTAGTTTGG+AGG | - | chr8.4:23247724-23247743 | MS.gene011555:intron | 30.0% |
| !! | GCTCTTTTAACTATATGGTT+CGG | - | chr8.4:23246345-23246364 | MS.gene011555:intron | 30.0% |
| !!! | AACATTGTTTTTGAACCACA+TGG | + | chr8.4:23246060-23246079 | None:intergenic | 30.0% |
| !!! | ACAAACCCTTTTTTCTTTCA+CGG | + | chr8.4:23245710-23245729 | None:intergenic | 30.0% |
| !!! | GGGACTGATTTTTAAAACAT+TGG | - | chr8.4:23247709-23247728 | MS.gene011555:intron | 30.0% |
| !!! | TGTTAGGTATACTTTTTTGG+AGG | - | chr8.4:23246780-23246799 | MS.gene011555:CDS | 30.0% |
| !!! | TTTGGCAATGTTTTAATAGC+CGG | - | chr8.4:23247485-23247504 | MS.gene011555:intron | 30.0% |
| !!! | TTTTTGGTTGGTGTAATTGT+AGG | - | chr8.4:23245901-23245920 | MS.gene011555:CDS | 30.0% |
| AAGAAATGTGACCCTATTCA+GGG | + | chr8.4:23246568-23246587 | None:intergenic | 35.0% | |
| AATATGCTGGATATACTACC+GGG | + | chr8.4:23248074-23248093 | None:intergenic | 35.0% | |
| AATGGATAGGTATAAGTCTC+AGG | - | chr8.4:23246034-23246053 | MS.gene011555:intron | 35.0% | |
| AATTCACATGCAAGCAAAAG+AGG | + | chr8.4:23245756-23245775 | None:intergenic | 35.0% | |
| ACATTACAGTCAGCTTCAAT+GGG | - | chr8.4:23246878-23246897 | MS.gene011555:intron | 35.0% | |
| ACATTTCTTAAACGACGACA+TGG | - | chr8.4:23246579-23246598 | MS.gene011555:intron | 35.0% | |
| ACCAATATGGAAGAGGAAAA+GGG | + | chr8.4:23248110-23248129 | None:intergenic | 35.0% | |
| ACCTGGACAAAAATAAAGCT+TGG | + | chr8.4:23246445-23246464 | None:intergenic | 35.0% | |
| ACTTCCCGTGAAAGAAAAAA+GGG | - | chr8.4:23245702-23245721 | MS.gene011555:CDS | 35.0% | |
| ATTACACACAACCCTGAATA+GGG | - | chr8.4:23246554-23246573 | MS.gene011555:intron | 35.0% | |
| ATTCTAGTGCCTAATTATGG+GGG | - | chr8.4:23246130-23246149 | MS.gene011555:intron | 35.0% | |
| CAAATTCAGCTAAACAGTAC+TGG | + | chr8.4:23246841-23246860 | None:intergenic | 35.0% | |
| CAACTACAAACTGAAACAGA+AGG | - | chr8.4:23247919-23247938 | MS.gene011555:intron | 35.0% | |
| CATCAACATCCAAAATATCC+AGG | + | chr8.4:23247405-23247424 | None:intergenic | 35.0% | |
| CATCCAAAATATCCAGGAAA+TGG | + | chr8.4:23247399-23247418 | None:intergenic | 35.0% | |
| CATCTGCAACAATATCAAAC+AGG | + | chr8.4:23247150-23247169 | None:intergenic | 35.0% | |
| CCAGGAACTATGTTATATCA+AGG | - | chr8.4:23247044-23247063 | MS.gene011555:intron | 35.0% | |
| CCTTGATATAACATAGTTCC+TGG | + | chr8.4:23247047-23247066 | None:intergenic | 35.0% | |
| CTGAGTTTAGGTGAAACTAT+TGG | - | chr8.4:23248243-23248262 | MS.gene011555:CDS | 35.0% | |
