Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011570.t1 | KEH31637.1 | 90.2 | 417 | 36 | 1 | 138 | 554 | 104 | 515 | 1.10E-225 | 792.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011570.t1 | F4IXE7 | 32.5 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 1.4e-53 | 212.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011570.t1 | A0A072UPL4 | 90.2 | 417 | 36 | 1 | 138 | 554 | 104 | 515 | 7.8e-226 | 792.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene011570.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011570.t1 | MTR_4g099530 | 82.792 | 523 | 47 | 3 | 65 | 554 | 3 | 515 | 0.0 | 889 |
| MS.gene011570.t1 | MTR_1g103830 | 33.482 | 448 | 251 | 14 | 142 | 554 | 603 | 1038 | 2.35e-65 | 231 |
| MS.gene011570.t1 | MTR_1g072130 | 33.097 | 423 | 245 | 11 | 142 | 537 | 809 | 1220 | 3.34e-63 | 225 |
| MS.gene011570.t1 | MTR_2g078040 | 30.024 | 423 | 262 | 13 | 139 | 537 | 754 | 1166 | 6.29e-53 | 195 |
| MS.gene011570.t1 | MTR_5g071340 | 28.289 | 456 | 281 | 17 | 111 | 537 | 646 | 1084 | 3.45e-48 | 181 |
| MS.gene011570.t1 | MTR_3g464550 | 26.444 | 450 | 284 | 15 | 122 | 544 | 585 | 1014 | 2.89e-45 | 172 |
| MS.gene011570.t1 | MTR_7g109640 | 28.894 | 398 | 233 | 12 | 144 | 510 | 383 | 761 | 2.73e-42 | 162 |
| MS.gene011570.t1 | MTR_5g024500 | 26.932 | 427 | 268 | 11 | 145 | 537 | 3 | 419 | 2.99e-40 | 151 |
| MS.gene011570.t1 | MTR_5g024390 | 26.698 | 427 | 269 | 11 | 145 | 537 | 3 | 419 | 2.28e-39 | 149 |
| MS.gene011570.t1 | MTR_7g095140 | 28.435 | 313 | 202 | 8 | 250 | 553 | 17 | 316 | 7.17e-33 | 129 |
| MS.gene011570.t1 | MTR_3g103120 | 23.467 | 473 | 300 | 14 | 105 | 537 | 382 | 832 | 1.23e-32 | 133 |
| MS.gene011570.t1 | MTR_3g103110 | 28.076 | 317 | 196 | 9 | 239 | 537 | 489 | 791 | 6.50e-32 | 131 |
| MS.gene011570.t1 | MTR_1g068930 | 24.153 | 443 | 235 | 15 | 155 | 527 | 435 | 846 | 1.24e-27 | 118 |
| MS.gene011570.t1 | MTR_1g068930 | 24.153 | 443 | 235 | 15 | 155 | 527 | 472 | 883 | 1.46e-27 | 118 |
| MS.gene011570.t1 | MTR_1g062330 | 23.696 | 460 | 255 | 13 | 155 | 537 | 362 | 802 | 3.92e-27 | 116 |
| MS.gene011570.t1 | MTR_7g102610 | 22.273 | 440 | 241 | 14 | 155 | 515 | 507 | 924 | 4.53e-26 | 113 |
| MS.gene011570.t1 | MTR_4g056990 | 24.390 | 451 | 254 | 16 | 155 | 543 | 200 | 625 | 5.77e-25 | 109 |
| MS.gene011570.t1 | MTR_4g050090 | 22.961 | 466 | 252 | 15 | 155 | 537 | 200 | 641 | 3.49e-23 | 104 |
| MS.gene011570.t1 | MTR_3g103160 | 32.317 | 164 | 108 | 2 | 375 | 537 | 275 | 436 | 3.49e-20 | 94.0 |
| MS.gene011570.t1 | MTR_4g057290 | 22.756 | 479 | 249 | 17 | 124 | 511 | 66 | 514 | 7.78e-19 | 90.5 |
| MS.gene011570.t1 | MTR_2g084425 | 25.714 | 175 | 125 | 2 | 364 | 535 | 844 | 1016 | 3.69e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011570.t1 | AT5G36740 | 33.787 | 441 | 257 | 10 | 124 | 538 | 519 | 950 | 5.14e-69 | 241 |
| MS.gene011570.t1 | AT5G36740 | 33.787 | 441 | 257 | 10 | 124 | 538 | 519 | 950 | 5.14e-69 | 241 |
| MS.gene011570.t1 | AT4G14920 | 34.917 | 421 | 237 | 11 | 142 | 538 | 577 | 984 | 1.88e-68 | 239 |
| MS.gene011570.t1 | AT4G14920 | 34.917 | 421 | 237 | 11 | 142 | 538 | 577 | 984 | 1.89e-68 | 239 |
| MS.gene011570.t1 | AT4G14920 | 34.917 | 421 | 237 | 11 | 142 | 538 | 577 | 984 | 1.89e-68 | 239 |
| MS.gene011570.t1 | AT5G36740 | 33.879 | 428 | 243 | 10 | 142 | 538 | 389 | 807 | 2.76e-68 | 238 |
| MS.gene011570.t1 | AT1G05380 | 32.791 | 430 | 244 | 12 | 142 | 542 | 517 | 930 | 7.77e-66 | 232 |
| MS.gene011570.t1 | AT1G05380 | 32.791 | 430 | 244 | 12 | 142 | 542 | 517 | 930 | 7.77e-66 | 232 |
| MS.gene011570.t1 | AT1G05380 | 32.791 | 430 | 244 | 12 | 142 | 542 | 517 | 930 | 7.77e-66 | 232 |
| MS.gene011570.t1 | AT5G36670 | 31.510 | 457 | 260 | 12 | 124 | 538 | 519 | 964 | 7.92e-59 | 212 |
| MS.gene011570.t1 | AT5G36670 | 31.510 | 457 | 260 | 12 | 124 | 538 | 519 | 964 | 7.92e-59 | 212 |
| MS.gene011570.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 574 | 978 | 3.55e-58 | 210 |
| MS.gene011570.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 4.47e-58 | 210 |
| MS.gene011570.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 4.47e-58 | 210 |
| MS.gene011570.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 4.47e-58 | 210 |
| MS.gene011570.t1 | AT5G36670 | 31.532 | 444 | 246 | 12 | 142 | 538 | 389 | 821 | 7.62e-58 | 209 |
