Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011645.t1 | XP_003608633.1 | 96.6 | 319 | 10 | 1 | 1 | 319 | 1 | 318 | 3.70E-178 | 634 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011645.t1 | O49697 | 62.0 | 245 | 81 | 4 | 3 | 243 | 2 | 238 | 2.6e-79 | 297.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011645.t1 | G7JGH7 | 96.6 | 319 | 10 | 1 | 1 | 319 | 1 | 318 | 2.7e-178 | 634.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene011645.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011645.t1 | MTR_4g098630 | 96.552 | 319 | 10 | 1 | 1 | 319 | 1 | 318 | 0.0 | 638 |
MS.gene011645.t1 | MTR_5g014300 | 61.047 | 344 | 97 | 9 | 3 | 319 | 2 | 335 | 1.12e-134 | 385 |
MS.gene011645.t1 | MTR_6g477900 | 64.516 | 155 | 52 | 1 | 7 | 161 | 6 | 157 | 1.09e-67 | 212 |
MS.gene011645.t1 | MTR_5g076850 | 61.688 | 154 | 56 | 1 | 7 | 160 | 6 | 156 | 2.86e-62 | 209 |
MS.gene011645.t1 | MTR_2g064090 | 59.494 | 158 | 60 | 2 | 5 | 161 | 4 | 158 | 3.29e-62 | 201 |
MS.gene011645.t1 | MTR_3g064580 | 53.191 | 188 | 73 | 4 | 7 | 192 | 6 | 180 | 7.35e-62 | 208 |
MS.gene011645.t1 | MTR_5g021710 | 45.000 | 200 | 98 | 5 | 7 | 205 | 8 | 196 | 1.19e-51 | 174 |
MS.gene011645.t1 | MTR_1g097300 | 55.921 | 152 | 64 | 1 | 9 | 160 | 21 | 169 | 3.08e-51 | 178 |
MS.gene011645.t1 | MTR_1g096430 | 49.701 | 167 | 78 | 3 | 1 | 166 | 1 | 162 | 2.26e-50 | 170 |
MS.gene011645.t1 | MTR_3g093040 | 51.534 | 163 | 74 | 3 | 7 | 168 | 108 | 266 | 3.60e-49 | 166 |
MS.gene011645.t1 | MTR_8g076110 | 50.000 | 156 | 72 | 3 | 7 | 161 | 6 | 156 | 5.03e-49 | 166 |
MS.gene011645.t1 | MTR_5g069030 | 55.346 | 159 | 66 | 3 | 7 | 164 | 25 | 179 | 5.19e-49 | 173 |
MS.gene011645.t1 | MTR_4g101680 | 51.613 | 155 | 69 | 3 | 7 | 160 | 7 | 156 | 1.01e-48 | 167 |
MS.gene011645.t1 | MTR_3g096140 | 48.447 | 161 | 80 | 1 | 6 | 166 | 6 | 163 | 1.02e-48 | 164 |
MS.gene011645.t1 | MTR_8g094580 | 39.916 | 238 | 123 | 6 | 1 | 229 | 1 | 227 | 1.07e-48 | 164 |
MS.gene011645.t1 | MTR_4g036030 | 49.123 | 171 | 76 | 4 | 7 | 176 | 7 | 167 | 1.13e-48 | 166 |
MS.gene011645.t1 | MTR_3g093050 | 53.374 | 163 | 71 | 3 | 7 | 168 | 22 | 180 | 1.30e-48 | 171 |
MS.gene011645.t1 | MTR_2g062730 | 49.398 | 166 | 75 | 4 | 3 | 165 | 6 | 165 | 2.56e-48 | 165 |
MS.gene011645.t1 | MTR_3g093050 | 53.374 | 163 | 71 | 3 | 7 | 168 | 22 | 180 | 3.16e-48 | 171 |
MS.gene011645.t1 | MTR_5g012080 | 43.367 | 196 | 94 | 5 | 7 | 197 | 7 | 190 | 5.88e-48 | 164 |
MS.gene011645.t1 | MTR_2g086880 | 46.193 | 197 | 87 | 6 | 9 | 200 | 20 | 202 | 6.47e-48 | 168 |
MS.gene011645.t1 | MTR_3g096140 | 34.405 | 311 | 177 | 8 | 6 | 310 | 6 | 295 | 8.34e-48 | 164 |
MS.gene011645.t1 | MTR_7g085220 | 45.304 | 181 | 83 | 4 | 7 | 177 | 8 | 182 | 1.08e-47 | 163 |
MS.gene011645.t1 | MTR_3g096920 | 48.276 | 174 | 81 | 3 | 1 | 171 | 1 | 168 | 1.24e-47 | 162 |
MS.gene011645.t1 | MTR_1g090723 | 52.500 | 160 | 72 | 3 | 2 | 160 | 3 | 159 | 1.42e-47 | 169 |
MS.gene011645.t1 | MTR_8g063550 | 48.125 | 160 | 80 | 1 | 7 | 166 | 6 | 162 | 1.47e-47 | 163 |
MS.gene011645.t1 | MTR_2g086880 | 46.193 | 197 | 87 | 6 | 9 | 200 | 20 | 202 | 1.86e-47 | 168 |
MS.gene011645.t1 | MTR_3g435150 | 47.647 | 170 | 82 | 3 | 5 | 172 | 14 | 178 | 2.02e-47 | 162 |
MS.gene011645.t1 | MTR_2g079990 | 45.810 | 179 | 92 | 2 | 5 | 183 | 14 | 187 | 2.06e-47 | 163 |
MS.gene011645.t1 | MTR_4g108760 | 47.619 | 168 | 81 | 3 | 7 | 172 | 17 | 179 | 2.96e-47 | 163 |
MS.gene011645.t1 | MTR_4g134460 | 51.613 | 155 | 69 | 3 | 6 | 160 | 53 | 201 | 6.49e-47 | 164 |
MS.gene011645.t1 | MTR_8g063550 | 48.125 | 160 | 80 | 1 | 7 | 166 | 6 | 162 | 8.99e-47 | 163 |
MS.gene011645.t1 | MTR_4g035590 | 51.613 | 155 | 68 | 3 | 7 | 160 | 8 | 156 | 9.08e-47 | 161 |
MS.gene011645.t1 | MTR_8g063550 | 48.125 | 160 | 80 | 1 | 7 | 166 | 6 | 162 | 9.13e-47 | 164 |
MS.gene011645.t1 | MTR_2g080010 | 47.879 | 165 | 72 | 4 | 7 | 160 | 15 | 176 | 1.26e-46 | 161 |
MS.gene011645.t1 | MTR_2g093810 | 46.067 | 178 | 87 | 4 | 7 | 179 | 14 | 187 | 1.62e-46 | 160 |
MS.gene011645.t1 | MTR_3g096920 | 55.396 | 139 | 56 | 2 | 1 | 139 | 1 | 133 | 4.44e-46 | 159 |
MS.gene011645.t1 | MTR_1g090723 | 51.553 | 161 | 73 | 4 | 2 | 161 | 3 | 159 | 5.32e-46 | 164 |
MS.gene011645.t1 | MTR_7g005280 | 49.367 | 158 | 72 | 3 | 3 | 160 | 11 | 160 | 5.33e-46 | 156 |
MS.gene011645.t1 | MTR_1g090723 | 51.875 | 160 | 72 | 4 | 2 | 160 | 3 | 158 | 5.70e-46 | 164 |
MS.gene011645.t1 | MTR_4g089135 | 53.191 | 141 | 63 | 2 | 7 | 147 | 15 | 152 | 1.14e-45 | 158 |
MS.gene011645.t1 | MTR_3g088110 | 45.556 | 180 | 89 | 3 | 1 | 177 | 1 | 174 | 1.54e-45 | 156 |
MS.gene011645.t1 | MTR_8g024480 | 42.051 | 195 | 96 | 4 | 1 | 183 | 9 | 198 | 3.02e-45 | 159 |
MS.gene011645.t1 | MTR_4g081870 | 48.795 | 166 | 74 | 4 | 7 | 167 | 9 | 168 | 5.46e-45 | 154 |
