AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011683

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011683.t1 MTR_4g097600 98.524 271 3 1 1 270 1 271 0.0 550
MS.gene011683.t1 MTR_5g014890 63.860 285 73 8 1 270 1 270 1.27e-102 300
MS.gene011683.t1 MTR_1g054285 62.963 189 48 4 68 255 116 283 3.64e-72 223
MS.gene011683.t1 MTR_2g061030 76.119 134 31 1 108 240 180 313 1.79e-67 213
MS.gene011683.t1 MTR_7g093430 76.984 126 27 1 115 240 150 273 1.08e-65 207
MS.gene011683.t1 MTR_5g013010 68.293 164 42 4 79 240 95 250 2.89e-65 206
MS.gene011683.t1 MTR_1g017090 45.847 301 114 9 5 270 2 288 7.76e-65 204
MS.gene011683.t1 MTR_4g100550 66.667 162 41 2 80 240 85 234 1.01e-64 204
MS.gene011683.t1 MTR_8g006705 82.456 114 19 1 126 238 145 258 7.68e-62 197
MS.gene011683.t1 MTR_3g103590 54.124 194 64 6 90 268 117 300 7.21e-50 166
MS.gene011683.t1 MTR_4g084750 63.866 119 37 1 126 238 64 182 1.02e-48 160
MS.gene011683.t1 MTR_2g038625 44.211 190 93 4 54 239 15 195 1.38e-39 137
MS.gene011683.t1 MTR_2g038580 44.211 190 93 4 54 239 15 195 1.38e-39 137
MS.gene011683.t1 MTR_4g126900 59.649 114 42 2 129 238 90 203 3.93e-35 125
MS.gene011683.t1 MTR_5g013010 62.376 101 29 3 79 178 95 187 6.36e-28 106
MS.gene011683.t1 MTR_5g039000 47.664 107 54 1 114 218 62 168 4.36e-21 90.5
MS.gene011683.t1 MTR_7g103340 42.991 107 61 0 108 214 44 150 1.72e-20 87.8
MS.gene011683.t1 MTR_3g080100 35.417 192 112 5 80 261 12 201 3.59e-20 87.4
MS.gene011683.t1 MTR_3g080100 38.365 159 88 4 113 261 4 162 6.80e-20 85.9
MS.gene011683.t1 MTR_8g468210 42.735 117 64 1 102 218 55 168 1.16e-19 86.7
MS.gene011683.t1 MTR_7g010020 46.602 103 51 1 118 216 71 173 5.28e-19 84.3
MS.gene011683.t1 MTR_6g007647 50.000 88 44 0 127 214 33 120 6.63e-19 84.0
MS.gene011683.t1 MTR_1g061660 48.315 89 46 0 127 215 59 147 6.66e-19 83.6
MS.gene011683.t1 MTR_6g007647 50.000 88 44 0 127 214 67 154 7.53e-19 84.3
MS.gene011683.t1 MTR_4g107650 45.455 99 54 0 116 214 84 182 2.58e-17 80.9
MS.gene011683.t1 MTR_8g089895 47.170 106 47 2 118 214 43 148 3.35e-17 80.1
MS.gene011683.t1 MTR_3g086790 37.975 158 85 5 119 265 52 207 4.38e-17 79.7
MS.gene011683.t1 MTR_6g011610 45.192 104 49 2 118 213 86 189 8.59e-17 78.6
MS.gene011683.t1 MTR_5g038280 40.000 135 65 3 87 213 54 180 9.78e-17 79.0
MS.gene011683.t1 MTR_6g011610 45.192 104 49 2 118 213 67 170 1.60e-16 77.4
