Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011577.t1 | KEH31628.1 | 96.2 | 547 | 21 | 0 | 1 | 547 | 1 | 547 | 3.00E-297 | 1030.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011577.t1 | Q8W4H1 | 49.0 | 522 | 230 | 14 | 16 | 523 | 8 | 507 | 1.6e-113 | 411.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011577.t1 | A0A072URD1 | 96.2 | 547 | 21 | 0 | 1 | 547 | 1 | 547 | 2.2e-297 | 1030.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene011577.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011577.t1 | MTR_4g099410 | 96.161 | 547 | 21 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1039 |
| MS.gene011577.t1 | MTR_5g013370 | 65.166 | 511 | 129 | 7 | 20 | 527 | 15 | 479 | 0.0 | 613 |
| MS.gene011577.t1 | MTR_5g013370 | 67.519 | 391 | 90 | 5 | 20 | 407 | 15 | 371 | 2.34e-172 | 492 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011577.t1 | AT4G17570 | 50.190 | 526 | 222 | 16 | 16 | 523 | 8 | 511 | 2.54e-134 | 400 |
| MS.gene011577.t1 | AT4G17570 | 50.000 | 526 | 226 | 15 | 13 | 523 | 20 | 523 | 7.02e-134 | 400 |
| MS.gene011577.t1 | AT4G17570 | 49.620 | 526 | 221 | 17 | 16 | 523 | 8 | 507 | 4.17e-129 | 387 |
| MS.gene011577.t1 | AT5G47140 | 45.247 | 526 | 204 | 14 | 16 | 523 | 8 | 467 | 7.83e-109 | 333 |
Find 110 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGATGTCTTGCTGTCTTC+AGG | 0.190344 | 8.4:-23600619 | None:intergenic |
| CCACATGCATTGCATAAAAT+TGG | 0.209606 | 8.4:-23597755 | None:intergenic |
| TGAGCAACCAAGCTAGAATT+TGG | 0.226392 | 8.4:-23601452 | None:intergenic |
| GTCTTTGATATCTCTTTGTT+GGG | 0.253338 | 8.4:+23600589 | MS.gene011577:CDS |
| AACTTTAAAATGTTTCATTT+AGG | 0.259693 | 8.4:+23597256 | MS.gene011577:CDS |
| TATCCTCATCAACTGCCTTT+TGG | 0.266263 | 8.4:-23597988 | None:intergenic |
| TGGAATCCTTGATTATATTC+AGG | 0.275290 | 8.4:-23597968 | None:intergenic |
| TAAGAACAAAGAAGTGAAAT+TGG | 0.296795 | 8.4:+23597892 | MS.gene011577:CDS |
| CAGGGAGATACTTAAGTAAT+TGG | 0.298706 | 8.4:-23600303 | None:intergenic |
| GTCCTTCTCAGTCAGTAGTC+TGG | 0.317764 | 8.4:+23598657 | MS.gene011577:CDS |
| AGTTGCTCCTGTTGCAGTCT+TGG | 0.319535 | 8.4:-23599061 | None:intergenic |
| AGCTGGAAAACGTAATGATA+TGG | 0.322982 | 8.4:+23600933 | MS.gene011577:CDS |
| TGTCTTTGATATCTCTTTGT+TGG | 0.324495 | 8.4:+23600588 | MS.gene011577:CDS |
| TCAGAAAGCTGCGTTCAATT+TGG | 0.340455 | 8.4:+23598049 | MS.gene011577:CDS |
| GTTGCTCCTGTTGCAGTCTT+GGG | 0.346225 | 8.4:-23599060 | None:intergenic |
| AACAGGATTGCTGTTGTTCA+TGG | 0.347627 | 8.4:-23598772 | None:intergenic |
| GTAAAAGATTCTAACCTATC+AGG | 0.352482 | 8.4:-23600346 | None:intergenic |
| TTCAGAAGAAGCAGAGAAAC+AGG | 0.359840 | 8.4:-23598789 | None:intergenic |
| TGCTGGCCCAAGACTGCAAC+AGG | 0.360278 | 8.4:+23599054 | MS.gene011577:CDS |
| GCACACCACTTTGGCGTAAC+GGG | 0.374021 | 8.4:+23597720 | MS.gene011577:CDS |
| ATACTGCTAAATTTCCTGAT+AGG | 0.379031 | 8.4:+23600332 | MS.gene011577:CDS |
| GACATGGAAGCATGCTTATT+AGG | 0.380641 | 8.4:+23598861 | MS.gene011577:CDS |
| AATGAGGCATATTCGTGTTA+TGG | 0.381814 | 8.4:+23598959 | MS.gene011577:CDS |
| TAGATGTCTTGCTGTCTTCA+GGG | 0.385451 | 8.4:-23600618 | None:intergenic |
| AAGACAGCAAGACATCTAAA+AGG | 0.389266 | 8.4:+23600623 | MS.gene011577:CDS |
| GTTCGATAGCTTTCAATTCA+AGG | 0.390519 | 8.4:+23600528 | MS.gene011577:CDS |
| ACGAATATGCCTCATTCATT+AGG | 0.397130 | 8.4:-23598952 | None:intergenic |
| GATAATGCTTATGCTGCATC+TGG | 0.405843 | 8.4:+23597935 | MS.gene011577:CDS |
| ACAAGCAATAGATCAAGTTC+AGG | 0.405979 | 8.4:+23598010 | MS.gene011577:CDS |
| ATTGCATAAAATTGGCTTCT+CGG | 0.425605 | 8.4:-23597747 | None:intergenic |
| CGTTGATGAGAGTTCGGATC+AGG | 0.428748 | 8.4:+23601373 | MS.gene011577:CDS |
| TGGCATGAATTTCTCTTCGC+AGG | 0.430969 | 8.4:+23599009 | MS.gene011577:CDS |
| AAACTTCGTTGATGAGAGTT+CGG | 0.431868 | 8.4:+23601367 | MS.gene011577:CDS |
| GGAATCCTTGATTATATTCA+GGG | 0.435974 | 8.4:-23597967 | None:intergenic |
| CACTGCGAGGAAATGCAAAT+AGG | 0.438489 | 8.4:-23601319 | None:intergenic |
| TTTCTCTGCTTCTTCTGAAG+AGG | 0.445798 | 8.4:+23598793 | MS.gene011577:CDS |
| TTGCATAAAATTGGCTTCTC+GGG | 0.450813 | 8.4:-23597746 | None:intergenic |
| CCGATGGTCTCTGTTGAGAT+AGG | 0.451064 | 8.4:+23598839 | MS.gene011577:CDS |
| GAGCAACCAAGCTAGAATTT+GGG | 0.456850 | 8.4:-23601451 | None:intergenic |
| CAGTGGTGGTTTGCACATGC+TGG | 0.456919 | 8.4:+23601337 | MS.gene011577:CDS |