MS.gene011645.t1 | MTR_6g084430 | 43.678 | 174 | 85 | 4 | 7 | 177 | 5 | 168 | 6.08e-45 | 155 |
MS.gene011645.t1 | MTR_8g059170 | 50.909 | 165 | 72 | 4 | 5 | 166 | 12 | 170 | 6.22e-45 | 156 |
MS.gene011645.t1 | MTR_5g041940 | 47.953 | 171 | 78 | 4 | 5 | 170 | 1 | 165 | 1.48e-44 | 153 |
MS.gene011645.t1 | MTR_5g040420 | 42.157 | 204 | 106 | 5 | 6 | 200 | 13 | 213 | 1.77e-44 | 156 |
MS.gene011645.t1 | MTR_2g078700 | 55.725 | 131 | 55 | 2 | 7 | 137 | 23 | 150 | 1.79e-44 | 156 |
MS.gene011645.t1 | MTR_0036s0150 | 50.625 | 160 | 72 | 5 | 4 | 161 | 2 | 156 | 1.84e-44 | 159 |
MS.gene011645.t1 | MTR_7g100990 | 38.767 | 227 | 128 | 5 | 5 | 224 | 9 | 231 | 3.10e-44 | 154 |
MS.gene011645.t1 | MTR_2157s0010 | 45.122 | 164 | 79 | 2 | 7 | 161 | 8 | 169 | 4.03e-44 | 152 |
MS.gene011645.t1 | MTR_8g467490 | 45.402 | 174 | 83 | 4 | 6 | 170 | 13 | 183 | 4.05e-44 | 155 |
MS.gene011645.t1 | MTR_6g012670 | 47.853 | 163 | 78 | 3 | 7 | 167 | 20 | 177 | 4.69e-44 | 153 |
MS.gene011645.t1 | MTR_1g008740 | 40.376 | 213 | 108 | 7 | 7 | 212 | 13 | 213 | 7.47e-44 | 154 |
MS.gene011645.t1 | MTR_3g109340 | 40.845 | 213 | 119 | 4 | 7 | 217 | 22 | 229 | 8.77e-44 | 154 |
MS.gene011645.t1 | MTR_8g093580 | 45.625 | 160 | 84 | 1 | 7 | 166 | 6 | 162 | 1.04e-43 | 156 |
MS.gene011645.t1 | MTR_1g008740 | 40.376 | 213 | 108 | 7 | 7 | 212 | 27 | 227 | 1.34e-43 | 153 |
MS.gene011645.t1 | MTR_2g079990 | 54.815 | 135 | 56 | 2 | 5 | 139 | 14 | 143 | 1.62e-43 | 154 |
MS.gene011645.t1 | MTR_3g070030 | 45.562 | 169 | 84 | 4 | 5 | 170 | 17 | 180 | 1.71e-43 | 152 |
MS.gene011645.t1 | MTR_1g090720 | 51.553 | 161 | 69 | 2 | 7 | 161 | 42 | 199 | 1.91e-43 | 155 |
MS.gene011645.t1 | MTR_3g109340 | 40.367 | 218 | 114 | 5 | 7 | 217 | 22 | 230 | 2.44e-43 | 152 |
MS.gene011645.t1 | MTR_6g011860 | 47.853 | 163 | 72 | 3 | 7 | 160 | 15 | 173 | 2.57e-43 | 153 |
MS.gene011645.t1 | MTR_6g032770 | 50.725 | 138 | 65 | 2 | 5 | 142 | 16 | 150 | 4.22e-43 | 152 |
MS.gene011645.t1 | MTR_7g085260 | 44.444 | 171 | 90 | 3 | 4 | 171 | 14 | 182 | 2.17e-42 | 150 |
MS.gene011645.t1 | MTR_3g116070 | 54.545 | 132 | 56 | 3 | 7 | 137 | 23 | 151 | 1.35e-41 | 148 |
MS.gene011645.t1 | MTR_4g075980 | 48.684 | 152 | 71 | 3 | 9 | 160 | 17 | 161 | 1.12e-40 | 144 |
MS.gene011645.t1 | MTR_2g068920 | 36.864 | 236 | 120 | 8 | 9 | 222 | 23 | 251 | 3.38e-40 | 142 |
MS.gene011645.t1 | MTR_7g011120 | 51.562 | 128 | 57 | 2 | 10 | 137 | 11 | 133 | 2.23e-39 | 141 |
MS.gene011645.t1 | MTR_2g068880 | 39.234 | 209 | 104 | 6 | 9 | 195 | 24 | 231 | 2.27e-39 | 141 |
MS.gene011645.t1 | MTR_1g069805 | 39.048 | 210 | 101 | 5 | 7 | 198 | 10 | 210 | 2.95e-39 | 139 |
MS.gene011645.t1 | MTR_5g090970 | 37.619 | 210 | 108 | 4 | 6 | 201 | 17 | 217 | 3.13e-39 | 140 |
MS.gene011645.t1 | MTR_7g011130 | 51.562 | 128 | 57 | 2 | 10 | 137 | 22 | 144 | 5.99e-39 | 140 |
MS.gene011645.t1 | MTR_5g090970 | 37.619 | 210 | 107 | 4 | 6 | 201 | 17 | 216 | 1.97e-38 | 138 |
MS.gene011645.t1 | MTR_2g064470 | 47.590 | 166 | 72 | 6 | 7 | 169 | 11 | 164 | 2.20e-38 | 138 |
MS.gene011645.t1 | MTR_3g096140 | 31.973 | 294 | 173 | 8 | 23 | 310 | 2 | 274 | 6.17e-38 | 137 |
MS.gene011645.t1 | MTR_7g097090 | 47.712 | 153 | 69 | 4 | 7 | 157 | 10 | 153 | 9.58e-38 | 136 |
MS.gene011645.t1 | MTR_8g023840 | 52.672 | 131 | 59 | 3 | 7 | 136 | 11 | 139 | 4.00e-37 | 137 |
MS.gene011645.t1 | MTR_8g099750 | 43.333 | 180 | 85 | 5 | 3 | 173 | 10 | 181 | 6.54e-36 | 129 |
MS.gene011645.t1 | MTR_8g023900 | 45.000 | 160 | 76 | 5 | 7 | 162 | 12 | 163 | 2.32e-35 | 133 |
MS.gene011645.t1 | MTR_8g023900 | 38.498 | 213 | 121 | 6 | 5 | 214 | 191 | 396 | 5.52e-32 | 124 |
MS.gene011645.t1 | MTR_3g070040 | 43.750 | 160 | 78 | 5 | 11 | 166 | 12 | 163 | 5.33e-34 | 127 |
MS.gene011645.t1 | MTR_8g023860 | 45.752 | 153 | 75 | 5 | 7 | 158 | 12 | 157 | 9.48e-34 | 128 |
MS.gene011645.t1 | MTR_8g023930 | 38.049 | 205 | 110 | 6 | 6 | 209 | 23 | 211 | 1.34e-33 | 129 |
MS.gene011645.t1 | MTR_3g098810 | 44.242 | 165 | 81 | 4 | 3 | 160 | 10 | 170 | 3.44e-33 | 122 |
MS.gene011645.t1 | MTR_2g086690 | 42.767 | 159 | 78 | 6 | 8 | 157 | 5 | 159 | 1.27e-32 | 121 |
MS.gene011645.t1 | MTR_4g052620 | 41.772 | 158 | 84 | 5 | 6 | 157 | 4 | 159 | 1.54e-32 | 121 |
MS.gene011645.t1 | MTR_3g098810 | 47.445 | 137 | 67 | 2 | 3 | 138 | 10 | 142 | 2.96e-32 | 118 |
MS.gene011645.t1 | MTR_7g105170 | 34.746 | 236 | 115 | 10 | 7 | 206 | 4 | 236 | 1.09e-31 | 119 |
MS.gene011645.t1 | MTR_4g094302 | 46.565 | 131 | 59 | 3 | 7 | 137 | 11 | 130 | 1.14e-31 | 116 |
MS.gene011645.t1 | MTR_4g094302 | 46.565 | 131 | 59 | 3 | 7 | 137 | 11 | 130 | 5.33e-31 | 115 |
MS.gene011645.t1 | MTR_8g023880 | 37.629 | 194 | 95 | 6 | 1 | 179 | 1 | 183 | 1.83e-28 | 111 |
MS.gene011645.t1 | MTR_8g094580 | 33.714 | 175 | 98 | 5 | 64 | 229 | 8 | 173 | 3.80e-22 | 93.2 |