| CTGTTTCAGCTATCTAAACT+AGG | - | chr8.4:23246182-23246201 | MS.gene011555:intron | 35.0% | |
| GATTCTACAAACTCAAACGA+TGG | - | chr8.4:23247994-23248013 | MS.gene011555:intron | 35.0% | |
| GGTTCAAGACACAGAAAAAA+TGG | - | chr8.4:23246498-23246517 | MS.gene011555:intron | 35.0% | |
| TAAGAAATGTGACCCTATTC+AGG | + | chr8.4:23246569-23246588 | None:intergenic | 35.0% | |
| TACTTCCCGTGAAAGAAAAA+AGG | - | chr8.4:23245701-23245720 | MS.gene011555:CDS | 35.0% | |
| TAGGAGTAACTAGACAAGAA+AGG | - | chr8.4:23245920-23245939 | MS.gene011555:intron | 35.0% | |
| TCTCGTAAACTACTTGAAGA+AGG | - | chr8.4:23248288-23248307 | MS.gene011555:CDS | 35.0% | |
| TTACTTGGATTGAACAAGCT+GGG | - | chr8.4:23246998-23247017 | MS.gene011555:intron | 35.0% | |
| TTAGAAGGTTCAGAAGGAAA+AGG | + | chr8.4:23247815-23247834 | None:intergenic | 35.0% | |
| TTGGAGTAAGATTAACCGAT+GGG | - | chr8.4:23245520-23245539 | MS.gene011555:CDS | 35.0% | |
| TTTACTTGGATTGAACAAGC+TGG | - | chr8.4:23246997-23247016 | MS.gene011555:intron | 35.0% | |
| ! | ATGGTAATGAACAGGTTATG+TGG | + | chr8.4:23247253-23247272 | None:intergenic | 35.0% |
| ! | GTTTGAGTTTGTAGAATCCA+TGG | + | chr8.4:23247992-23248011 | None:intergenic | 35.0% |
| ! | TGCACAGAGTATCAGATTTA+GGG | + | chr8.4:23246620-23246639 | None:intergenic | 35.0% |
| ! | TGTCCATTTCCTGGATATTT+TGG | - | chr8.4:23247393-23247412 | MS.gene011555:intron | 35.0% |
| ! | TGTTGGTCTAAGAAATGGAT+AGG | - | chr8.4:23246021-23246040 | MS.gene011555:intron | 35.0% |
| ! | TTGCACAGAGTATCAGATTT+AGG | + | chr8.4:23246621-23246640 | None:intergenic | 35.0% |
| ! | TTTGGAGTAAGATTAACCGA+TGG | - | chr8.4:23245519-23245538 | MS.gene011555:CDS | 35.0% |
| ! | TTTTCTGTGTCTTGAACCTT+CGG | + | chr8.4:23246496-23246515 | None:intergenic | 35.0% |
| !! | GAAATATTTTTGAGCGTGAC+TGG | + | chr8.4:23247086-23247105 | None:intergenic | 35.0% |
| !! | TATGTGATCTTGGTTTGGAT+TGG | - | chr8.4:23245837-23245856 | MS.gene011555:CDS | 35.0% |
| !!! | CAAACCCTTTTTTCTTTCAC+GGG | + | chr8.4:23245709-23245728 | None:intergenic | 35.0% |
| ACGAGTTCATCGACATTGAT+TGG | + | chr8.4:23248210-23248229 | None:intergenic | 40.0% | |
| ATAGATTAAATACCGGGCTG+TGG | - | chr8.4:23246256-23246275 | MS.gene011555:intron | 40.0% | |
| ATCAATGTCGATGAACTCGT+TGG | - | chr8.4:23248210-23248229 | MS.gene011555:CDS | 40.0% | |
| ATTGATAGAACCATGGCTCT+GGG | - | chr8.4:23247459-23247478 | MS.gene011555:intron | 40.0% | |