| CTCTGATCCTCAAAATCGAC+AGG | 0.463314 | 8.4:-23597839 | None:intergenic |
| GGCGGCAAAGAAGCTGTAGA+TGG | 0.477576 | 8.4:+23601275 | MS.gene011577:CDS |
| GAAAGCTGCGTTCAATTTGG+CGG | 0.481959 | 8.4:+23598052 | MS.gene011577:CDS |
| CAACAATGAGGAGTCCCAAA+AGG | 0.482639 | 8.4:+23601231 | MS.gene011577:CDS |
| TCTTTGATATCTCTTTGTTG+GGG | 0.483519 | 8.4:+23600590 | MS.gene011577:CDS |
| GCCAGTGTAATCACTAAGCA+TGG | 0.486056 | 8.4:-23598990 | None:intergenic |
| TCCTTCTCAGTCAGTAGTCT+GGG | 0.492734 | 8.4:+23598658 | MS.gene011577:CDS |
| TGTGGAAAAGAATTGTTAGA+TGG | 0.494479 | 8.4:-23601413 | None:intergenic |
| ATTATACTCCTTTACATGCT+CGG | 0.500610 | 8.4:+23597810 | MS.gene011577:CDS |
| CTCTTCGCAGGGAGTTGCAA+AGG | 0.501331 | 8.4:+23599021 | MS.gene011577:CDS |
| CATAAAATTGGCTTCTCGGG+TGG | 0.513655 | 8.4:-23597743 | None:intergenic |
| TTGAGGATCAGAGAGTTTCA+AGG | 0.515344 | 8.4:+23597849 | MS.gene011577:CDS |
| CCTGCTCCCAAATTCTAGCT+TGG | 0.516464 | 8.4:+23601445 | MS.gene011577:CDS |
| CAGAAAGGTGGAAACAAAGC+TGG | 0.517998 | 8.4:+23600916 | MS.gene011577:intron |
| TTTGATATCTCTTTGTTGGG+GGG | 0.526888 | 8.4:+23600592 | MS.gene011577:CDS |
| CTTTGATATCTCTTTGTTGG+GGG | 0.529936 | 8.4:+23600591 | MS.gene011577:CDS |
| AATTCTAGCTTGGTTGCTCA+AGG | 0.529989 | 8.4:+23601455 | MS.gene011577:CDS |
| CGAGTATACTGAGCTACTAC+TGG | 0.530369 | 8.4:-23601483 | None:intergenic |
| CGCAACATTACTTGATGCCA+CGG | 0.532105 | 8.4:-23600965 | None:intergenic |
| GGCACACCACTTTGGCGTAA+CGG | 0.532158 | 8.4:+23597719 | MS.gene011577:intron |
| TAAACAATGCCTAATGAATG+AGG | 0.536919 | 8.4:+23598943 | MS.gene011577:CDS |
| GGATCTGTCCGAGCATGTAA+AGG | 0.539952 | 8.4:-23597818 | None:intergenic |
| TTGCAATAGGCACACCACTT+TGG | 0.540892 | 8.4:+23597711 | MS.gene011577:intron |
| TTTCAGAAACTTCTCGAGGA+AGG | 0.544680 | 8.4:+23600565 | MS.gene011577:CDS |
| ACCTGTCAAATCACTAGCAT+CGG | 0.546237 | 8.4:-23598077 | None:intergenic |
| GCAAAGGTCAGAAACTCTGC+TGG | 0.547430 | 8.4:+23599037 | MS.gene011577:CDS |
| ACCGATGCTAGTGATTTGAC+AGG | 0.552424 | 8.4:+23598076 | MS.gene011577:CDS |
| CCAAGCTAGAATTTGGGAGC+AGG | 0.553665 | 8.4:-23601445 | None:intergenic |
| AACAATGAGGAGTCCCAAAA+GGG | 0.557773 | 8.4:+23601232 | MS.gene011577:CDS |
| TTCACCCCTGAATATAATCA+AGG | 0.559752 | 8.4:+23597962 | MS.gene011577:CDS |
| ACATTACTTGATGCCACGGC+AGG | 0.560071 | 8.4:-23600961 | None:intergenic |
| GGCATGAATTTCTCTTCGCA+GGG | 0.560916 | 8.4:+23599010 | MS.gene011577:CDS |
| AATTTAGCAGTATCAACCAC+AGG | 0.561300 | 8.4:-23600322 | None:intergenic |
| CTATTTGCATTTCCTCGCAG+TGG | 0.562159 | 8.4:+23601320 | MS.gene011577:CDS |
| TCGTCGTGAGCTATAGAGCT+AGG | 0.565637 | 8.4:-23598887 | None:intergenic |
| GGATCTCGATGGAGGACAAA+GGG | 0.566793 | 8.4:+23597776 | MS.gene011577:CDS |
| TTACGAAAGTGAAACTCCGA+TGG | 0.575376 | 8.4:+23598823 | MS.gene011577:CDS |
| TTTGCATTTCCTCGCAGTGG+TGG | 0.579377 | 8.4:+23601323 | MS.gene011577:CDS |
| ATATAATCAAGGATTCCAAA+AGG | 0.579451 | 8.4:+23597973 | MS.gene011577:CDS |
| AAAAGGGTGATAGTAAAAGC+TGG | 0.582014 | 8.4:+23601248 | MS.gene011577:CDS |
| GTGATAGTAAAAGCTGGCAC+TGG | 0.584702 | 8.4:+23601254 | MS.gene011577:CDS |
| GCAGCTTTCTGAATTAGAGA+TGG | 0.584857 | 8.4:-23598038 | None:intergenic |
| CAAGCAATAGATCAAGTTCA+GGG | 0.586403 | 8.4:+23598011 | MS.gene011577:CDS |
| ATTCCAAAAGGCAGTTGATG+AGG | 0.590752 | 8.4:+23597985 | MS.gene011577:CDS |
| AAGTTTGAAGCGCACACCAA+CGG | 0.591805 | 8.4:-23597238 | None:intergenic |
| AGCTCACGACGAAGAGTCTG+AGG | 0.592909 | 8.4:+23598898 | MS.gene011577:CDS |
| GTCTCTGTTGAGATAGGACA+TGG | 0.594614 | 8.4:+23598845 | MS.gene011577:CDS |
| ATGCTTATGCTGCATCTGGA+TGG | 0.594811 | 8.4:+23597939 | MS.gene011577:CDS |
| TGGATCTCGATGGAGGACAA+AGG | 0.599405 | 8.4:+23597775 | MS.gene011577:CDS |
| ATAGTAAAAGCTGGCACTGG+CGG | 0.601425 | 8.4:+23601257 | MS.gene011577:CDS |
| AATGTTGAAGTCGTTGCCGT+TGG | 0.603027 | 8.4:+23597222 | None:intergenic |
| CTTCTACGAGTGCAGAAAGG+TGG | 0.623014 | 8.4:+23600904 | MS.gene011577:intron |
| TTAGGATGTAGTGAACTATG+AGG | 0.626601 | 8.4:+23600246 | MS.gene011577:intron |
| CCAGTGTAATCACTAAGCAT+GGG | 0.628822 | 8.4:-23598989 | None:intergenic |
| CAGAATTGAAGACAACAATG+AGG | 0.642781 | 8.4:+23601219 | MS.gene011577:intron |
| CCTATCTCAACAGAGACCAT+CGG | 0.650405 | 8.4:-23598839 | None:intergenic |
| TGATATGGAATCTCCTGCCG+TGG | 0.657248 | 8.4:+23600948 | MS.gene011577:CDS |
| CGATAGCTTTCAATTCAAGG+AGG | 0.658269 | 8.4:+23600531 | MS.gene011577:CDS |