MS.gene011683.t1 MTR_8g469430 46.809 94 43 1 127 213 89 182 7.67e-16 75.9
MS.gene011683.t1 MTR_5g019680 43.689 103 53 1 119 221 45 142 1.10e-12 65.9
MS.gene011683.t1 MTR_5g019650 42.857 105 58 1 119 221 45 149 1.19e-12 65.9
MS.gene011683.t1 MTR_3g092150 43.011 93 46 1 130 215 41 133 3.41e-12 65.1
MS.gene011683.t1 MTR_8g026960 42.683 82 47 0 131 212 38 119 2.27e-11 62.8
MS.gene011683.t1 MTR_5g029320 35.849 106 68 0 118 223 83 188 5.00e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011683.t1 AT4G37790 61.806 288 82 9 1 270 1 278 2.52e-91 271
MS.gene011683.t1 AT2G22800 58.163 294 79 11 1 270 1 274 2.54e-83 251
MS.gene011683.t1 AT5G06710 61.376 189 56 4 76 254 136 317 4.81e-70 219
MS.gene011683.t1 AT5G47370 57.789 199 74 4 72 264 70 264 1.69e-66 208
MS.gene011683.t1 AT3G60390 60.656 183 57 6 69 238 94 274 1.18e-62 199
MS.gene011683.t1 AT4G17460 60.221 181 64 5 68 241 71 250 4.60e-62 197
MS.gene011683.t1 AT4G16780 75.194 129 30 2 112 239 115 242 1.93e-61 196
MS.gene011683.t1 AT2G44910 79.130 115 23 1 126 239 162 276 6.97e-59 190
MS.gene011683.t1 AT2G01430 54.676 139 56 2 106 239 113 249 2.34e-44 151
MS.gene011683.t1 AT1G70920 52.941 136 57 1 114 249 26 154 1.00e-40 139
MS.gene011683.t1 AT1G70920 56.349 126 48 1 114 239 56 174 1.15e-40 140
MS.gene011683.t1 AT5G06710 59.292 113 29 4 76 178 136 241 4.89e-30 114
MS.gene011683.t1 AT2G01430 50.526 95 40 2 106 195 113 205 1.10e-22 93.2
MS.gene011683.t1 AT1G69780 46.465 99 53 0 116 214 74 172 7.38e-20 87.4
MS.gene011683.t1 AT1G26960 41.964 112 65 0 119 230 63 174 2.17e-19 85.1
MS.gene011683.t1 AT5G03790 35.374 147 79 2 127 257 77 223 3.68e-18 81.6
MS.gene011683.t1 AT5G65310 45.000 100 48 1 122 214 67 166 1.57e-16 78.2
MS.gene011683.t1 AT3G01470 45.161 93 44 1 127 212 68 160 1.78e-16 77.4
MS.gene011683.t1 AT5G65310 45.000 100 48 1 122 214 49 148 1.94e-16 77.8
MS.gene011683.t1 AT2G18550 44.000 100 56 0 114 213 48 147 7.98e-16 74.7
MS.gene011683.t1 AT5G03790 47.253 91 48 0 127 217 77 167 9.56e-16 73.9
MS.gene011683.t1 AT5G15150 42.478 113 56 3 113 216 96 208 1.30e-15 75.9
MS.gene011683.t1 AT4G36740 44.681 94 52 0 120 213 49 142 2.37e-15 73.6
MS.gene011683.t1 AT4G36740 44.681 94 52 0 120 213 48 141 2.40e-15 73.6
MS.gene011683.t1 AT4G40060 44.330 97 47 1 125 214 57 153 2.51e-15 74.7
MS.gene011683.t1 AT3G01220 43.269 104 53 2 119 216 77 180 2.86e-15 74.3