MS.gene011645.t1 | MTR_7g070140 | 46.914 | 81 | 42 | 1 | 57 | 137 | 12 | 91 | 1.27e-19 | 84.0 |
MS.gene011645.t1 | MTR_8g093790 | 33.514 | 185 | 98 | 7 | 2 | 186 | 5 | 164 | 1.68e-17 | 79.3 |
MS.gene011645.t1 | MTR_1g087190 | 58.824 | 51 | 20 | 1 | 4 | 53 | 2 | 52 | 3.89e-13 | 63.5 |
MS.gene011645.t1 | MTR_3g096400 | 29.885 | 174 | 99 | 6 | 1 | 161 | 1 | 164 | 5.92e-13 | 67.4 |
MS.gene011645.t1 | MTR_7g083330 | 26.804 | 194 | 120 | 5 | 2 | 190 | 13 | 189 | 7.64e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011645.t1 | AT4G17980 | 54.849 | 299 | 120 | 7 | 3 | 297 | 2 | 289 | 3.27e-100 | 296 |
MS.gene011645.t1 | AT4G17980 | 61.633 | 245 | 82 | 4 | 3 | 243 | 2 | 238 | 1.42e-98 | 291 |
MS.gene011645.t1 | AT5G46590 | 52.189 | 297 | 131 | 5 | 3 | 297 | 2 | 289 | 4.18e-96 | 286 |
MS.gene011645.t1 | AT5G46590 | 50.000 | 296 | 128 | 5 | 3 | 297 | 2 | 278 | 2.56e-90 | 271 |
MS.gene011645.t1 | AT1G32510 | 60.262 | 229 | 71 | 5 | 6 | 228 | 5 | 219 | 1.45e-82 | 251 |
MS.gene011645.t1 | AT3G17730 | 56.983 | 179 | 68 | 2 | 7 | 179 | 6 | 181 | 3.13e-66 | 208 |
MS.gene011645.t1 | AT1G54330 | 65.806 | 155 | 47 | 2 | 7 | 161 | 6 | 154 | 4.19e-65 | 207 |
MS.gene011645.t1 | AT1G65910 | 60.870 | 161 | 60 | 1 | 7 | 167 | 6 | 163 | 2.41e-64 | 214 |
MS.gene011645.t1 | AT3G03200 | 61.935 | 155 | 55 | 2 | 7 | 160 | 6 | 157 | 4.26e-62 | 205 |
MS.gene011645.t1 | AT5G17260 | 60.645 | 155 | 57 | 2 | 7 | 160 | 6 | 157 | 6.36e-62 | 204 |
MS.gene011645.t1 | AT3G10500 | 54.194 | 155 | 68 | 1 | 7 | 161 | 9 | 160 | 1.28e-52 | 181 |
MS.gene011645.t1 | AT5G04410 | 54.839 | 155 | 67 | 1 | 7 | 161 | 9 | 160 | 1.26e-51 | 179 |
MS.gene011645.t1 | AT1G33060 | 53.988 | 163 | 68 | 2 | 2 | 160 | 15 | 174 | 2.98e-50 | 177 |
MS.gene011645.t1 | AT1G33060 | 53.988 | 163 | 68 | 2 | 2 | 160 | 15 | 174 | 3.42e-50 | 176 |
MS.gene011645.t1 | AT1G12260 | 46.500 | 200 | 92 | 6 | 7 | 201 | 7 | 196 | 4.95e-50 | 169 |
MS.gene011645.t1 | AT5G22290 | 51.235 | 162 | 68 | 5 | 1 | 162 | 16 | 166 | 5.76e-50 | 169 |
MS.gene011645.t1 | AT3G10490 | 53.459 | 159 | 70 | 2 | 4 | 161 | 24 | 179 | 6.17e-50 | 166 |
MS.gene011645.t1 | AT1G71930 | 43.979 | 191 | 96 | 4 | 7 | 191 | 9 | 194 | 6.69e-50 | 169 |
MS.gene011645.t1 | AT1G71930 | 43.979 | 191 | 96 | 4 | 7 | 191 | 9 | 194 | 6.69e-50 | 169 |
MS.gene011645.t1 | AT4G35580 | 56.774 | 155 | 62 | 3 | 7 | 160 | 9 | 159 | 8.05e-50 | 174 |
MS.gene011645.t1 | AT4G35580 | 56.774 | 155 | 62 | 3 | 7 | 160 | 9 | 159 | 8.20e-50 | 173 |
MS.gene011645.t1 | AT4G36160 | 52.258 | 155 | 68 | 3 | 7 | 160 | 10 | 159 | 8.81e-50 | 170 |
MS.gene011645.t1 | AT4G36160 | 52.258 | 155 | 68 | 3 | 7 | 160 | 10 | 159 | 8.81e-50 | 170 |
MS.gene011645.t1 | AT4G35580 | 56.774 | 155 | 62 | 3 | 7 | 160 | 9 | 159 | 9.18e-50 | 173 |
MS.gene011645.t1 | AT4G36160 | 52.258 | 155 | 68 | 3 | 7 | 160 | 14 | 163 | 9.77e-50 | 170 |
MS.gene011645.t1 | AT5G07680 | 49.405 | 168 | 78 | 3 | 7 | 172 | 3 | 165 | 9.85e-50 | 168 |
MS.gene011645.t1 | AT1G12260 | 46.500 | 200 | 92 | 6 | 7 | 201 | 7 | 196 | 1.02e-49 | 170 |
MS.gene011645.t1 | AT3G44290 | 51.299 | 154 | 64 | 4 | 9 | 162 | 16 | 158 | 1.28e-49 | 165 |
MS.gene011645.t1 | AT5G07680 | 49.405 | 168 | 78 | 3 | 7 | 172 | 17 | 179 | 1.29e-49 | 168 |
MS.gene011645.t1 | AT3G49530 | 52.229 | 157 | 71 | 3 | 7 | 162 | 13 | 166 | 2.62e-49 | 169 |
MS.gene011645.t1 | AT2G18060 | 47.674 | 172 | 78 | 4 | 7 | 177 | 9 | 169 | 3.12e-49 | 168 |
MS.gene011645.t1 | AT2G18060 | 47.674 | 172 | 78 | 4 | 7 | 177 | 9 | 169 | 3.12e-49 | 168 |
MS.gene011645.t1 | AT3G49530 | 52.229 | 157 | 71 | 3 | 7 | 162 | 13 | 166 | 6.09e-49 | 170 |
MS.gene011645.t1 | AT3G10480 | 53.165 | 158 | 71 | 1 | 4 | 161 | 24 | 178 | 8.54e-49 | 169 |
MS.gene011645.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 8.82e-49 | 170 |
MS.gene011645.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 8.82e-49 | 170 |
MS.gene011645.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 8.82e-49 | 170 |
MS.gene011645.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 8.82e-49 | 170 |
MS.gene011645.t1 | AT5G09330 | 47.561 | 164 | 83 | 1 | 3 | 166 | 2 | 162 | 8.82e-49 | 170 |
MS.gene011645.t1 | AT3G10480 | 52.830 | 159 | 71 | 2 | 4 | 161 | 24 | 179 | 1.18e-48 | 169 |
MS.gene011645.t1 | AT5G66300 | 51.282 | 156 | 71 | 3 | 7 | 161 | 12 | 163 | 1.49e-48 | 164 |
MS.gene011645.t1 | AT3G10490 | 53.459 | 159 | 70 | 2 | 4 | 161 | 24 | 179 | 1.68e-48 | 168 |
MS.gene011645.t1 | AT3G44290 | 51.299 | 154 | 64 | 4 | 9 | 162 | 16 | 158 | 2.58e-48 | 165 |
MS.gene011645.t1 | AT1G62700 | 51.613 | 155 | 69 | 3 | 7 | 160 | 7 | 156 | 2.61e-48 | 166 |
MS.gene011645.t1 | AT1G62700 | 51.613 | 155 | 69 | 3 | 7 | 160 | 7 | 156 | 2.61e-48 | 166 |
MS.gene011645.t1 | AT4G27410 | 49.112 | 169 | 81 | 2 | 5 | 173 | 12 | 175 | 2.72e-48 | 164 |
