AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011661

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011661.t1 MTR_4g098035 84.637 358 31 4 1 350 1 342 0.0 600
MS.gene011661.t1 MTR_0246s0050 84.570 337 28 4 22 350 1 321 0.0 565
MS.gene011661.t1 MTR_0246s0020 50.758 396 132 15 1 350 1 379 1.40e-107 320
MS.gene011661.t1 MTR_0246s0020 47.558 389 139 16 1 343 1 370 5.58e-92 280
MS.gene011661.t1 MTR_6g047570 49.041 365 142 13 1 350 1 336 4.01e-90 273
MS.gene011661.t1 MTR_4g066380 46.629 356 152 11 1 349 1 325 1.28e-85 262
MS.gene011661.t1 MTR_0011s0210 45.745 376 162 12 1 350 1 360 8.37e-84 258
MS.gene011661.t1 MTR_0011s0260 46.133 375 160 12 1 349 1 359 1.26e-83 258
MS.gene011661.t1 MTR_4g067010 46.893 354 147 12 1 348 1 319 1.68e-83 256
MS.gene011661.t1 MTR_4g066460 47.934 363 142 15 1 350 1 329 8.26e-80 247
MS.gene011661.t1 MTR_0250s0040 48.289 263 100 10 101 350 26 265 9.38e-66 209
MS.gene011661.t1 MTR_5g014520 41.399 343 162 10 17 349 20 333 1.47e-60 197
MS.gene011661.t1 MTR_6g047550 48.263 259 109 10 1 250 1 243 2.08e-54 180
MS.gene011661.t1 MTR_5g014560 49.754 203 88 5 160 349 106 307 4.84e-54 180
MS.gene011661.t1 MTR_2g010450 34.169 319 166 6 62 348 47 353 2.83e-45 158
MS.gene011661.t1 MTR_4g009540 38.057 247 126 5 115 346 97 331 1.22e-41 148
MS.gene011661.t1 MTR_5g014600 42.553 188 88 2 178 345 147 334 2.28e-41 147
MS.gene011661.t1 MTR_4g097940 40.437 183 100 3 165 340 140 320 3.44e-38 139
MS.gene011661.t1 MTR_4g097920 39.227 181 105 2 165 340 125 305 1.56e-37 137
MS.gene011661.t1 MTR_4g092700 39.583 192 109 1 164 348 142 333 1.57e-37 137
MS.gene011661.t1 MTR_4g097920 39.227 181 105 2 165 340 140 320 2.05e-37 137
MS.gene011661.t1 MTR_4g097950 35.968 253 142 3 111 347 3 251 2.89e-36 132
MS.gene011661.t1 MTR_4g009110 36.948 249 130 6 115 346 112 350 1.79e-35 132
MS.gene011661.t1 MTR_4g009540 37.611 226 114 5 115 325 97 310 1.68e-34 129
MS.gene011661.t1 MTR_8g009020 36.508 189 106 2 167 341 130 318 1.79e-32 124
MS.gene011661.t1 MTR_5g014640 34.225 187 118 2 163 345 138 323 4.40e-32 122
MS.gene011661.t1 MTR_2g104490 34.874 238 130 8 117 340 76 302 1.05e-31 121
MS.gene011661.t1 MTR_7g080780 29.771 262 165 5 80 341 69 311 1.52e-31 121
MS.gene011661.t1 MTR_7g080780 29.771 262 165 5 80 341 82 324 1.65e-31 121
MS.gene011661.t1 MTR_2g104560 31.897 232 131 6 123 347 15 226 1.11e-30 116
MS.gene011661.t1 MTR_2g104550 35.204 196 109 3 167 349 125 315 1.88e-30 118
MS.gene011661.t1 MTR_2g104650 31.858 226 132 5 134 344 49 267 1.40e-27 109
MS.gene011661.t1 MTR_2g104500 36.364 176 96 4 180 346 104 272 7.16e-26 105
MS.gene011661.t1 MTR_2g104490 33.632 223 123 8 117 325 76 287 2.56e-25 103
MS.gene011661.t1 MTR_8g009010 31.780 236 120 5 111 341 68 267 1.27e-24 102
MS.gene011661.t1 MTR_4g009510 38.411 151 88 3 194 343 56 202 1.73e-24 99.4
MS.gene011661.t1 MTR_2g104530 32.178 202 122 4 153 341 70 269 1.95e-24 101
MS.gene011661.t1 MTR_4g009420 39.855 138 72 2 206 343 68 194 1.81e-23 96.7
MS.gene011661.t1 MTR_7g451650 38.849 139 80 3 206 343 60 194 9.49e-23 94.7
MS.gene011661.t1 MTR_8g069740 33.333 189 96 5 153 324 90 265 1.75e-22 95.5
MS.gene011661.t1 MTR_7g050350 37.778 135 79 3 210 343 2 132 2.73e-21 89.0
MS.gene011661.t1 MTR_7g451650 37.778 135 79 3 210 343 2 132 2.73e-21 89.0
MS.gene011661.t1 MTR_2g104590 33.702 181 99 7 169 344 58 222 2.55e-20 89.0
MS.gene011661.t1 MTR_5g014550 41.803 122 62 2 210 323 54 174 7.18e-19 84.0
MS.gene011661.t1 MTR_4g009420 38.333 120 63 2 206 325 68 176 4.80e-16 76.3
MS.gene011661.t1 MTR_7g451650 37.190 121 71 3 206 325 60 176 1.27e-15 74.7
MS.gene011661.t1 MTR_7g117670 26.496 234 155 7 103 327 324 549 9.66e-15 75.5
MS.gene011661.t1 MTR_1g072320 28.873 142 86 2 180 306 470 611 6.19e-13 70.1
MS.gene011661.t1 MTR_8g067280 30.070 143 82 2 180 304 462 604 4.52e-12 67.4
MS.gene011661.t1 MTR_8g027495 29.448 163 103 5 180 337 458 613 7.46e-12 67.0
MS.gene011661.t1 MTR_8g024790 31.061 132 76 5 180 298 291 420 2.08e-11 65.1
MS.gene011661.t1 MTR_3g498695 25.532 188 122 3 166 336 284 470 4.86e-11 64.3
MS.gene011661.t1 MTR_3g498695 24.468 188 125 2 166 336 284 471 5.37e-11 63.9
MS.gene011661.t1 MTR_8g064700 25.434 173 116 6 162 322 227 398 5.86e-11 63.5
MS.gene011661.t1 MTR_5g030430 28.395 162 79 5 180 310 493 648 8.94e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011661.t1 AT2G22760 38.421 190 104 4 168 345 107 295 9.07e-37 134
MS.gene011661.t1 AT2G22770 35.385 195 104 2 171 343 123 317 6.51e-34 127
MS.gene011661.t1 AT4G37850 38.974 195 104 5 166 348 137 328 1.55e-33 127
MS.gene011661.t1 AT4G37850 38.974 195 104 5 166 348 137 328 1.55e-33 127
MS.gene011661.t1 AT2G22760 38.462 169 92 3 168 325 107 274 1.26e-31 120
MS.gene011661.t1 AT2G22750 37.949 195 107 4 166 347 139 332 4.39e-29 115
MS.gene011661.t1 AT2G22750 37.949 195 107 4 166 347 111 304 4.58e-29 114
MS.gene011661.t1 AT2G22750 37.949 195 107 4 166 347 135 328 5.60e-29 114
MS.gene011661.t1 AT2G22750 37.949 195 106 5 166 347 111 303 6.89e-28 111