MS.gene011683.t1 AT1G27045 46.875 96 44 1 127 215 68 163 4.71e-15 73.2
MS.gene011683.t1 AT1G27045 40.909 132 62 3 127 250 68 191 5.84e-15 72.4
MS.gene011683.t1 AT1G27045 57.576 66 28 0 127 192 17 82 8.74e-15 70.9
MS.gene011683.t1 AT1G27045 57.576 66 28 0 127 192 25 90 9.52e-15 71.2
MS.gene011683.t1 AT1G27045 57.576 66 28 0 127 192 25 90 9.52e-15 71.2
MS.gene011683.t1 AT2G36610 40.816 98 50 1 126 215 70 167 3.36e-14 69.7
MS.gene011683.t1 AT2G22430 43.750 96 50 1 125 216 60 155 7.44e-14 70.5
MS.gene011683.t1 AT2G46680 43.011 93 49 1 130 218 35 127 1.54e-13 68.9
MS.gene011683.t1 AT2G46680 41.111 90 53 0 130 219 35 124 1.55e-13 68.9
MS.gene011683.t1 AT5G06710 51.163 86 25 4 76 151 136 214 4.06e-12 64.7
MS.gene011683.t1 AT5G06710 51.163 86 25 4 76 151 136 214 4.06e-12 64.7
MS.gene011683.t1 AT3G61890 38.947 95 44 1 130 210 33 127 2.70e-11 62.4
MS.gene011683.t1 AT5G66700 44.872 78 43 0 115 192 59 136 6.51e-11 61.2
MS.gene011683.t1 AT1G79840 43.373 83 46 1 126 207 102 184 9.69e-11 62.4

Find 59 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAGAGAAATTGCTCTTAT+TGG 0.187884 8.3:-22634395 None:intergenic
CTAGGTGGTGGTGGTGTTAA+TGG 0.243245 8.3:+22634364 MS.gene011683:CDS
TCAGGCCTTCAACTTATTCT+AGG 0.257483 8.3:+22633129 MS.gene011683:CDS
ATGTTTCACAACATTTCTTT+AGG 0.284664 8.3:-22634219 None:intergenic
AAAGGAGGTGCAAGAATTAA+AGG 0.295896 8.3:+22634267 MS.gene011683:CDS
GGTACCTGGCTCTACGGTTC+TGG 0.335278 8.3:-22633704 None:intergenic
TTATGATTACTTGAGGAATA+AGG 0.345806 8.3:-22633210 None:intergenic
AAGCATAGCAGATTGATCTT+TGG 0.351274 8.3:-22633490 None:intergenic
GGATGGTGGTGTGTCTTGTT+TGG 0.360529 8.3:-22633169 None:intergenic
CACATGAAGGGCACATAGTA+AGG 0.379041 8.3:-22634336 None:intergenic
TGTTAGCAGTGAATTAGAAA+TGG 0.445208 8.3:+22633380 MS.gene011683:CDS
AGGCTTTGTAACGTTGTTGT+TGG 0.454137 8.3:-22633190 None:intergenic
AAACATTAACAGAAGAGAAT+AGG 0.467293 8.3:+22634236 MS.gene011683:CDS
GCTGAACCATCTTTAACGTT+GGG 0.469771 8.3:+22633243 MS.gene011683:CDS
TTCCTCTTTCTCTAGTGGGA+GGG 0.480454 8.3:+22633341 MS.gene011683:CDS
TTGTTTCCTCTTTCTCTAGT+GGG 0.482881 8.3:+22633337 MS.gene011683:CDS
AGCTGAACCATCTTTAACGT+TGG 0.482898 8.3:+22633242 MS.gene011683:CDS
CACCCTCCCACTAGAGAAAG+AGG 0.485237 8.3:-22633343 None:intergenic
CTAAGCCTAGAATAAGTTGA+AGG 0.488952 8.3:-22633134 None:intergenic