MS.gene011645.t1 | AT5G61430 | 47.399 | 173 | 84 | 3 | 2 | 172 | 11 | 178 | 3.16e-48 | 165 |
MS.gene011645.t1 | AT2G02450 | 50.968 | 155 | 70 | 3 | 6 | 160 | 50 | 198 | 3.48e-48 | 166 |
MS.gene011645.t1 | AT2G02450 | 50.968 | 155 | 70 | 3 | 6 | 160 | 50 | 198 | 3.55e-48 | 167 |
MS.gene011645.t1 | AT5G64060 | 46.341 | 164 | 85 | 1 | 3 | 166 | 2 | 162 | 4.24e-48 | 165 |
MS.gene011645.t1 | AT1G32770 | 37.643 | 263 | 135 | 9 | 1 | 250 | 10 | 256 | 1.52e-47 | 164 |
MS.gene011645.t1 | AT5G62380 | 45.652 | 184 | 89 | 4 | 1 | 183 | 1 | 174 | 2.04e-47 | 163 |
MS.gene011645.t1 | AT5G62380 | 45.652 | 184 | 89 | 4 | 1 | 183 | 1 | 174 | 2.04e-47 | 163 |
MS.gene011645.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 4.84e-47 | 162 |
MS.gene011645.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 4.84e-47 | 162 |
MS.gene011645.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 4.84e-47 | 162 |
MS.gene011645.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 4.84e-47 | 162 |
MS.gene011645.t1 | AT1G79580 | 52.795 | 161 | 66 | 4 | 3 | 160 | 13 | 166 | 4.84e-47 | 162 |
MS.gene011645.t1 | AT5G24590 | 51.282 | 156 | 74 | 1 | 7 | 162 | 13 | 166 | 1.14e-46 | 163 |
MS.gene011645.t1 | AT3G61910 | 42.157 | 204 | 97 | 5 | 1 | 188 | 5 | 203 | 1.18e-46 | 160 |
MS.gene011645.t1 | AT2G24430 | 35.548 | 301 | 161 | 8 | 7 | 283 | 16 | 307 | 1.34e-46 | 160 |
MS.gene011645.t1 | AT2G24430 | 35.548 | 301 | 161 | 8 | 7 | 283 | 16 | 307 | 1.34e-46 | 160 |
MS.gene011645.t1 | AT4G10350 | 50.289 | 173 | 74 | 6 | 7 | 173 | 9 | 175 | 1.42e-46 | 160 |
MS.gene011645.t1 | AT1G52890 | 45.556 | 180 | 91 | 3 | 5 | 184 | 12 | 184 | 1.77e-46 | 159 |
MS.gene011645.t1 | AT3G15500 | 47.024 | 168 | 84 | 2 | 5 | 172 | 12 | 174 | 2.26e-46 | 159 |
MS.gene011645.t1 | AT5G39610 | 46.893 | 177 | 81 | 4 | 2 | 173 | 15 | 183 | 2.73e-46 | 158 |
MS.gene011645.t1 | AT3G18400 | 47.826 | 161 | 78 | 3 | 7 | 167 | 5 | 159 | 3.97e-46 | 159 |
MS.gene011645.t1 | AT3G15170 | 43.721 | 215 | 104 | 5 | 6 | 215 | 19 | 221 | 5.98e-46 | 158 |
MS.gene011645.t1 | AT1G61110 | 48.538 | 171 | 72 | 5 | 7 | 165 | 16 | 182 | 6.07e-46 | 158 |
MS.gene011645.t1 | AT5G08790 | 40.164 | 244 | 127 | 6 | 1 | 238 | 1 | 231 | 6.28e-46 | 157 |
MS.gene011645.t1 | AT2G27300 | 50.327 | 153 | 65 | 4 | 7 | 159 | 14 | 155 | 1.20e-45 | 158 |
MS.gene011645.t1 | AT2G33480 | 50.943 | 159 | 68 | 3 | 2 | 160 | 10 | 158 | 1.24e-45 | 156 |
MS.gene011645.t1 | AT2G33480 | 51.875 | 160 | 67 | 4 | 2 | 160 | 10 | 160 | 2.13e-45 | 155 |
MS.gene011645.t1 | AT4G27410 | 46.196 | 184 | 81 | 3 | 5 | 173 | 12 | 192 | 4.15e-45 | 156 |
MS.gene011645.t1 | AT1G69490 | 49.390 | 164 | 72 | 4 | 7 | 165 | 9 | 166 | 5.69e-45 | 154 |
MS.gene011645.t1 | AT3G04070 | 48.503 | 167 | 75 | 4 | 7 | 164 | 10 | 174 | 6.33e-45 | 156 |
MS.gene011645.t1 | AT2G46770 | 42.714 | 199 | 82 | 6 | 1 | 178 | 10 | 197 | 6.93e-45 | 157 |
MS.gene011645.t1 | AT3G29035 | 46.821 | 173 | 79 | 3 | 7 | 179 | 24 | 183 | 7.95e-45 | 155 |
MS.gene011645.t1 | AT1G33280 | 49.677 | 155 | 71 | 4 | 7 | 160 | 8 | 156 | 8.90e-45 | 155 |
MS.gene011645.t1 | AT1G01720 | 47.953 | 171 | 77 | 4 | 1 | 166 | 1 | 164 | 2.57e-44 | 153 |
MS.gene011645.t1 | AT5G63790 | 43.655 | 197 | 98 | 4 | 1 | 192 | 44 | 232 | 5.85e-44 | 153 |
MS.gene011645.t1 | AT1G34190 | 53.957 | 139 | 61 | 1 | 2 | 140 | 11 | 146 | 6.17e-44 | 158 |
MS.gene011645.t1 | AT5G63790 | 43.655 | 197 | 98 | 4 | 1 | 192 | 54 | 242 | 6.49e-44 | 153 |
MS.gene011645.t1 | AT3G04070 | 52.899 | 138 | 61 | 2 | 7 | 142 | 10 | 145 | 8.92e-44 | 154 |
MS.gene011645.t1 | AT3G10480 | 44.792 | 192 | 69 | 3 | 4 | 161 | 24 | 212 | 1.22e-43 | 157 |
MS.gene011645.t1 | AT3G04060 | 46.386 | 166 | 83 | 3 | 7 | 170 | 20 | 181 | 1.32e-43 | 152 |
MS.gene011645.t1 | AT1G76420 | 48.765 | 162 | 79 | 3 | 7 | 168 | 22 | 179 | 1.33e-43 | 152 |
MS.gene011645.t1 | AT2G43000 | 48.366 | 153 | 73 | 3 | 9 | 160 | 20 | 167 | 2.94e-43 | 150 |
MS.gene011645.t1 | AT3G15510 | 45.238 | 168 | 78 | 4 | 11 | 167 | 21 | 185 | 1.35e-42 | 150 |
MS.gene011645.t1 | AT5G53950 | 52.941 | 136 | 61 | 2 | 7 | 142 | 17 | 149 | 3.49e-42 | 150 |
MS.gene011645.t1 | AT1G34180 | 50.658 | 152 | 72 | 1 | 9 | 160 | 18 | 166 | 3.88e-42 | 151 |
MS.gene011645.t1 | AT1G26870 | 41.129 | 248 | 119 | 9 | 1 | 226 | 12 | 254 | 4.03e-42 | 150 |
MS.gene011645.t1 | AT5G13180 | 54.074 | 135 | 56 | 2 | 3 | 137 | 10 | 138 | 9.83e-42 | 145 |
MS.gene011645.t1 | AT5G39820 | 52.273 | 132 | 60 | 2 | 6 | 137 | 19 | 147 | 1.00e-41 | 148 |
MS.gene011645.t1 | AT5G18270 | 46.951 | 164 | 73 | 4 | 7 | 164 | 21 | 176 | 1.01e-41 | 147 |
MS.gene011645.t1 | AT5G18270 | 46.341 | 164 | 74 | 4 | 7 | 164 | 21 | 176 | 1.82e-41 | 147 |
MS.gene011645.t1 | AT1G34180 | 50.658 | 152 | 72 | 1 | 9 | 160 | 18 | 166 | 1.89e-41 | 151 |
MS.gene011645.t1 | AT2G17040 | 44.737 | 152 | 77 | 2 | 9 | 160 | 8 | 152 | 4.78e-41 | 144 |