| CAATGCTTGCAGATCATTAG+GGG | + | chr8.4:23246316-23246335 | None:intergenic | 40.0% | |
| CACATTACAGTCAGCTTCAA+TGG | - | chr8.4:23246877-23246896 | MS.gene011555:intron | 40.0% | |
| CATTACAGTCAGCTTCAATG+GGG | - | chr8.4:23246879-23246898 | MS.gene011555:intron | 40.0% | |
| CCAATGCTTGCAGATCATTA+GGG | + | chr8.4:23246317-23246336 | None:intergenic | 40.0% | |
| GACCAATATGGAAGAGGAAA+AGG | + | chr8.4:23248111-23248130 | None:intergenic | 40.0% | |
| GATTACACACAACCCTGAAT+AGG | - | chr8.4:23246553-23246572 | MS.gene011555:intron | 40.0% | |
| GGCATGTCAAAACTGAGTTT+AGG | - | chr8.4:23248231-23248250 | MS.gene011555:CDS | 40.0% | |
| GGTAATCTTAGCCACTATAG+CGG | - | chr8.4:23245564-23245583 | MS.gene011555:CDS | 40.0% | |
| GTAATCTTAGCCACTATAGC+GGG | - | chr8.4:23245565-23245584 | MS.gene011555:CDS | 40.0% | |
| TAAGATTAACCGATGGGATC+CGG | - | chr8.4:23245526-23245545 | MS.gene011555:CDS | 40.0% | |
| TATCCAGACCAATATGGAAG+AGG | + | chr8.4:23248117-23248136 | None:intergenic | 40.0% | |
| TATTGATAGAACCATGGCTC+TGG | - | chr8.4:23247458-23247477 | MS.gene011555:intron | 40.0% | |
| TCAAGAACTTGTCCAAATCG+TGG | - | chr8.4:23245486-23245505 | MS.gene011555:CDS | 40.0% | |
| TGCAACAATATCAAACAGGC+TGG | + | chr8.4:23247146-23247165 | None:intergenic | 40.0% | |
| TGGGAAAATTGTCCATTTCC+TGG | - | chr8.4:23247384-23247403 | MS.gene011555:intron | 40.0% | |
| TGTGTTTCTTTCTTAGGAGC+TGG | + | chr8.4:23248150-23248169 | None:intergenic | 40.0% | |
| TTAGCTGACAAGAAGTCTTG+CGG | + | chr8.4:23247898-23247917 | None:intergenic | 40.0% | |
| TTAGTGAGAAATACGGGTCA+TGG | + | chr8.4:23247680-23247699 | None:intergenic | 40.0% | |
| TTCAGTCATGATTCGAACTC+TGG | + | chr8.4:23246411-23246430 | None:intergenic | 40.0% | |
| TTCATACAACTCCAGCTTGT+GGG | - | chr8.4:23248331-23248350 | MS.gene011555:CDS | 40.0% | |
| TTTCATACAACTCCAGCTTG+TGG | - | chr8.4:23248330-23248349 | MS.gene011555:CDS | 40.0% | |
| TTTCCTCTTCCATATTGGTC+TGG | - | chr8.4:23248111-23248130 | MS.gene011555:CDS | 40.0% | |
| TTTCTGTGTCTTGAACCTTC+GGG | + | chr8.4:23246495-23246514 | None:intergenic | 40.0% | |
| ! | ATTGATGTCGGGCTTTAATG+GGG | + | chr8.4:23248034-23248053 | None:intergenic | 40.0% |
| ! | CACGACACTGTTTTCCATTT+GGG | - | chr8.4:23247365-23247384 | MS.gene011555:intron | 40.0% |
| ! | CATTGATGTCGGGCTTTAAT+GGG | + | chr8.4:23248035-23248054 | None:intergenic | 40.0% |
| ! | CGAGTTCATCGACATTGATT+GGG | + | chr8.4:23248209-23248228 | None:intergenic | 40.0% |