TTCTTCATAGTAACTCTTGG+TGG 0.498912 8.3:-22633271 None:intergenic
AGGTGTTAGATTTAACTCTC+TGG 0.498987 8.3:-22633661 None:intergenic
CACCTCGACAAGTTGAGGTC+TGG 0.514656 8.3:+22633679 MS.gene011683:CDS
AGGTTCTTCATAGTAACTCT+TGG 0.520099 8.3:-22633274 None:intergenic
GTGAAGGGATTGTAAAAGTG+AGG 0.521344 8.3:-22634418 None:intergenic
GGTTCCAGAACCGTAGAGCC+AGG 0.526669 8.3:+22633700 MS.gene011683:CDS
GTTGTTTCCTCTTTCTCTAG+TGG 0.529933 8.3:+22633336 MS.gene011683:CDS
TTTCCTCTTTCTCTAGTGGG+AGG 0.530703 8.3:+22633340 MS.gene011683:CDS
CCACCTAGTCTCTCACATGA+AGG 0.532667 8.3:-22634349 None:intergenic
GTAAGGGTAGCAGCAGGCAT+AGG 0.543191 8.3:-22634319 None:intergenic
TTTGTAACGTTGTTGTTGGA+TGG 0.545023 8.3:-22633186 None:intergenic
GATAAACCCAACGTTAAAGA+TGG 0.545369 8.3:-22633249 None:intergenic
AGAGAATAGGAGGCTACAAA+AGG 0.550932 8.3:+22634249 MS.gene011683:CDS
AGAAATGGAAACGACGGAGA+TGG 0.553541 8.3:+22633395 MS.gene011683:CDS
AGCAGGCATAGGCATATACA+AGG 0.565140 8.3:-22634308 None:intergenic
CACATAGTAAGGGTAGCAGC+AGG 0.565288 8.3:-22634325 None:intergenic
TGTATAGGTACCTGGCTCTA+CGG 0.565795 8.3:-22633710 None:intergenic
AAAGCTGAAGCAAACAGAAG+TGG 0.566126 8.3:+22634186 MS.gene011683:CDS
TGTGAGAGACTAGGTGGTGG+TGG 0.571619 8.3:+22634355 MS.gene011683:CDS
TCTAACACCTCGACAAGTTG+AGG 0.578186 8.3:+22633674 MS.gene011683:CDS
CATTAACAGAAGAGAATAGG+AGG 0.587793 8.3:+22634239 MS.gene011683:CDS
ATAGTTGTTATGATTACTTG+AGG 0.592747 8.3:-22633217 None:intergenic
AAGACGGTGCCACTGCAGCT+AGG 0.595899 8.3:+22633451 MS.gene011683:CDS
AAGCTTCTTCCTAGCTGCAG+TGG 0.601402 8.3:-22633460 None:intergenic
CAAGATGCTAGTAACAACTC+AGG 0.601537 8.3:+22633111 MS.gene011683:CDS
GTAACGTTGTTGTTGGATGG+TGG 0.602624 8.3:-22633183 None:intergenic
GAATAGGAGGCTACAAAAGG+AGG 0.603538 8.3:+22634252 MS.gene011683:CDS
GGTGGTGGTGGTGTTAATGG+TGG 0.605462 8.3:+22634367 MS.gene011683:CDS
TGCTGCTGAAGAATTTGTGA+AGG 0.611202 8.3:-22634434 None:intergenic
CACCTAGTCTCTCACATGAA+GGG 0.617037 8.3:-22634348 None:intergenic
ACATGAAGGGCACATAGTAA+GGG 0.623367 8.3:-22634335 None:intergenic
AACCAGACCTCAACTTGTCG+AGG 0.626268 8.3:-22633681 None:intergenic
GAGGAAACAACGCTGTGATG+AGG 0.631204 8.3:-22633324 None:intergenic
TGAATTAGAAATGGAAACGA+CGG 0.634393 8.3:+22633389 MS.gene011683:CDS
CCTTCATGTGAGAGACTAGG+TGG 0.665742 8.3:+22634349 MS.gene011683:CDS
TCATGTGAGAGACTAGGTGG+TGG 0.669612 8.3:+22634352 MS.gene011683:CDS