| MS.gene011570.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 1.04e-57 | 208 |
| MS.gene011570.t1 | AT5G36670 | 31.049 | 467 | 259 | 13 | 124 | 538 | 519 | 974 | 1.80e-57 | 208 |
| MS.gene011570.t1 | AT5G36740 | 32.461 | 382 | 224 | 9 | 124 | 479 | 519 | 892 | 2.86e-52 | 192 |
| MS.gene011570.t1 | AT5G36740 | 32.461 | 382 | 224 | 9 | 124 | 479 | 519 | 892 | 2.86e-52 | 192 |
| MS.gene011570.t1 | AT5G36670 | 32.461 | 382 | 224 | 9 | 124 | 479 | 519 | 892 | 2.86e-52 | 192 |
| MS.gene011570.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 362 | 778 | 2.91e-40 | 156 |
| MS.gene011570.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 584 | 1000 | 3.74e-40 | 156 |
| MS.gene011570.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 4.23e-40 | 156 |
| MS.gene011570.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 4.23e-40 | 156 |
| MS.gene011570.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 584 | 1000 | 4.65e-40 | 156 |
| MS.gene011570.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 4.76e-40 | 156 |
| MS.gene011570.t1 | AT5G58610 | 26.303 | 422 | 258 | 13 | 139 | 538 | 584 | 974 | 3.81e-37 | 147 |
| MS.gene011570.t1 | AT5G58610 | 26.303 | 422 | 258 | 13 | 139 | 538 | 584 | 974 | 5.19e-37 | 147 |
| MS.gene011570.t1 | AT3G14980 | 31.003 | 329 | 190 | 13 | 143 | 447 | 619 | 934 | 1.09e-34 | 140 |
| MS.gene011570.t1 | AT3G53680 | 24.169 | 451 | 252 | 15 | 155 | 537 | 403 | 831 | 1.25e-31 | 130 |
| MS.gene011570.t1 | AT5G58610 | 27.513 | 378 | 228 | 13 | 139 | 484 | 593 | 956 | 1.25e-31 | 130 |
| MS.gene011570.t1 | AT3G53680 | 24.169 | 451 | 252 | 15 | 155 | 537 | 405 | 833 | 1.35e-31 | 130 |
| MS.gene011570.t1 | AT5G58610 | 27.513 | 378 | 228 | 13 | 139 | 484 | 584 | 947 | 1.90e-31 | 130 |
| MS.gene011570.t1 | AT2G37520 | 23.516 | 455 | 251 | 14 | 155 | 537 | 386 | 815 | 3.82e-31 | 129 |
| MS.gene011570.t1 | AT2G27980 | 24.301 | 465 | 250 | 15 | 155 | 537 | 613 | 1057 | 2.82e-29 | 123 |
| MS.gene011570.t1 | AT2G36720 | 24.078 | 461 | 248 | 16 | 155 | 535 | 533 | 971 | 9.62e-29 | 122 |
| MS.gene011570.t1 | AT2G36720 | 24.078 | 461 | 248 | 16 | 155 | 535 | 533 | 971 | 9.62e-29 | 122 |
| MS.gene011570.t1 | AT5G58610 | 26.765 | 340 | 203 | 13 | 139 | 446 | 584 | 909 | 3.85e-23 | 104 |
| MS.gene011570.t1 | AT5G63900 | 25.424 | 295 | 205 | 8 | 246 | 537 | 258 | 540 | 2.39e-21 | 98.2 |
Find 119 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCCATTGATATTATTT+TGG | 0.141230 | 8.4:-23475737 | None:intergenic |
| ACGAATTTGCCATTTATTAA+TGG | 0.153548 | 8.4:+23476608 | MS.gene011570:CDS |
| TCACTTATTTCCACATAATT+TGG | 0.186213 | 8.4:-23474398 | None:intergenic |
| TCCCAGAAATTACCTATTTC+AGG | 0.195115 | 8.4:-23474518 | None:intergenic |
| GACCTGAAATAGGTAATTTC+TGG | 0.234540 | 8.4:+23474516 | MS.gene011570:CDS |
| CAATTATCTCCATTAATAAA+TGG | 0.245597 | 8.4:-23476617 | None:intergenic |
| CTTTCAACCATTTACTAATC+AGG | 0.274878 | 8.4:-23475027 | None:intergenic |
| ATTTACTAATCAGGATGTTT+TGG | 0.283205 | 8.4:-23475018 | None:intergenic |
| TTGAAAATTCGACCGGTTAT+CGG | 0.303297 | 8.4:-23474872 | None:intergenic |
| AAAACATCCTGATTAGTAAA+TGG | 0.312020 | 8.4:+23475020 | MS.gene011570:CDS |
| TCCGGATTAATACTCGTTTC+CGG | 0.320410 | 8.4:-23474614 | None:intergenic |
| TCAACAGTTTGTGGATTAGA+TGG | 0.321798 | 8.4:-23477001 | None:intergenic |
| TGCTTCTAATTGACAGTATT+AGG | 0.322640 | 8.4:-23477175 | None:intergenic |
| CCTTGACTCTACAGATTTCA+TGG | 0.325979 | 8.4:+23476531 | MS.gene011570:intron |
| TGGACTTGAATGAGCCATTC+GGG | 0.341319 | 8.4:+23477143 | MS.gene011570:CDS |
| TCCATTGGCAAACTTTGTTC+CGG | 0.346997 | 8.4:-23474632 | None:intergenic |
| TTGAAGGGTTAGAAGCAAAC+TGG | 0.364828 | 8.4:+23474447 | MS.gene011570:CDS |
| CTTGTTTCGTTCATTGATGA+TGG | 0.366832 | 8.4:-23474662 | None:intergenic |
| AAATTACCTATTTCAGGTCT+TGG | 0.368746 | 8.4:-23474512 | None:intergenic |
| CGTAGACCAAGACCTGAAAT+AGG | 0.369525 | 8.4:+23474506 | MS.gene011570:CDS |
| TAAACAAACAATGTCATGTA+TGG | 0.389738 | 8.4:-23475089 | None:intergenic |
| GCATACCTCTTTACAACTTA+CGG | 0.394078 | 8.4:-23475597 | None:intergenic |
| TGCAGCTGCTTGCATGTTGA+TGG | 0.397741 | 8.4:+23475836 | MS.gene011570:CDS |
| GCAACCATACAAACGCATTT+CGG | 0.399165 | 8.4:+23474973 | MS.gene011570:CDS |