MS.gene011661.t1 AT2G22750 37.949 195 106 5 166 347 139 331 7.49e-28 111
MS.gene011661.t1 AT5G46760 29.834 181 93 7 180 329 415 592 2.01e-14 74.7
MS.gene011661.t1 AT4G17880 30.921 152 77 4 180 310 416 560 5.01e-13 70.5
MS.gene011661.t1 AT2G46510 36.559 93 53 2 180 268 395 485 5.44e-13 70.5
MS.gene011661.t1 AT4G09820 32.456 114 64 2 181 294 364 464 2.32e-12 68.2
MS.gene011661.t1 AT1G32640 29.323 133 86 2 180 304 452 584 4.28e-12 67.8
MS.gene011661.t1 AT1G01260 26.027 146 92 3 180 324 433 563 1.29e-11 66.2
MS.gene011661.t1 AT1G01260 26.027 146 92 3 180 324 433 563 1.29e-11 66.2
MS.gene011661.t1 AT1G01260 26.027 146 92 3 180 324 433 563 1.29e-11 66.2
MS.gene011661.t1 AT1G12860 29.197 137 84 3 181 304 268 404 1.65e-11 65.5
MS.gene011661.t1 AT1G12860 28.966 145 90 3 181 312 268 412 2.35e-11 65.1
MS.gene011661.t1 AT3G61950 28.369 141 92 3 180 311 128 268 3.20e-11 63.9
MS.gene011661.t1 AT1G63650 29.054 148 80 2 180 302 405 552 3.46e-11 64.7
MS.gene011661.t1 AT1G63650 29.054 148 80 2 180 302 405 552 3.46e-11 64.7
MS.gene011661.t1 AT1G63650 29.054 148 80 2 180 302 405 552 3.46e-11 64.7
MS.gene011661.t1 AT3G61950 28.369 141 92 3 180 311 179 319 4.08e-11 63.9
MS.gene011661.t1 AT3G61950 28.369 141 92 3 180 311 128 268 6.16e-11 63.2
MS.gene011661.t1 AT3G61950 28.369 141 92 3 180 311 179 319 7.05e-11 63.2

Find 54 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTGTCATTGCCCAATT+TGG 0.113408 8.2:+23855119 MS.gene011661:CDS
CCATATAACTCTGTTGGGTT+TGG 0.235162 8.2:-23855078 None:intergenic
AAAATGTGTGTTTCCCAAAT+TGG 0.240242 8.2:-23855133 None:intergenic
CATATAACTCTGTTGGGTTT+GGG 0.267769 8.2:-23855077 None:intergenic
CACTTTCAGTTTCACAATAA+TGG 0.277610 8.2:-23856266 None:intergenic
CCAAACCCAACAGAGTTATA+TGG 0.288363 8.2:+23855078 MS.gene011661:CDS
CAGCAGCTTGTTATCTGATT+TGG 0.291017 8.2:+23854333 MS.gene011661:CDS
AGTTACTTCTTACCTTCTTT+AGG 0.329290 8.2:-23855311 None:intergenic
GGCTAGTGCCATTGCCTTTG+AGG 0.358165 8.2:+23854849 MS.gene011661:CDS
ATGCTGCCATGCGTAGATTC+TGG 0.364951 8.2:-23859645 None:intergenic
ATCACAATCTAAGAGGTCTT+TGG 0.381777 8.2:+23855200 MS.gene011661:CDS
TCATGTAAAAGATCACATTA+TGG 0.388118 8.2:+23855224 MS.gene011661:CDS
CTTCTTACCTTCTTTAGGTC+AGG 0.391987 8.2:-23855306 None:intergenic
TTGGTGATGCTACTGCTATC+AGG 0.398588 8.2:+23856289 MS.gene011661:CDS
TGTTTCCCATATAACTCTGT+TGG 0.402985 8.2:-23855084 None:intergenic
TGGAAATGCATTGTTGTTGT+AGG 0.403279 8.2:-23854885 None:intergenic
AAATGTGTGTTTCCCAAATT+GGG 0.425335 8.2:-23855132 None:intergenic
CAGAGAGCTTAAAGAGCGTT+TGG 0.427393 8.2:+23856176 MS.gene011661:CDS
TCAGTGTCATTGCCCAATTT+GGG 0.429779 8.2:+23855120 MS.gene011661:CDS
GTTTCCCATATAACTCTGTT+GGG 0.433812 8.2:-23855083 None:intergenic
AGGGTAGAAGCAAAAGTGTC+AGG 0.446583 8.2:+23856309 MS.gene011661:CDS
TCAGTTTCACAATAATGGTC+TGG 0.457881 8.2:-23856261 None:intergenic
CAAACCCAACAGAGTTATAT+GGG 0.463398 8.2:+23855079 MS.gene011661:CDS
TAGTTGATAACTTTGAATCT+CGG 0.486449 8.2:-23856394 None:intergenic
ATCTTCACAAAATCAAAACT+TGG 0.496783 8.2:+23855167 MS.gene011661:CDS
GGAAATGCATTGTTGTTGTA+GGG 0.510877 8.2:-23854884 None:intergenic
ACTCTAAGTGAAACATTCAA+TGG 0.521045 8.2:+23854910 MS.gene011661:CDS
AATCAACTTGCAGGAAAAGG+TGG 0.532498 8.2:+23854747 MS.gene011661:intron
CTAAAACATCACAATCTAAG+AGG 0.533656 8.2:+23855193 MS.gene011661:CDS
ATTGAATGTTTCACTTAGAG+TGG 0.534149 8.2:-23854908 None:intergenic
CTGTCTGCTGATATGTTCGT+TGG 0.540769 8.2:-23854313 None:intergenic
ACTCATTCCTGACCTAAAGA+AGG 0.565332 8.2:+23855299 MS.gene011661:CDS
TGGTGATGCTACTGCTATCA+GGG 0.568737 8.2:+23856290 MS.gene011661:CDS
GAATGTTTCACTTAGAGTGG+TGG 0.569449 8.2:-23854905 None:intergenic
AGAAAACGAAGAGAGAAACT+TGG 0.582674 8.2:+23855252 MS.gene011661:CDS
CAGCAATGATTGTAATGTCG+TGG 0.584079 8.2:-23856458 None:intergenic
ATCAACTTGCAGGAAAAGGT+GGG 0.593520 8.2:+23854748 MS.gene011661:intron
GGGTAGAAGCAAAAGTGTCA+GGG 0.600504 8.2:+23856310 MS.gene011661:CDS
ATTGGGCAATGACACTGAAG+TGG 0.611878 8.2:-23855115 None:intergenic
AGAGTTTCTCTCACGTGACA+TGG 0.613188 8.2:+23854828 MS.gene011661:CDS
GAGTGTTGCAAGAGCAACGA+AGG 0.617935 8.2:-23855280 None:intergenic
TATTGTGAAACTGAAAGTGT+TGG 0.622676 8.2:+23856270 MS.gene011661:CDS
AAAGACGACTGAAAGGTGGA+TGG 0.629176 8.2:-23855048 None:intergenic
GTTGTCAAAAGACGACTGAA+AGG 0.637121 8.2:-23855055 None:intergenic
ATATGTTAATTAGAAGGACA+AGG 0.637697 8.2:+23856122 MS.gene011661:intron
CACAAAGGAAGATCAATCGA+TGG 0.644880 8.2:+23856224 MS.gene011661:CDS
GAACTTGCTTGATGCTGACG+TGG 0.647274 8.2:+23854801 MS.gene011661:CDS
GGGTGAATACATATTTGATG+AGG 0.650159 8.2:+23854768 MS.gene011661:CDS
CGACATTACAATCATTGCTG+AGG 0.658041 8.2:+23856461 MS.gene011661:CDS
GTCAAAAGACGACTGAAAGG+TGG 0.660762 8.2:-23855052 None:intergenic
ACTCGTCCAGAATCTACGCA+TGG 0.674291 8.2:+23859639 MS.gene011661:CDS
AGAAGAAGGAAAGAACACAA+AGG 0.683823 8.2:+23856209 MS.gene011661:CDS
AAAGGAAGATCAATCGATGG+TGG 0.686344 8.2:+23856227 MS.gene011661:CDS
AACGCTCTTTAAGCTCTCTG+AGG 0.694337 8.2:-23856173 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAATAATAATTAA+AGG + chr8.2:23857140-23857159 MS.gene011661:intron 0.0%