MS.gene011645.t1 | AT1G77450 | 40.887 | 203 | 104 | 5 | 5 | 201 | 8 | 200 | 1.00e-40 | 143 |
MS.gene011645.t1 | AT1G52880 | 47.239 | 163 | 75 | 4 | 11 | 164 | 21 | 181 | 1.84e-40 | 144 |
MS.gene011645.t1 | AT1G32870 | 58.779 | 131 | 49 | 2 | 7 | 137 | 10 | 135 | 1.31e-39 | 146 |
MS.gene011645.t1 | AT1G32870 | 58.779 | 131 | 49 | 2 | 7 | 137 | 10 | 135 | 1.46e-39 | 146 |
MS.gene011645.t1 | AT3G12977 | 46.154 | 156 | 78 | 3 | 7 | 161 | 18 | 168 | 2.21e-39 | 140 |
MS.gene011645.t1 | AT1G32870 | 58.779 | 131 | 49 | 2 | 7 | 137 | 46 | 171 | 2.78e-39 | 145 |
MS.gene011645.t1 | AT1G34180 | 46.951 | 164 | 72 | 2 | 9 | 160 | 18 | 178 | 6.12e-39 | 143 |
MS.gene011645.t1 | AT1G34180 | 46.951 | 164 | 72 | 2 | 9 | 160 | 18 | 178 | 1.89e-38 | 143 |
MS.gene011645.t1 | AT3G12910 | 38.462 | 221 | 103 | 7 | 2 | 194 | 17 | 232 | 2.83e-37 | 135 |
MS.gene011645.t1 | AT1G56010 | 45.963 | 161 | 74 | 5 | 7 | 161 | 19 | 172 | 3.50e-37 | 135 |
MS.gene011645.t1 | AT5G04395 | 46.154 | 143 | 66 | 1 | 7 | 138 | 28 | 170 | 9.04e-37 | 130 |
MS.gene011645.t1 | AT4G28530 | 43.503 | 177 | 71 | 6 | 7 | 164 | 10 | 176 | 1.00e-34 | 129 |
MS.gene011645.t1 | AT5G22380 | 36.000 | 200 | 107 | 6 | 10 | 190 | 8 | 205 | 4.46e-30 | 114 |
MS.gene011645.t1 | AT5G61430 | 49.550 | 111 | 51 | 2 | 64 | 172 | 8 | 115 | 1.22e-29 | 114 |
MS.gene011645.t1 | AT3G44350 | 33.649 | 211 | 122 | 8 | 7 | 202 | 5 | 212 | 7.01e-27 | 106 |
MS.gene011645.t1 | AT4G01550 | 38.636 | 176 | 101 | 4 | 10 | 184 | 7 | 176 | 8.68e-27 | 109 |
MS.gene011645.t1 | AT5G64530 | 43.609 | 133 | 60 | 4 | 7 | 139 | 3 | 120 | 1.33e-26 | 103 |
MS.gene011645.t1 | AT1G02230 | 33.908 | 174 | 104 | 5 | 5 | 176 | 1 | 165 | 2.18e-26 | 107 |
MS.gene011645.t1 | AT5G64530 | 43.609 | 133 | 60 | 4 | 7 | 139 | 3 | 120 | 3.50e-26 | 102 |
MS.gene011645.t1 | AT4G10350 | 52.212 | 113 | 47 | 4 | 64 | 173 | 20 | 128 | 5.97e-26 | 105 |
MS.gene011645.t1 | AT4G01520 | 35.000 | 160 | 97 | 3 | 8 | 165 | 5 | 159 | 2.76e-25 | 103 |
MS.gene011645.t1 | AT3G12977 | 50.505 | 99 | 45 | 2 | 64 | 161 | 20 | 115 | 7.56e-25 | 100 |
MS.gene011645.t1 | AT1G02250 | 37.126 | 167 | 95 | 5 | 8 | 171 | 4 | 163 | 4.02e-24 | 101 |
MS.gene011645.t1 | AT4G01540 | 34.810 | 158 | 96 | 3 | 10 | 165 | 7 | 159 | 9.58e-24 | 100 |
MS.gene011645.t1 | AT4G28530 | 45.946 | 111 | 40 | 3 | 7 | 100 | 10 | 117 | 1.15e-23 | 99.4 |
MS.gene011645.t1 | AT4G01540 | 26.190 | 294 | 184 | 8 | 10 | 298 | 7 | 272 | 1.27e-23 | 100 |
MS.gene011645.t1 | AT4G01540 | 34.810 | 158 | 96 | 3 | 10 | 165 | 7 | 159 | 2.02e-23 | 100 |
MS.gene011645.t1 | AT4G01540 | 26.190 | 294 | 184 | 8 | 10 | 298 | 7 | 272 | 2.91e-23 | 100 |
MS.gene011645.t1 | AT1G56010 | 50.485 | 103 | 41 | 3 | 64 | 161 | 8 | 105 | 4.65e-23 | 96.3 |
MS.gene011645.t1 | AT3G44350 | 37.410 | 139 | 82 | 4 | 7 | 142 | 5 | 141 | 1.25e-22 | 92.8 |
MS.gene011645.t1 | AT2G33480 | 50.000 | 98 | 44 | 3 | 64 | 160 | 10 | 103 | 2.03e-22 | 93.6 |
MS.gene011645.t1 | AT3G04420 | 38.462 | 130 | 75 | 3 | 8 | 135 | 4 | 130 | 8.03e-22 | 93.6 |
MS.gene011645.t1 | AT3G04420 | 38.462 | 130 | 75 | 3 | 8 | 135 | 4 | 130 | 1.27e-21 | 94.0 |
MS.gene011645.t1 | AT1G01010 | 30.348 | 201 | 120 | 8 | 10 | 198 | 6 | 198 | 7.25e-19 | 87.0 |
MS.gene011645.t1 | AT1G02220 | 33.835 | 133 | 74 | 4 | 8 | 135 | 4 | 127 | 3.09e-17 | 82.0 |
MS.gene011645.t1 | AT3G55210 | 34.014 | 147 | 80 | 4 | 4 | 137 | 8 | 150 | 2.37e-16 | 78.2 |
MS.gene011645.t1 | AT3G10490 | 49.383 | 81 | 37 | 2 | 82 | 161 | 2 | 79 | 4.80e-16 | 78.2 |
MS.gene011645.t1 | AT3G10490 | 49.383 | 81 | 37 | 2 | 82 | 161 | 2 | 79 | 4.80e-16 | 78.2 |
MS.gene011645.t1 | AT3G56530 | 32.026 | 153 | 96 | 4 | 7 | 157 | 52 | 198 | 5.70e-16 | 77.8 |
MS.gene011645.t1 | AT5G14000 | 31.429 | 140 | 87 | 3 | 1 | 138 | 9 | 141 | 1.82e-15 | 73.2 |
MS.gene011645.t1 | AT5G50820 | 31.250 | 160 | 96 | 5 | 4 | 159 | 14 | 163 | 2.67e-15 | 73.6 |
MS.gene011645.t1 | AT5G14000 | 27.461 | 193 | 128 | 4 | 1 | 191 | 9 | 191 | 3.21e-15 | 73.6 |
MS.gene011645.t1 | AT2G43000 | 40.659 | 91 | 50 | 2 | 71 | 160 | 2 | 89 | 1.76e-13 | 68.6 |
MS.gene011645.t1 | AT2G18060 | 44.595 | 74 | 36 | 2 | 87 | 160 | 2 | 70 | 1.97e-13 | 69.7 |
MS.gene011645.t1 | AT5G22290 | 46.667 | 75 | 31 | 3 | 88 | 162 | 2 | 67 | 6.48e-13 | 67.8 |
Find 66 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGGACTATAATGGAAAT+TGG | 0.146738 | 8.2:+23700064 | MS.gene011645:CDS |
CTATTTGTTCTTGATCCATT+TGG | 0.249925 | 8.2:-23699056 | None:intergenic |
TCAGATAATGTAAGTCAAAA+TGG | 0.276555 | 8.2:+23700006 | MS.gene011645:CDS |
AAACCAATCCTTCAAACTTC+TGG | 0.290622 | 8.2:+23699709 | MS.gene011645:CDS |
GTTTGAAGGATTGGTTTCTA+TGG | 0.297007 | 8.2:-23699703 | None:intergenic |
TATTTGTTCTTGATCCATTT+GGG | 0.300747 | 8.2:-23699055 | None:intergenic |