| GAATCCTTGATTATATTCAG+GGG | 0.659607 | 8.4:-23597966 | None:intergenic |
| GCAATGCATGTGGATCTCGA+TGG | 0.669120 | 8.4:+23597765 | MS.gene011577:CDS |
| GGTGGCCCGTTACGCCAAAG+TGG | 0.670404 | 8.4:-23597725 | None:intergenic |
| CCCATGCTTAGTGATTACAC+TGG | 0.670617 | 8.4:+23598989 | MS.gene011577:CDS |
| TCCCAGACTACTGACTGAGA+AGG | 0.674040 | 8.4:-23598659 | None:intergenic |
| GGGAGCAGGAGTTCTGCCTG+TGG | 0.680286 | 8.4:-23601431 | None:intergenic |
| ATGCATGTGGATCTCGATGG+AGG | 0.680507 | 8.4:+23597768 | MS.gene011577:CDS |
| TGCAACAGGAGCAACTTGTG+AGG | 0.690933 | 8.4:+23599068 | MS.gene011577:CDS |
| GTCAGTAGTCTGGGATACTG+CGG | 0.691443 | 8.4:+23598667 | MS.gene011577:CDS |
| ATTACTTAAGTATCTCCCTG+TGG | 0.700728 | 8.4:+23600306 | MS.gene011577:CDS |
| ATTTAGCAGTATCAACCACA+GGG | 0.717915 | 8.4:-23600321 | None:intergenic |
| ATGTGCAAACCACCACTGCG+AGG | 0.730332 | 8.4:-23601332 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTGATTTGAATAAAAA+TGG | - | chr8.4:23599652-23599671 | None:intergenic | 10.0% |
| !!! | TTTTGCAATAATTTTATATT+CGG | - | chr8.4:23601069-23601088 | None:intergenic | 10.0% |
| !!! | AAATGATTTTTAATACTGTT+TGG | + | chr8.4:23599806-23599825 | MS.gene011577:intron | 15.0% |
| !!! | AACAATAGTTTTGTTAATTT+AGG | + | chr8.4:23598635-23598654 | MS.gene011577:intron | 15.0% |
| !!! | AACTTTAAAATGTTTCATTT+AGG | + | chr8.4:23597256-23597275 | MS.gene011577:CDS | 15.0% |
| !!! | AATGATTTTTAATACTGTTT+GGG | + | chr8.4:23599807-23599826 | MS.gene011577:intron | 15.0% |
| !!! | CATATTAATTTAATGTGTTT+TGG | + | chr8.4:23599721-23599740 | MS.gene011577:intron | 15.0% |
| !!! | TTAAAGTATTTTCTAAATGA+AGG | + | chr8.4:23598394-23598413 | MS.gene011577:intron | 15.0% |
| !! | AAAATTGAAACTTATGTTCA+AGG | - | chr8.4:23600443-23600462 | None:intergenic | 20.0% |
| !! | AATGGTATAACAATTATGAT+TGG | - | chr8.4:23599203-23599222 | None:intergenic | 20.0% |
| !! | CTAACTCTTAAAGATAAAAA+AGG | - | chr8.4:23600842-23600861 | None:intergenic | 20.0% |
| !! | CTTACAAAACAAAATCAAAA+TGG | - | chr8.4:23600413-23600432 | None:intergenic | 20.0% |
| !! | GAATAAATATCAAGTCTTAA+AGG | - | chr8.4:23599444-23599463 | None:intergenic | 20.0% |
| !! | GTATTAACAAATTGACATTA+TGG | + | chr8.4:23600003-23600022 | MS.gene011577:intron | 20.0% |
| !! | TATGTAAAATATCTTGTAAC+AGG | + | chr8.4:23597469-23597488 | MS.gene011577:intron | 20.0% |
| !! | TCTTAAAGATAAAAAAGGAT+AGG | - | chr8.4:23600837-23600856 | None:intergenic | 20.0% |
| !! | TTACAAACGCATTTATAATT+AGG | + | chr8.4:23599897-23599916 | MS.gene011577:intron | 20.0% |
| !!! | AAAGCATAACATATTTTGTT+TGG | + | chr8.4:23600769-23600788 | MS.gene011577:intron | 20.0% |
| !!! | AAATGATATGATCATGATTT+TGG | + | chr8.4:23599853-23599872 | MS.gene011577:intron | 20.0% |
| !!! | AATGATATGATCATGATTTT+GGG | + | chr8.4:23599854-23599873 | MS.gene011577:intron | 20.0% |
| !!! | ATAACATATTTTGTTTGGTT+TGG | + | chr8.4:23600774-23600793 | MS.gene011577:intron | 20.0% |
| !!! | TATTCCTTTTTGAAATTTCA+GGG | + | chr8.4:23599459-23599478 | MS.gene011577:intron | 20.0% |
| !!! | TGTGATTTTTAATTGTCTAT+CGG | + | chr8.4:23597610-23597629 | MS.gene011577:intron | 20.0% |
| !!! | TTAAGCATTCATTAATTTTG+TGG | - | chr8.4:23600205-23600224 | None:intergenic | 20.0% |
| !!! | TTATTCCTTTTTGAAATTTC+AGG | + | chr8.4:23599458-23599477 | MS.gene011577:intron | 20.0% |
| !!! | TTGAAGTAAAATGTTTTGAA+TGG | - | chr8.4:23599221-23599240 | None:intergenic | 20.0% |
| !!! | TTGCTTTTATTAAAGAAACA+AGG | - | chr8.4:23598604-23598623 | None:intergenic | 20.0% |
| ! | AATCATATGTGTAACTTTAG+TGG | - | chr8.4:23599253-23599272 | None:intergenic | 25.0% |
| ! | ATAAATTCCTCAAGCAAATA+TGG | - | chr8.4:23597393-23597412 | None:intergenic | 25.0% |
| ! | ATAATTTCATGCATTACTCT+TGG | + | chr8.4:23599757-23599776 | MS.gene011577:intron | 25.0% |
| ! | ATATAATCAAGGATTCCAAA+AGG | + | chr8.4:23597973-23597992 | MS.gene011577:CDS | 25.0% |
| ! | GAATTGCAAATGAACATATA+AGG | + | chr8.4:23598269-23598288 | MS.gene011577:intron | 25.0% |
| ! | GACATTATGGTTTGATTAAT+TGG | + | chr8.4:23600016-23600035 | MS.gene011577:intron | 25.0% |
| ! | TAAATTCCTCAAGCAAATAT+GGG | - | chr8.4:23597392-23597411 | None:intergenic | 25.0% |
| ! | TAACAAATAATCCTTGCAAT+AGG | + | chr8.4:23597698-23597717 | MS.gene011577:intron | 25.0% |
| ! | TAAGAACAAAGAAGTGAAAT+TGG | + | chr8.4:23597892-23597911 | MS.gene011577:CDS | 25.0% |