GCTGCTGAAGAATTTGTGAA+GGG 0.673398 8.3:-22634433 None:intergenic
ATCAGCGACGAAGATGAAGA+CGG 0.679700 8.3:+22633435 MS.gene011683:CDS
TGCCCTTCATGTGAGAGACT+AGG 0.694086 8.3:+22634346 MS.gene011683:CDS
GCAGGCATAGGCATATACAA+GGG 0.751200 8.3:-22634307 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTAATATTAAGATTATTTT+TGG + chr8.3:22634139-22634158 MS.gene011683:intron 10.0%
!! AATTAAATTAAACTCAACTA+TGG + chr8.3:22633764-22633783 MS.gene011683:intron 15.0%
!! ATATATATATGATATTTACG+TGG - chr8.3:22633971-22633990 None:intergenic 15.0%
!! ATTATCTTCAAATTAATTCA+GGG + chr8.3:22633943-22633962 MS.gene011683:intron 15.0%
!! ATTTACAATAGTATATGTAT+AGG - chr8.3:22633996-22634015 None:intergenic 15.0%
!! ATTTGAAGATAATATTTCAT+TGG - chr8.3:22633936-22633955 None:intergenic 15.0%
!! TATACATATACTATTGTAAA+TGG + chr8.3:22633995-22634014 MS.gene011683:intron 15.0%
!! TATTATCTTCAAATTAATTC+AGG + chr8.3:22633942-22633961 MS.gene011683:intron 15.0%
!!! TATTAAGATTATTTTTGGTT+TGG + chr8.3:22634144-22634163 MS.gene011683:intron 15.0%
!!! TATTTATCAAATTTTTGTGA+TGG + chr8.3:22633611-22633630 MS.gene011683:intron 15.0%
!! GTGTAGACAAAAAAAATTAT+GGG + chr8.3:22634092-22634111 MS.gene011683:intron 20.0%
!! TGTGTAGACAAAAAAAATTA+TGG + chr8.3:22634091-22634110 MS.gene011683:intron 20.0%
!! TTATGCATATATGTATGTAT+AGG - chr8.3:22633728-22633747 None:intergenic 20.0%
!!! ATTATTTTTGGTTTGGATTT+TGG + chr8.3:22634151-22634170 MS.gene011683:intron 20.0%
!!! TTATTTTTGGTTTGGATTTT+GGG + chr8.3:22634152-22634171 MS.gene011683:intron 20.0%
!!! TTTTCAATTGAAGTTATTCT+GGG - chr8.3:22634025-22634044 None:intergenic 20.0%
!!! TTTTTCAATTGAAGTTATTC+TGG - chr8.3:22634026-22634045 None:intergenic 20.0%
! AAACATTAACAGAAGAGAAT+AGG + chr8.3:22634236-22634255 MS.gene011683:CDS 25.0%
! ATAGTTGTTATGATTACTTG+AGG - chr8.3:22633220-22633239 None:intergenic 25.0%
! ATGTTTCACAACATTTCTTT+AGG - chr8.3:22634222-22634241 None:intergenic 25.0%
! CATATACTATTGTAAATGGA+TGG + chr8.3:22633999-22634018 MS.gene011683:intron 25.0%
! CCAATATGAAGATTATGTAA+TGG - chr8.3:22633812-22633831 None:intergenic 25.0%
! CCATTACATAATCTTCATAT+TGG + chr8.3:22633809-22633828 MS.gene011683:intron 25.0%
! GAGATTATGATTATGATTAC+AGG - chr8.3:22633549-22633568 None:intergenic 25.0%
! TTATGATTACTTGAGGAATA+AGG - chr8.3:22633213-22633232 None:intergenic 25.0%