!!! TTTAATTATTATTTATTTTT+TGG - chr8.2:23857141-23857160 None:intergenic 0.0%
!! ATAATTTAAGAAAATTAAAG+TGG - chr8.2:23855569-23855588 None:intergenic 10.0%
!! ATATTTCACAAAATTTATTA+GGG - chr8.2:23858485-23858504 None:intergenic 10.0%
!! TTTATTGGTAAAAAAAATAA+AGG + chr8.2:23856945-23856964 MS.gene011661:intron 10.0%
!!! TCATTTTGAAAATTTTTTTT+TGG + chr8.2:23855783-23855802 MS.gene011661:intron 10.0%
!!! TTCTTATTTGATAAAAAATT+AGG + chr8.2:23859018-23859037 MS.gene011661:intron 10.0%
!! AAACAAATTTGAATTTACTA+GGG + chr8.2:23857653-23857672 MS.gene011661:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr8.2:23857302-23857321 None:intergenic 15.0%
!! ATATTTAACCCTTAAATATT+GGG + chr8.2:23857776-23857795 MS.gene011661:intron 15.0%
!! CATATTTCACAAAATTTATT+AGG - chr8.2:23858486-23858505 None:intergenic 15.0%
!! CATTTAATTAATGATATATG+TGG + chr8.2:23859213-23859232 MS.gene011661:intron 15.0%
!! GTCTATAAATTTCTATATAT+GGG - chr8.2:23859332-23859351 None:intergenic 15.0%
!! TAAACAAATTTGAATTTACT+AGG + chr8.2:23857652-23857671 MS.gene011661:intron 15.0%
!! TACTTATAATTAAAAACAGA+GGG + chr8.2:23859290-23859309 MS.gene011661:intron 15.0%
!! TCTATAAATTTCTATATATG+GGG - chr8.2:23859331-23859350 None:intergenic 15.0%
!! TGCATTACATATAAAAAAAA+AGG - chr8.2:23858858-23858877 None:intergenic 15.0%
!! TGTAAAATATGTTAATTAGA+AGG + chr8.2:23856116-23856135 MS.gene011661:intron 15.0%
!! TGTATATTAGTAGAAAAATA+TGG + chr8.2:23856852-23856871 MS.gene011661:intron 15.0%
!! TTACTTATAATTAAAAACAG+AGG + chr8.2:23859289-23859308 MS.gene011661:intron 15.0%
!! TTATTAGATGAAATTCATAT+GGG - chr8.2:23859083-23859102 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr8.2:23857392-23857411 None:intergenic 15.0%
!! TTTATTAGATGAAATTCATA+TGG - chr8.2:23859084-23859103 None:intergenic 15.0%
!!! AATAATCGTATTTTAACATT+TGG + chr8.2:23856426-23856445 MS.gene011661:CDS 15.0%
!!! AGTCATTACTTAATTTTAAT+AGG - chr8.2:23857720-23857739 None:intergenic 15.0%
!!! ATAAGTAAATTTTGACTTTT+AGG - chr8.2:23859277-23859296 None:intergenic 15.0%
!!! ATTTTTGAACGATTTTTTTT+AGG + chr8.2:23857403-23857422 MS.gene011661:intron 15.0%
!!! GATATTTTATTAGTAAAAGA+TGG - chr8.2:23856559-23856578 None:intergenic 15.0%
!!! GTATTTTTCTTATAAAGTAA+GGG - chr8.2:23855690-23855709 None:intergenic 15.0%
!!! TAGAATCTATTTCTAAAATA+TGG - chr8.2:23859045-23859064 None:intergenic 15.0%
!!! TATCATGAACTTAAATTTTA+GGG + chr8.2:23858239-23858258 MS.gene011661:intron 15.0%
!!! TGTATTTTTCTTATAAAGTA+AGG - chr8.2:23855691-23855710 None:intergenic 15.0%
!! AAATATAAATGAGAAAACAG+TGG - chr8.2:23858968-23858987 None:intergenic 20.0%
!! AAGTTCATGATACAAAAAAT+AGG - chr8.2:23858231-23858250 None:intergenic 20.0%
!! AATGCATGTAATTAATATCT+TGG - chr8.2:23857056-23857075 None:intergenic 20.0%
!! AATTAGCATTTATCTTATAC+CGG - chr8.2:23856046-23856065 None:intergenic 20.0%
!! ACAAAATAAACTTTATGACA+TGG - chr8.2:23856581-23856600 None:intergenic 20.0%
!! ACAAGTTAATGATTCAAATA+TGG + chr8.2:23858328-23858347 MS.gene011661:intron 20.0%
!! AGTTAAAAGTAACAAAAACT+TGG + chr8.2:23857523-23857542 MS.gene011661:intron 20.0%
!! ATAACATTACCCAATATTTA+AGG - chr8.2:23857788-23857807 None:intergenic 20.0%
!! ATTATTCTCTTTGTCAAAAA+AGG + chr8.2:23858098-23858117 MS.gene011661:intron 20.0%
!! ATTCTCTTTAAACTAAACAA+TGG - chr8.2:23858897-23858916 None:intergenic 20.0%
!! CAAATATGGAAATAATTCAT+TGG + chr8.2:23858342-23858361 MS.gene011661:intron 20.0%
!! CAAGATTAGAATATTATGAA+AGG + chr8.2:23857426-23857445 MS.gene011661:intron 20.0%
!! CATATTTAACCCTTAAATAT+TGG + chr8.2:23857775-23857794 MS.gene011661:intron 20.0%
!! CATGATAAGATACTATTTAA+AGG + chr8.2:23858795-23858814 MS.gene011661:intron 20.0%
!! CGTCTATAAATTTCTATATA+TGG - chr8.2:23859333-23859352 None:intergenic 20.0%
!! CTATAAATTTCTATATATGG+GGG - chr8.2:23859330-23859349 None:intergenic 20.0%
!! TAAAAAATAACTTGAGAGAT+AGG - chr8.2:23854375-23854394 None:intergenic 20.0%
!! TAACATTACCCAATATTTAA+GGG - chr8.2:23857787-23857806 None:intergenic 20.0%
!! TGCTTATAATTAAAAACGAA+GGG - chr8.2:23859175-23859194 None:intergenic 20.0%
!! TTGCTTATAATTAAAAACGA+AGG - chr8.2:23859176-23859195 None:intergenic 20.0%
!!! AAGTTATGTTTTGCTTATAA+AGG - chr8.2:23858599-23858618 None:intergenic 20.0%
!!! AATAATTAAAGGAGTATGAA+GGG + chr8.2:23857151-23857170 MS.gene011661:intron 20.0%
!!! AATTTTGAGATAATTTTGTG+TGG + chr8.2:23857558-23857577 MS.gene011661:intron 20.0%
!!! ACAGGTAAATATTTTTTGTA+GGG - chr8.2:23857331-23857350 None:intergenic 20.0%
!!! ATAAGCAAATTTTGACTTTT+AGG + chr8.2:23859188-23859207 MS.gene011661:intron 20.0%
!!! CTTAAATAATGAAAACGTTT+TGG - chr8.2:23858071-23858090 None:intergenic 20.0%
!!! GTATCATGAACTTAAATTTT+AGG + chr8.2:23858238-23858257 MS.gene011661:intron 20.0%
!!! TAATAATTAAAGGAGTATGA+AGG + chr8.2:23857150-23857169 MS.gene011661:intron 20.0%
!!! TAATGTAATAAGTATTGCAT+TGG + chr8.2:23857839-23857858 MS.gene011661:intron 20.0%
!!! TACAGGTAAATATTTTTTGT+AGG - chr8.2:23857332-23857351 None:intergenic 20.0%
!!! TAGAAGTTTCCAATTTTATA+GGG - chr8.2:23857271-23857290 None:intergenic 20.0%
