Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011821.t1 | RHN42270.1 | 80.6 | 279 | 31 | 3 | 1 | 279 | 1 | 256 | 1.90E-117 | 432.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011821.t1 | P22335 | 44.3 | 298 | 109 | 8 | 1 | 264 | 1 | 275 | 2.1e-48 | 194.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011821.t1 | A0A396GMK4 | 80.6 | 279 | 31 | 3 | 1 | 279 | 1 | 256 | 1.3e-117 | 432.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene011821.t1 | TF | HSF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011821.t1 | MTR_5g017470 | 45.645 | 287 | 106 | 7 | 1 | 268 | 1 | 256 | 2.38e-70 | 219 |
| MS.gene011821.t1 | MTR_3g101870 | 36.704 | 267 | 114 | 6 | 2 | 216 | 17 | 280 | 2.44e-48 | 164 |
| MS.gene011821.t1 | MTR_7g091370 | 48.795 | 166 | 79 | 1 | 3 | 168 | 16 | 175 | 2.76e-47 | 158 |
| MS.gene011821.t1 | MTR_5g010680 | 43.719 | 199 | 83 | 3 | 2 | 171 | 17 | 215 | 3.66e-47 | 161 |
| MS.gene011821.t1 | MTR_5g089170 | 42.857 | 182 | 100 | 2 | 2 | 179 | 18 | 199 | 7.09e-45 | 152 |
| MS.gene011821.t1 | MTR_1g100777 | 43.000 | 200 | 98 | 3 | 2 | 185 | 11 | 210 | 3.34e-42 | 147 |
| MS.gene011821.t1 | MTR_0020s0020 | 40.500 | 200 | 89 | 1 | 2 | 171 | 26 | 225 | 2.14e-41 | 145 |
| MS.gene011821.t1 | MTR_5g029680 | 41.176 | 187 | 102 | 1 | 6 | 192 | 29 | 207 | 5.02e-41 | 148 |
| MS.gene011821.t1 | MTR_4g077970 | 41.667 | 192 | 97 | 4 | 9 | 197 | 12 | 191 | 7.39e-41 | 147 |
| MS.gene011821.t1 | MTR_1g061170 | 37.766 | 188 | 98 | 4 | 6 | 192 | 46 | 215 | 3.14e-37 | 137 |
| MS.gene011821.t1 | MTR_7g095680 | 61.458 | 96 | 37 | 0 | 5 | 100 | 45 | 140 | 9.31e-37 | 134 |
| MS.gene011821.t1 | MTR_6g043060 | 60.215 | 93 | 37 | 0 | 8 | 100 | 21 | 113 | 1.31e-36 | 133 |
| MS.gene011821.t1 | MTR_1g102860 | 38.172 | 186 | 99 | 3 | 7 | 192 | 38 | 207 | 6.34e-36 | 131 |
| MS.gene011821.t1 | MTR_1g071360 | 55.963 | 109 | 47 | 1 | 5 | 112 | 28 | 136 | 5.71e-35 | 129 |
| MS.gene011821.t1 | MTR_3g104550 | 37.879 | 198 | 98 | 5 | 5 | 197 | 42 | 219 | 7.49e-35 | 129 |
| MS.gene011821.t1 | MTR_6g086805 | 56.000 | 100 | 44 | 0 | 1 | 100 | 3 | 102 | 8.92e-35 | 128 |
| MS.gene011821.t1 | MTR_1g071360 | 55.963 | 109 | 47 | 1 | 5 | 112 | 25 | 133 | 9.40e-35 | 129 |
| MS.gene011821.t1 | MTR_8g105780 | 58.416 | 101 | 41 | 1 | 7 | 106 | 20 | 120 | 1.34e-34 | 128 |
| MS.gene011821.t1 | MTR_8g087540 | 42.282 | 149 | 69 | 2 | 9 | 156 | 12 | 144 | 1.87e-34 | 129 |
| MS.gene011821.t1 | MTR_2g017890 | 39.884 | 173 | 87 | 3 | 7 | 175 | 13 | 172 | 1.37e-33 | 126 |
| MS.gene011821.t1 | MTR_8g083100 | 58.242 | 91 | 38 | 0 | 10 | 100 | 23 | 113 | 4.60e-32 | 123 |
| MS.gene011821.t1 | MTR_4g088900 | 39.375 | 160 | 89 | 2 | 6 | 161 | 30 | 185 | 5.23e-32 | 117 |
| MS.gene011821.t1 | MTR_2g100680 | 55.914 | 93 | 41 | 0 | 8 | 100 | 30 | 122 | 3.20e-31 | 120 |
| MS.gene011821.t1 | MTR_2g100670 | 53.191 | 94 | 44 | 0 | 7 | 100 | 31 | 124 | 3.43e-29 | 113 |
| MS.gene011821.t1 | MTR_2g100670 | 53.191 | 94 | 44 | 0 | 7 | 100 | 139 | 232 | 1.41e-28 | 113 |
| MS.gene011821.t1 | MTR_2g085115 | 63.218 | 87 | 27 | 2 | 76 | 158 | 47 | 132 | 1.58e-25 | 99.0 |