| ! | GCACAGAGTATCAGATTTAG+GGG | + | chr8.4:23246619-23246638 | None:intergenic | 40.0% |
| ! | GGTGAAACTATTGGTGATAC+TGG | - | chr8.4:23248252-23248271 | MS.gene011555:CDS | 40.0% |
| ! | TCACGACACTGTTTTCCATT+TGG | - | chr8.4:23247364-23247383 | MS.gene011555:intron | 40.0% |
| ! | TCCCTTTTCCTCTTCCATAT+TGG | - | chr8.4:23248106-23248125 | MS.gene011555:CDS | 40.0% |
| !! | TTTTATTTGCAGGCACTCCA+TGG | - | chr8.4:23246951-23246970 | MS.gene011555:intron | 40.0% |
| !!! | GCCAAGCTTTATTTTTGTCC+AGG | - | chr8.4:23246441-23246460 | MS.gene011555:intron | 40.0% |
| AAAAACGGTTGAACCAGCCA+TGG | + | chr8.4:23247604-23247623 | None:intergenic | 45.0% | |
| AAACCAACCAGGGAACTAGT+TGG | + | chr8.4:23247541-23247560 | None:intergenic | 45.0% | |
| AACAGCTTCACACCACGATT+TGG | + | chr8.4:23245501-23245520 | None:intergenic | 45.0% | |
| AACCATCAGCACCATGATCA+GGG | + | chr8.4:23245647-23245666 | None:intergenic | 45.0% | |
| AATACCGGGTCAAATACTCC+TGG | - | chr8.4:23245606-23245625 | MS.gene011555:CDS | 45.0% | |
| AATCGTGGTGTGAAGCTGTT+TGG | - | chr8.4:23245501-23245520 | MS.gene011555:CDS | 45.0% | |
| AGAAGGTCCTTCTAGACAGT+CGG | - | chr8.4:23248305-23248324 | MS.gene011555:CDS | 45.0% | |
| AGTTTACGAGACAGAGTCGA+GGG | + | chr8.4:23248279-23248298 | None:intergenic | 45.0% | |
| ATCAAGGACACCTACTCAAG+TGG | - | chr8.4:23247060-23247079 | MS.gene011555:intron | 45.0% | |
| ATCCTTCCCAAGAGTGAGTA+GGG | - | chr8.4:23246654-23246673 | MS.gene011555:CDS | 45.0% | |
| ATTGGGCTCTTGGAATGTAC+TGG | + | chr8.4:23248192-23248211 | None:intergenic | 45.0% | |
| CAGAAGGAAAAGGAAAAGCG+AGG | + | chr8.4:23247805-23247824 | None:intergenic | 45.0% | |
| CCCTAATGATCTGCAAGCAT+TGG | - | chr8.4:23246314-23246333 | MS.gene011555:intron | 45.0% | |
| CGATGAAGAATGTGAGTCCA+TGG | - | chr8.4:23247972-23247991 | MS.gene011555:intron | 45.0% | |
| GACTCACATTCTTCATCGAG+TGG | + | chr8.4:23247970-23247989 | None:intergenic | 45.0% | |
| GCCAATGCTTGCAGATCATT+AGG | + | chr8.4:23246318-23246337 | None:intergenic | 45.0% | |
| GGAAGAGGAAAAGGGAAGAA+TGG | + | chr8.4:23248102-23248121 | None:intergenic | 45.0% | |
| GGACTGTATCCAGACCAATA+TGG | + | chr8.4:23248123-23248142 | None:intergenic | 45.0% | |
| GGTATTCAAAAGTCCAGACC+CGG | + | chr8.4:23245592-23245611 | None:intergenic | 45.0% | |
| GTCAGCTTCAATGGGGATTA+CGG | - | chr8.4:23246886-23246905 | MS.gene011555:intron | 45.0% | |
| GTTCTCATTGCAGCCACAAT+GGG | - | chr8.4:23245457-23245476 | MS.gene011555:CDS | 45.0% | |