!!! TATTGGGTTAAATATGTTTT+TGG + chr8.2:23857244-23857263 MS.gene011661:intron 20.0%
!!! TCTGTTATTATTTTACAGAT+TGG + chr8.2:23859589-23859608 MS.gene011661:intron 20.0%
!!! TGAACTTTTCATAGTTTATA+TGG + chr8.2:23858504-23858523 MS.gene011661:intron 20.0%
!!! TTAAGGGTTAAATATGTTTT+TGG - chr8.2:23857771-23857790 None:intergenic 20.0%
!!! TTAGAAGTTTCCAATTTTAT+AGG - chr8.2:23857272-23857291 None:intergenic 20.0%
!!! TTAGAGAATATTTCTTCTTT+TGG + chr8.2:23858420-23858439 MS.gene011661:intron 20.0%
!!! TTTTTTGACAAAGAGAATAA+TGG - chr8.2:23858099-23858118 None:intergenic 20.0%
! AAATATTGGGTAATGTTATC+CGG + chr8.2:23857789-23857808 MS.gene011661:intron 25.0%
! AAGATGATGTAGAGAATAAA+TGG - chr8.2:23856504-23856523 None:intergenic 25.0%
! AATATGTGTAATCAATGCAT+CGG - chr8.2:23858773-23858792 None:intergenic 25.0%
! ACCATAATTAGCAAGTATAT+TGG - chr8.2:23857082-23857101 None:intergenic 25.0%
! ATATGTTAATTAGAAGGACA+AGG + chr8.2:23856122-23856141 MS.gene011661:intron 25.0%
! ATCTTCACAAAATCAAAACT+TGG + chr8.2:23855167-23855186 MS.gene011661:CDS 25.0%
! ATTAGCATTTATCTTATACC+GGG - chr8.2:23856045-23856064 None:intergenic 25.0%
! ATTAGTAGAAAAATATGGTC+AGG + chr8.2:23856857-23856876 MS.gene011661:intron 25.0%
! ATTCATACTTAGATAGTGTT+TGG - chr8.2:23859502-23859521 None:intergenic 25.0%
! CATTCAATTAATGATGTATG+TGG - chr8.2:23859252-23859271 None:intergenic 25.0%
! CCATAATTAGCAAGTATATT+GGG - chr8.2:23857081-23857100 None:intergenic 25.0%
! TAATTCTTTAATCAACTTGC+AGG + chr8.2:23854738-23854757 MS.gene011661:intron 25.0%
! TCATGTAAAAGATCACATTA+TGG + chr8.2:23855224-23855243 MS.gene011661:CDS 25.0%
! TGAATGAGAAAGTTGTTTAA+TGG + chr8.2:23859517-23859536 MS.gene011661:intron 25.0%
! TTAGTAGAAAAATATGGTCA+GGG + chr8.2:23856858-23856877 MS.gene011661:intron 25.0%
! TTATAATTAAAAACAGAGGG+AGG + chr8.2:23859293-23859312 MS.gene011661:intron 25.0%
!! ATAACTTTTCTCTTTTTGTG+TGG + chr8.2:23859129-23859148 MS.gene011661:intron 25.0%
!! ATAATTAAAGGAGTATGAAG+GGG + chr8.2:23857152-23857171 MS.gene011661:intron 25.0%
!! CAAAACTTCGAAGTATTTAA+GGG - chr8.2:23857972-23857991 None:intergenic 25.0%
!! GGGTTTTCATAGTAATAAAT+TGG + chr8.2:23858279-23858298 MS.gene011661:intron 25.0%
!! TTGATTTTGTGAAGATTCTT+GGG - chr8.2:23855163-23855182 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr8.2:23858701-23858720 MS.gene011661:intron 25.0%
!!! AAACAAACTTTGTTTTAGCA+GGG - chr8.2:23857363-23857382 None:intergenic 25.0%
!!! AGTTTGTTTTTACAATTGTG+TGG - chr8.2:23859474-23859493 None:intergenic 25.0%
!!! ATTATTTTACAGATTGGTGA+AGG + chr8.2:23859595-23859614 MS.gene011661:intron 25.0%
!!! GTTTTTGGTCGTATAAAATT+AGG - chr8.2:23857756-23857775 None:intergenic 25.0%
!!! TAAACAAACTTTGTTTTAGC+AGG - chr8.2:23857364-23857383 None:intergenic 25.0%
!!! TAGTTGATAACTTTGAATCT+CGG - chr8.2:23856397-23856416 None:intergenic 25.0%
!!! TTTGATTTTGTGAAGATTCT+TGG - chr8.2:23855164-23855183 None:intergenic 25.0%
!!! TTTTGGTTATGTTGTTACTT+TGG - chr8.2:23855002-23855021 None:intergenic 25.0%
AAAAATTTCAGCTTCTTGGT+TGG - chr8.2:23854976-23854995 None:intergenic 30.0%
AAAATGTGTGTTTCCCAAAT+TGG - chr8.2:23855136-23855155 None:intergenic 30.0%
AAATGTGTGTTTCCCAAATT+GGG - chr8.2:23855135-23855154 None:intergenic 30.0%
ACTCTAAGTGAAACATTCAA+TGG + chr8.2:23854910-23854929 MS.gene011661:CDS 30.0%
ACTTGTGTGACATTATATCA+CGG - chr8.2:23856018-23856037 None:intergenic 30.0%
AGGGCTTAATACAAGTAAAA+AGG + chr8.2:23858258-23858277 MS.gene011661:intron 30.0%
AGTTACTTCTTACCTTCTTT+AGG - chr8.2:23855314-23855333 None:intergenic 30.0%
ATATGTGTAATCAATGCATC+GGG - chr8.2:23858772-23858791 None:intergenic 30.0%
ATTGAATGTTTCACTTAGAG+TGG - chr8.2:23854911-23854930 None:intergenic 30.0%
CACTTTCAGTTTCACAATAA+TGG - chr8.2:23856269-23856288 None:intergenic 30.0%
CATTTGTGAATCAACTTAAG+TGG - chr8.2:23854711-23854730 None:intergenic 30.0%
CTAAAACATCACAATCTAAG+AGG + chr8.2:23855193-23855212 MS.gene011661:CDS 30.0%
GGGCTTAATACAAGTAAAAA+GGG + chr8.2:23858259-23858278 MS.gene011661:intron 30.0%
GTCAAAAAATTTCAGCTTCT+TGG - chr8.2:23854980-23854999 None:intergenic 30.0%
GTTTCAGTCAAATTTGAACT+CGG + chr8.2:23854480-23854499 MS.gene011661:intron 30.0%
TATTTAAGGGTCATGTTAAC+CGG - chr8.2:23857959-23857978 None:intergenic 30.0%
TCAACTGTGTCATGTATTAT+GGG - chr8.2:23856694-23856713 None:intergenic 30.0%
TTCAAATGAGTCATCTATTG+CGG + chr8.2:23856905-23856924 MS.gene011661:intron 30.0%
TTTAATCAACTTGCAGGAAA+AGG + chr8.2:23854744-23854763 MS.gene011661:intron 30.0%
! AAGTTGCTGTGAAAAGTTTT+TGG - chr8.2:23855019-23855038 None:intergenic 30.0%
! CCCAATATACTTGCTAATTA+TGG + chr8.2:23857078-23857097 MS.gene011661:intron 30.0%
! GCAAAACTTCGAAGTATTTA+AGG - chr8.2:23857973-23857992 None:intergenic 30.0%
! TATTGTGAAACTGAAAGTGT+TGG + chr8.2:23856270-23856289 MS.gene011661:CDS 30.0%
!! AAGCTAGTATTTAGAGCTTT+TGG - chr8.2:23854592-23854611 None:intergenic 30.0%
!! AAGTGAAGCTCATTTTGAAA+CGG + chr8.2:23855809-23855828 MS.gene011661:intron 30.0%
!! GTTTTTGGACCCTATAAAAT+TGG + chr8.2:23857259-23857278 MS.gene011661:intron 30.0%