| MS.gene011821.t1 | MTR_4g045757 | 59.016 | 61 | 24 | 1 | 9 | 68 | 14 | 74 | 3.85e-20 | 82.8 |
| MS.gene011821.t1 | MTR_5g047190 | 41.304 | 92 | 47 | 3 | 17 | 101 | 1 | 92 | 5.27e-18 | 77.8 |
| MS.gene011821.t1 | MTR_3g091000 | 43.902 | 82 | 26 | 1 | 132 | 213 | 23 | 84 | 2.58e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011821.t1 | AT4G36990 | 43.411 | 258 | 119 | 5 | 2 | 247 | 7 | 249 | 3.50e-56 | 182 |
| MS.gene011821.t1 | AT1G46264 | 35.836 | 293 | 132 | 7 | 6 | 247 | 31 | 318 | 9.90e-46 | 157 |
| MS.gene011821.t1 | AT2G41690 | 45.810 | 179 | 85 | 3 | 6 | 172 | 37 | 215 | 1.90e-43 | 148 |
| MS.gene011821.t1 | AT4G11660 | 41.500 | 200 | 77 | 2 | 2 | 161 | 52 | 251 | 1.92e-42 | 149 |
| MS.gene011821.t1 | AT3G02990 | 42.105 | 190 | 93 | 4 | 6 | 192 | 20 | 195 | 1.22e-41 | 149 |
| MS.gene011821.t1 | AT1G32330 | 43.316 | 187 | 100 | 3 | 6 | 192 | 34 | 214 | 8.36e-41 | 147 |
| MS.gene011821.t1 | AT1G32330 | 43.316 | 187 | 100 | 3 | 6 | 192 | 34 | 214 | 9.59e-41 | 147 |
| MS.gene011821.t1 | AT5G62020 | 40.625 | 192 | 92 | 4 | 2 | 171 | 16 | 207 | 2.16e-40 | 142 |
| MS.gene011821.t1 | AT5G16820 | 41.327 | 196 | 87 | 5 | 6 | 192 | 24 | 200 | 3.32e-40 | 145 |
| MS.gene011821.t1 | AT5G16820 | 41.327 | 196 | 87 | 5 | 6 | 192 | 24 | 200 | 3.32e-40 | 145 |
| MS.gene011821.t1 | AT4G17750 | 36.404 | 228 | 135 | 3 | 7 | 230 | 50 | 271 | 4.13e-38 | 140 |
| MS.gene011821.t1 | AT3G51910 | 52.101 | 119 | 48 | 1 | 6 | 124 | 26 | 135 | 3.83e-37 | 133 |
| MS.gene011821.t1 | AT3G24520 | 42.169 | 166 | 75 | 4 | 8 | 171 | 16 | 162 | 6.31e-37 | 134 |
| MS.gene011821.t1 | AT2G26150 | 38.624 | 189 | 101 | 1 | 9 | 197 | 44 | 217 | 1.05e-36 | 133 |
| MS.gene011821.t1 | AT2G26150 | 38.624 | 189 | 101 | 1 | 9 | 197 | 44 | 217 | 1.05e-36 | 133 |
| MS.gene011821.t1 | AT3G22830 | 59.375 | 96 | 39 | 0 | 6 | 101 | 58 | 153 | 5.36e-35 | 130 |
| MS.gene011821.t1 | AT5G43840 | 38.122 | 181 | 95 | 2 | 3 | 183 | 13 | 176 | 2.10e-34 | 126 |
| MS.gene011821.t1 | AT3G63350 | 36.898 | 187 | 99 | 1 | 7 | 193 | 26 | 193 | 3.45e-34 | 125 |
| MS.gene011821.t1 | AT5G03720 | 60.638 | 94 | 37 | 0 | 8 | 101 | 54 | 147 | 5.51e-34 | 127 |
| MS.gene011821.t1 | AT5G03720 | 60.638 | 94 | 37 | 0 | 8 | 101 | 54 | 147 | 5.51e-34 | 127 |
| MS.gene011821.t1 | AT4G13980 | 41.718 | 163 | 74 | 2 | 10 | 172 | 24 | 165 | 9.64e-34 | 128 |
| MS.gene011821.t1 | AT1G67970 | 43.125 | 160 | 75 | 3 | 7 | 165 | 17 | 161 | 9.65e-33 | 124 |
| MS.gene011821.t1 | AT5G54070 | 55.435 | 92 | 41 | 0 | 8 | 99 | 70 | 161 | 2.24e-32 | 122 |
| MS.gene011821.t1 | AT5G45710 | 43.137 | 153 | 70 | 2 | 6 | 157 | 10 | 146 | 5.19e-31 | 118 |
| MS.gene011821.t1 | AT5G45710 | 43.137 | 153 | 70 | 2 | 6 | 157 | 10 | 146 | 5.19e-31 | 118 |
| MS.gene011821.t1 | AT4G18880 | 35.922 | 206 | 103 | 4 | 6 | 209 | 12 | 190 | 1.73e-29 | 115 |
| MS.gene011821.t1 | AT4G18870 | 39.560 | 91 | 55 | 0 | 6 | 96 | 143 | 233 | 4.75e-18 | 82.4 |
| MS.gene011821.t1 | AT4G18870 | 37.363 | 91 | 56 | 1 | 6 | 96 | 10 | 99 | 2.19e-14 | 72.0 |
| MS.gene011821.t1 | AT1G77570 | 37.931 | 87 | 51 | 2 | 10 | 93 | 27 | 113 | 7.55e-12 | 62.4 |