GAAGAATCAAGAATCATATC+AGG | 0.310654 | 8.2:-23699738 | None:intergenic |
GGGAATTTCATGGACTATAA+TGG | 0.316926 | 8.2:+23700057 | MS.gene011645:CDS |
TGAGGTCTCACTTCCATTGA+TGG | 0.347267 | 8.2:-23699589 | None:intergenic |
ATTATATGTACCTTAAAATA+TGG | 0.351863 | 8.2:-23699266 | None:intergenic |
CAAGCAAGTCACCTGAATAA+TGG | 0.364530 | 8.2:+23699639 | MS.gene011645:CDS |
ATTTGATTATAAACCTCATA+AGG | 0.374916 | 8.2:-23700093 | None:intergenic |
GGCTTTCCAGTAGCCAGCTT+TGG | 0.387525 | 8.2:-23699084 | None:intergenic |
GATCCAGAAGTTTGAAGGAT+TGG | 0.396961 | 8.2:-23699712 | None:intergenic |
AAGTTCTCAAGGGAATTTCA+TGG | 0.401113 | 8.2:+23700047 | MS.gene011645:CDS |
AACCATTCTAAATCTCGTTT+CGG | 0.406610 | 8.2:-23699005 | None:intergenic |
CTTTAGGCGATAGAACTAAC+TGG | 0.414854 | 8.2:+23699198 | MS.gene011645:CDS |
CATGGACTATAATGGAAATT+GGG | 0.418240 | 8.2:+23700065 | MS.gene011645:CDS |
TATCTTGGAAGGGCTCCTTT+AGG | 0.429258 | 8.2:+23699182 | MS.gene011645:CDS |
AAATTGGGATGTTCCTTATG+AGG | 0.431601 | 8.2:+23700080 | MS.gene011645:CDS |
TGAATCACCAAGGCAATCAT+TGG | 0.432172 | 8.2:+23699924 | MS.gene011645:CDS |
GAGCTACCAAAGCTGGCTAC+TGG | 0.434106 | 8.2:+23699078 | MS.gene011645:CDS |
ACATGGTTAAACTCGGCAAT+TGG | 0.434194 | 8.2:-23699678 | None:intergenic |
TTTGCAGTTGCCTGTGATAG+TGG | 0.456084 | 8.2:-23699147 | None:intergenic |
TTCCCTTGAGAACTTGAGTA+AGG | 0.464374 | 8.2:-23700039 | None:intergenic |
GGGGAGATCCAGAAGTTTGA+AGG | 0.472729 | 8.2:-23699717 | None:intergenic |
TACCGAAACGAGATTTAGAA+TGG | 0.473383 | 8.2:+23699003 | MS.gene011645:CDS |
ACAAATAGAGCTACCAAAGC+TGG | 0.483596 | 8.2:+23699071 | MS.gene011645:CDS |
TATGATTCTTGATTCTTCAA+AGG | 0.498256 | 8.2:+23699743 | MS.gene011645:CDS |
CTAGTTCTTCATCAGTTGGA+TGG | 0.505033 | 8.2:-23698660 | None:intergenic |
CCAACTGATGAAGAACTAGT+TGG | 0.507449 | 8.2:+23698664 | MS.gene011645:CDS |
CAGTTAGTTCTATCGCCTAA+AGG | 0.507948 | 8.2:-23699197 | None:intergenic |
CCAACTAGTTCTTCATCAGT+TGG | 0.511441 | 8.2:-23698664 | None:intergenic |
CGAGATCTAAAGTACCCAAA+TGG | 0.514202 | 8.2:+23699041 | MS.gene011645:CDS |
AAATTTGAGTAGGATAAAGT+AGG | 0.517258 | 8.2:-23699964 | None:intergenic |
ATACTATCTTAAAAGAAAAG+TGG | 0.531146 | 8.2:+23698687 | MS.gene011645:CDS |
TCACCTTACTCAAGTTCTCA+AGG | 0.532937 | 8.2:+23700036 | MS.gene011645:CDS |
TTTGATCCATGGGAGTTGCC+TGG | 0.534126 | 8.2:+23698760 | MS.gene011645:CDS |
TGCCTTGGTGATTCACAACT+AGG | 0.543287 | 8.2:-23699916 | None:intergenic |
GTTGCAACAAGTTCCATCAA+TGG | 0.552945 | 8.2:+23699576 | MS.gene011645:CDS |
ATATGTTCCAATGATTGCCT+TGG | 0.556930 | 8.2:-23699931 | None:intergenic |
GCTGGCTACTGGAAAGCCAC+TGG | 0.557528 | 8.2:+23699089 | MS.gene011645:CDS |
TTCAGCATTAAAATTTGAGT+AGG | 0.564818 | 8.2:-23699974 | None:intergenic |
AAGAATCAAGAATCATATCA+GGG | 0.565558 | 8.2:-23699737 | None:intergenic |
GATTGGTTTCTATGGAAACA+TGG | 0.569920 | 8.2:-23699695 | None:intergenic |
CCTTAAAATATGGAGAGTCT+TGG | 0.569933 | 8.2:-23699256 | None:intergenic |
AAAAGAATGAGAAGAGCAAG+AGG | 0.571312 | 8.2:+23699553 | MS.gene011645:CDS |
TGTAGTTCATCCACTATCAC+AGG | 0.581968 | 8.2:+23699137 | MS.gene011645:CDS |
GTTGGATGGAAACGAAAACC+TGG | 0.593509 | 8.2:-23698646 | None:intergenic |
ACTGGATCATGCAAGAGTAT+CGG | 0.596245 | 8.2:+23699216 | MS.gene011645:CDS |
TATGGAAACATGGTTAAACT+CGG | 0.597037 | 8.2:-23699685 | None:intergenic |
CACCTTACTCAAGTTCTCAA+GGG | 0.598211 | 8.2:+23700037 | MS.gene011645:CDS |
AGATTACCAGGCAACTCCCA+TGG | 0.598328 | 8.2:-23698766 | None:intergenic |
GAATAATGGATCACAAAATG+TGG | 0.600990 | 8.2:+23699653 | MS.gene011645:CDS |
GGAGCATTATTACTGCCACC+AGG | 0.607504 | 8.2:+23698628 | MS.gene011645:CDS |
GTCACTTGAGAATCTCATTG+AGG | 0.608676 | 8.2:-23699607 | None:intergenic |
TATCTTAAAAGAAAAGTGGA+AGG | 0.610976 | 8.2:+23698691 | MS.gene011645:CDS |
AGAGTCTTGGCTAAGATCAT+CGG | 0.612585 | 8.2:-23699243 | None:intergenic |
ACATTGCAATATAACATGGA+AGG | 0.636691 | 8.2:+23698607 | None:intergenic |
AAGAGAGAAAGATTGTGTGC+CGG | 0.639026 | 8.2:+23699114 | MS.gene011645:CDS |
CTCCTAGTTGTGAATCACCA+AGG | 0.645942 | 8.2:+23699914 | MS.gene011645:CDS |
CTTGGTGATTCACAACTAGG+AGG | 0.658943 | 8.2:-23699913 | None:intergenic |
AAAGAATGAGAAGAGCAAGA+GGG | 0.661577 | 8.2:+23699554 | MS.gene011645:CDS |
TGATAGTGGATGAACTACAC+CGG | 0.698203 | 8.2:-23699133 | None:intergenic |
AGAATCAAGAATCATATCAG+GGG | 0.707288 | 8.2:-23699736 | None:intergenic |
GGATGGAAACGAAAACCTGG+TGG | 0.763193 | 8.2:-23698643 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAGTATATTTCAAATGTA+AGG | + | chr8.2:23698842-23698861 | MS.gene011645:intron | 15.0% |
!! | AATTATAATATGAACAAATG+AGG | + | chr8.2:23699787-23699806 | MS.gene011645:intron | 15.0% |
!! | ATTATATGTACCTTAAAATA+TGG | - | chr8.2:23699269-23699288 | None:intergenic | 15.0% |
!! | AATTTGTAAAAATCAATCAC+TGG | - | chr8.2:23698742-23698761 | None:intergenic | 20.0% |