!! TTGGCAATTTTAGAAGAAGA+AGG + chr8.2:23856195-23856214 MS.gene011661:CDS 30.0%
!! TTTGAGATAATTTTGTGTGG+AGG + chr8.2:23857561-23857580 MS.gene011661:intron 30.0%
AAACGACACTCATTTGGAAA+CGG - chr8.2:23855599-23855618 None:intergenic 35.0%
AAATTGCGTGAGAGAAAAGT+TGG + chr8.2:23855729-23855748 MS.gene011661:intron 35.0%
AATTAGATAACTACTCCCTC+CGG - chr8.2:23858723-23858742 None:intergenic 35.0%
ACAACACATACAACACATCT+GGG - chr8.2:23855942-23855961 None:intergenic 35.0%
ACTTGTGTGACATTATGTCA+CGG + chr8.2:23855874-23855893 MS.gene011661:intron 35.0%
AGAAAACGAAGAGAGAAACT+TGG + chr8.2:23855252-23855271 MS.gene011661:CDS 35.0%
AGAAGAAGGAAAGAACACAA+AGG + chr8.2:23856209-23856228 MS.gene011661:CDS 35.0%
AGATATCGTTAGATTCGTCT+CGG - chr8.2:23856812-23856831 None:intergenic 35.0%
ATCACAATCTAAGAGGTCTT+TGG + chr8.2:23855200-23855219 MS.gene011661:CDS 35.0%
ATCACGGTGACATTAAATCT+GGG - chr8.2:23856002-23856021 None:intergenic 35.0%
ATGCATTGGGAAGTGAAATT+TGG - chr8.2:23859392-23859411 None:intergenic 35.0%
ATTTATAGACGCGTCACTAA+TGG + chr8.2:23859342-23859361 MS.gene011661:intron 35.0%
ATTTCTTAACATGTGCCCTA+AGG + chr8.2:23858443-23858462 MS.gene011661:intron 35.0%
CAAACCCAACAGAGTTATAT+GGG + chr8.2:23855079-23855098 MS.gene011661:CDS 35.0%
CATATAACTCTGTTGGGTTT+GGG - chr8.2:23855080-23855099 None:intergenic 35.0%
CTCTTGTCTTGGAAAGAAAT+CGG + chr8.2:23854413-23854432 MS.gene011661:intron 35.0%
GATTTCTTTCCAAGACAAGA+GGG - chr8.2:23854414-23854433 None:intergenic 35.0%
GGGTGAATACATATTTGATG+AGG + chr8.2:23854768-23854787 MS.gene011661:CDS 35.0%
GTCAACTGTGTCATGTATTA+TGG - chr8.2:23856695-23856714 None:intergenic 35.0%
GTTTCCCATATAACTCTGTT+GGG - chr8.2:23855086-23855105 None:intergenic 35.0%
TACAATCATTGCTGAGGTAA+AGG + chr8.2:23856467-23856486 MS.gene011661:intron 35.0%
TATCACGGTGACATTAAATC+TGG - chr8.2:23856003-23856022 None:intergenic 35.0%
TATCACGTCTAACATGCATT+GGG - chr8.2:23859405-23859424 None:intergenic 35.0%
TCAAAACATTACTAGCTGCT+TGG + chr8.2:23856068-23856087 MS.gene011661:intron 35.0%
TCAAATGAGTCATCTATTGC+GGG + chr8.2:23856906-23856925 MS.gene011661:intron 35.0%
TCAGTTTCACAATAATGGTC+TGG - chr8.2:23856264-23856283 None:intergenic 35.0%
TCTTGTCTTGGAAAGAAATC+GGG + chr8.2:23854414-23854433 MS.gene011661:intron 35.0%
TGTCAAAAAAGGAATGCTTC+AGG + chr8.2:23858109-23858128 MS.gene011661:intron 35.0%
TGTTTCCCATATAACTCTGT+TGG - chr8.2:23855087-23855106 None:intergenic 35.0%
TTCCTTAATCTGTGTGCAAT+TGG - chr8.2:23855625-23855644 None:intergenic 35.0%
TTTCTTAACATGTGCCCTAA+GGG + chr8.2:23858444-23858463 MS.gene011661:intron 35.0%
! AAAGCTTGCAGTGTGTATTT+TGG - chr8.2:23858203-23858222 None:intergenic 35.0%
! AAGCTTGCAGTGTGTATTTT+GGG - chr8.2:23858202-23858221 None:intergenic 35.0%
! ATGCATTGACATGCGTAATA+GGG - chr8.2:23856717-23856736 None:intergenic 35.0%
! ATTCTGGACGAGTTCTTTTA+TGG - chr8.2:23859632-23859651 None:intergenic 35.0%
! CAGGGAAAAAGATGTTGATT+CGG + chr8.2:23856328-23856347 MS.gene011661:CDS 35.0%
! GGAAATGCATTGTTGTTGTA+GGG - chr8.2:23854887-23854906 None:intergenic 35.0%
! TATGCATTGACATGCGTAAT+AGG - chr8.2:23856718-23856737 None:intergenic 35.0%
! TCGATATTGACTGTGCAAAA+CGG - chr8.2:23854655-23854674 None:intergenic 35.0%
! TGGAAATGCATTGTTGTTGT+AGG - chr8.2:23854888-23854907 None:intergenic 35.0%
!! AATCATTAACTTGTGCCTTG+AGG - chr8.2:23858322-23858341 None:intergenic 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG - chr8.2:23858321-23858340 None:intergenic 35.0%
!!! CGGAGAGAGTATCTTTTTAT+TGG + chr8.2:23856930-23856949 MS.gene011661:intron 35.0%
!!! TCTTTTTTCCTCAAAGGCAA+TGG - chr8.2:23854860-23854879 None:intergenic 35.0%
AAAGGAAGATCAATCGATGG+TGG + chr8.2:23856227-23856246 MS.gene011661:CDS 40.0%
AAATATGGTCAGGGTAAGCT+AGG + chr8.2:23856867-23856886 MS.gene011661:intron 40.0%
AAATGTTAACGAGTGATCCC+GGG - chr8.2:23857118-23857137 None:intergenic 40.0%
AATCAACTTGCAGGAAAAGG+TGG + chr8.2:23854747-23854766 MS.gene011661:intron 40.0%
AATTGTGTGGTGAATTCCCA+TGG - chr8.2:23859461-23859480 None:intergenic 40.0%
ACACGACAAGACATAGTCAT+AGG - chr8.2:23855846-23855865 None:intergenic 40.0%
ACGGAGTTTGATGGAAATCA+CGG - chr8.2:23854636-23854655 None:intergenic 40.0%
ACTCATTCCTGACCTAAAGA+AGG + chr8.2:23855299-23855318 MS.gene011661:CDS 40.0%
AGCCAATTGCACACAGATTA+AGG + chr8.2:23855620-23855639 MS.gene011661:intron 40.0%
ATCAACTTGCAGGAAAAGGT+GGG + chr8.2:23854748-23854767 MS.gene011661:intron 40.0%
ATTAAATCTGGGCCACACAA+AGG + chr8.2:23855901-23855920 MS.gene011661:intron 40.0%
CACAAAGGAAGATCAATCGA+TGG + chr8.2:23856224-23856243 MS.gene011661:CDS 40.0%
CACAACACATACAACACATC+TGG - chr8.2:23855943-23855962 None:intergenic 40.0%
CAGCAATGATTGTAATGTCG+TGG - chr8.2:23856461-23856480 None:intergenic 40.0%
CCAAACCCAACAGAGTTATA+TGG + chr8.2:23855078-23855097 MS.gene011661:CDS 40.0%
CCATATAACTCTGTTGGGTT+TGG - chr8.2:23855081-23855100 None:intergenic 40.0%
CGACATTACAATCATTGCTG+AGG + chr8.2:23856461-23856480 MS.gene011661:CDS 40.0%
CGATTTCTTTCCAAGACAAG+AGG - chr8.2:23854415-23854434 None:intergenic 40.0%
CTATCACGTCTAACATGCAT+TGG - chr8.2:23859406-23859425 None:intergenic 40.0%