Find 85 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGGTGCTGCTGAAGATA+TGG | 0.236484 | 8.1:+27169010 | MS.gene011821:CDS |
| TTGTTGTGCTTGAAATATTT+TGG | 0.239756 | 8.1:-27165135 | None:intergenic |
| TCACAAATGATGTGATTTCT+TGG | 0.292322 | 8.1:+27165052 | MS.gene011821:CDS |
| CGAGAACAAAAGACTCAAAA+TGG | 0.305997 | 8.1:+27169076 | MS.gene011821:CDS |
| GTGATTTCTTGGGGTGAAAA+TGG | 0.307729 | 8.1:+27165063 | MS.gene011821:CDS |
| GTATGAGACTGTTTGGGGTT+TGG | 0.309426 | 8.1:+27169351 | MS.gene011821:CDS |
| ATTTGTCGGCAGCAGCTTTC+CGG | 0.311222 | 8.1:-27168863 | None:intergenic |
| CCCCTCTCTTAAAATTCTCT+TGG | 0.321950 | 8.1:-27168896 | None:intergenic |
| TTTCAATTTCTCAGGGGTTC+CGG | 0.336163 | 8.1:+27168844 | MS.gene011821:intron |
| CACAAATGATGTGATTTCTT+GGG | 0.344507 | 8.1:+27165053 | MS.gene011821:CDS |
| GAAAGGGTATGAGACTGTTT+GGG | 0.348768 | 8.1:+27169345 | MS.gene011821:CDS |
| TTCAGGGCGGTCTCAACATC+GGG | 0.365918 | 8.1:+27169228 | MS.gene011821:CDS |
| AGAATTGCTTGCTTATCTTC+AGG | 0.367247 | 8.1:+27169148 | MS.gene011821:CDS |
| AGAATTGCTTGCTTATCTTC+AGG | 0.372663 | 8.1:+27169211 | MS.gene011821:CDS |
| TCATTGTTGGCACCATCAAT+TGG | 0.373020 | 8.1:-27169452 | None:intergenic |
| GGAAAGGGTATGAGACTGTT+TGG | 0.378172 | 8.1:+27169344 | MS.gene011821:CDS |
| GGAAAGCTGCTGCCGACAAA+TGG | 0.392444 | 8.1:+27168865 | MS.gene011821:CDS |
| TCTCTTGTGGCAGCTACCCT+TGG | 0.404436 | 8.1:-27169417 | None:intergenic |
| GTCTTCCGACGCTTGATTGT+CGG | 0.414985 | 8.1:-27168933 | None:intergenic |
| TTCAGGGTGATCTCAACATC+GGG | 0.437971 | 8.1:+27169165 | MS.gene011821:CDS |
| GTCTGATCGGTCCACCGATC+CGG | 0.438684 | 8.1:-27169045 | None:intergenic |
| AGGATCATCAATCATCTCAT+AGG | 0.440358 | 8.1:-27165028 | None:intergenic |
| CCCGCTGCTGTAAGATCTGT+TGG | 0.442824 | 8.1:+27168963 | MS.gene011821:CDS |
| CCCTCTCTTAAAATTCTCTT+GGG | 0.443216 | 8.1:-27168895 | None:intergenic |
| GAATTGCTTGCTTATCTTCA+GGG | 0.443640 | 8.1:+27169149 | MS.gene011821:CDS |
| GAATTGCTTGCTTATCTTCA+GGG | 0.444946 | 8.1:+27169212 | MS.gene011821:CDS |
| ATCATCATCCGTATCATGGC+TGG | 0.456429 | 8.1:-27169294 | None:intergenic |
| AACAGCCTTGAACTCATTGT+TGG | 0.460694 | 8.1:-27169465 | None:intergenic |
| CATTGTTGGCACCATCAATT+GGG | 0.461669 | 8.1:-27169451 | None:intergenic |
| ATCAATCATCTCATAGGTCT+TGG | 0.469811 | 8.1:-27165022 | None:intergenic |
| GGGCGTGAAGACCCAATTGA+TGG | 0.486085 | 8.1:+27169440 | MS.gene011821:CDS |
| TCGTTCCTTTGCCAAGGATA+CGG | 0.487676 | 8.1:-27169265 | None:intergenic |
| GATGAAATTAACCGTATCCT+TGG | 0.490434 | 8.1:+27169254 | MS.gene011821:CDS |
| GAAAGCTGCTGCCGACAAAT+GGG | 0.492919 | 8.1:+27168866 | MS.gene011821:CDS |
| CATCATCATCATCCGTATCA+TGG | 0.496813 | 8.1:-27169298 | None:intergenic |
| TTGGGCGAATTCCCATTTGT+CGG | 0.497343 | 8.1:-27168877 | None:intergenic |
| TCTGGTGCTGCTGAAGATAT+GGG | 0.499437 | 8.1:+27169011 | MS.gene011821:CDS |
| CCAACAGATCTTACAGCAGC+GGG | 0.502479 | 8.1:-27168963 | None:intergenic |
| GTACGTCGTGAATGCGGAAA+GGG | 0.504721 | 8.1:+27169329 | MS.gene011821:CDS |
| GCTGTAAGATCTGTTGGAGT+TGG | 0.513039 | 8.1:+27168969 | MS.gene011821:CDS |