| ! | TAATTTCATGCATTACTCTT+GGG | + | chr8.4:23599758-23599777 | MS.gene011577:intron | 25.0% |
| ! | TATCAGTATTCAAGATCATA+AGG | - | chr8.4:23597530-23597549 | None:intergenic | 25.0% |
| ! | TCAAATATTCTATCCTAACA+TGG | + | chr8.4:23599664-23599683 | MS.gene011577:intron | 25.0% |
| ! | TCTATAGTATTTCAACTGAA+AGG | - | chr8.4:23598169-23598188 | None:intergenic | 25.0% |
| ! | TTAGTACTTAATACAAGACT+GGG | - | chr8.4:23599627-23599646 | None:intergenic | 25.0% |
| ! | TTGGTTTCAAAATTTGTATC+TGG | + | chr8.4:23600803-23600822 | MS.gene011577:intron | 25.0% |
| ! | TTTAGTACTTAATACAAGAC+TGG | - | chr8.4:23599628-23599647 | None:intergenic | 25.0% |
| ! | TTTCACCATATAGATATTTG+TGG | + | chr8.4:23599976-23599995 | MS.gene011577:intron | 25.0% |
| !! | AAGAAGTGCATAATAAAATG+GGG | + | chr8.4:23598222-23598241 | MS.gene011577:intron | 25.0% |
| !! | AGAACACTATAATTTTCTCA+AGG | + | chr8.4:23600681-23600700 | MS.gene011577:CDS | 25.0% |
| !! | ATAACTTTTATTCCCTATTC+CGG | - | chr8.4:23600472-23600491 | None:intergenic | 25.0% |
| !! | CAAGAAGTGCATAATAAAAT+GGG | + | chr8.4:23598221-23598240 | MS.gene011577:intron | 25.0% |
| !! | CAGATAAATGTTAATCCTTT+TGG | + | chr8.4:23597309-23597328 | MS.gene011577:intron | 25.0% |
| !! | TCAAGAAGTGCATAATAAAA+TGG | + | chr8.4:23598220-23598239 | MS.gene011577:intron | 25.0% |
| AAATATTAGAGATAAGCCTG+TGG | + | chr8.4:23599385-23599404 | MS.gene011577:intron | 30.0% | |
| AACCTCTTACAACTGTATAT+TGG | + | chr8.4:23600074-23600093 | MS.gene011577:intron | 30.0% | |
| AATATCTGTCATGTTTGGTT+AGG | + | chr8.4:23600228-23600247 | MS.gene011577:intron | 30.0% | |
| AATGCAATATCTGTCATGTT+TGG | + | chr8.4:23600223-23600242 | MS.gene011577:intron | 30.0% | |
| AGATATTGGACAATTTAAGC+AGG | + | chr8.4:23597493-23597512 | MS.gene011577:intron | 30.0% | |
| AGGGAATAAAAGTTATTGAC+CGG | + | chr8.4:23600476-23600495 | MS.gene011577:intron | 30.0% | |
| ATACTGCTAAATTTCCTGAT+AGG | + | chr8.4:23600332-23600351 | MS.gene011577:CDS | 30.0% | |
| ATCGATGTGTTTCAAAGTAA+AGG | - | chr8.4:23601110-23601129 | None:intergenic | 30.0% | |
| ATCTTGTAACAGGAAGATAT+TGG | + | chr8.4:23597479-23597498 | MS.gene011577:intron | 30.0% | |
| ATGAATAGTCTTTGTACATG+TGG | + | chr8.4:23599352-23599371 | MS.gene011577:intron | 30.0% | |
| ATTATACTCCTTTACATGCT+CGG | + | chr8.4:23597810-23597829 | MS.gene011577:CDS | 30.0% | |
| CATCTCCACAAATATCTATA+TGG | - | chr8.4:23599984-23600003 | None:intergenic | 30.0% | |
| CGACCAATATACAGTTAAAA+GGG | - | chr8.4:23600163-23600182 | None:intergenic | 30.0% | |
| CTTGAAAAACTAGAAGTTCT+TGG | + | chr8.4:23599493-23599512 | MS.gene011577:CDS | 30.0% | |
| GAATCCTTGATTATATTCAG+GGG | - | chr8.4:23597969-23597988 | None:intergenic | 30.0% | |
| GGAATCCTTGATTATATTCA+GGG | - | chr8.4:23597970-23597989 | None:intergenic | 30.0% | |
| GTAAAAGATTCTAACCTATC+AGG | - | chr8.4:23600349-23600368 | None:intergenic | 30.0% | |
| GTCTTTGATATCTCTTTGTT+GGG | + | chr8.4:23600589-23600608 | MS.gene011577:CDS | 30.0% | |
| TAAACAATGCCTAATGAATG+AGG | + | chr8.4:23598943-23598962 | MS.gene011577:CDS | 30.0% | |
| TCTTACAACTGTATATTGGT+CGG | + | chr8.4:23600078-23600097 | MS.gene011577:intron | 30.0% | |
| TCTTTGATATCTCTTTGTTG+GGG | + | chr8.4:23600590-23600609 | MS.gene011577:CDS | 30.0% | |
| TGAACTAATCCAATCTAAAC+TGG | - | chr8.4:23600870-23600889 | None:intergenic | 30.0% | |
| TGAACTCAGAAAACATCTTA+AGG | - | chr8.4:23597569-23597588 | None:intergenic | 30.0% | |
| TGGAATCCTTGATTATATTC+AGG | - | chr8.4:23597971-23597990 | None:intergenic | 30.0% | |
| TGTCTTTGATATCTCTTTGT+TGG | + | chr8.4:23600588-23600607 | MS.gene011577:CDS | 30.0% | |
| TGTGGAAAAGAATTGTTAGA+TGG | - | chr8.4:23601416-23601435 | None:intergenic | 30.0% | |
| TTGAGGAATTTATTGCATAC+CGG | + | chr8.4:23597400-23597419 | MS.gene011577:intron | 30.0% | |
| TTGATTATGCTCGAACAAAT+AGG | - | chr8.4:23598204-23598223 | None:intergenic | 30.0% | |
| TTGTCCCTGAAATTTCAAAA+AGG | - | chr8.4:23599466-23599485 | None:intergenic | 30.0% | |
| ! | AAGTTTCAATTTTGTCTCTC+CGG | + | chr8.4:23600450-23600469 | MS.gene011577:intron | 30.0% |
| ! | ACAAGAGATTTTAAGCTAAC+CGG | - | chr8.4:23601031-23601050 | None:intergenic | 30.0% |
| ! | ACTCTTTTCTTGTGTATAAG+AGG | + | chr8.4:23597651-23597670 | MS.gene011577:intron | 30.0% |
| ! | AGCCAAAATCAAAATTTTCC+CGG | + | chr8.4:23601009-23601028 | MS.gene011577:CDS | 30.0% |
| ! | ATCTAACAATTCTTTTCCAC+AGG | + | chr8.4:23601415-23601434 | MS.gene011577:CDS | 30.0% |