!! | ATACTATCTTAAAAGAAAAG+TGG | + | chr8.2:23698687-23698706 | MS.gene011645:CDS | 20.0% |
!! | ATTTGATTATAAACCTCATA+AGG | - | chr8.2:23700096-23700115 | None:intergenic | 20.0% |
!!! | ATTTTTACAAATTTGATCCA+TGG | + | chr8.2:23698749-23698768 | MS.gene011645:CDS | 20.0% |
!!! | TTTTTACAAATTTGATCCAT+GGG | + | chr8.2:23698750-23698769 | MS.gene011645:CDS | 20.0% |
! | AAATTTGAGTAGGATAAAGT+AGG | - | chr8.2:23699967-23699986 | None:intergenic | 25.0% |
! | AAGAATCAAGAATCATATCA+GGG | - | chr8.2:23699740-23699759 | None:intergenic | 25.0% |
! | GAGATTGAATGACTATAATT+TGG | + | chr8.2:23699816-23699835 | MS.gene011645:intron | 25.0% |
! | TAAAAGATTCTATTTCACAC+AGG | - | chr8.2:23698902-23698921 | None:intergenic | 25.0% |
! | TATCTTAAAAGAAAAGTGGA+AGG | + | chr8.2:23698691-23698710 | MS.gene011645:CDS | 25.0% |
! | TATGATTCTTGATTCTTCAA+AGG | + | chr8.2:23699743-23699762 | MS.gene011645:CDS | 25.0% |
! | TATTTGTTCTTGATCCATTT+GGG | - | chr8.2:23699058-23699077 | None:intergenic | 25.0% |
! | TCAGATAATGTAAGTCAAAA+TGG | + | chr8.2:23700006-23700025 | MS.gene011645:CDS | 25.0% |
! | TTCAAATGTAAGGTTTGATA+TGG | + | chr8.2:23698852-23698871 | MS.gene011645:intron | 25.0% |
! | TTCAGCATTAAAATTTGAGT+AGG | - | chr8.2:23699977-23699996 | None:intergenic | 25.0% |
! | TTTCTGCATTGTTTATGATA+AGG | + | chr8.2:23698930-23698949 | MS.gene011645:intron | 25.0% |
!!! | AAAACACTTGTTTTCTATCT+TGG | + | chr8.2:23699167-23699186 | MS.gene011645:CDS | 25.0% |
!!! | TCTCATTCTTTTTGATAACT+CGG | - | chr8.2:23699545-23699564 | None:intergenic | 25.0% |
AACCATTCTAAATCTCGTTT+CGG | - | chr8.2:23699008-23699027 | None:intergenic | 30.0% | |
ACAAAGCTAACACATTACTA+AGG | - | chr8.2:23699423-23699442 | None:intergenic | 30.0% | |
AGAATCAAGAATCATATCAG+GGG | - | chr8.2:23699739-23699758 | None:intergenic | 30.0% | |
ATGTGAAATTGAAGATTACC+AGG | - | chr8.2:23698781-23698800 | None:intergenic | 30.0% | |
CTATTTGTTCTTGATCCATT+TGG | - | chr8.2:23699059-23699078 | None:intergenic | 30.0% | |
GAAGAATCAAGAATCATATC+AGG | - | chr8.2:23699741-23699760 | None:intergenic | 30.0% | |
TATGGAAACATGGTTAAACT+CGG | - | chr8.2:23699688-23699707 | None:intergenic | 30.0% | |
! | CATGGACTATAATGGAAATT+GGG | + | chr8.2:23700065-23700084 | MS.gene011645:CDS | 30.0% |
! | CATTTTGTGATCCATTATTC+AGG | - | chr8.2:23699653-23699672 | None:intergenic | 30.0% |
! | TCATGGACTATAATGGAAAT+TGG | + | chr8.2:23700064-23700083 | MS.gene011645:CDS | 30.0% |
!! | AAGGAGTTTGTTTTCTATGT+AGG | - | chr8.2:23699404-23699423 | None:intergenic | 30.0% |
!! | ACTTGTTTTCTATCTTGGAA+GGG | + | chr8.2:23699172-23699191 | MS.gene011645:CDS | 30.0% |
!! | GAATAATGGATCACAAAATG+TGG | + | chr8.2:23699653-23699672 | MS.gene011645:CDS | 30.0% |
AAAAGAATGAGAAGAGCAAG+AGG | + | chr8.2:23699553-23699572 | MS.gene011645:CDS | 35.0% | |
AAACCAATCCTTCAAACTTC+TGG | + | chr8.2:23699709-23699728 | MS.gene011645:CDS | 35.0% | |
AAAGAATGAGAAGAGCAAGA+GGG | + | chr8.2:23699554-23699573 | MS.gene011645:CDS | 35.0% | |
AAATTGGGATGTTCCTTATG+AGG | + | chr8.2:23700080-23700099 | MS.gene011645:CDS | 35.0% | |
AAGTTCTCAAGGGAATTTCA+TGG | + | chr8.2:23700047-23700066 | MS.gene011645:CDS | 35.0% | |
ATATGTTCCAATGATTGCCT+TGG | - | chr8.2:23699934-23699953 | None:intergenic | 35.0% | |
CCTTAAAATATGGAGAGTCT+TGG | - | chr8.2:23699259-23699278 | None:intergenic | 35.0% | |
CTTTAGTATACTCCTACAGT+TGG | - | chr8.2:23699867-23699886 | None:intergenic | 35.0% | |
GAACGTTGGAAGACTAAATT+AGG | + | chr8.2:23699462-23699481 | MS.gene011645:intron | 35.0% | |
TACCGAAACGAGATTTAGAA+TGG | + | chr8.2:23699003-23699022 | MS.gene011645:CDS | 35.0% | |
TCAATTGCAAGACTATGATC+TGG | + | chr8.2:23699347-23699366 | MS.gene011645:intron | 35.0% | |
! | AATCTTTCTCTCTTTTCCAG+TGG | - | chr8.2:23699108-23699127 | None:intergenic | 35.0% |
! | AGTTTTACTACACCAACTGT+AGG | + | chr8.2:23699852-23699871 | MS.gene011645:intron | 35.0% |
! | CCAAGACTCTCCATATTTTA+AGG | + | chr8.2:23699256-23699275 | MS.gene011645:CDS | 35.0% |
! | GGGAATTTCATGGACTATAA+TGG | + | chr8.2:23700057-23700076 | MS.gene011645:CDS | 35.0% |
! | GTAGCGTCTTTGTATTTTCA+CGG | + | chr8.2:23699303-23699322 | MS.gene011645:intron | 35.0% |
!! | CACTTGTTTTCTATCTTGGA+AGG | + | chr8.2:23699171-23699190 | MS.gene011645:CDS | 35.0% |
!! | CTTTAGCTTTAACAGAACGT+TGG | + | chr8.2:23699448-23699467 | MS.gene011645:intron | 35.0% |
!! | GATTGGTTTCTATGGAAACA+TGG | - | chr8.2:23699698-23699717 | None:intergenic | 35.0% |
!! | GTTTGAAGGATTGGTTTCTA+TGG | - | chr8.2:23699706-23699725 | None:intergenic | 35.0% |
AAGAGAGAAAGATTGTGTGC+CGG | + | chr8.2:23699114-23699133 | MS.gene011645:CDS | 40.0% | |
ACAAATAGAGCTACCAAAGC+TGG | + | chr8.2:23699071-23699090 | MS.gene011645:CDS | 40.0% | |
ACATGGTTAAACTCGGCAAT+TGG | - | chr8.2:23699681-23699700 | None:intergenic | 40.0% | |