| GTTTGTTTAGTTTGTGGAAA+AGG | 0.400119 | 8.4:+23475103 | MS.gene011570:CDS |
| TGAAATAGCTACCATTGTTC+CGG | 0.403012 | 8.4:+23474595 | MS.gene011570:CDS |
| CTGGACTTGAATGAGCCATT+CGG | 0.408126 | 8.4:+23477142 | MS.gene011570:CDS |
| GCTATTTCATTCACCGATGA+TGG | 0.410514 | 8.4:-23474581 | None:intergenic |
| TCAACAAACAAGTCATAATC+TGG | 0.410645 | 8.4:+23474691 | MS.gene011570:CDS |
| ATGGGAATGAGAGGTATTCT+TGG | 0.411367 | 8.4:+23475751 | MS.gene011570:CDS |
| TACACTGCTTGTTGCATTGG+CGG | 0.412327 | 8.4:-23475403 | None:intergenic |
| ACTTACACTGCTTGTTGCAT+TGG | 0.420126 | 8.4:-23475406 | None:intergenic |
| GACATTGTTTGTTTAGTTTG+TGG | 0.426333 | 8.4:+23475097 | MS.gene011570:CDS |
| CTGCAAGTGCAAATACTGTA+AGG | 0.426643 | 8.4:+23475343 | MS.gene011570:CDS |
| GGAATCCAAAATAATATCAA+TGG | 0.427814 | 8.4:+23475732 | MS.gene011570:CDS |
| GAAGTCCCCGCTGTTGCGCT+TGG | 0.436355 | 8.4:-23474740 | None:intergenic |
| AAAGATTGATGAGAAATTGA+AGG | 0.437819 | 8.4:+23475701 | MS.gene011570:intron |
| GAGAAATTGAAGGGATCAAT+CGG | 0.439072 | 8.4:+23475711 | MS.gene011570:CDS |
| ACCTGAAATAGGTAATTTCT+GGG | 0.445985 | 8.4:+23474517 | MS.gene011570:CDS |
| ATTAATGGAGATAATTGAAT+CGG | 0.450680 | 8.4:+23476623 | MS.gene011570:CDS |
| ATGTTGATGGAAGAAGCTTT+TGG | 0.456514 | 8.4:+23475849 | MS.gene011570:CDS |
| TTGCTTAATCGTATAGCTCC+GGG | 0.462605 | 8.4:-23477109 | None:intergenic |
| CTCAGGAAAACGACAACCAT+TGG | 0.462642 | 8.4:+23475309 | MS.gene011570:CDS |
| GAAACTCCAAGCGCAACAGC+GGG | 0.464068 | 8.4:+23474734 | MS.gene011570:CDS |
| TTGGAGAGTCCTCCAACAAA+TGG | 0.464964 | 8.4:+23475770 | MS.gene011570:CDS |
| TTTGCTTAATCGTATAGCTC+CGG | 0.467808 | 8.4:-23477110 | None:intergenic |
| ATTAAGCAAAAGACTTCTGC+TGG | 0.470296 | 8.4:+23477123 | MS.gene011570:CDS |
| GCCACCGAAATGCGTTTGTA+TGG | 0.477551 | 8.4:-23474977 | None:intergenic |
| TTCCACATTTCAACAGTTTG+TGG | 0.481433 | 8.4:-23477010 | None:intergenic |
| TTCGAAGTCTTGAAGTTGAA+AGG | 0.481443 | 8.4:+23476969 | MS.gene011570:CDS |
| TGAAGATGGCATATACTTTG+AGG | 0.486004 | 8.4:+23474363 | None:intergenic |
| AGAAACTCCAAGCGCAACAG+CGG | 0.487445 | 8.4:+23474733 | MS.gene011570:CDS |
| CCGAGGTGCGTTACCATGAT+GGG | 0.489289 | 8.4:+23474843 | MS.gene011570:CDS |
| GAATCCAAAATAATATCAAT+GGG | 0.493433 | 8.4:+23475733 | MS.gene011570:CDS |
| TTGTTCCGTAAGTTGTAAAG+AGG | 0.493762 | 8.4:+23475592 | MS.gene011570:CDS |
| ACCGAGGTGCGTTACCATGA+TGG | 0.496123 | 8.4:+23474842 | MS.gene011570:CDS |
| TAGCTCCGGGGAACATCAAA+AGG | 0.501144 | 8.4:-23477096 | None:intergenic |
| ATGATAACAGACACACATAC+TGG | 0.502452 | 8.4:+23475873 | MS.gene011570:CDS |
| TGGAAAAGGAGAAGATGAAG+GGG | 0.508556 | 8.4:+23475117 | MS.gene011570:CDS |
| TCCGGAAACGAGTATTAATC+CGG | 0.511461 | 8.4:+23474613 | MS.gene011570:CDS |
| GAAGATGGCATATACTTTGA+GGG | 0.519625 | 8.4:+23474364 | None:intergenic |
| TGTGGAAAAGGAGAAGATGA+AGG | 0.530192 | 8.4:+23475115 | MS.gene011570:CDS |
| TCCGGAACAAAGTTTGCCAA+TGG | 0.531404 | 8.4:+23474631 | MS.gene011570:CDS |
| AAGATTGATGAGAAATTGAA+GGG | 0.532048 | 8.4:+23475702 | MS.gene011570:intron |
| AGCACAAGAACGGTGATAAG+TGG | 0.533107 | 8.4:-23475167 | None:intergenic |
| GAAAGTGAGTCAAATATTGA+AGG | 0.536289 | 8.4:+23474431 | MS.gene011570:CDS |
| GTCGCAACAGCTACATAAGA+TGG | 0.537125 | 8.4:-23474900 | None:intergenic |
| GGCTCCATTGAAAATTCGAC+CGG | 0.537301 | 8.4:-23474879 | None:intergenic |
| GATGATGGAACTGTTTCCAT+TGG | 0.538815 | 8.4:-23474647 | None:intergenic |
| AACTGAAACACCTCCATCAT+CGG | 0.540100 | 8.4:+23474568 | MS.gene011570:CDS |
| AGTTGTCAACCATGCTAGGA+TGG | 0.543516 | 8.4:-23474798 | None:intergenic |
| CTTGACTCTACAGATTTCAT+GGG | 0.545472 | 8.4:+23476532 | MS.gene011570:intron |
| GACCGTCGACCTCGTCGACC+TGG | 0.547724 | 8.4:-23474476 | None:intergenic |
| CTGTAAGGGTGATGATGAAG+AGG | 0.550087 | 8.4:+23475358 | MS.gene011570:CDS |
| TGGCGGCACATGATGTCTAA+AGG | 0.550630 | 8.4:-23475386 | None:intergenic |
| ACTTGCAAGGAAATTGATGA+AGG | 0.553512 | 8.4:+23474818 | MS.gene011570:CDS |
| GCCTCATCTGTGGCAATGAA+AGG | 0.555749 | 8.4:-23476573 | None:intergenic |
| TGCAAGTTGTCAACCATGCT+AGG | 0.558541 | 8.4:-23474802 | None:intergenic |
| GCCTTTCATTGCCACAGATG+AGG | 0.563244 | 8.4:+23476572 | MS.gene011570:CDS |
| CCCATCATGGTAACGCACCT+CGG | 0.563559 | 8.4:-23474843 | None:intergenic |