| ! | ATTGCATAAAATTGGCTTCT+CGG | - | chr8.4:23597750-23597769 | None:intergenic | 30.0% |
| ! | CTCTTTTCTTGTGTATAAGA+GGG | + | chr8.4:23597652-23597671 | MS.gene011577:intron | 30.0% |
| ! | TATCTTCTTTTCCTTGCAAA+AGG | + | chr8.4:23597423-23597442 | MS.gene011577:intron | 30.0% |
| ! | TTACATTGATAGTATTCTCC+TGG | + | chr8.4:23599303-23599322 | MS.gene011577:intron | 30.0% |
| ! | TTATTTTCAGAAACTTCTCG+AGG | + | chr8.4:23600561-23600580 | MS.gene011577:CDS | 30.0% |
| ! | TTTTAATACTGTTTGGGAGT+AGG | + | chr8.4:23599813-23599832 | MS.gene011577:intron | 30.0% |
| !! | AAAAGCATTAGCATGATTCT+AGG | - | chr8.4:23600724-23600743 | None:intergenic | 30.0% |
| !! | CCTTTTAACTGTATATTGGT+CGG | + | chr8.4:23600161-23600180 | MS.gene011577:intron | 30.0% |
| !! | TTGCCCTTTTAACTGTATAT+TGG | + | chr8.4:23600157-23600176 | MS.gene011577:intron | 30.0% |
| !!! | AACCGGGAAAATTTTGATTT+TGG | - | chr8.4:23601014-23601033 | None:intergenic | 30.0% |
| !!! | TCTTTTTTCCCCTCTTTTTA+TGG | + | chr8.4:23599570-23599589 | MS.gene011577:intron | 30.0% |
| !!! | TTAGTTTTGCCAGTTTAGAT+TGG | + | chr8.4:23600858-23600877 | MS.gene011577:intron | 30.0% |
| AAAAGGGTGATAGTAAAAGC+TGG | + | chr8.4:23601248-23601267 | MS.gene011577:CDS | 35.0% | |
| AAGACAGCAAGACATCTAAA+AGG | + | chr8.4:23600623-23600642 | MS.gene011577:CDS | 35.0% | |
| AATGAGGCATATTCGTGTTA+TGG | + | chr8.4:23598959-23598978 | MS.gene011577:CDS | 35.0% | |
| AATTTAGCAGTATCAACCAC+AGG | - | chr8.4:23600325-23600344 | None:intergenic | 35.0% | |
| ACAAGCAATAGATCAAGTTC+AGG | + | chr8.4:23598010-23598029 | MS.gene011577:CDS | 35.0% | |
| ACGAATATGCCTCATTCATT+AGG | - | chr8.4:23598955-23598974 | None:intergenic | 35.0% | |
| AGCTGGAAAACGTAATGATA+TGG | + | chr8.4:23600933-23600952 | MS.gene011577:CDS | 35.0% | |
| ATGCTTGGATTTGAACCAAA+AGG | - | chr8.4:23597327-23597346 | None:intergenic | 35.0% | |
| ATGGGTGAACTCAATTTAAG+AGG | - | chr8.4:23597374-23597393 | None:intergenic | 35.0% | |
| ATTACTTAAGTATCTCCCTG+TGG | + | chr8.4:23600306-23600325 | MS.gene011577:CDS | 35.0% | |
| ATTTAGCAGTATCAACCACA+GGG | - | chr8.4:23600324-23600343 | None:intergenic | 35.0% | |
| CAAGCAATAGATCAAGTTCA+GGG | + | chr8.4:23598011-23598030 | MS.gene011577:CDS | 35.0% | |
| CAGGGAGATACTTAAGTAAT+TGG | - | chr8.4:23600306-23600325 | None:intergenic | 35.0% | |
| CATATGTGTAACTTTAGTGG+TGG | - | chr8.4:23599250-23599269 | None:intergenic | 35.0% | |
| CCACATGCATTGCATAAAAT+TGG | - | chr8.4:23597758-23597777 | None:intergenic | 35.0% | |
| CCGAACAAACCATAAAAAGA+GGG | - | chr8.4:23599582-23599601 | None:intergenic | 35.0% | |
| CCGACCAATATACAGTTAAA+AGG | - | chr8.4:23600164-23600183 | None:intergenic | 35.0% | |
| CGAACAAACCATAAAAAGAG+GGG | - | chr8.4:23599581-23599600 | None:intergenic | 35.0% | |
| CGTGAAGATTTGCATATATG+AGG | + | chr8.4:23598509-23598528 | MS.gene011577:intron | 35.0% | |
| CTTTGATATCTCTTTGTTGG+GGG | + | chr8.4:23600591-23600610 | MS.gene011577:CDS | 35.0% | |
| GACCAATATACAGTTGTAAG+AGG | - | chr8.4:23600079-23600098 | None:intergenic | 35.0% | |
| GGTTAATTGATATGCACTGA+TGG | - | chr8.4:23600058-23600077 | None:intergenic | 35.0% | |
| GTGTCTCAAAACAATTGCAA+TGG | + | chr8.4:23598424-23598443 | MS.gene011577:intron | 35.0% | |
| GTTCGATAGCTTTCAATTCA+AGG | + | chr8.4:23600528-23600547 | MS.gene011577:CDS | 35.0% | |
| TCAAAAAAGAGGACATGTAC+TGG | + | chr8.4:23598695-23598714 | MS.gene011577:CDS | 35.0% | |
| TGTCTATCGGTCTTTCTAAT+TGG | + | chr8.4:23597623-23597642 | MS.gene011577:intron | 35.0% | |
| TGTTTCTTCATAACCGATCA+TGG | + | chr8.4:23598134-23598153 | MS.gene011577:intron | 35.0% | |
| TTAGGATGTAGTGAACTATG+AGG | + | chr8.4:23600246-23600265 | MS.gene011577:intron | 35.0% | |
| TTCACCCCTGAATATAATCA+AGG | + | chr8.4:23597962-23597981 | MS.gene011577:CDS | 35.0% | |
| TTCTCCAAAACAAATTCCAC+AGG | - | chr8.4:23599404-23599423 | None:intergenic | 35.0% | |
| TTGCAAGGAAAAGAAGATAC+CGG | - | chr8.4:23597422-23597441 | None:intergenic | 35.0% | |
| TTGGACAATTTAAGCAGGAA+TGG | + | chr8.4:23597498-23597517 | MS.gene011577:intron | 35.0% | |
| TTTGATATCTCTTTGTTGGG+GGG | + | chr8.4:23600592-23600611 | MS.gene011577:CDS | 35.0% | |
| ! | AAACTTCGTTGATGAGAGTT+CGG | + | chr8.4:23601367-23601386 | MS.gene011577:CDS | 35.0% |
| ! | AATTTTCTCAAGGTTTGTGC+TGG | + | chr8.4:23600691-23600710 | MS.gene011577:intron | 35.0% |
| ! | AATTTTGTCTCTCCGGAATA+GGG | + | chr8.4:23600457-23600476 | MS.gene011577:intron | 35.0% |