| GAAGAAAATGTCTAAGAGGT+TGG | 0.514254 | 8.1:+27164981 | None:intergenic |
| GTTTGGCTGAAGGAAGAAGA+GGG | 0.514660 | 8.1:+27169368 | MS.gene011821:CDS |
| TGAGTTCAAGGCTGTTGTCT+AGG | 0.515335 | 8.1:+27169472 | MS.gene011821:CDS |
| CTTCACGAGTGCCAGTTCAC+TGG | 0.517956 | 8.1:-27169114 | None:intergenic |
| TAAGATCTGTTGGAGTTGGC+GGG | 0.518928 | 8.1:+27168973 | MS.gene011821:CDS |
| GGGAATTCACCTTCGCACTC+TGG | 0.523578 | 8.1:+27168993 | MS.gene011821:CDS |
| ACCCATTCGTTCCTTTGCCA+AGG | 0.525178 | 8.1:-27169271 | None:intergenic |
| GGTCTTCACGCCCTCTCTTG+TGG | 0.525936 | 8.1:-27169430 | None:intergenic |
| GTAAGATCTGTTGGAGTTGG+CGG | 0.525989 | 8.1:+27168972 | MS.gene011821:CDS |
| ATCCTTGGCAAAGGAACGAA+TGG | 0.527436 | 8.1:+27169269 | MS.gene011821:CDS |
| CTTCAGGGCGGTCTCAACAT+CGG | 0.528747 | 8.1:+27169227 | MS.gene011821:CDS |
| AGGGTAGCTGCCACAAGAGA+GGG | 0.548965 | 8.1:+27169420 | MS.gene011821:CDS |
| AGAAGAGGGGAAAGACAAGG+TGG | 0.549839 | 8.1:+27169382 | MS.gene011821:CDS |
| GAATGGGTCCAGCCATGATA+CGG | 0.552219 | 8.1:+27169286 | MS.gene011821:CDS |
| GGGATCAACTTCGACCGGAT+CGG | 0.553641 | 8.1:+27169031 | MS.gene011821:CDS |
| GGAAGAAGAAAATGTCTAAG+AGG | 0.554539 | 8.1:+27164977 | None:intergenic |
| CTTGATTGTCGGAAGCAGCT+CGG | 0.555478 | 8.1:-27168922 | None:intergenic |
| TGGTGCCAACAATGAGTTCA+AGG | 0.555667 | 8.1:+27169460 | MS.gene011821:CDS |
| TCCAACAGATCTTACAGCAG+CGG | 0.556507 | 8.1:-27168964 | None:intergenic |
| AAGGGTAGCTGCCACAAGAG+AGG | 0.563776 | 8.1:+27169419 | MS.gene011821:CDS |
| GGTACGTCGTGAATGCGGAA+AGG | 0.565791 | 8.1:+27169328 | MS.gene011821:CDS |
| GATATGGGATCAACTTCGAC+CGG | 0.569648 | 8.1:+27169026 | MS.gene011821:CDS |
| ACTGTTTGGGGTTTGGCTGA+AGG | 0.570866 | 8.1:+27169358 | MS.gene011821:CDS |
| TCCTTGGCAAAGGAACGAAT+GGG | 0.573236 | 8.1:+27169270 | MS.gene011821:CDS |
| GGAAGAAGAGGGGAAAGACA+AGG | 0.573733 | 8.1:+27169379 | MS.gene011821:CDS |
| ATCAACTTCGACCGGATCGG+TGG | 0.586784 | 8.1:+27169034 | MS.gene011821:CDS |
| ATTAACCGTATCCTTGGCAA+AGG | 0.593236 | 8.1:+27169260 | MS.gene011821:CDS |
| CTTCAGGGTGATCTCAACAT+CGG | 0.601478 | 8.1:+27169164 | MS.gene011821:CDS |
| GGTTTGGCTGAAGGAAGAAG+AGG | 0.605675 | 8.1:+27169367 | MS.gene011821:CDS |
| TGCTTCCGACAATCAAGCGT+CGG | 0.618599 | 8.1:+27168928 | MS.gene011821:CDS |
| GAAATCACATCATTTGTGAG+AGG | 0.623568 | 8.1:-27165048 | None:intergenic |
| GGTGGAGATTGACACTGCCA+AGG | 0.626051 | 8.1:+27169400 | MS.gene011821:CDS |
| AAAGGGTATGAGACTGTTTG+GGG | 0.631660 | 8.1:+27169346 | MS.gene011821:CDS |
| AACAGATCTTACAGCAGCGG+GGG | 0.636718 | 8.1:-27168961 | None:intergenic |
| ACAAATGATGTGATTTCTTG+GGG | 0.640243 | 8.1:+27165054 | MS.gene011821:CDS |
| TCTCGATGGATAAGTCTGAT+CGG | 0.645977 | 8.1:-27169058 | None:intergenic |
| TCAGCAGCACCAGAGTGCGA+AGG | 0.648598 | 8.1:-27169002 | None:intergenic |
| AATGTGGTACGTCGTGAATG+CGG | 0.667673 | 8.1:+27169323 | MS.gene011821:CDS |
| TTTGGCTGAAGGAAGAAGAG+GGG | 0.668209 | 8.1:+27169369 | MS.gene011821:CDS |
| GTGGAGATTGACACTGCCAA+GGG | 0.681976 | 8.1:+27169401 | MS.gene011821:CDS |
| CAACAGATCTTACAGCAGCG+GGG | 0.700402 | 8.1:-27168962 | None:intergenic |