| GATTAGTAAATGGTTGAAAG+AGG | 0.563585 | 8.4:+23475030 | MS.gene011570:CDS |
| AAACAAACAATGTCATGTAT+GGG | 0.563802 | 8.4:-23475088 | None:intergenic |
| TTATGTAATAAGCAATTCAA+AGG | 0.566767 | 8.4:+23475812 | MS.gene011570:CDS |
| ACGCACAAGACCAAATTATG+TGG | 0.574274 | 8.4:+23474388 | MS.gene011570:CDS |
| ATAATATCAATGGGAATGAG+AGG | 0.575607 | 8.4:+23475742 | MS.gene011570:CDS |
| AGTTTGTGGATTAGATGGAA+TGG | 0.581324 | 8.4:-23476996 | None:intergenic |
| GCCTCTGTATGCCTCATCTG+TGG | 0.584277 | 8.4:-23476583 | None:intergenic |
| ATCCACAAACTGTTGAAATG+TGG | 0.588515 | 8.4:+23477008 | MS.gene011570:CDS |
| GCGACGAGGAAATCTCTGTA+TGG | 0.591878 | 8.4:+23474918 | MS.gene011570:CDS |
| GTGGAAAAGGAGAAGATGAA+GGG | 0.593089 | 8.4:+23475116 | MS.gene011570:CDS |
| TGAAGGGTTAGAAGCAAACT+GGG | 0.594789 | 8.4:+23474448 | MS.gene011570:CDS |
| AAAGTGAGTCAAATATTGAA+GGG | 0.601009 | 8.4:+23474432 | MS.gene011570:CDS |
| ACCATACAAACGCATTTCGG+TGG | 0.602664 | 8.4:+23474976 | MS.gene011570:CDS |
| AATACTCGTTTCCGGAACAA+TGG | 0.603556 | 8.4:-23474606 | None:intergenic |
| TAATTGCTGCAGCTACCGTA+AGG | 0.611328 | 8.4:+23476360 | MS.gene011570:CDS |
| TGCTTAGATCAAATCTGAGG+AGG | 0.617602 | 8.4:+23476288 | MS.gene011570:intron |
| CCTGTATAAAAGCACAAGAA+CGG | 0.617850 | 8.4:-23475177 | None:intergenic |
| ACAAGAACGGTGATAAGTGG+AGG | 0.625049 | 8.4:-23475164 | None:intergenic |
| AGCATGGTTGACAACTTGCA+AGG | 0.627667 | 8.4:+23474805 | MS.gene011570:CDS |
| TGCAAGTGCAAATACTGTAA+GGG | 0.630487 | 8.4:+23475344 | MS.gene011570:CDS |
| ATTTCATTCACCGATGATGG+AGG | 0.630618 | 8.4:-23474578 | None:intergenic |
| AACCAGGTCGACGAGGTCGA+CGG | 0.633162 | 8.4:+23474474 | MS.gene011570:CDS |
| TGCAGTAAGAACATAACCAA+TGG | 0.637831 | 8.4:-23475325 | None:intergenic |
| AATTGCTTAGATCAAATCTG+AGG | 0.638264 | 8.4:+23476285 | MS.gene011570:intron |
| AACGCATTTCGGTGGCAAAG+CGG | 0.641653 | 8.4:+23474984 | MS.gene011570:CDS |
| CGAGGTGCGTTACCATGATG+GGG | 0.652213 | 8.4:+23474844 | MS.gene011570:CDS |
| CTTGCAAGGAAATTGATGAA+GGG | 0.653849 | 8.4:+23474819 | MS.gene011570:CDS |
| ACAAATGGATACGAAAAGTG+AGG | 0.660093 | 8.4:+23475785 | MS.gene011570:CDS |
| TTAGGCTCAACATCCCCGAA+TGG | 0.660828 | 8.4:-23477157 | None:intergenic |
| CACACATACTGGCGTCAATG+TGG | 0.663750 | 8.4:+23475884 | MS.gene011570:CDS |
| CTTATGTAGCTGTTGCGACG+AGG | 0.663870 | 8.4:+23474904 | MS.gene011570:CDS |
| GGAAAAGGAGAAGATGAAGG+GGG | 0.669030 | 8.4:+23475118 | MS.gene011570:CDS |
| CAAGAACGGTGATAAGTGGA+GGG | 0.669312 | 8.4:-23475163 | None:intergenic |
| GCCACAGATGAGGCATACAG+AGG | 0.671197 | 8.4:+23476582 | MS.gene011570:CDS |
| AGAGTGTTCTATACAACCGC+AGG | 0.671533 | 8.4:+23475910 | MS.gene011570:CDS |
| TGCTTAATCGTATAGCTCCG+GGG | 0.678737 | 8.4:-23477108 | None:intergenic |
| GGAAATTGATGAAGGGACCG+AGG | 0.685280 | 8.4:+23474826 | MS.gene011570:CDS |
| GGACTTGAATGAGCCATTCG+GGG | 0.733150 | 8.4:+23477144 | MS.gene011570:CDS |
| AAACTCCAAGCGCAACAGCG+GGG | 0.743032 | 8.4:+23474735 | MS.gene011570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTGAAATTTTATTTTTTTT+TGG | - | chr8.4:23476247-23476266 | None:intergenic | 10.0% |
| !!! | TTTTTATAATGTTTTATTTC+TGG | - | chr8.4:23474776-23474795 | None:intergenic | 10.0% |
| !! | AAACTGAAAAAGATTTATTA+AGG | + | chr8.4:23475564-23475583 | MS.gene011570:CDS | 15.0% |
| !!! | AATAATTTGTTATTTCTTCA+CGG | + | chr8.4:23476449-23476468 | MS.gene011570:intron | 15.0% |
| !!! | AATTTAATTCACTTGTTTTA+AGG | + | chr8.4:23476881-23476900 | MS.gene011570:intron | 15.0% |
| !! | AATCAAATACATGATATTTG+TGG | + | chr8.4:23475663-23475682 | MS.gene011570:intron | 20.0% |
| !! | ATCAAATACATGATATTTGT+GGG | + | chr8.4:23475664-23475683 | MS.gene011570:intron | 20.0% |
| !! | ATTAATGGAGATAATTGAAT+CGG | + | chr8.4:23476623-23476642 | MS.gene011570:CDS | 20.0% |
| !! | CAATTATCTCCATTAATAAA+TGG | - | chr8.4:23476620-23476639 | None:intergenic | 20.0% |
| !! | GAATCCAAAATAATATCAAT+GGG | + | chr8.4:23475733-23475752 | MS.gene011570:CDS | 20.0% |
| !! | TGGTAAAAAATATATTTGGT+TGG | - | chr8.4:23475995-23476014 | None:intergenic | 20.0% |
| !! | TTATGTAATAAGCAATTCAA+AGG | + | chr8.4:23475812-23475831 | MS.gene011570:CDS | 20.0% |
| !!! | ACTTTAGATTAAAAGAGTAT+CGG | + | chr8.4:23476050-23476069 | MS.gene011570:intron | 20.0% |
| !!! | AGTTTACAAAATGATTTTGT+AGG | + | chr8.4:23475521-23475540 | MS.gene011570:intron | 20.0% |