| TAACCATCAGCACCATGATC+AGG | + | chr8.4:23245648-23245667 | None:intergenic | 45.0% | |
| TACTCACTCTTGGGAAGGAT+GGG | + | chr8.4:23246654-23246673 | None:intergenic | 45.0% | |
| TAGTTTACGAGACAGAGTCG+AGG | + | chr8.4:23248280-23248299 | None:intergenic | 45.0% | |
| TCAAATACTCCTGGTTCACC+TGG | - | chr8.4:23245615-23245634 | MS.gene011555:CDS | 45.0% | |
| TCACATTCTTCATCGAGTGG+AGG | + | chr8.4:23247967-23247986 | None:intergenic | 45.0% | |
| TCAGGCAAAGCAATGTGTCT+AGG | - | chr8.4:23247107-23247126 | MS.gene011555:intron | 45.0% | |
| TGAAAAGCCGACTGTCTAGA+AGG | + | chr8.4:23248315-23248334 | None:intergenic | 45.0% | |
| TGTCTTGAACCTTCGGGAAA+GGG | + | chr8.4:23246489-23246508 | None:intergenic | 45.0% | |
| TGTTCTCATTGCAGCCACAA+TGG | - | chr8.4:23245456-23245475 | MS.gene011555:CDS | 45.0% | |
| TTGGGCTCTTGGAATGTACT+GGG | + | chr8.4:23248191-23248210 | None:intergenic | 45.0% | |
| ! | ACTATATGGTTCGGCTCAAG+TGG | - | chr8.4:23246354-23246373 | MS.gene011555:intron | 45.0% |
| ! | ATCGACATTGATTGGGCTCT+TGG | + | chr8.4:23248202-23248221 | None:intergenic | 45.0% |
| ! | CAGAGTATCAGATTTAGGGG+AGG | + | chr8.4:23246616-23246635 | None:intergenic | 45.0% |
| ! | GCATTGATGTCGGGCTTTAA+TGG | + | chr8.4:23248036-23248055 | None:intergenic | 45.0% |
| ! | GGGTCTGGACTTTTGAATAC+CGG | - | chr8.4:23245591-23245610 | MS.gene011555:CDS | 45.0% |
| ! | GGTCTGGACTTTTGAATACC+GGG | - | chr8.4:23245592-23245611 | MS.gene011555:CDS | 45.0% |
| ! | TACCCATGCTAGCACTTTTC+CGG | + | chr8.4:23245548-23245567 | None:intergenic | 45.0% |
| ! | TGCGGTACCATTGAAGTATC+AGG | + | chr8.4:23247880-23247899 | None:intergenic | 45.0% |
| ! | TGCTGATGGTTATGGTTCTG+AGG | - | chr8.4:23245656-23245675 | MS.gene011555:CDS | 45.0% |
| ! | TTCTTGAGTTGTGCCCATTG+TGG | + | chr8.4:23245473-23245492 | None:intergenic | 45.0% |
| ! | TTGATAGAACCATGGCTCTG+GGG | - | chr8.4:23247460-23247479 | MS.gene011555:intron | 45.0% |
| ! | TTTTTGTCCAGGTCGAACTC+TGG | - | chr8.4:23246452-23246471 | MS.gene011555:intron | 45.0% |
| !! | ATCCGGAAAAGTGCTAGCAT+GGG | - | chr8.4:23245543-23245562 | MS.gene011555:CDS | 45.0% |
| !! | GATCATGGTGCTGATGGTTA+TGG | - | chr8.4:23245648-23245667 | MS.gene011555:CDS | 45.0% |
| !! | TGAACCAGGAGTATTTGACC+CGG | + | chr8.4:23245613-23245632 | None:intergenic | 45.0% |
| !!! | GGTTCTGAGGATTTTGTTCC+TGG | - | chr8.4:23245669-23245688 | MS.gene011555:CDS | 45.0% |
| !!! | AATATTATATTTTTGATTTT+TGG | - | chr8.4:23245885-23245904 | MS.gene011555:CDS | 5.0% |