| TCAGGGCGGTCTCAACATCG+GGG | 0.720922 | 8.1:+27169229 | MS.gene011821:CDS |
| TTGCTTGCTTATCTTCAGGG+CGG | 0.721162 | 8.1:+27169215 | MS.gene011821:CDS |
| GGATGATGATGATGACAATG+TGG | 0.760143 | 8.1:+27169307 | MS.gene011821:CDS |
| TCAGGGTGATCTCAACATCG+GGG | 0.765373 | 8.1:+27169166 | MS.gene011821:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAACAAAACATT+TGG | - | chr8.1:27165924-27165943 | None:intergenic | 10.0% |
| !! | ATTCTAATTAAATTAATTGA+AGG | - | chr8.1:27167040-27167059 | None:intergenic | 10.0% |
| !! | ATTTAATAATTAAAATGCAT+CGG | + | chr8.1:27167364-27167383 | MS.gene011821:intron | 10.0% |
| !! | TTATTGTAAATATACATTAA+TGG | + | chr8.1:27166312-27166331 | MS.gene011821:intron | 10.0% |
| !!! | AATTATTTAACTTTATCATA+AGG | + | chr8.1:27168239-27168258 | MS.gene011821:intron | 10.0% |
| !!! | ATAAATTTTTTGTTTTTTGA+AGG | + | chr8.1:27166728-27166747 | MS.gene011821:intron | 10.0% |
| !!! | ATTATTTAACTTTATCATAA+GGG | + | chr8.1:27168240-27168259 | MS.gene011821:intron | 10.0% |
| !!! | TAATTTATATTTTTTTTGAC+TGG | + | chr8.1:27166593-27166612 | MS.gene011821:intron | 10.0% |
| !!! | TTATATTTTTTTTTTTTGAC+TGG | + | chr8.1:27166550-27166569 | MS.gene011821:intron | 10.0% |
| !! | AAAAATAAAGAATTATCTGT+TGG | + | chr8.1:27167452-27167471 | MS.gene011821:intron | 15.0% |
| !! | AAACTATTAAATCGATTAAA+GGG | + | chr8.1:27167327-27167346 | MS.gene011821:intron | 15.0% |
| !! | AGAAAAATAAAATATCGAAA+AGG | - | chr8.1:27166166-27166185 | None:intergenic | 15.0% |
| !! | ATTGAAGGTAAATTAAAAAA+CGG | - | chr8.1:27167025-27167044 | None:intergenic | 15.0% |
| !! | CAAAAAGAAAAGAAAAAAAA+AGG | - | chr8.1:27166076-27166095 | None:intergenic | 15.0% |
| !! | TAAACTATTAAATCGATTAA+AGG | + | chr8.1:27167326-27167345 | MS.gene011821:intron | 15.0% |
| !! | TTAAAAAAGTCAAATGTATT+TGG | - | chr8.1:27165465-27165484 | None:intergenic | 15.0% |
| !!! | ACTATAGTAATTATTTTTTG+TGG | - | chr8.1:27167213-27167232 | None:intergenic | 15.0% |
| !!! | ACTTTATTTAAAAAGACTAT+CGG | - | chr8.1:27168344-27168363 | None:intergenic | 15.0% |
| !!! | ATATACATTAATGGTTTTTA+TGG | + | chr8.1:27166321-27166340 | MS.gene011821:intron | 15.0% |
| !!! | ATTATCTGTTTTTTTTTTGA+AGG | + | chr8.1:27167429-27167448 | MS.gene011821:intron | 15.0% |
| !!! | TGTTTTTTCTACAATTTTAA+AGG | + | chr8.1:27167948-27167967 | MS.gene011821:intron | 15.0% |
| !!! | TTTATTCTCACAAATATTTT+TGG | + | chr8.1:27167823-27167842 | MS.gene011821:intron | 15.0% |
| !! | AACAATACACACAAAATATT+AGG | + | chr8.1:27168443-27168462 | MS.gene011821:intron | 20.0% |
| !! | AGACTTTATTACATATGAAT+TGG | + | chr8.1:27165699-27165718 | MS.gene011821:intron | 20.0% |
| !! | ATAATATCATATTGCATGTT+AGG | - | chr8.1:27168724-27168743 | None:intergenic | 20.0% |
| !! | GAAAATAAAACCATAAAAGA+TGG | - | chr8.1:27165209-27165228 | None:intergenic | 20.0% |
| !! | TAATATCATATTGCATGTTA+GGG | - | chr8.1:27168723-27168742 | None:intergenic | 20.0% |
| !! | TACACTATTGTAAATTTACA+TGG | + | chr8.1:27168180-27168199 | MS.gene011821:intron | 20.0% |
| !! | TATTATTATGATCCTTCAAT+TGG | - | chr8.1:27165773-27165792 | None:intergenic | 20.0% |