| !!! | ATAATTTGTTATTTCTTCAC+GGG | + | chr8.4:23476450-23476469 | MS.gene011570:intron | 20.0% |
| !!! | CTTTTTCAACTATTTTGTTT+TGG | + | chr8.4:23476408-23476427 | MS.gene011570:intron | 20.0% |
| ! | AAAACATCCTGATTAGTAAA+TGG | + | chr8.4:23475020-23475039 | MS.gene011570:CDS | 25.0% |
| ! | AAACAAACAATGTCATGTAT+GGG | - | chr8.4:23475091-23475110 | None:intergenic | 25.0% |
| ! | AAAGATTGATGAGAAATTGA+AGG | + | chr8.4:23475701-23475720 | MS.gene011570:intron | 25.0% |
| ! | AAAGTGAGTCAAATATTGAA+GGG | + | chr8.4:23474432-23474451 | MS.gene011570:CDS | 25.0% |
| ! | AAGATTGATGAGAAATTGAA+GGG | + | chr8.4:23475702-23475721 | MS.gene011570:intron | 25.0% |
| ! | AATTAAGTTCAATGGAAAAG+TGG | - | chr8.4:23476832-23476851 | None:intergenic | 25.0% |
| ! | AGATTTGATCTAAGCAATTA+AGG | - | chr8.4:23476284-23476303 | None:intergenic | 25.0% |
| ! | ATGAATGCAATTAAGTTCAA+TGG | - | chr8.4:23476840-23476859 | None:intergenic | 25.0% |
| ! | GCAGTGGTAAAAAATATATT+TGG | - | chr8.4:23475999-23476018 | None:intergenic | 25.0% |
| ! | GGAATCCAAAATAATATCAA+TGG | + | chr8.4:23475732-23475751 | MS.gene011570:CDS | 25.0% |
| ! | TAAACAAACAATGTCATGTA+TGG | - | chr8.4:23475092-23475111 | None:intergenic | 25.0% |
| ! | TCACTTATTTCCACATAATT+TGG | - | chr8.4:23474401-23474420 | None:intergenic | 25.0% |
| !! | AAAAATATATTTGGTTGGTG+CGG | - | chr8.4:23475990-23476009 | None:intergenic | 25.0% |
| !! | AAAATGATTTTGTAGGTCAT+TGG | + | chr8.4:23475528-23475547 | MS.gene011570:intron | 25.0% |
| !! | ACGAATTTGCCATTTATTAA+TGG | + | chr8.4:23476608-23476627 | MS.gene011570:CDS | 25.0% |
| !! | ATTTACTAATCAGGATGTTT+TGG | - | chr8.4:23475021-23475040 | None:intergenic | 25.0% |
| !! | CATTCCCATTGATATTATTT+TGG | - | chr8.4:23475740-23475759 | None:intergenic | 25.0% |
| !! | TAATCTAAAGTGTCATTACA+TGG | - | chr8.4:23476041-23476060 | None:intergenic | 25.0% |
| !! | TTTTCTTTTGCTTACATGAA+GGG | + | chr8.4:23475221-23475240 | MS.gene011570:intron | 25.0% |
| !! | TTTTTCTTTTGCTTACATGA+AGG | + | chr8.4:23475220-23475239 | MS.gene011570:intron | 25.0% |
| !!! | CAACTATTTTGTTTTGGTTA+TGG | + | chr8.4:23476414-23476433 | MS.gene011570:intron | 25.0% |
| !!! | CTTTAGATTAAAAGAGTATC+GGG | + | chr8.4:23476051-23476070 | MS.gene011570:intron | 25.0% |
| !!! | CTTTTCATTTTTATACTGCA+GGG | + | chr8.4:23475281-23475300 | MS.gene011570:intron | 25.0% |
| !!! | GTTGAAAAAGTATCAACAAT+TGG | - | chr8.4:23476398-23476417 | None:intergenic | 25.0% |
| !!! | TCTTTTCATTTTTATACTGC+AGG | + | chr8.4:23475280-23475299 | MS.gene011570:intron | 25.0% |
| !!! | TGCATATCACATTTTGAAAA+TGG | - | chr8.4:23476717-23476736 | None:intergenic | 25.0% |
| AAGTATCAACAATTGGAAAG+AGG | - | chr8.4:23476391-23476410 | None:intergenic | 30.0% | |
| AATTGCTTAGATCAAATCTG+AGG | + | chr8.4:23476285-23476304 | MS.gene011570:intron | 30.0% | |
| ACCTGAAATAGGTAATTTCT+GGG | + | chr8.4:23474517-23474536 | MS.gene011570:CDS | 30.0% | |
| AGTTATGGTCATGAAAACAA+AGG | - | chr8.4:23475492-23475511 | None:intergenic | 30.0% | |
| ATAAAAAAACCATCCTAGCA+TGG | + | chr8.4:23474789-23474808 | MS.gene011570:CDS | 30.0% | |
| ATAATATCAATGGGAATGAG+AGG | + | chr8.4:23475742-23475761 | MS.gene011570:CDS | 30.0% | |
| ATACAACATGCATGAGATAT+AGG | - | chr8.4:23476666-23476685 | None:intergenic | 30.0% | |
| CTTTCAACCATTTACTAATC+AGG | - | chr8.4:23475030-23475049 | None:intergenic | 30.0% | |
| GAAAGTGAGTCAAATATTGA+AGG | + | chr8.4:23474431-23474450 | MS.gene011570:CDS | 30.0% | |
| GATTAGTAAATGGTTGAAAG+AGG | + | chr8.4:23475030-23475049 | MS.gene011570:CDS | 30.0% | |
| GCAAAAATATAACTTCAGTG+AGG | + | chr8.4:23477033-23477052 | MS.gene011570:CDS | 30.0% | |
| TAAACTACTTCAGTGAGTTA+TGG | - | chr8.4:23475507-23475526 | None:intergenic | 30.0% | |
| TCAACAAACAAGTCATAATC+TGG | + | chr8.4:23474691-23474710 | MS.gene011570:CDS | 30.0% | |
| TTGAAATATCAGATGATGAC+CGG | - | chr8.4:23475437-23475456 | None:intergenic | 30.0% | |
| ! | AAATTACCTATTTCAGGTCT+TGG | - | chr8.4:23474515-23474534 | None:intergenic | 30.0% |
| !! | GACATTGTTTGTTTAGTTTG+TGG | + | chr8.4:23475097-23475116 | MS.gene011570:CDS | 30.0% |
| !! | GTTTGTTTAGTTTGTGGAAA+AGG | + | chr8.4:23475103-23475122 | MS.gene011570:CDS | 30.0% |
| !!! | GTATGCATTCATTTTTTCTG+TGG | + | chr8.4:23475614-23475633 | MS.gene011570:intron | 30.0% |