| ! | AGCTTTTACTATCACCCTTT+TGG | - | chr8.4:23601249-23601268 | None:intergenic | 35.0% |
| ! | AGGATAACTTGTCTTCCTTT+AGG | - | chr8.4:23598305-23598324 | None:intergenic | 35.0% |
| ! | CAAGAGATTTTAAGCTAACC+GGG | - | chr8.4:23601030-23601049 | None:intergenic | 35.0% |
| ! | CCAATTTTATGCAATGCATG+TGG | + | chr8.4:23597755-23597774 | MS.gene011577:CDS | 35.0% |
| ! | GCTTTTACTATCACCCTTTT+GGG | - | chr8.4:23601248-23601267 | None:intergenic | 35.0% |
| ! | GGAAATGCAAATAGGCTTTT+CGG | - | chr8.4:23601314-23601333 | None:intergenic | 35.0% |
| ! | GGATAACTTGTCTTCCTTTA+GGG | - | chr8.4:23598304-23598323 | None:intergenic | 35.0% |
| ! | GTTTTCTGAGTTCAGTTTTG+TGG | + | chr8.4:23597575-23597594 | MS.gene011577:intron | 35.0% |
| ! | TTGCATAAAATTGGCTTCTC+GGG | - | chr8.4:23597749-23597768 | None:intergenic | 35.0% |
| !! | TAAGCCTGTGGAATTTGTTT+TGG | + | chr8.4:23599397-23599416 | MS.gene011577:intron | 35.0% |
| !! | TTGTTTGGTTTGGATGTAGT+TGG | + | chr8.4:23600784-23600803 | MS.gene011577:intron | 35.0% |
| !!! | CCCTCTTTTTATGGTTTGTT+CGG | + | chr8.4:23599579-23599598 | MS.gene011577:intron | 35.0% |
| !!! | GTACATGTCCTCTTTTTTGA+AGG | - | chr8.4:23598695-23598714 | None:intergenic | 35.0% |
| AACAATGAGGAGTCCCAAAA+GGG | + | chr8.4:23601232-23601251 | MS.gene011577:CDS | 40.0% | |
| ACCTGTCAAATCACTAGCAT+CGG | - | chr8.4:23598080-23598099 | None:intergenic | 40.0% | |
| AGTTCACCCATATTTGCTTG+AGG | + | chr8.4:23597383-23597402 | MS.gene011577:intron | 40.0% | |
| ATCTACTGCAGCTCAAAAAC+AGG | + | chr8.4:23598575-23598594 | MS.gene011577:intron | 40.0% | |
| ATGCTAGTGATTTGACAGGT+TGG | + | chr8.4:23598080-23598099 | MS.gene011577:intron | 40.0% | |
| ATTCTTCTACGAGTGCAGAA+AGG | + | chr8.4:23600901-23600920 | MS.gene011577:intron | 40.0% | |
| CCAGTGTAATCACTAAGCAT+GGG | - | chr8.4:23598992-23599011 | None:intergenic | 40.0% | |
| CGATAGCTTTCAATTCAAGG+AGG | + | chr8.4:23600531-23600550 | MS.gene011577:CDS | 40.0% | |
| GAGCAACCAAGCTAGAATTT+GGG | - | chr8.4:23601454-23601473 | None:intergenic | 40.0% | |
| GATAATGCTTATGCTGCATC+TGG | + | chr8.4:23597935-23597954 | MS.gene011577:CDS | 40.0% | |
| GCAGCTTTCTGAATTAGAGA+TGG | - | chr8.4:23598041-23598060 | None:intergenic | 40.0% | |
| GCCGAACAAACCATAAAAAG+AGG | - | chr8.4:23599583-23599602 | None:intergenic | 40.0% | |
| GGTACAATACACCAAATGGT+GGG | + | chr8.4:23600099-23600118 | MS.gene011577:intron | 40.0% | |
| TCAGAAAGCTGCGTTCAATT+TGG | + | chr8.4:23598049-23598068 | MS.gene011577:CDS | 40.0% | |
| TCTTTGTACATGTGGCTTAG+TGG | + | chr8.4:23599360-23599379 | MS.gene011577:intron | 40.0% | |
| TGAGCAACCAAGCTAGAATT+TGG | - | chr8.4:23601455-23601474 | None:intergenic | 40.0% | |
| TTACGAAAGTGAAACTCCGA+TGG | + | chr8.4:23598823-23598842 | MS.gene011577:CDS | 40.0% | |
| TTCAGAAGAAGCAGAGAAAC+AGG | - | chr8.4:23598792-23598811 | None:intergenic | 40.0% | |
| TTGAGGATCAGAGAGTTTCA+AGG | + | chr8.4:23597849-23597868 | MS.gene011577:CDS | 40.0% | |
| TTTCAGAAACTTCTCGAGGA+AGG | + | chr8.4:23600565-23600584 | MS.gene011577:CDS | 40.0% | |
| ! | AACAGGATTGCTGTTGTTCA+TGG | - | chr8.4:23598775-23598794 | None:intergenic | 40.0% |
| ! | ATTCCAAAAGGCAGTTGATG+AGG | + | chr8.4:23597985-23598004 | MS.gene011577:CDS | 40.0% |
| ! | CAATTTTGTCTCTCCGGAAT+AGG | + | chr8.4:23600456-23600475 | MS.gene011577:intron | 40.0% |
| ! | GACATGGAAGCATGCTTATT+AGG | + | chr8.4:23598861-23598880 | MS.gene011577:CDS | 40.0% |
| ! | GTCTTCCTTTAGGGAAACAA+AGG | - | chr8.4:23598295-23598314 | None:intergenic | 40.0% |
| ! | TAAGGCCTTTGTTTCCCTAA+AGG | + | chr8.4:23598287-23598306 | MS.gene011577:intron | 40.0% |
| ! | TAGATGTCTTGCTGTCTTCA+GGG | - | chr8.4:23600621-23600640 | None:intergenic | 40.0% |
| ! | TATCCTCATCAACTGCCTTT+TGG | - | chr8.4:23597991-23598010 | None:intergenic | 40.0% |
| ! | TTAGATGTCTTGCTGTCTTC+AGG | - | chr8.4:23600622-23600641 | None:intergenic | 40.0% |
| ! | TTGATAGTATTCTCCTGGAG+TGG | + | chr8.4:23599308-23599327 | MS.gene011577:intron | 40.0% |
| ! | TTTCTCTGCTTCTTCTGAAG+AGG | + | chr8.4:23598793-23598812 | MS.gene011577:CDS | 40.0% |
| !! | AATTCTAGCTTGGTTGCTCA+AGG | + | chr8.4:23601455-23601474 | MS.gene011577:CDS | 40.0% |
| !! | ACAGCTAGAACTTTGAAGCA+AGG | - | chr8.4:23598325-23598344 | None:intergenic | 40.0% |
| AAAGTGGTGTGCCTATTGCA+AGG | - | chr8.4:23597712-23597731 | None:intergenic | 45.0% | |
| AAGGACAATGCTGCCATGAT+CGG | - | chr8.4:23598150-23598169 | None:intergenic | 45.0% | |