| !! | TTGAAGGATCATAATAATAT+TGG | + | chr8.1:27165774-27165793 | MS.gene011821:intron | 20.0% |
| !! | TTGAAGGTAAATTAAAAAAC+GGG | - | chr8.1:27167024-27167043 | None:intergenic | 20.0% |
| !!! | AAATATTTTTGAACAACTTC+CGG | - | chr8.1:27166656-27166675 | None:intergenic | 20.0% |
| !!! | AACAAGCTTTAATGAAATTT+AGG | - | chr8.1:27167732-27167751 | None:intergenic | 20.0% |
| !!! | ACTTACATCATGAAAATTTT+CGG | + | chr8.1:27167701-27167720 | MS.gene011821:intron | 20.0% |
| !!! | ATTTTTTTCTTCCAATTTAG+TGG | + | chr8.1:27168086-27168105 | MS.gene011821:intron | 20.0% |
| !!! | CTTCTACTTAATTTTAATTG+TGG | + | chr8.1:27166964-27166983 | MS.gene011821:intron | 20.0% |
| !!! | GTTTATTAGTTTATGCTTAA+TGG | + | chr8.1:27165650-27165669 | MS.gene011821:intron | 20.0% |
| !!! | TAAGAGTTTTGACTTAATAA+TGG | - | chr8.1:27165591-27165610 | None:intergenic | 20.0% |
| !!! | TATATCCTATTATCATTTTG+AGG | + | chr8.1:27168415-27168434 | MS.gene011821:intron | 20.0% |
| !!! | TGTTTTATTACTTTTATGTG+TGG | + | chr8.1:27166020-27166039 | MS.gene011821:intron | 20.0% |
| !!! | TTTATATTTTTTTTGACTGG+AGG | + | chr8.1:27166596-27166615 | MS.gene011821:intron | 20.0% |
| !!! | TTTGAAATGTTATATACACA+AGG | - | chr8.1:27167771-27167790 | None:intergenic | 20.0% |
| ! | AAATATTCACCAACTTTATG+CGG | - | chr8.1:27168321-27168340 | None:intergenic | 25.0% |
| ! | ACAATAAACATTTGACATGT+CGG | - | chr8.1:27165431-27165450 | None:intergenic | 25.0% |
| ! | ACCTATAATTAAAGTCGATT+TGG | - | chr8.1:27168620-27168639 | None:intergenic | 25.0% |
| ! | ATAAACTTGAGGATTAAGAA+AGG | + | chr8.1:27167588-27167607 | MS.gene011821:intron | 25.0% |
| ! | ATAATCACAGATAATGAGTT+GGG | + | chr8.1:27168391-27168410 | MS.gene011821:intron | 25.0% |
| ! | ATCTTGAATTTCAATTTCTC+AGG | + | chr8.1:27168836-27168855 | MS.gene011821:intron | 25.0% |
| ! | GGTGTGAATTATAAATTCAT+TGG | + | chr8.1:27168683-27168702 | MS.gene011821:intron | 25.0% |
| ! | TAAGGGTAGTTTACTTATTT+CGG | + | chr8.1:27168257-27168276 | MS.gene011821:intron | 25.0% |
| ! | TCTTGAATTTCAATTTCTCA+GGG | + | chr8.1:27168837-27168856 | MS.gene011821:intron | 25.0% |
| ! | TGAAGGTAAATTAAAAAACG+GGG | - | chr8.1:27167023-27167042 | None:intergenic | 25.0% |
| ! | TGGTAAATTTATTTGAGTGT+GGG | + | chr8.1:27165719-27165738 | MS.gene011821:intron | 25.0% |
| ! | TGTCATATAAAATGAGTTTG+CGG | - | chr8.1:27168039-27168058 | None:intergenic | 25.0% |
| ! | TGTTTGTAGTGTATCTAATT+TGG | + | chr8.1:27168125-27168144 | MS.gene011821:intron | 25.0% |
| ! | TTACAATAAAGTGTGCAAAA+AGG | + | chr8.1:27167656-27167675 | MS.gene011821:intron | 25.0% |
| ! | TTGGTAAATTTATTTGAGTG+TGG | + | chr8.1:27165718-27165737 | MS.gene011821:intron | 25.0% |
| !! | AAATCGACTTTAATTATAGG+TGG | + | chr8.1:27168619-27168638 | MS.gene011821:intron | 25.0% |
| !! | ACCAAATCGACTTTAATTAT+AGG | + | chr8.1:27168616-27168635 | MS.gene011821:intron | 25.0% |
| !! | CAACCAAAAATGGATTTATT+TGG | - | chr8.1:27166997-27167016 | None:intergenic | 25.0% |
| !! | TGAACTCATATTAGTATTGA+TGG | + | chr8.1:27165534-27165553 | MS.gene011821:intron | 25.0% |
| !! | TTGCCAAATAAATCCATTTT+TGG | + | chr8.1:27166991-27167010 | MS.gene011821:intron | 25.0% |