| AAGAGGATGAACAAAAACGT+CGG | + | chr8.4:23475047-23475066 | MS.gene011570:CDS | 35.0% | |
| AAGTTCAATGGAAAAGTGGA+AGG | - | chr8.4:23476828-23476847 | None:intergenic | 35.0% | |
| ACAAATGGATACGAAAAGTG+AGG | + | chr8.4:23475785-23475804 | MS.gene011570:CDS | 35.0% | |
| ACATATCTCTCTCTTCTACA+AGG | - | chr8.4:23476795-23476814 | None:intergenic | 35.0% | |
| ACTTGCAAGGAAATTGATGA+AGG | + | chr8.4:23474818-23474837 | MS.gene011570:CDS | 35.0% | |
| ATAGTGAGTGATAAATGCAG+TGG | - | chr8.4:23476015-23476034 | None:intergenic | 35.0% | |
| ATCCACAAACTGTTGAAATG+TGG | + | chr8.4:23477008-23477027 | MS.gene011570:CDS | 35.0% | |
| ATGATAACAGACACACATAC+TGG | + | chr8.4:23475873-23475892 | MS.gene011570:CDS | 35.0% | |
| ATTAAGCAAAAGACTTCTGC+TGG | + | chr8.4:23477123-23477142 | MS.gene011570:CDS | 35.0% | |
| CTTGACTCTACAGATTTCAT+GGG | + | chr8.4:23476532-23476551 | MS.gene011570:intron | 35.0% | |
| CTTGCAAGGAAATTGATGAA+GGG | + | chr8.4:23474819-23474838 | MS.gene011570:CDS | 35.0% | |
| CTTGTTTCGTTCATTGATGA+TGG | - | chr8.4:23474665-23474684 | None:intergenic | 35.0% | |
| GACCTGAAATAGGTAATTTC+TGG | + | chr8.4:23474516-23474535 | MS.gene011570:CDS | 35.0% | |
| GAGAAATTGAAGGGATCAAT+CGG | + | chr8.4:23475711-23475730 | MS.gene011570:CDS | 35.0% | |
| GCATACCTCTTTACAACTTA+CGG | - | chr8.4:23475600-23475619 | None:intergenic | 35.0% | |
| TATGGTCATGAAAACAAAGG+AGG | - | chr8.4:23475489-23475508 | None:intergenic | 35.0% | |
| TCCCAGAAATTACCTATTTC+AGG | - | chr8.4:23474521-23474540 | None:intergenic | 35.0% | |
| TGAAATAGCTACCATTGTTC+CGG | + | chr8.4:23474595-23474614 | MS.gene011570:CDS | 35.0% | |
| TGCAAGTGCAAATACTGTAA+GGG | + | chr8.4:23475344-23475363 | MS.gene011570:CDS | 35.0% | |
| TGCAGTAAGAACATAACCAA+TGG | - | chr8.4:23475328-23475347 | None:intergenic | 35.0% | |
| TTCCACATTTCAACAGTTTG+TGG | - | chr8.4:23477013-23477032 | None:intergenic | 35.0% | |
| TTCGAAGTCTTGAAGTTGAA+AGG | + | chr8.4:23476969-23476988 | MS.gene011570:CDS | 35.0% | |
| TTGAAAATTCGACCGGTTAT+CGG | - | chr8.4:23474875-23474894 | None:intergenic | 35.0% | |
| TTGTTCCGTAAGTTGTAAAG+AGG | + | chr8.4:23475592-23475611 | MS.gene011570:CDS | 35.0% | |
| TTTGCTTAATCGTATAGCTC+CGG | - | chr8.4:23477113-23477132 | None:intergenic | 35.0% | |
| ! | ATAACCGGTCGAATTTTCAA+TGG | + | chr8.4:23474875-23474894 | MS.gene011570:CDS | 35.0% |
| ! | CACTTTTCGTATCCATTTGT+TGG | - | chr8.4:23475785-23475804 | None:intergenic | 35.0% |
| ! | CCTGTATAAAAGCACAAGAA+CGG | - | chr8.4:23475180-23475199 | None:intergenic | 35.0% |
| ! | TATAACCTTTTGATGTTCCC+CGG | + | chr8.4:23477091-23477110 | MS.gene011570:CDS | 35.0% |
| !! | AATTAAGAAGTGCTTACCTG+CGG | - | chr8.4:23475929-23475948 | None:intergenic | 35.0% |
| !! | AGTTTGTGGATTAGATGGAA+TGG | - | chr8.4:23476999-23477018 | None:intergenic | 35.0% |
| !! | ATGTTGATGGAAGAAGCTTT+TGG | + | chr8.4:23475849-23475868 | MS.gene011570:CDS | 35.0% |
| !! | TACTAATCAGGATGTTTTGG+AGG | - | chr8.4:23475018-23475037 | None:intergenic | 35.0% |
| !! | TCAACAGTTTGTGGATTAGA+TGG | - | chr8.4:23477004-23477023 | None:intergenic | 35.0% |
| !! | TGTTGATGGAAGAAGCTTTT+GGG | + | chr8.4:23475850-23475869 | MS.gene011570:CDS | 35.0% |
| !! | TTTTCGTATCCATTTGTTGG+AGG | - | chr8.4:23475782-23475801 | None:intergenic | 35.0% |
| AACTGAAACACCTCCATCAT+CGG | + | chr8.4:23474568-23474587 | MS.gene011570:CDS | 40.0% | |
| AATACTCGTTTCCGGAACAA+TGG | - | chr8.4:23474609-23474628 | None:intergenic | 40.0% | |
| ACGCACAAGACCAAATTATG+TGG | + | chr8.4:23474388-23474407 | MS.gene011570:CDS | 40.0% | |
| AGAGGATGAACAAAAACGTC+GGG | + | chr8.4:23475048-23475067 | MS.gene011570:CDS | 40.0% | |
| CCATGAAATCTGTAGAGTCA+AGG | - | chr8.4:23476534-23476553 | None:intergenic | 40.0% | |
| CCTTGACTCTACAGATTTCA+TGG | + | chr8.4:23476531-23476550 | MS.gene011570:intron | 40.0% | |
| CTGCAAGTGCAAATACTGTA+AGG | + | chr8.4:23475343-23475362 | MS.gene011570:CDS | 40.0% | |
| GCAACCATACAAACGCATTT+CGG | + | chr8.4:23474973-23474992 | MS.gene011570:CDS | 40.0% | |
| GTGGAAAAGGAGAAGATGAA+GGG | + | chr8.4:23475116-23475135 | MS.gene011570:CDS | 40.0% | |
| TCATGAAAACAAAGGAGGTG+AGG | - | chr8.4:23475484-23475503 | None:intergenic | 40.0% | |
| TCCATTGGCAAACTTTGTTC+CGG | - | chr8.4:23474635-23474654 | None:intergenic | 40.0% | |