CTTCAGGAGAGAAACTAGAA+AGG + chr8.2:23858125-23858144 MS.gene011661:intron 40.0%
CTTCTTACCTTCTTTAGGTC+AGG - chr8.2:23855309-23855328 None:intergenic 40.0%
GAAATCACGACAAAACGCAT+CGG - chr8.2:23854570-23854589 None:intergenic 40.0%
GAAATGTTAACGAGTGATCC+CGG - chr8.2:23857119-23857138 None:intergenic 40.0%
GAATGTTTCACTTAGAGTGG+TGG - chr8.2:23854908-23854927 None:intergenic 40.0%
GATCCACTCGTTGTAAATTG+GGG + chr8.2:23857177-23857196 MS.gene011661:intron 40.0%
GCATTTATCTTATACCGGGT+TGG - chr8.2:23856041-23856060 None:intergenic 40.0%
GGATCCACTCGTTGTAAATT+GGG + chr8.2:23857176-23857195 MS.gene011661:intron 40.0%
GTCACGGTGACATTAAATCT+GGG + chr8.2:23855890-23855909 MS.gene011661:intron 40.0%
GTCATGTATTATGGGACGAA+GGG - chr8.2:23856686-23856705 None:intergenic 40.0%
GTTGTCAAAAGACGACTGAA+AGG - chr8.2:23855058-23855077 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr8.2:23858705-23858724 MS.gene011661:intron 40.0%
TGGCTAAAACGACACTCATT+TGG - chr8.2:23855605-23855624 None:intergenic 40.0%
TGTCACGGTGACATTAAATC+TGG + chr8.2:23855889-23855908 MS.gene011661:intron 40.0%
TGTCATGTATTATGGGACGA+AGG - chr8.2:23856687-23856706 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr8.2:23858704-23858723 MS.gene011661:intron 40.0%
TTGTCTTAACCCTCTTGTCT+TGG + chr8.2:23854402-23854421 MS.gene011661:intron 40.0%
! AATGATAACTTGTGCCCTCA+AGG + chr8.2:23858304-23858323 MS.gene011661:intron 40.0%
! ATCCACTGCAAAAAGCATGA+TGG + chr8.2:23856351-23856370 MS.gene011661:CDS 40.0%
! ATGTAGCTTTTGCTTTGCCA+TGG + chr8.2:23859441-23859460 MS.gene011661:intron 40.0%
! ATTAAAGGAGTATGAAGGGG+CGG + chr8.2:23857155-23857174 MS.gene011661:intron 40.0%
! TCAGTGTCATTGCCCAATTT+GGG + chr8.2:23855120-23855139 MS.gene011661:CDS 40.0%
! TGTAGCTTTTGCTTTGCCAT+GGG + chr8.2:23859442-23859461 MS.gene011661:intron 40.0%
! TTAGCAGGGACTAAAAGTAC+AGG - chr8.2:23857349-23857368 None:intergenic 40.0%
! TTCAGTGTCATTGCCCAATT+TGG + chr8.2:23855119-23855138 MS.gene011661:CDS 40.0%
!! AGTGTTAACTTGTGCCCTTA+GGG - chr8.2:23858461-23858480 None:intergenic 40.0%
!! CAGCAGCTTGTTATCTGATT+TGG + chr8.2:23854333-23854352 MS.gene011661:CDS 40.0%
!! TAGTGTTAACTTGTGCCCTT+AGG - chr8.2:23858462-23858481 None:intergenic 40.0%
!!! GAAGCTCATTTTGAAACGGT+GGG + chr8.2:23855813-23855832 MS.gene011661:intron 40.0%
!!! GGTCTCTCTTTTTTCCTCAA+AGG - chr8.2:23854866-23854885 None:intergenic 40.0%
!!! TGAAGCTCATTTTGAAACGG+TGG + chr8.2:23855812-23855831 MS.gene011661:intron 40.0%
AAAGACGACTGAAAGGTGGA+TGG - chr8.2:23855051-23855070 None:intergenic 45.0%
AAATGTTAACCAGTGCCCCA+GGG - chr8.2:23858834-23858853 None:intergenic 45.0%
AACGCTCTTTAAGCTCTCTG+AGG - chr8.2:23856176-23856195 None:intergenic 45.0%
AAGCTATAACCTTGCCAGCT+CGG + chr8.2:23858042-23858061 MS.gene011661:intron 45.0%
AATGTCACACAAGTCCAACC+CGG + chr8.2:23856024-23856043 MS.gene011661:intron 45.0%
AATGTTAACGAGTGATCCCG+GGG - chr8.2:23857117-23857136 None:intergenic 45.0%
ACACATTGCCACACAACATC+TGG - chr8.2:23855970-23855989 None:intergenic 45.0%
AGAGTTTCTCTCACGTGACA+TGG + chr8.2:23854828-23854847 MS.gene011661:CDS 45.0%
AGATTCCTTAACCAGTGTCC+CGG - chr8.2:23857820-23857839 None:intergenic 45.0%
ATGAGTCATCTATTGCGGGA+CGG + chr8.2:23856910-23856929 MS.gene011661:intron 45.0%
ATGGTCCTTAAAGAGATCCC+CGG + chr8.2:23857097-23857116 MS.gene011661:intron 45.0%
ATTGGGCAATGACACTGAAG+TGG - chr8.2:23855118-23855137 None:intergenic 45.0%
CACAACACAACACCTTTGTG+TGG - chr8.2:23855916-23855935 None:intergenic 45.0%
CACATTGCCACACAACATCT+GGG - chr8.2:23855969-23855988 None:intergenic 45.0%
CATGTGTGCAACAATCAACG+AGG - chr8.2:23855376-23855395 None:intergenic 45.0%
CGGATCCACTCGTTGTAAAT+TGG + chr8.2:23857175-23857194 MS.gene011661:intron 45.0%
CGTGAGAGAAAAGTTGGAGA+GGG + chr8.2:23855735-23855754 MS.gene011661:intron 45.0%
CTGTCTGCTGATATGTTCGT+TGG - chr8.2:23854316-23854335 None:intergenic 45.0%
CTGTGCAAAACGGAGTTTGA+TGG - chr8.2:23854645-23854664 None:intergenic 45.0%
GACACTCATTTGGAAACGGA+TGG - chr8.2:23855595-23855614 None:intergenic 45.0%
GTCAAAAGACGACTGAAAGG+TGG - chr8.2:23855055-23855074 None:intergenic 45.0%
GTCATGTTAACCGGTGTTTC+TGG - chr8.2:23857950-23857969 None:intergenic 45.0%
TAAATGTTAACCAGTGCCCC+AGG - chr8.2:23858835-23858854 None:intergenic 45.0%
TCTTGTTAACGAGTGCCTCA+GGG + chr8.2:23856969-23856988 MS.gene011661:intron 45.0%
TGGCATGTTTGGATCAGCAT+TGG + chr8.2:23859362-23859381 MS.gene011661:intron 45.0%
TGTCCCCAATTTACAACGAG+TGG - chr8.2:23857183-23857202 None:intergenic 45.0%
TTCTTGTTAACGAGTGCCTC+AGG + chr8.2:23856968-23856987 MS.gene011661:intron 45.0%
! ACTTCGAAGTTTTGCTCCAC+AGG + chr8.2:23857978-23857997 MS.gene011661:intron 45.0%
! TGGTGATGCTACTGCTATCA+GGG + chr8.2:23856290-23856309 MS.gene011661:CDS 45.0%
!! AGGGTAGAAGCAAAAGTGTC+AGG + chr8.2:23856309-23856328 MS.gene011661:CDS 45.0%
!! CACAAAGGTGTTGTGTTGTG+TGG + chr8.2:23855916-23855935 MS.gene011661:intron 45.0%
!! CAGAGAGCTTAAAGAGCGTT+TGG + chr8.2:23856176-23856195 MS.gene011661:CDS 45.0%
!! GGGTAGAAGCAAAAGTGTCA+GGG + chr8.2:23856310-23856329 MS.gene011661:CDS 45.0%