| !! | TTGTTGTGCTTGAAATATTT+TGG | - | chr8.1:27165138-27165157 | None:intergenic | 25.0% |
| !!! | CAAATAAATCCATTTTTGGT+TGG | + | chr8.1:27166995-27167014 | MS.gene011821:intron | 25.0% |
| !!! | CTAGTTTTAAAACCGATAAA+AGG | + | chr8.1:27165404-27165423 | MS.gene011821:intron | 25.0% |
| !!! | GAAACAAGTTGAATTTTCAA+GGG | + | chr8.1:27165104-27165123 | MS.gene011821:CDS | 25.0% |
| !!! | TGAAACAAGTTGAATTTTCA+AGG | + | chr8.1:27165103-27165122 | MS.gene011821:CDS | 25.0% |
| ACAAATGATGTGATTTCTTG+GGG | + | chr8.1:27165054-27165073 | MS.gene011821:CDS | 30.0% | |
| ACAATAATCTAGTCTACATG+CGG | - | chr8.1:27166299-27166318 | None:intergenic | 30.0% | |
| ACGTTGAATGAAAATTAGAG+TGG | + | chr8.1:27165802-27165821 | MS.gene011821:intron | 30.0% | |
| ATATACTTTAGTCCTTGGTA+TGG | + | chr8.1:27167111-27167130 | MS.gene011821:intron | 30.0% | |
| ATTTACGCAAACCACTAAAT+TGG | - | chr8.1:27168100-27168119 | None:intergenic | 30.0% | |
| CACAAATGATGTGATTTCTT+GGG | + | chr8.1:27165053-27165072 | MS.gene011821:CDS | 30.0% | |
| CATAATCACAGATAATGAGT+TGG | + | chr8.1:27168390-27168409 | MS.gene011821:intron | 30.0% | |
| CGTTGAATGAAAATTAGAGT+GGG | + | chr8.1:27165803-27165822 | MS.gene011821:intron | 30.0% | |
| CTTGAATTTCAATTTCTCAG+GGG | + | chr8.1:27168838-27168857 | MS.gene011821:intron | 30.0% | |
| GCATATAATAAGTAGCATTG+AGG | - | chr8.1:27168772-27168791 | None:intergenic | 30.0% | |
| GGTAAATTTATTTGAGTGTG+GGG | + | chr8.1:27165720-27165739 | MS.gene011821:intron | 30.0% | |
| TAGAAAAATCCGCATAAAGT+TGG | + | chr8.1:27168309-27168328 | MS.gene011821:intron | 30.0% | |
| TAGAGTGAGAGATAAAAACA+GGG | - | chr8.1:27167795-27167814 | None:intergenic | 30.0% | |
| TCACAAATGATGTGATTTCT+TGG | + | chr8.1:27165052-27165071 | MS.gene011821:CDS | 30.0% | |
| TCAGTATATACTTTAGTCCT+TGG | + | chr8.1:27167106-27167125 | MS.gene011821:intron | 30.0% | |
| TCGAAATTGTCTTGATCAAA+AGG | + | chr8.1:27167562-27167581 | MS.gene011821:intron | 30.0% | |
| TGAAAAATTAACCAGTGAAC+TGG | + | chr8.1:27169103-27169122 | MS.gene011821:CDS | 30.0% | |
| TTAGAGTGAGAGATAAAAAC+AGG | - | chr8.1:27167796-27167815 | None:intergenic | 30.0% | |
| TTGTCTTGTATTTGTACGAA+CGG | + | chr8.1:27166479-27166498 | MS.gene011821:intron | 30.0% | |
| ! | ACTTATTTCGGTGTGTAATT+AGG | + | chr8.1:27168269-27168288 | MS.gene011821:intron | 30.0% |
| ! | AGATAGTGCTATAGAACTTT+TGG | + | chr8.1:27166098-27166117 | MS.gene011821:intron | 30.0% |
| ! | GTGTGTAATTAGGTGTTTTT+CGG | + | chr8.1:27168279-27168298 | MS.gene011821:intron | 30.0% |
| ! | TGTGTAATTAGGTGTTTTTC+GGG | + | chr8.1:27168280-27168299 | MS.gene011821:intron | 30.0% |
| !! | ACAAAACATTTGGTGTGAAA+AGG | - | chr8.1:27165914-27165933 | None:intergenic | 30.0% |
| !! | ACTCATATTAGTATTGATGG+TGG | + | chr8.1:27165537-27165556 | MS.gene011821:intron | 30.0% |
| !! | ATCACATGATAACTAGTCTT+TGG | + | chr8.1:27168662-27168681 | MS.gene011821:intron | 30.0% |
| !! | TCAAAAGGTTGATAAACTTG+AGG | + | chr8.1:27167577-27167596 | MS.gene011821:intron | 30.0% |
| !!! | AGTTAGTTCTATCTTTTGAG+TGG | + | chr8.1:27166859-27166878 | MS.gene011821:intron | 30.0% |