| TCCGGAAACGAGTATTAATC+CGG | + | chr8.4:23474613-23474632 | MS.gene011570:CDS | 40.0% | |
| TCCGGATTAATACTCGTTTC+CGG | - | chr8.4:23474617-23474636 | None:intergenic | 40.0% | |
| TGAAGGGTTAGAAGCAAACT+GGG | + | chr8.4:23474448-23474467 | MS.gene011570:CDS | 40.0% | |
| TGCTTAGATCAAATCTGAGG+AGG | + | chr8.4:23476288-23476307 | MS.gene011570:intron | 40.0% | |
| TGGAAAAGGAGAAGATGAAG+GGG | + | chr8.4:23475117-23475136 | MS.gene011570:CDS | 40.0% | |
| TGGAAAGAGGACATACCTTA+CGG | - | chr8.4:23476378-23476397 | None:intergenic | 40.0% | |
| TGTGGAAAAGGAGAAGATGA+AGG | + | chr8.4:23475115-23475134 | MS.gene011570:CDS | 40.0% | |
| TTGAAGGGTTAGAAGCAAAC+TGG | + | chr8.4:23474447-23474466 | MS.gene011570:CDS | 40.0% | |
| TTGCTTAATCGTATAGCTCC+GGG | - | chr8.4:23477112-23477131 | None:intergenic | 40.0% | |
| ! | ACTTACACTGCTTGTTGCAT+TGG | - | chr8.4:23475409-23475428 | None:intergenic | 40.0% |
| ! | ATTTCATTCACCGATGATGG+AGG | - | chr8.4:23474581-23474600 | None:intergenic | 40.0% |
| ! | CAAGCAGTGTAAGTTTTCTC+CGG | + | chr8.4:23475415-23475434 | MS.gene011570:intron | 40.0% |
| ! | CCGTTCTTGTGCTTTTATAC+AGG | + | chr8.4:23475177-23475196 | MS.gene011570:CDS | 40.0% |
| ! | GCTATTTCATTCACCGATGA+TGG | - | chr8.4:23474584-23474603 | None:intergenic | 40.0% |
| ! | TATACTGCAGGGTTTTTCTC+AGG | + | chr8.4:23475292-23475311 | MS.gene011570:intron | 40.0% |
| !! | ATGGGAATGAGAGGTATTCT+TGG | + | chr8.4:23475751-23475770 | MS.gene011570:CDS | 40.0% |
| !! | CTCTTCTACAAGGAGTGTTA+TGG | - | chr8.4:23476785-23476804 | None:intergenic | 40.0% |
| !! | GATGATGGAACTGTTTCCAT+TGG | - | chr8.4:23474650-23474669 | None:intergenic | 40.0% |
| !!! | AATCAGGATGTTTTGGAGGA+AGG | - | chr8.4:23475014-23475033 | None:intergenic | 40.0% |
| !!! | TTATCGGTTTTTCCCCATCA+TGG | - | chr8.4:23474859-23474878 | None:intergenic | 40.0% |
| ACAAGAACGGTGATAAGTGG+AGG | - | chr8.4:23475167-23475186 | None:intergenic | 45.0% | |
| ACCATACAAACGCATTTCGG+TGG | + | chr8.4:23474976-23474995 | MS.gene011570:CDS | 45.0% | |
| AGCACAAGAACGGTGATAAG+TGG | - | chr8.4:23475170-23475189 | None:intergenic | 45.0% | |
| AGCATGGTTGACAACTTGCA+AGG | + | chr8.4:23474805-23474824 | MS.gene011570:CDS | 45.0% | |
| AGTTGTCAACCATGCTAGGA+TGG | - | chr8.4:23474801-23474820 | None:intergenic | 45.0% | |
| CAAGAACGGTGATAAGTGGA+GGG | - | chr8.4:23475166-23475185 | None:intergenic | 45.0% | |
| CGTAGACCAAGACCTGAAAT+AGG | + | chr8.4:23474506-23474525 | MS.gene011570:CDS | 45.0% | |
| CTCAGGAAAACGACAACCAT+TGG | + | chr8.4:23475309-23475328 | MS.gene011570:CDS | 45.0% | |
| CTGGACTTGAATGAGCCATT+CGG | + | chr8.4:23477142-23477161 | MS.gene011570:CDS | 45.0% | |
| GAAGCAAACTGGGAAAAACC+AGG | + | chr8.4:23474458-23474477 | MS.gene011570:CDS | 45.0% | |
| GATGGGGAAAAACCGATAAC+CGG | + | chr8.4:23474860-23474879 | MS.gene011570:CDS | 45.0% | |
| GGAAAAGGAGAAGATGAAGG+GGG | + | chr8.4:23475118-23475137 | MS.gene011570:CDS | 45.0% | |
| GGCTCCATTGAAAATTCGAC+CGG | - | chr8.4:23474882-23474901 | None:intergenic | 45.0% | |
| GTATCGGGTGTCTAACAAAG+TGG | + | chr8.4:23476066-23476085 | MS.gene011570:intron | 45.0% | |
| GTCGCAACAGCTACATAAGA+TGG | - | chr8.4:23474903-23474922 | None:intergenic | 45.0% | |
| TAATTGCTGCAGCTACCGTA+AGG | + | chr8.4:23476360-23476379 | MS.gene011570:CDS | 45.0% | |
| TCCGGAACAAAGTTTGCCAA+TGG | + | chr8.4:23474631-23474650 | MS.gene011570:CDS | 45.0% | |
| TGAAAACAAAGGAGGTGAGG+TGG | - | chr8.4:23475481-23475500 | None:intergenic | 45.0% | |
| TGCAAGTTGTCAACCATGCT+AGG | - | chr8.4:23474805-23474824 | None:intergenic | 45.0% | |
| TGCTTAATCGTATAGCTCCG+GGG | - | chr8.4:23477111-23477130 | None:intergenic | 45.0% | |
| TGGACTTGAATGAGCCATTC+GGG | + | chr8.4:23477143-23477162 | MS.gene011570:CDS | 45.0% | |
| TTGGAGAGTCCTCCAACAAA+TGG | + | chr8.4:23475770-23475789 | MS.gene011570:CDS | 45.0% | |
| ! | AGAGTGTTCTATACAACCGC+AGG | + | chr8.4:23475910-23475929 | MS.gene011570:CDS | 45.0% |
| ! | CTGTAAGGGTGATGATGAAG+AGG | + | chr8.4:23475358-23475377 | MS.gene011570:CDS | 45.0% |
| ! | TACACTGCTTGTTGCATTGG+CGG | - | chr8.4:23475406-23475425 | None:intergenic | 45.0% |
| ! | TATATTTGGTTGGTGCGGTG+CGG | - | chr8.4:23475985-23476004 | None:intergenic | 45.0% |
| !!! | TTGAAATTTTATTTTTTTTT+GGG | - | chr8.4:23476246-23476265 | None:intergenic | 5.0% |