| ACACTGCTGCAAACCATGTT+AGG | - | chr8.4:23599680-23599699 | None:intergenic | 45.0% | |
| ACCGATGCTAGTGATTTGAC+AGG | + | chr8.4:23598076-23598095 | MS.gene011577:CDS | 45.0% | |
| ATGCTTATGCTGCATCTGGA+TGG | + | chr8.4:23597939-23597958 | MS.gene011577:CDS | 45.0% | |
| CAACAATGAGGAGTCCCAAA+AGG | + | chr8.4:23601231-23601250 | MS.gene011577:CDS | 45.0% | |
| CACTGCGAGGAAATGCAAAT+AGG | - | chr8.4:23601322-23601341 | None:intergenic | 45.0% | |
| CAGAAAGGTGGAAACAAAGC+TGG | + | chr8.4:23600916-23600935 | MS.gene011577:intron | 45.0% | |
| CCCATGCTTAGTGATTACAC+TGG | + | chr8.4:23598989-23599008 | MS.gene011577:CDS | 45.0% | |
| CCTATCTCAACAGAGACCAT+CGG | - | chr8.4:23598842-23598861 | None:intergenic | 45.0% | |
| CGAGTATACTGAGCTACTAC+TGG | - | chr8.4:23601486-23601505 | None:intergenic | 45.0% | |
| CGCAACATTACTTGATGCCA+CGG | - | chr8.4:23600968-23600987 | None:intergenic | 45.0% | |
| CGGTACAATACACCAAATGG+TGG | + | chr8.4:23600098-23600117 | MS.gene011577:intron | 45.0% | |
| CTATTTGCATTTCCTCGCAG+TGG | + | chr8.4:23601320-23601339 | MS.gene011577:CDS | 45.0% | |
| CTCGTAAGTACGACAATGCT+TGG | - | chr8.4:23597342-23597361 | None:intergenic | 45.0% | |
| CTCTGATCCTCAAAATCGAC+AGG | - | chr8.4:23597842-23597861 | None:intergenic | 45.0% | |
| GAAAGCTGCGTTCAATTTGG+CGG | + | chr8.4:23598052-23598071 | MS.gene011577:CDS | 45.0% | |
| GCATTACTCTTGGGACTTTC+TGG | + | chr8.4:23599767-23599786 | MS.gene011577:intron | 45.0% | |
| GCCAGTGTAATCACTAAGCA+TGG | - | chr8.4:23598993-23599012 | None:intergenic | 45.0% | |
| GGCATGAATTTCTCTTCGCA+GGG | + | chr8.4:23599010-23599029 | MS.gene011577:CDS | 45.0% | |
| GGTCGGTACAATACACCAAA+TGG | + | chr8.4:23600095-23600114 | MS.gene011577:intron | 45.0% | |
| GTCTCTGTTGAGATAGGACA+TGG | + | chr8.4:23598845-23598864 | MS.gene011577:CDS | 45.0% | |
| GTGATAGTAAAAGCTGGCAC+TGG | + | chr8.4:23601254-23601273 | MS.gene011577:CDS | 45.0% | |
| TAAGATCCTTGTACCACTCC+AGG | - | chr8.4:23599324-23599343 | None:intergenic | 45.0% | |
| TATTCTCCTGGAGTGGTACA+AGG | + | chr8.4:23599315-23599334 | MS.gene011577:intron | 45.0% | |
| TCCTTCTCAGTCAGTAGTCT+GGG | + | chr8.4:23598658-23598677 | MS.gene011577:CDS | 45.0% | |
| TGCTGCACATACAACAATGC+CGG | - | chr8.4:23600498-23600517 | None:intergenic | 45.0% | |
| TGGCATGAATTTCTCTTCGC+AGG | + | chr8.4:23599009-23599028 | MS.gene011577:CDS | 45.0% | |
| TTGCAATAGGCACACCACTT+TGG | + | chr8.4:23597711-23597730 | MS.gene011577:intron | 45.0% | |
| ! | AAGTTTGAAGCGCACACCAA+CGG | - | chr8.4:23597241-23597260 | None:intergenic | 45.0% |
| ! | ATAGTAAAAGCTGGCACTGG+CGG | + | chr8.4:23601257-23601276 | MS.gene011577:CDS | 45.0% |
| ! | CATAAAATTGGCTTCTCGGG+TGG | - | chr8.4:23597746-23597765 | None:intergenic | 45.0% |
| ! | CATAGCAACGACCTTTTGCA+AGG | - | chr8.4:23597437-23597456 | None:intergenic | 45.0% |
| ! | TGGTTTGCAGCAGTGTTGTT+TGG | + | chr8.4:23599684-23599703 | MS.gene011577:intron | 45.0% |
| !!! | GACAGATCCTGTCGATTTTG+AGG | + | chr8.4:23597832-23597851 | MS.gene011577:CDS | 45.0% |
| ACATTACTTGATGCCACGGC+AGG | - | chr8.4:23600964-23600983 | None:intergenic | 50.0% | |
| AGTTGCTCCTGTTGCAGTCT+TGG | - | chr8.4:23599064-23599083 | None:intergenic | 50.0% | |
| ATGCATGTGGATCTCGATGG+AGG | + | chr8.4:23597768-23597787 | MS.gene011577:CDS | 50.0% | |
| CCAAGCTAGAATTTGGGAGC+AGG | - | chr8.4:23601448-23601467 | None:intergenic | 50.0% | |
| CCGATGGTCTCTGTTGAGAT+AGG | + | chr8.4:23598839-23598858 | MS.gene011577:CDS | 50.0% | |
| CTTCTACGAGTGCAGAAAGG+TGG | + | chr8.4:23600904-23600923 | MS.gene011577:intron | 50.0% | |
| GCAAAGGTCAGAAACTCTGC+TGG | + | chr8.4:23599037-23599056 | MS.gene011577:CDS | 50.0% | |
| GCAATGCATGTGGATCTCGA+TGG | + | chr8.4:23597765-23597784 | MS.gene011577:CDS | 50.0% | |
| GGATCTCGATGGAGGACAAA+GGG | + | chr8.4:23597776-23597795 | MS.gene011577:CDS | 50.0% | |
| GGATCTGTCCGAGCATGTAA+AGG | - | chr8.4:23597821-23597840 | None:intergenic | 50.0% | |
| GTCCTTCTCAGTCAGTAGTC+TGG | + | chr8.4:23598657-23598676 | MS.gene011577:CDS | 50.0% | |
| GTTGCTCCTGTTGCAGTCTT+GGG | - | chr8.4:23599063-23599082 | None:intergenic | 50.0% | |
| TCGTCGTGAGCTATAGAGCT+AGG | - | chr8.4:23598890-23598909 | None:intergenic | 50.0% | |
| TGATATGGAATCTCCTGCCG+TGG | + | chr8.4:23600948-23600967 | MS.gene011577:CDS | 50.0% | |
| TGCAACAGGAGCAACTTGTG+AGG | + | chr8.4:23599068-23599087 | MS.gene011577:CDS | 50.0% | |