!!! TCAACTATGGTTTTAAATTG+CGG + chr8.3:22633777-22633796 MS.gene011683:intron 25.0%
CTTAGAGAAATTGCTCTTAT+TGG - chr8.3:22634398-22634417 None:intergenic 30.0%
GTTTGTGTAGAAAAATCAAG+AGG - chr8.3:22633297-22633316 None:intergenic 30.0%
TATATGTATGTATAGGTACC+TGG - chr8.3:22633721-22633740 None:intergenic 30.0%
TGAATTAGAAATGGAAACGA+CGG + chr8.3:22633389-22633408 MS.gene011683:CDS 30.0%
TGTTAGCAGTGAATTAGAAA+TGG + chr8.3:22633380-22633399 MS.gene011683:CDS 30.0%
!!! TGCGAATATAACTGTTTTTG+AGG - chr8.3:22633881-22633900 None:intergenic 30.0%
AAGCATAGCAGATTGATCTT+TGG - chr8.3:22633493-22633512 None:intergenic 35.0%
AGGTGTTAGATTTAACTCTC+TGG - chr8.3:22633664-22633683 None:intergenic 35.0%
AGGTTCTTCATAGTAACTCT+TGG - chr8.3:22633277-22633296 None:intergenic 35.0%
CATTAACAGAAGAGAATAGG+AGG + chr8.3:22634239-22634258 MS.gene011683:CDS 35.0%
GATAAACCCAACGTTAAAGA+TGG - chr8.3:22633252-22633271 None:intergenic 35.0%
TTCTTCATAGTAACTCTTGG+TGG - chr8.3:22633274-22633293 None:intergenic 35.0%
TTGTTTCCTCTTTCTCTAGT+GGG + chr8.3:22633337-22633356 MS.gene011683:CDS 35.0%
! AAAGGAGGTGCAAGAATTAA+AGG + chr8.3:22634267-22634286 MS.gene011683:CDS 35.0%
! CTAAGCCTAGAATAAGTTGA+AGG - chr8.3:22633137-22633156 None:intergenic 35.0%
! TTTGTAACGTTGTTGTTGGA+TGG - chr8.3:22633189-22633208 None:intergenic 35.0%
AAAGCTGAAGCAAACAGAAG+TGG + chr8.3:22634186-22634205 MS.gene011683:CDS 40.0%
AGAGAATAGGAGGCTACAAA+AGG + chr8.3:22634249-22634268 MS.gene011683:CDS 40.0%
AGCTGAACCATCTTTAACGT+TGG + chr8.3:22633242-22633261 MS.gene011683:CDS 40.0%
CAAGATGCTAGTAACAACTC+AGG + chr8.3:22633111-22633130 MS.gene011683:CDS 40.0%
GCTGAACCATCTTTAACGTT+GGG + chr8.3:22633243-22633262 MS.gene011683:CDS 40.0%
GCTGCTGAAGAATTTGTGAA+GGG - chr8.3:22634436-22634455 None:intergenic 40.0%
GTACTTAAATTGCAGTACGC+AGG - chr8.3:22633908-22633927 None:intergenic 40.0%
GTGAAGGGATTGTAAAAGTG+AGG - chr8.3:22634421-22634440 None:intergenic 40.0%
TCAGGCCTTCAACTTATTCT+AGG + chr8.3:22633129-22633148 MS.gene011683:CDS 40.0%
TGCTGCTGAAGAATTTGTGA+AGG - chr8.3:22634437-22634456 None:intergenic 40.0%
! ACATGAAGGGCACATAGTAA+GGG - chr8.3:22634338-22634357 None:intergenic 40.0%
! AGGCTTTGTAACGTTGTTGT+TGG - chr8.3:22633193-22633212 None:intergenic 40.0%
! GTTGTTTCCTCTTTCTCTAG+TGG + chr8.3:22633336-22633355 MS.gene011683:CDS 40.0%
AGAAATGGAAACGACGGAGA+TGG + chr8.3:22633395-22633414 MS.gene011683:CDS 45.0%