| AACCAGCCATGGTTGAACTG+CGG | + | chr8.4:23247593-23247612 | None:intergenic | 50.0% | |
| ACAAGCTGGGCAAAGGTGAT+TGG | - | chr8.4:23247011-23247030 | MS.gene011555:intron | 50.0% | |
| ATCTAGGCCCTACTCACTCT+TGG | + | chr8.4:23246664-23246683 | None:intergenic | 50.0% | |
| ATGTGTCTAGGCGGAAGAGA+CGG | - | chr8.4:23247119-23247138 | MS.gene011555:intron | 50.0% | |
| ATTAAATACCGGGCTGTGGC+AGG | - | chr8.4:23246260-23246279 | MS.gene011555:intron | 50.0% | |
| CAGGTCGAACTCTGGATTAC+CGG | - | chr8.4:23246460-23246479 | MS.gene011555:intron | 50.0% | |
| CATCCTTCCCAAGAGTGAGT+AGG | - | chr8.4:23246653-23246672 | MS.gene011555:CDS | 50.0% | |
| CATTCTTCATCGAGTGGAGG+AGG | + | chr8.4:23247964-23247983 | None:intergenic | 50.0% | |
| CCTGGTGAAAACCCTGATCA+TGG | - | chr8.4:23245633-23245652 | MS.gene011555:CDS | 50.0% | |
| CGACATCAATGCACAAGCGT+CGG | - | chr8.4:23248044-23248063 | MS.gene011555:intron | 50.0% | |
| CGGGAAGTAGAAGAAGAACC+AGG | + | chr8.4:23245690-23245709 | None:intergenic | 50.0% | |
| CTACTCACTCTTGGGAAGGA+TGG | + | chr8.4:23246655-23246674 | None:intergenic | 50.0% | |
| CTATGTTCCTCCTCAGTCCA+TGG | + | chr8.4:23246971-23246990 | None:intergenic | 50.0% | |
| CTCTTGGAATGTACTGGGGT+TGG | + | chr8.4:23248186-23248205 | None:intergenic | 50.0% | |
| GAACCAACTAGTTCCCTGGT+TGG | - | chr8.4:23247535-23247554 | MS.gene011555:intron | 50.0% | |
| GCAGGCACCTGATACTTCAA+TGG | - | chr8.4:23247870-23247889 | MS.gene011555:intron | 50.0% | |
| GCTGCAATGAGAACAACGAC+GGG | + | chr8.4:23245451-23245470 | None:intergenic | 50.0% | |
| GGACCTCATCCCCCATAATT+AGG | + | chr8.4:23246142-23246161 | None:intergenic | 50.0% | |
| GGATTGAACAAGCTGGGCAA+AGG | - | chr8.4:23247004-23247023 | MS.gene011555:intron | 50.0% | |
| GGCAAAGCAATGTGTCTAGG+CGG | - | chr8.4:23247110-23247129 | MS.gene011555:intron | 50.0% | |
| GGCTGCAATGAGAACAACGA+CGG | + | chr8.4:23245452-23245471 | None:intergenic | 50.0% | |
| GGGGTGAAACAAGCTAGACA+AGG | + | chr8.4:23246297-23246316 | None:intergenic | 50.0% | |
| GGTATAAGTCTCAGGCCATG+TGG | - | chr8.4:23246042-23246061 | MS.gene011555:intron | 50.0% | |
| GTGCCTAATTATGGGGGATG+AGG | - | chr8.4:23246136-23246155 | MS.gene011555:intron | 50.0% | |
| GTGTCTTGAACCTTCGGGAA+AGG | + | chr8.4:23246490-23246509 | None:intergenic | 50.0% | |
| GTTGAACCGCAGTTCAACCA+TGG | - | chr8.4:23247584-23247603 | MS.gene011555:intron | 50.0% | |
| GTTTACGAGACAGAGTCGAG+GGG | + | chr8.4:23248278-23248297 | None:intergenic | 50.0% | |