| TGGATCTCGATGGAGGACAA+AGG | + | chr8.4:23597775-23597794 | MS.gene011577:CDS | 50.0% | |
| TTTGCATTTCCTCGCAGTGG+TGG | + | chr8.4:23601323-23601342 | MS.gene011577:CDS | 50.0% | |
| ! | CCTGCTCCCAAATTCTAGCT+TGG | + | chr8.4:23601445-23601464 | MS.gene011577:CDS | 50.0% |
| ! | CGTTGATGAGAGTTCGGATC+AGG | + | chr8.4:23601373-23601392 | MS.gene011577:CDS | 50.0% |
| ! | GTCAGTAGTCTGGGATACTG+CGG | + | chr8.4:23598667-23598686 | MS.gene011577:CDS | 50.0% |
| ! | TCCCAGACTACTGACTGAGA+AGG | - | chr8.4:23598662-23598681 | None:intergenic | 50.0% |
| AACCCGTTGCACTCATACGC+AGG | - | chr8.4:23600139-23600158 | None:intergenic | 55.0% | |
| ACCCGTTGCACTCATACGCA+GGG | - | chr8.4:23600138-23600157 | None:intergenic | 55.0% | |
| ACCCTGCGTATGAGTGCAAC+GGG | + | chr8.4:23600134-23600153 | MS.gene011577:intron | 55.0% | |
| AGCTCACGACGAAGAGTCTG+AGG | + | chr8.4:23598898-23598917 | MS.gene011577:CDS | 55.0% | |
| ATGTGCAAACCACCACTGCG+AGG | - | chr8.4:23601335-23601354 | None:intergenic | 55.0% | |
| CTCTTCGCAGGGAGTTGCAA+AGG | + | chr8.4:23599021-23599040 | MS.gene011577:CDS | 55.0% | |
| CTGCGGCGCCTTCAAAAAAG+AGG | + | chr8.4:23598684-23598703 | MS.gene011577:CDS | 55.0% | |
| GACCCTGCGTATGAGTGCAA+CGG | + | chr8.4:23600133-23600152 | MS.gene011577:intron | 55.0% | |
| GCACACCACTTTGGCGTAAC+GGG | + | chr8.4:23597720-23597739 | MS.gene011577:CDS | 55.0% | |
| GGCACACCACTTTGGCGTAA+CGG | + | chr8.4:23597719-23597738 | MS.gene011577:intron | 55.0% | |
| GGCGGCAAAGAAGCTGTAGA+TGG | + | chr8.4:23601275-23601294 | MS.gene011577:CDS | 55.0% | |
| TTGCACTCATACGCAGGGTC+CGG | - | chr8.4:23600133-23600152 | None:intergenic | 55.0% | |
| ! | CAGTGGTGGTTTGCACATGC+TGG | + | chr8.4:23601337-23601356 | MS.gene011577:CDS | 55.0% |
| TCATACGCAGGGTCCGGGAA+GGG | - | chr8.4:23600127-23600146 | None:intergenic | 60.0% | |
| TGCACTCATACGCAGGGTCC+GGG | - | chr8.4:23600132-23600151 | None:intergenic | 60.0% | |
| TGCTGGCCCAAGACTGCAAC+AGG | + | chr8.4:23599054-23599073 | MS.gene011577:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8.4:23600111-23600130 | MS.gene011577:intron | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr8.4:23600126-23600145 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr8.4:23600113-23600132 | None:intergenic | 65.0% | |
| CTCATACGCAGGGTCCGGGA+AGG | - | chr8.4:23600128-23600147 | None:intergenic | 65.0% | |
| GGGAGCAGGAGTTCTGCCTG+TGG | - | chr8.4:23601434-23601453 | None:intergenic | 65.0% | |
| GGTGGCCCGTTACGCCAAAG+TGG | - | chr8.4:23597728-23597747 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 23597223 | 23601523 | 23597223 | ID=MS.gene011577 |
| chr8.4 | mRNA | 23597223 | 23601523 | 23597223 | ID=MS.gene011577.t1;Parent=MS.gene011577 |
| chr8.4 | exon | 23597223 | 23597277 | 23597223 | ID=MS.gene011577.t1.exon1;Parent=MS.gene011577.t1 |
| chr8.4 | CDS | 23597223 | 23597277 | 23597223 | ID=cds.MS.gene011577.t1;Parent=MS.gene011577.t1 |
| chr8.4 | exon | 23597720 | 23598097 | 23597720 | ID=MS.gene011577.t1.exon2;Parent=MS.gene011577.t1 |
| chr8.4 | CDS | 23597720 | 23598097 | 23597720 | ID=cds.MS.gene011577.t1;Parent=MS.gene011577.t1 |
| chr8.4 | exon | 23598657 | 23599089 | 23598657 | ID=MS.gene011577.t1.exon3;Parent=MS.gene011577.t1 |
| chr8.4 | CDS | 23598657 | 23599089 | 23598657 | ID=cds.MS.gene011577.t1;Parent=MS.gene011577.t1 |
| chr8.4 | exon | 23599480 | 23599552 | 23599480 | ID=MS.gene011577.t1.exon4;Parent=MS.gene011577.t1 |
| chr8.4 | CDS | 23599480 | 23599552 | 23599480 | ID=cds.MS.gene011577.t1;Parent=MS.gene011577.t1 |
| chr8.4 | exon | 23600250 | 23600353 | 23600250 | ID=MS.gene011577.t1.exon5;Parent=MS.gene011577.t1 |
| chr8.4 | CDS | 23600250 | 23600353 | 23600250 | ID=cds.MS.gene011577.t1;Parent=MS.gene011577.t1 |
| chr8.4 | exon | 23600516 | 23600702 | 23600516 | ID=MS.gene011577.t1.exon6;Parent=MS.gene011577.t1 |
| chr8.4 | CDS | 23600516 | 23600702 | 23600516 | ID=cds.MS.gene011577.t1;Parent=MS.gene011577.t1 |
| chr8.4 | exon | 23600919 | 23601030 | 23600919 | ID=MS.gene011577.t1.exon7;Parent=MS.gene011577.t1 |
| chr8.4 | CDS | 23600919 | 23601030 | 23600919 | ID=cds.MS.gene011577.t1;Parent=MS.gene011577.t1 |
| chr8.4 | exon | 23601222 | 23601523 | 23601222 | ID=MS.gene011577.t1.exon8;Parent=MS.gene011577.t1 |
| chr8.4 | CDS | 23601222 | 23601523 | 23601222 | ID=cds.MS.gene011577.t1;Parent=MS.gene011577.t1 |
| Gene Sequence |
| Protein sequence |