AGCAGGCATAGGCATATACA+AGG - chr8.3:22634311-22634330 None:intergenic 45.0%
ATCAGCGACGAAGATGAAGA+CGG + chr8.3:22633435-22633454 MS.gene011683:CDS 45.0%
CACCTAGTCTCTCACATGAA+GGG - chr8.3:22634351-22634370 None:intergenic 45.0%
GAATAGGAGGCTACAAAAGG+AGG + chr8.3:22634252-22634271 MS.gene011683:CDS 45.0%
GCAGGCATAGGCATATACAA+GGG - chr8.3:22634310-22634329 None:intergenic 45.0%
TCTAACACCTCGACAAGTTG+AGG + chr8.3:22633674-22633693 MS.gene011683:CDS 45.0%
TTCCTCTTTCTCTAGTGGGA+GGG + chr8.3:22633341-22633360 MS.gene011683:CDS 45.0%
TTTCCTCTTTCTCTAGTGGG+AGG + chr8.3:22633340-22633359 MS.gene011683:CDS 45.0%
! CACATGAAGGGCACATAGTA+AGG - chr8.3:22634339-22634358 None:intergenic 45.0%
! GTAACGTTGTTGTTGGATGG+TGG - chr8.3:22633186-22633205 None:intergenic 45.0%
!! TGTATAGGTACCTGGCTCTA+CGG - chr8.3:22633713-22633732 None:intergenic 45.0%
AACCAGACCTCAACTTGTCG+AGG - chr8.3:22633684-22633703 None:intergenic 50.0%
AAGCTTCTTCCTAGCTGCAG+TGG - chr8.3:22633463-22633482 None:intergenic 50.0%
CACATAGTAAGGGTAGCAGC+AGG - chr8.3:22634328-22634347 None:intergenic 50.0%
CCACCTAGTCTCTCACATGA+AGG - chr8.3:22634352-22634371 None:intergenic 50.0%
CCTTCATGTGAGAGACTAGG+TGG + chr8.3:22634349-22634368 MS.gene011683:CDS 50.0%
GAGGAAACAACGCTGTGATG+AGG - chr8.3:22633327-22633346 None:intergenic 50.0%
TCATGTGAGAGACTAGGTGG+TGG + chr8.3:22634352-22634371 MS.gene011683:CDS 50.0%
TGCCCTTCATGTGAGAGACT+AGG + chr8.3:22634346-22634365 MS.gene011683:CDS 50.0%
! GGATGGTGGTGTGTCTTGTT+TGG - chr8.3:22633172-22633191 None:intergenic 50.0%
!! CTAGGTGGTGGTGGTGTTAA+TGG + chr8.3:22634364-22634383 MS.gene011683:CDS 50.0%
CACCCTCCCACTAGAGAAAG+AGG - chr8.3:22633346-22633365 None:intergenic 55.0%
GTAAGGGTAGCAGCAGGCAT+AGG - chr8.3:22634322-22634341 None:intergenic 55.0%
! CACCTCGACAAGTTGAGGTC+TGG + chr8.3:22633679-22633698 MS.gene011683:CDS 55.0%
! TGTGAGAGACTAGGTGGTGG+TGG + chr8.3:22634355-22634374 MS.gene011683:CDS 55.0%
!! GGTGGTGGTGGTGTTAATGG+TGG + chr8.3:22634367-22634386 MS.gene011683:CDS 55.0%
GGTTCCAGAACCGTAGAGCC+AGG + chr8.3:22633700-22633719 MS.gene011683:CDS 60.0%
!! AAGACGGTGCCACTGCAGCT+AGG + chr8.3:22633451-22633470 MS.gene011683:CDS 60.0%
!! GGTACCTGGCTCTACGGTTC+TGG - chr8.3:22633707-22633726 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 22633096 22634462 22633096 ID=MS.gene011683