AGAGTCTTGGCTAAGATCAT+CGG | - | chr8.2:23699246-23699265 | None:intergenic | 40.0% | |
CAAGCAAGTCACCTGAATAA+TGG | + | chr8.2:23699639-23699658 | MS.gene011645:CDS | 40.0% | |
CACCTTACTCAAGTTCTCAA+GGG | + | chr8.2:23700037-23700056 | MS.gene011645:CDS | 40.0% | |
CATTTCACACCTCATGCATT+AGG | - | chr8.2:23698968-23698987 | None:intergenic | 40.0% | |
CCAACTGATGAAGAACTAGT+TGG | + | chr8.2:23698664-23698683 | MS.gene011645:CDS | 40.0% | |
CTTTAGGCGATAGAACTAAC+TGG | + | chr8.2:23699198-23699217 | MS.gene011645:CDS | 40.0% | |
GATCCAGAAGTTTGAAGGAT+TGG | - | chr8.2:23699715-23699734 | None:intergenic | 40.0% | |
GCATATATGTGGTTGCTGTA+GGG | + | chr8.2:23699504-23699523 | MS.gene011645:intron | 40.0% | |
GTCACTTGAGAATCTCATTG+AGG | - | chr8.2:23699610-23699629 | None:intergenic | 40.0% | |
GTTGCAACAAGTTCCATCAA+TGG | + | chr8.2:23699576-23699595 | MS.gene011645:CDS | 40.0% | |
TCACCTTACTCAAGTTCTCA+AGG | + | chr8.2:23700036-23700055 | MS.gene011645:CDS | 40.0% | |
TGAATCACCAAGGCAATCAT+TGG | + | chr8.2:23699924-23699943 | MS.gene011645:CDS | 40.0% | |
TGCATATATGTGGTTGCTGT+AGG | + | chr8.2:23699503-23699522 | MS.gene011645:intron | 40.0% | |
TGTAGTTCATCCACTATCAC+AGG | + | chr8.2:23699137-23699156 | MS.gene011645:CDS | 40.0% | |
TTCCCTTGAGAACTTGAGTA+AGG | - | chr8.2:23700042-23700061 | None:intergenic | 40.0% | |
TTTGAGAAGCCTAATGCATG+AGG | + | chr8.2:23698956-23698975 | MS.gene011645:intron | 40.0% | |
! | ACTGGATCATGCAAGAGTAT+CGG | + | chr8.2:23699216-23699235 | MS.gene011645:CDS | 40.0% |
! | CCAACTAGTTCTTCATCAGT+TGG | - | chr8.2:23698667-23698686 | None:intergenic | 40.0% |
! | CGAGATCTAAAGTACCCAAA+TGG | + | chr8.2:23699041-23699060 | MS.gene011645:CDS | 40.0% |
! | CTAGTTCTTCATCAGTTGGA+TGG | - | chr8.2:23698663-23698682 | None:intergenic | 40.0% |
! | CTTTTACTTTAACGTGCGGT+GGG | + | chr8.2:23699372-23699391 | MS.gene011645:intron | 40.0% |
! | GGAGCTTTTACTTTAACGTG+CGG | + | chr8.2:23699368-23699387 | MS.gene011645:intron | 40.0% |
!! | CAGTTAGTTCTATCGCCTAA+AGG | - | chr8.2:23699200-23699219 | None:intergenic | 40.0% |
!! | TGATAGTGGATGAACTACAC+CGG | - | chr8.2:23699136-23699155 | None:intergenic | 40.0% |
CTCCTAGTTGTGAATCACCA+AGG | + | chr8.2:23699914-23699933 | MS.gene011645:CDS | 45.0% | |
GTTGGATGGAAACGAAAACC+TGG | - | chr8.2:23698649-23698668 | None:intergenic | 45.0% | |
TATATGTGGTTGCTGTAGGG+TGG | + | chr8.2:23699507-23699526 | MS.gene011645:intron | 45.0% | |
TATCTTGGAAGGGCTCCTTT+AGG | + | chr8.2:23699182-23699201 | MS.gene011645:CDS | 45.0% | |
TGAGGTCTCACTTCCATTGA+TGG | - | chr8.2:23699592-23699611 | None:intergenic | 45.0% | |
TTTGCAGTTGCCTGTGATAG+TGG | - | chr8.2:23699150-23699169 | None:intergenic | 45.0% | |
! | CTTGGTGATTCACAACTAGG+AGG | - | chr8.2:23699916-23699935 | None:intergenic | 45.0% |
! | GCTTTTACTTTAACGTGCGG+TGG | + | chr8.2:23699371-23699390 | MS.gene011645:intron | 45.0% |
! | TGCCTTGGTGATTCACAACT+AGG | - | chr8.2:23699919-23699938 | None:intergenic | 45.0% |
AGATTACCAGGCAACTCCCA+TGG | - | chr8.2:23698769-23698788 | None:intergenic | 50.0% | |
GGATGGAAACGAAAACCTGG+TGG | - | chr8.2:23698646-23698665 | None:intergenic | 50.0% | |
GGGGAGATCCAGAAGTTTGA+AGG | - | chr8.2:23699720-23699739 | None:intergenic | 50.0% | |
TTTGATCCATGGGAGTTGCC+TGG | + | chr8.2:23698760-23698779 | MS.gene011645:CDS | 50.0% | |
! | GGAGCATTATTACTGCCACC+AGG | + | chr8.2:23698628-23698647 | MS.gene011645:CDS | 50.0% |
GAGCTACCAAAGCTGGCTAC+TGG | + | chr8.2:23699078-23699097 | MS.gene011645:CDS | 55.0% | |
GGCTTTCCAGTAGCCAGCTT+TGG | - | chr8.2:23699087-23699106 | None:intergenic | 55.0% | |
TGCACGCGCGTGCATATATG+TGG | + | chr8.2:23699493-23699512 | MS.gene011645:intron | 55.0% | |
GCTGGCTACTGGAAAGCCAC+TGG | + | chr8.2:23699089-23699108 | MS.gene011645:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 23698622 | 23700146 | 23698622 | ID=MS.gene011645 |
chr8.2 | mRNA | 23698622 | 23700146 | 23698622 | ID=MS.gene011645.t1;Parent=MS.gene011645 |
chr8.2 | exon | 23698622 | 23698781 | 23698622 | ID=MS.gene011645.t1.exon1;Parent=MS.gene011645.t1 |
chr8.2 | CDS | 23698622 | 23698781 | 23698622 | ID=cds.MS.gene011645.t1;Parent=MS.gene011645.t1 |
chr8.2 | exon | 23698991 | 23699277 | 23698991 | ID=MS.gene011645.t1.exon2;Parent=MS.gene011645.t1 |
chr8.2 | CDS | 23698991 | 23699277 | 23698991 | ID=cds.MS.gene011645.t1;Parent=MS.gene011645.t1 |
chr8.2 | exon | 23699525 | 23699764 | 23699525 | ID=MS.gene011645.t1.exon3;Parent=MS.gene011645.t1 |
chr8.2 | CDS | 23699525 | 23699764 | 23699525 | ID=cds.MS.gene011645.t1;Parent=MS.gene011645.t1 |
chr8.2 | exon | 23699874 | 23700146 | 23699874 | ID=MS.gene011645.t1.exon4;Parent=MS.gene011645.t1 |
chr8.2 | CDS | 23699874 | 23700146 | 23699874 | ID=cds.MS.gene011645.t1;Parent=MS.gene011645.t1 |
Gene Sequence |
Protein sequence |