| TCTAGGCCCTACTCACTCTT+GGG | + | chr8.4:23246663-23246682 | None:intergenic | 50.0% | |
| TGGGCTCTTGGAATGTACTG+GGG | + | chr8.4:23248190-23248209 | None:intergenic | 50.0% | |
| ! | AACCCTGATCATGGTGCTGA+TGG | - | chr8.4:23245642-23245661 | MS.gene011555:CDS | 50.0% |
| ! | AGCACTTTTCCGGATCCCAT+CGG | + | chr8.4:23245538-23245557 | None:intergenic | 50.0% |
| ! | CCATGATCAGGGTTTTCACC+AGG | + | chr8.4:23245636-23245655 | None:intergenic | 50.0% |
| ! | CGACGCTTGTGCATTGATGT+CGG | + | chr8.4:23248046-23248065 | None:intergenic | 50.0% |
| ! | GACGCTTGTGCATTGATGTC+GGG | + | chr8.4:23248045-23248064 | None:intergenic | 50.0% |
| ! | GGAACTAGTTGGTTCCCTCT+CGG | + | chr8.4:23247530-23247549 | None:intergenic | 50.0% |
| ! | TCTTTCTTAGGAGCTGGCTC+AGG | + | chr8.4:23248144-23248163 | None:intergenic | 50.0% |
| !! | AACCATGGCTCTGGGGTATT+TGG | - | chr8.4:23247467-23247486 | MS.gene011555:intron | 50.0% |
| !! | GATCCGGAAAAGTGCTAGCA+TGG | - | chr8.4:23245542-23245561 | MS.gene011555:CDS | 50.0% |
| AACCGCAGTTCAACCATGGC+TGG | - | chr8.4:23247588-23247607 | MS.gene011555:intron | 55.0% | |
| AATAGCCGGACCGAACCAAC+CGG | - | chr8.4:23247499-23247518 | MS.gene011555:intron | 55.0% | |
| CACAGAACAGTCCCACAAGC+TGG | + | chr8.4:23248345-23248364 | None:intergenic | 55.0% | |
| CACTCTTGGGAAGGATGGGA+AGG | + | chr8.4:23246650-23246669 | None:intergenic | 55.0% | |
| CGGTAATCCAGAGTTCGACC+TGG | + | chr8.4:23246462-23246481 | None:intergenic | 55.0% | |
| GAGGGAACCAACTAGTTCCC+TGG | - | chr8.4:23247531-23247550 | MS.gene011555:intron | 55.0% | |
| GTCGAACTCTGGATTACCGG+AGG | - | chr8.4:23246463-23246482 | MS.gene011555:intron | 55.0% | |
| GTGATTGGCGTGGAATTGCC+AGG | - | chr8.4:23247026-23247045 | MS.gene011555:intron | 55.0% | |
| TGCCAAATACCCCAGAGCCA+TGG | + | chr8.4:23247472-23247491 | None:intergenic | 55.0% | |
| ! | GGGTTTTCACCAGGTGAACC+AGG | + | chr8.4:23245627-23245646 | None:intergenic | 55.0% |
| !! | CTTAGCCACTATAGCGGGTC+CGG | - | chr8.4:23245570-23245589 | MS.gene011555:CDS | 55.0% |
| !! | TTAGCCACTATAGCGGGTCC+GGG | - | chr8.4:23245571-23245590 | MS.gene011555:CDS | 55.0% |
| AACCAACCGGTTGTGCCGAG+AGG | - | chr8.4:23247512-23247531 | MS.gene011555:intron | 60.0% | |
| AACCTTCGGGAAAGGGCCTC+CGG | + | chr8.4:23246482-23246501 | None:intergenic | 60.0% | |
| ACCAACCGGTTGTGCCGAGA+GGG | - | chr8.4:23247513-23247532 | MS.gene011555:intron | 60.0% | |