chr8.3 mRNA 22633096 22634462 22633096 ID=MS.gene011683.t1;Parent=MS.gene011683
chr8.3 exon 22633096 22633548 22633096 ID=MS.gene011683.t1.exon1;Parent=MS.gene011683.t1
chr8.3 CDS 22633096 22633548 22633096 ID=cds.MS.gene011683.t1;Parent=MS.gene011683.t1
chr8.3 exon 22633642 22633721 22633642 ID=MS.gene011683.t1.exon2;Parent=MS.gene011683.t1
chr8.3 CDS 22633642 22633721 22633642 ID=cds.MS.gene011683.t1;Parent=MS.gene011683.t1
chr8.3 exon 22634183 22634462 22634183 ID=MS.gene011683.t1.exon3;Parent=MS.gene011683.t1
chr8.3 CDS 22634183 22634462 22634183 ID=cds.MS.gene011683.t1;Parent=MS.gene011683.t1
Gene Sequence

>MS.gene011683

ATGGGTCTTAATAATCAAGATGCTAGTAACAACTCAGGCCTTCAACTTATTCTAGGCTTAGCTCTTACTCTTACCAAACAAGACACACCACCATCCAACAACAACGTTACAAAGCCTTATTCCTCAAGTAATCATAACAACTATGAAGCTGAACCATCTTTAACGTTGGGTTTATCCACCAAGAGTTACTATGAAGAACCTCTTGATTTTTCTACACAAACAAACTCACCTCATCACAGCGTTGTTTCCTCTTTCTCTAGTGGGAGGGTGAAGAGAGAAAGAGATGTTAGCAGTGAATTAGAAATGGAAACGACGGAGATGGAGAGAGTTTCTTCGAGAATCAGCGACGAAGATGAAGACGGTGCCACTGCAGCTAGGAAGAAGCTTAGACTTACCAAAGATCAATCTGCTATGCTTGAAGAAAGTTTCAAAGAACACAGCACTCTCAATCCTGTAATCATAATCATAATCTCTTTCTATAGTTACATATCTTATTATTTTCATTTTTTCTCATTTATTTATCAAATTTTTGTGATGGATTTACAGAAACAGAAGCAAGCTTTAGCCAGAGAGTTAAATCTAACACCTCGACAAGTTGAGGTCTGGTTCCAGAACCGTAGAGCCAGGTACCTATACATACATATATGCATAATATATTTAATTTATTAAATTAAATTAAACTCAACTATGGTTTTAAATTGCGGTTGCAGTTACCATTACATAATCTTCATATTGGTAGAAACTGCAACGACTGCACTGTAATTGTGATGTCGTTGCAGAAACCTCAAAAACAGTTATATTCGCAATTGCCTGCGTACTGCAATTTAAGTACTACAGCCAATGAAATATTATCTTCAAATTAATTCAGGGTACCACGTAAATATCATATATATATCACCTATACATATACTATTGTAAATGGATGGCCCAGAATAACTTCAATTGAAAAAAAAAATTTAATCATTATTCATGTATTTACGTACACATATTATAAATGTGTAGACAAAAAAAATTATGGGTTTGATAAATATATATTAAATATATGTAATATTAAGATTATTTTTGGTTTGGATTTTGGGTGTAACAGAACAAAGCTGAAGCAAACAGAAGTGGATTGTGAGTTCCTAAAGAAATGTTGTGAAACATTAACAGAAGAGAATAGGAGGCTACAAAAGGAGGTGCAAGAATTAAAGGCACTAAAACTAGCACAACCCTTGTATATGCCTATGCCTGCTGCTACCCTTACTATGTGCCCTTCATGTGAGAGACTAGGTGGTGGTGGTGTTAATGGTGGTTCTTCCAATAAGAGCAATTTCTCTAAGCCTCACTTTTACAATCCCTTCACAAATTCTTCAGCAGCATGTTGA
Protein sequence

>MS.gene011683.t1

MGLNNQDASNNSGLQLILGLALTLTKQDTPPSNNNVTKPYSSSNHNNYEAEPSLTLGLSTKSYYEEPLDFSTQTNSPHHSVVSSFSSGRVKRERDVSSELEMETTEMERVSSRISDEDEDGATAARKKLRLTKDQSAMLEESFKEHSTLNPKQKQALARELNLTPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRRLQKEVQELKALKLAQPLYMPMPAATLTMCPSCERLGGGGVNGGSSNKSNFSKPHFYNPFTNSSAAC