| AACGCATTTCGGTGGCAAAG+CGG | + | chr8.4:23474984-23475003 | MS.gene011570:CDS | 50.0% | |
| AGAAACTCCAAGCGCAACAG+CGG | + | chr8.4:23474733-23474752 | MS.gene011570:CDS | 50.0% | |
| CACACATACTGGCGTCAATG+TGG | + | chr8.4:23475884-23475903 | MS.gene011570:CDS | 50.0% | |
| CTTATGTAGCTGTTGCGACG+AGG | + | chr8.4:23474904-23474923 | MS.gene011570:CDS | 50.0% | |
| GCCACCGAAATGCGTTTGTA+TGG | - | chr8.4:23474980-23474999 | None:intergenic | 50.0% | |
| GCCTCATCTGTGGCAATGAA+AGG | - | chr8.4:23476576-23476595 | None:intergenic | 50.0% | |
| GCCTTTCATTGCCACAGATG+AGG | + | chr8.4:23476572-23476591 | MS.gene011570:CDS | 50.0% | |
| GCGACGAGGAAATCTCTGTA+TGG | + | chr8.4:23474918-23474937 | MS.gene011570:CDS | 50.0% | |
| GGAAATTGATGAAGGGACCG+AGG | + | chr8.4:23474826-23474845 | MS.gene011570:CDS | 50.0% | |
| GGACTTGAATGAGCCATTCG+GGG | + | chr8.4:23477144-23477163 | MS.gene011570:CDS | 50.0% | |
| TAGCTCCGGGGAACATCAAA+AGG | - | chr8.4:23477099-23477118 | None:intergenic | 50.0% | |
| TCGGGTGTCTAACAAAGTGG+AGG | + | chr8.4:23476069-23476088 | MS.gene011570:intron | 50.0% | |
| TGCAGCTGCTTGCATGTTGA+TGG | + | chr8.4:23475836-23475855 | MS.gene011570:CDS | 50.0% | |
| TGGCGGCACATGATGTCTAA+AGG | - | chr8.4:23475389-23475408 | None:intergenic | 50.0% | |
| TTAGGCTCAACATCCCCGAA+TGG | - | chr8.4:23477160-23477179 | None:intergenic | 50.0% | |
| AAACTCCAAGCGCAACAGCG+GGG | + | chr8.4:23474735-23474754 | MS.gene011570:CDS | 55.0% | |
| ACCGAGGTGCGTTACCATGA+TGG | + | chr8.4:23474842-23474861 | MS.gene011570:CDS | 55.0% | |
| AGGAGGTGAGGTGGATGAGT+AGG | - | chr8.4:23475472-23475491 | None:intergenic | 55.0% | |
| CCGAGGTGCGTTACCATGAT+GGG | + | chr8.4:23474843-23474862 | MS.gene011570:CDS | 55.0% | |
| CGAGGTGCGTTACCATGATG+GGG | + | chr8.4:23474844-23474863 | MS.gene011570:CDS | 55.0% | |
| GAAACTCCAAGCGCAACAGC+GGG | + | chr8.4:23474734-23474753 | MS.gene011570:CDS | 55.0% | |
| GCCACAGATGAGGCATACAG+AGG | + | chr8.4:23476582-23476601 | MS.gene011570:CDS | 55.0% | |
| GCCTCTGTATGCCTCATCTG+TGG | - | chr8.4:23476586-23476605 | None:intergenic | 55.0% | |
| GGAGGTGAGGTGGATGAGTA+GGG | - | chr8.4:23475471-23475490 | None:intergenic | 55.0% | |
| TGGGAAAAACCAGGTCGACG+AGG | + | chr8.4:23474467-23474486 | MS.gene011570:CDS | 55.0% | |
| ! | CCCATCATGGTAACGCACCT+CGG | - | chr8.4:23474846-23474865 | None:intergenic | 55.0% |
| AACCAGGTCGACGAGGTCGA+CGG | + | chr8.4:23474474-23474493 | MS.gene011570:CDS | 60.0% | |
| GAAGTCCCCGCTGTTGCGCT+TGG | - | chr8.4:23474743-23474762 | None:intergenic | 65.0% | |
| GACCGTCGACCTCGTCGACC+TGG | - | chr8.4:23474479-23474498 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 23474368 | 23477192 | 23474368 | ID=MS.gene011570 |
| chr8.4 | mRNA | 23474368 | 23477192 | 23474368 | ID=MS.gene011570.t1;Parent=MS.gene011570 |
| chr8.4 | exon | 23474368 | 23475198 | 23474368 | ID=MS.gene011570.t1.exon1;Parent=MS.gene011570.t1 |
| chr8.4 | CDS | 23474368 | 23475198 | 23474368 | ID=cds.MS.gene011570.t1;Parent=MS.gene011570.t1 |
| chr8.4 | exon | 23475302 | 23475422 | 23475302 | ID=MS.gene011570.t1.exon2;Parent=MS.gene011570.t1 |
| chr8.4 | CDS | 23475302 | 23475422 | 23475302 | ID=cds.MS.gene011570.t1;Parent=MS.gene011570.t1 |
| chr8.4 | exon | 23475543 | 23475613 | 23475543 | ID=MS.gene011570.t1.exon3;Parent=MS.gene011570.t1 |
| chr8.4 | CDS | 23475543 | 23475613 | 23475543 | ID=cds.MS.gene011570.t1;Parent=MS.gene011570.t1 |
| chr8.4 | exon | 23475705 | 23475931 | 23475705 | ID=MS.gene011570.t1.exon4;Parent=MS.gene011570.t1 |
| chr8.4 | CDS | 23475705 | 23475931 | 23475705 | ID=cds.MS.gene011570.t1;Parent=MS.gene011570.t1 |
| chr8.4 | exon | 23476295 | 23476381 | 23476295 | ID=MS.gene011570.t1.exon5;Parent=MS.gene011570.t1 |
| chr8.4 | CDS | 23476295 | 23476381 | 23476295 | ID=cds.MS.gene011570.t1;Parent=MS.gene011570.t1 |
| chr8.4 | exon | 23476545 | 23476644 | 23476545 | ID=MS.gene011570.t1.exon6;Parent=MS.gene011570.t1 |
| chr8.4 | CDS | 23476545 | 23476644 | 23476545 | ID=cds.MS.gene011570.t1;Parent=MS.gene011570.t1 |
| chr8.4 | exon | 23476965 | 23477192 | 23476965 | ID=MS.gene011570.t1.exon7;Parent=MS.gene011570.t1 |
| chr8.4 | CDS | 23476965 | 23477192 | 23476965 | ID=cds.MS.gene011570.t1;Parent=MS.gene011570.t1 |
| Gene Sequence |
| Protein sequence |