| AGTGGAGGAGGAGCAGGCAA+AGG | + | chr8.4:23247952-23247971 | None:intergenic | 60.0% | |
| CTGGGCAAAGGTGATTGGCG+TGG | - | chr8.4:23247016-23247035 | MS.gene011555:intron | 60.0% | |
| GGCCCTACTCACTCTTGGGA+AGG | + | chr8.4:23246659-23246678 | None:intergenic | 60.0% | |
| GTCAAACACCTGCCACAGCC+CGG | + | chr8.4:23246271-23246290 | None:intergenic | 60.0% | |
| GTGGAGGAGGAGCAGGCAAA+GGG | + | chr8.4:23247951-23247970 | None:intergenic | 60.0% | |
| TCATCGAGTGGAGGAGGAGC+AGG | + | chr8.4:23247958-23247977 | None:intergenic | 60.0% | |
| TGGTTCCCTCTCGGCACAAC+CGG | + | chr8.4:23247521-23247540 | None:intergenic | 60.0% | |
| ! | AGGCACTCCATGGACTGAGG+AGG | - | chr8.4:23246961-23246980 | MS.gene011555:intron | 60.0% |
| ! | CTCGGCACAACCGGTTGGTT+CGG | + | chr8.4:23247512-23247531 | None:intergenic | 60.0% |
| ! | GCGTGACTGGCCACTTGAGT+AGG | + | chr8.4:23247073-23247092 | None:intergenic | 60.0% |
| ! | GTCGGGCTTTAATGGGGCAG+AGG | + | chr8.4:23248028-23248047 | None:intergenic | 60.0% |
| ! | TGCAGGCACTCCATGGACTG+AGG | - | chr8.4:23246958-23246977 | MS.gene011555:intron | 60.0% |
| !! | CACAACCGGTTGGTTCGGTC+CGG | + | chr8.4:23247507-23247526 | None:intergenic | 60.0% |
| !! | TGCACAAGCGTCGGCTTACC+CGG | - | chr8.4:23248053-23248072 | MS.gene011555:intron | 60.0% |
| CAGACCCGGACCCGCTATAG+TGG | + | chr8.4:23245578-23245597 | None:intergenic | 65.0% | |
| TACCGGAGGCCCTTTCCCGA+AGG | - | chr8.4:23246477-23246496 | MS.gene011555:intron | 65.0% | |
| TCCCTCTCGGCACAACCGGT+TGG | + | chr8.4:23247517-23247536 | None:intergenic | 65.0% | |
| !! | CACTATAGCGGGTCCGGGTC+TGG | - | chr8.4:23245576-23245595 | MS.gene011555:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 23245444 | 23248365 | 23245444 | ID=MS.gene011555 |
| chr8.4 | mRNA | 23245444 | 23248365 | 23245444 | ID=MS.gene011555.t1;Parent=MS.gene011555 |
| chr8.4 | exon | 23248086 | 23248365 | 23248086 | ID=MS.gene011555.t1.exon1;Parent=MS.gene011555.t1 |
| chr8.4 | CDS | 23248086 | 23248365 | 23248086 | ID=cds.MS.gene011555.t1;Parent=MS.gene011555.t1 |
| chr8.4 | exon | 23246638 | 23246846 | 23246638 | ID=MS.gene011555.t1.exon2;Parent=MS.gene011555.t1 |
| chr8.4 | CDS | 23246638 | 23246846 | 23246638 | ID=cds.MS.gene011555.t1;Parent=MS.gene011555.t1 |
| chr8.4 | exon | 23245444 | 23245935 | 23245444 | ID=MS.gene011555.t1.exon3;Parent=MS.gene011555.t1 |
| chr8.4 | CDS | 23245444 | 23245935 | 23245444 | ID=cds.MS.gene011555.t1;Parent=MS.gene011555.t1 |
| Gene Sequence |
| Protein sequence |