!! GTCCATCATGCTTTTTGCAG+TGG - chr8.2:23856356-23856375 None:intergenic 45.0%
!! TGCAGTGTGTATTTTGGGTG+TGG - chr8.2:23858197-23858216 None:intergenic 45.0%
!! TGTTTCTGGAGCACTGGTTA+AGG - chr8.2:23857936-23857955 None:intergenic 45.0%
!! TTGGTGATGCTACTGCTATC+AGG + chr8.2:23856289-23856308 MS.gene011661:CDS 45.0%
!!! AAACGTTTTGGTTACCGAGC+TGG - chr8.2:23858059-23858078 None:intergenic 45.0%
!! TTAAATAATCATTAAATATT+GGG + chr8.2:23857228-23857247 MS.gene011661:intron 5.0%
!! TTTAAATAATCATTAAATAT+TGG + chr8.2:23857227-23857246 MS.gene011661:intron 5.0%
!!! TAAAAAATAATTGTTTATTT+TGG - chr8.2:23857011-23857030 None:intergenic 5.0%
AACCAGTGCTCCAGAAACAC+CGG + chr8.2:23857937-23857956 MS.gene011661:intron 50.0%
AATGTTAACCAGTGCCCCAG+GGG - chr8.2:23858833-23858852 None:intergenic 50.0%
ACCAGACACATGCAGACAAG+AGG - chr8.2:23854508-23854527 None:intergenic 50.0%
ACTCGTCCAGAATCTACGCA+TGG + chr8.2:23859639-23859658 MS.gene011661:CDS 50.0%
ATGCTGCCATGCGTAGATTC+TGG - chr8.2:23859648-23859667 None:intergenic 50.0%
ATTCCTTAACCAGTGTCCCG+GGG - chr8.2:23857818-23857837 None:intergenic 50.0%
CGCGTCACTAATGGCATGTT+TGG + chr8.2:23859351-23859370 MS.gene011661:intron 50.0%
CTTGTTAACGAGTGCCTCAG+GGG + chr8.2:23856970-23856989 MS.gene011661:intron 50.0%
GATTCCTTAACCAGTGTCCC+GGG - chr8.2:23857819-23857838 None:intergenic 50.0%
GCGTGAGAGAAAAGTTGGAG+AGG + chr8.2:23855734-23855753 MS.gene011661:intron 50.0%
GTGTGGCAATGTGTGTTGTG+TGG + chr8.2:23855976-23855995 MS.gene011661:intron 50.0%
TCCTCTTGTCTGCATGTGTC+TGG + chr8.2:23854504-23854523 MS.gene011661:intron 50.0%
TGATCCCGGGGATCTCTTTA+AGG - chr8.2:23857105-23857124 None:intergenic 50.0%
TGGTCCTTAAAGAGATCCCC+GGG + chr8.2:23857098-23857117 MS.gene011661:intron 50.0%
TGTGTGTCCCAGATGTTGTG+TGG + chr8.2:23855959-23855978 MS.gene011661:intron 50.0%
! GAACTTGCTTGATGCTGACG+TGG + chr8.2:23854801-23854820 MS.gene011661:CDS 50.0%
! GAGTGTTGCAAGAGCAACGA+AGG - chr8.2:23855283-23855302 None:intergenic 50.0%
!! TAGCTTAAAGAGTGCCCCTG+AGG - chr8.2:23856987-23857006 None:intergenic 50.0%
!! TTTTGGTTACCGAGCTGGCA+AGG - chr8.2:23858054-23858073 None:intergenic 50.0%
AAGGCCTTAACTAGTGCCCC+TGG + chr8.2:23858814-23858833 MS.gene011661:intron 55.0%
AGGCCTTAACTAGTGCCCCT+GGG + chr8.2:23858815-23858834 MS.gene011661:intron 55.0%
GTAATGTTATCCGGTGCCCC+CGG + chr8.2:23857798-23857817 MS.gene011661:intron 55.0%
TAATGTTATCCGGTGCCCCC+GGG + chr8.2:23857799-23857818 MS.gene011661:intron 55.0%
TGAGCTGTGTGAGAGTCCTG+TGG - chr8.2:23857997-23858016 None:intergenic 55.0%
TTCCTTAACCAGTGTCCCGG+GGG - chr8.2:23857817-23857836 None:intergenic 55.0%
! GGCTAGTGCCATTGCCTTTG+AGG + chr8.2:23854849-23854868 MS.gene011661:CDS 55.0%
!! AACCGGTGTTTCTGGAGCAC+TGG - chr8.2:23857942-23857961 None:intergenic 55.0%
GGCCTTAACTAGTGCCCCTG+GGG + chr8.2:23858816-23858835 MS.gene011661:intron 60.0%
!! TGCCCCAGGGGCACTAGTTA+AGG - chr8.2:23858821-23858840 None:intergenic 60.0%
AACTAGTGCCCCTGGGGCAC+TGG + chr8.2:23858822-23858841 MS.gene011661:intron 65.0%
! TGCCCCCGGGACACTGGTTA+AGG + chr8.2:23857812-23857831 MS.gene011661:intron 65.0%
! AACCAGTGTCCCGGGGGCAC+CGG - chr8.2:23857811-23857830 None:intergenic 70.0%
ATCCGGTGCCCCCGGGACAC+TGG + chr8.2:23857806-23857825 MS.gene011661:intron 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 23854292 23859687 23854292 ID=MS.gene011661
chr8.2 mRNA 23854292 23859687 23854292 ID=MS.gene011661.t1;Parent=MS.gene011661
chr8.2 exon 23854292 23854354 23854292 ID=MS.gene011661.t1.exon1;Parent=MS.gene011661.t1
chr8.2 CDS 23854292 23854354 23854292 ID=cds.MS.gene011661.t1;Parent=MS.gene011661.t1
chr8.2 exon 23854760 23855320 23854760 ID=MS.gene011661.t1.exon2;Parent=MS.gene011661.t1
chr8.2 CDS 23854760 23855320 23854760 ID=cds.MS.gene011661.t1;Parent=MS.gene011661.t1
chr8.2 exon 23856135 23856482 23856135 ID=MS.gene011661.t1.exon3;Parent=MS.gene011661.t1
chr8.2 CDS 23856135 23856482 23856135 ID=cds.MS.gene011661.t1;Parent=MS.gene011661.t1
chr8.2 exon 23859607 23859687 23859607 ID=MS.gene011661.t1.exon4;Parent=MS.gene011661.t1
chr8.2 CDS 23859607 23859687 23859607 ID=cds.MS.gene011661.t1;Parent=MS.gene011661.t1
Gene Sequence

>MS.gene011661

ATGGAGGAAATCAACAACATACCAACGAACATATCAGCAGACAGCAGCTTGTTATCTGATTTGGTGAGAAATTCATACTTCCTATCTCTCAAGTTATTTTTTATTTTTTTTTGTCTTAACCCTCTTGTCTTGGAAAGAAATCGGGTAATTTGTAGTTCAATCTGACTGTAAAAAAAGTTTAACTAGTTGTTTCAGTCAAATTTGAACTCGGATCCTCTTGTCTGCATGTGTCTGGTTTTCTATTTGCAACACATAAAATCATGTTTGCACGTTGTCCGATGCGTTTTGTCGTGATTTCCAAAAGCTCTAAATACTAGCTTCTATACTAACTTGACTTTTTGCCGTGATTTCCATCAAACTCCGTTTTGCACAGTCAATATCGAACATAGACTTTATCTTTCACTAAAGTTCATTAACCACTTAAGTTGATTCACAAATGATTTTAATAATTCTTTAATCAACTTGCAGGAAAAGGTGGGTGAATACATATTTGATGAGGAATGCTACTTGAACTTGCTTGATGCTGACGTGGTAGAAGAGTTTCTCTCACGTGACATGGCTAGTGCCATTGCCTTTGAGGAAAAAAGAGAGACCCTACAACAACAATGCATTTCCACCACTCTAAGTGAAACATTCAATGGTGAAACAAGTTTTGAGTCTTTTGACTTTGATTTTGAGAATCCAACCAAGAAGCTGAAATTTTTTGACCAAAGTAACAACATAACCAAAAACTTTTCACAGCAACTTTCTGCATCTCCATCCACCTTTCAGTCGTCTTTTGACAACCCAAACCCAACAGAGTTATATGGGAAACAAAAAGAAACCACTTCAGTGTCATTGCCCAATTTGGGAAACACACATTTTTCAGCCCAAGAATCTTCACAAAATCAAAACTTGGAAACTAAAACATCACAATCTAAGAGGTCTTTGGATCATGTAAAAGATCACATTATGGTCGAGAGAAAACGAAGAGAGAAACTTGGTCAAGCCTTCGTTGCTCTTGCAACACTCATTCCTGACCTAAAGAAGGTAAGAAGTAACTGTTAGTAGATAACTCTAGATCTAGTTTCAAAACAAGTTACCTCGTTGATTGTTGCACACATGCTAATAGACATATTTAACTTATATCTTTAACTATGTATTAGCAAAACTTACTGAAATTAACTCTCTTTTTTGAAAATATTTGTCGAAACTTATAAAACTTATATATGCTACAATTTATCAAAGTATCTTATTGTTATATGTTATATACATGTTAATGTAGTTAAATTTGACCACTTTAATTTTCTTAAATTATACTCCATCCGTTTCCAAATGAGTGTCGTTTTAGCCAATTGCACACAGATTAAGGAATAAAATGAAATAATCATTAGACATAACACTTTTACTAAACTGCCCTTACTTTATAAGAAAAATACAAACTTAAAGTTGCATTGAAAATTGCGTGAGAGAAAAGTTGGAGAGGGTAAAGTTGAAAATGTAAAGCGACATTCATTTTGAAAATTTTTTTTTGGCTAAAGTGAAGCTCATTTTGAAACGGTGGGAGTACAACCTATGACTATGTCTTGTCGTGTCACTTAAGACTTGTGTGACATTATGTCACGGTGACATTAAATCTGGGCCACACAAAGGTGTTGTGTTGTGTGGCCCAGATGTGTTGTATGTGTTGTGTGTCCCAGATGTTGTGTGGCAATGTGTGTTGTGTGGCCCAGATTTAATGTCACCGTGATATAATGTCACACAAGTCCAACCCGGTATAAGATAAATGCTAATTCATCAAAACATTACTAGCTGCTTGGTTAGTCTCACTAATTACTAGTCACGTGTAAAATATGTTAATTAGAAGGACAAGGCTTCAGTATTAGCAGATACAATCAAATACCTCAGAGAGCTTAAAGAGCGTTTGGCAATTTTAGAAGAAGAAGGAAAGAACACAAAGGAAGATCAATCGATGGTGGTTTCTAACAAACCAGACCATTATTGTGAAACTGAAAGTGTTGGTGATGCTACTGCTATCAGGGTAGAAGCAAAAGTGTCAGGGAAAAAGATGTTGATTCGGATCCACTGCAAAAAGCATGATGGACTTCTTGTTAAAGTCATCACCGAGATTCAAAGTTATCAACTATTAGTTGTCAATAATCGTATTTTAACATTTGGAGATTCTTTCCACGACATTACAATCATTGCTGAGGTAAAGGACATTCTCTTTCCATTTATTCTCTACATCATCTTTTAAAAAAAAATATTAATACTCTTTTTATATACCATCTTTTACTAATAAAATATCCATGTCATAAAGTTTATTTTGTTATGACTTTTGTTGCTGAGTAATAATATTTATACAACTATATGATAACATCGACAACTATTATGACAATCTTCTTTTTTACTCCCTTCGTCCCATAATACATGACACAGTTGACCCTATTACGCATGTCAATGCATAATTTTGAGCTTAAATATCTTGAATAATATGTTAGAAAAAATTATGAAAATTTGATATTTTGAAAATACTCACCGAGACGAATCTAACGATATCTTATATGATATTATTTATCTTTGTATATTAGTAGAAAAATATGGTCAGGGTAAGCTAGGTCAAAATTGCAAATTTTCAAATGAGTCATCTATTGCGGGACGGAGAGAGTATCTTTTTATTGGTAAAAAAAATAAAGGTTCTTGTTAACGAGTGCCTCAGGGGCACTCTTTAAGCTATCCAAAATAAACAATTATTTTTTAAAAAAGTCAAACATTTCAATTTCCAAGATATTAATTACATGCATTTTCCCAATATACTTGCTAATTATGGTCCTTAAAGAGATCCCCGGGATCACTCGTTAACATTTCCAAAAAATAAATAATAATTAAAGGAGTATGAAGGGGCGGATCCACTCGTTGTAAATTGGGGACAACTGACACACAAGCTTAATTATTTTTTAAATAATCATTAAATATTGGGTTAAATATGTTTTTGGACCCTATAAAATTGGAAACTTCTAAGTCTAGTCCTTACTTAATTTTAATAGCATTTTTAGTCCCTACAAAAAATATTTACCTGTACTTTTAGTCCCTGCTAAAACAAAGTTTGTTTAATTATCCTTAAACTCTTAAATTTTTGAACGATTTTTTTTAGGCAAGATTAGAATATTATGAAAGGTTCATTTACTAAAATTCAGATATTTTTAACATGAAATGAATTAAATATGAATTTTTTAAAACGAAAAAAGTTTAAGTTAAAAGTAACAAAAACTTGGATGTAGAAATCAAATTTTGAGATAATTTTGTGTGGAGGAACATTTAGTAATGTTGTTAACGCTTCTACAAAAAAATTGTTCAAAAACTTAAGAGCTTAAGCATAATTAAACAAATTTGAATTTACTAGGGACTAAAACTGAGTGCAGAAGTTTTTAATATGAACTAAAAAACCTATTAAAATTAAGTAATGACTAAACTTAGAAAGTCCTAATTTTATACGACCAAAAACATATTTAACCCTTAAATATTGGGTAATGTTATCCGGTGCCCCCGGGACACTGGTTAAGGAATCTAATGTAATAAGTATTGCATTGGAACATGTGTTTTCAACTTCTCAAAAGCATAAAAAAATGTTATTTTCATTTTAAAATTTCTTTTTTTAGATTCCTTAACCAGTGCTCCAGAAACACCGGTTAACATGACCCTTAAATACTTCGAAGTTTTGCTCCACAGGACTCTCACACAGCTCAACTTATGAAAACTTACGATTGAAAAAAGCTATAACCTTGCCAGCTCGGTAACCAAAACGTTTTCATTATTTAAGAGAAGCCATTATTCTCTTTGTCAAAAAAGGAATGCTTCAGGAGAGAAACTAGAAAGGTTTCAGCGAATGAAATAAATTAATAAATAAATAAAATACTTCTCTACCACACCCAAAATACACACTGCAAGCTTTCTACTCCTATTTTTTGTATCATGAACTTAAATTTTAGGGCTTAATACAAGTAAAAAGGGTTTTCATAGTAATAAATTGGAAAATGATAACTTGTGCCCTCAAGGCACAAGTTAATGATTCAAATATGGAAATAATTCATTGGAATGTGTGCAATACATTTAATCATTAACTTTTTAATCAATTAAATGCACAAAATTTTAGAGAATATTTCTTCTTTTGGATTTCTTAACATGTGCCCTAAGGGCACAAGTTAACACTACCCTAATAAATTTTGTGAAATATGAACTTTTCATAGTTTATATGGAGATAGATTTTTGAATGATTGTCTAGAGTAGTAATATTTGATAGTGTTAAAAGATACTCCCTCCGGTCACCTTTATAAGCAAAACATAACTTTTTAGATACATTGAATGATTAATGTATCTAACATATAAATGTGACTACATACATTAATTATTCAATGTATCTAAAAAAGTGTTTTTTGCTTATAAATGTGACCGGAGGGAGTAGTTATCTAATTTTATAATAAAGTCAAATGTTTCGATTCCCGATGCATTGATTACACATATTTTCATGATAAGATACTATTTAAAGGCCTTAACTAGTGCCCCTGGGGCACTGGTTAACATTTACCTTTTTTTTTATATGTAATGCAATAATTTTTTTTATCTCCATTGTTTAGTTTAAAGAGAATGATATCATCATTTTATCGTTTAAACATTTATATAATTTTGTATGAAAACCACTGTTTTCTCATTTATATTTGAGAATCTATTTCTCAAATATTCACTCATTTTCTTATTTGATAAAAAATTAGGTCCATATTTTAGAAATAGATTCTACGTAAAGTCGTGAAACCCATATGAATTTCATCTAATAAAAGAGTGAATATTTGAGAGAATATTCATAACTTTTCTCTTTTTGTGTGGATTTCTTAATAAATACTACTCCCTTCGTTTTTAATTATAAGCAAATTTTGACTTTTAGGTTCATTTAATTAATGATATATGTGGTCTATATTATAGTCCACATACATCATTAATTGAATGAACCTAAAAGTCAAAATTTACTTATAATTAAAAACAGAGGGAGGAAATCACTATGCCCCCATATATAGAAATTTATAGACGCGTCACTAATGGCATGTTTGGATCAGCATTGGCATGCCAAATTTCACTTCCCAATGCATGTTAGACGTGATAGTTATGAAGCTACAATATGTAGCTTTTGCTTTGCCATGGGAATTCACCACACAATTGTAAAAACAAACTTGTATCCAAACACTATCTAAGTATGAATGAGAAAGTTGTTTAATGGTTGTATAATTTCTCTCTGTCGTCACTACTTATTTGTATTGATTGTTAATTCTGTTATTATTTTACAGATTGGTGAAGGCTACAACTTGACCATAAAAGAACTCGTCCAGAATCTACGCATGGCAGCATTGAAGTTTATGTCATCGTAA
Protein sequence

>MS.gene011661.t1

MEEINNIPTNISADSSLLSDLEKVGEYIFDEECYLNLLDADVVEEFLSRDMASAIAFEEKRETLQQQCISTTLSETFNGETSFESFDFDFENPTKKLKFFDQSNNITKNFSQQLSASPSTFQSSFDNPNPTELYGKQKETTSVSLPNLGNTHFSAQESSQNQNLETKTSQSKRSLDHVKDHIMVERKRREKLGQAFVALATLIPDLKKKDKASVLADTIKYLRELKERLAILEEEGKNTKEDQSMVVSNKPDHYCETESVGDATAIRVEAKVSGKKMLIRIHCKKHDGLLVKVITEIQSYQLLVVNNRILTFGDSFHDITIIAEIGEGYNLTIKELVQNLRMAALKFMSS