| !!! | GTTAGTTCTATCTTTTGAGT+GGG | + | chr8.1:27166860-27166879 | MS.gene011821:intron | 30.0% |
| !!! | TCCTATTATCATTTTGAGGT+CGG | + | chr8.1:27168419-27168438 | MS.gene011821:intron | 30.0% |
| !!! | TTTTTTTAAGCAGACACATG+TGG | - | chr8.1:27165981-27166000 | None:intergenic | 30.0% |
| AATTTATTTGAGTGTGGGGT+AGG | + | chr8.1:27165724-27165743 | MS.gene011821:intron | 35.0% | |
| ACCGACCTCAAAATGATAAT+AGG | - | chr8.1:27168423-27168442 | None:intergenic | 35.0% | |
| AGAATTGCTTGCTTATCTTC+AGG | + | chr8.1:27169148-27169167 | MS.gene011821:CDS | 35.0% | |
| AGGATCATCAATCATCTCAT+AGG | - | chr8.1:27165031-27165050 | None:intergenic | 35.0% | |
| ATCAATCATCTCATAGGTCT+TGG | - | chr8.1:27165025-27165044 | None:intergenic | 35.0% | |
| ATGGAACAAGACACTTACAT+AGG | - | chr8.1:27165190-27165209 | None:intergenic | 35.0% | |
| ATTTATTTGAGTGTGGGGTA+GGG | + | chr8.1:27165725-27165744 | MS.gene011821:intron | 35.0% | |
| CACATTACGTAGGATAGAAT+TGG | + | chr8.1:27165829-27165848 | MS.gene011821:intron | 35.0% | |
| CCCTCTCTTAAAATTCTCTT+GGG | - | chr8.1:27168898-27168917 | None:intergenic | 35.0% | |
| CGAGAACAAAAGACTCAAAA+TGG | + | chr8.1:27169076-27169095 | MS.gene011821:CDS | 35.0% | |
| GAAATCACATCATTTGTGAG+AGG | - | chr8.1:27165051-27165070 | None:intergenic | 35.0% | |
| GAATTGCTTGCTTATCTTCA+GGG | + | chr8.1:27169149-27169168 | MS.gene011821:CDS | 35.0% | |
| GATGAAATTAACCGTATCCT+TGG | + | chr8.1:27169254-27169273 | MS.gene011821:CDS | 35.0% | |
| TCATAGGTCTTGGTCAAAAA+TGG | - | chr8.1:27165015-27165034 | None:intergenic | 35.0% | |
| TGTCTTGTATTTGTACGAAC+GGG | + | chr8.1:27166480-27166499 | MS.gene011821:intron | 35.0% | |
| TTGAGGATTAAGAAAGGATG+TGG | + | chr8.1:27167594-27167613 | MS.gene011821:intron | 35.0% | |
| ! | AAATGGCAACACTTTTGTTG+TGG | + | chr8.1:27165080-27165099 | MS.gene011821:CDS | 35.0% |
| ! | AGTGCTATAGAACTTTTGGT+AGG | + | chr8.1:27166102-27166121 | MS.gene011821:intron | 35.0% |
| ! | TTTGAGTCTTTTGTTCTCGA+TGG | - | chr8.1:27169075-27169094 | None:intergenic | 35.0% |
| !! | CCAAGAGAATTTTAAGAGAG+GGG | + | chr8.1:27168896-27168915 | MS.gene011821:CDS | 35.0% |
| !! | CCCAAGAGAATTTTAAGAGA+GGG | + | chr8.1:27168895-27168914 | MS.gene011821:CDS | 35.0% |
| !! | GTGTCTTGTTCCATCTTTTA+TGG | + | chr8.1:27165196-27165215 | MS.gene011821:intron | 35.0% |
| !!! | CGTAGTGTTTTGCTATTTCT+TGG | + | chr8.1:27165946-27165965 | MS.gene011821:intron | 35.0% |
| AACAGCCTTGAACTCATTGT+TGG | - | chr8.1:27169468-27169487 | None:intergenic | 40.0% | |
| AGCTAAGATCTTCCATACCA+AGG | - | chr8.1:27167126-27167145 | None:intergenic | 40.0% | |
| ATTAACCGTATCCTTGGCAA+AGG | + | chr8.1:27169260-27169279 | MS.gene011821:CDS | 40.0% | |
| CATCATCATCATCCGTATCA+TGG | - | chr8.1:27169301-27169320 | None:intergenic | 40.0% | |
| CATTGTTGGCACCATCAATT+GGG | - | chr8.1:27169454-27169473 | None:intergenic | 40.0% | |
| CCCCTCTCTTAAAATTCTCT+TGG | - | chr8.1:27168899-27168918 | None:intergenic | 40.0% | |
| GAAAGGATGTGGCTTTCTTA+AGG | + | chr8.1:27167605-27167624 | MS.gene011821:intron | 40.0% | |
| GTCTTGTATTTGTACGAACG+GGG | + | chr8.1:27166481-27166500 | MS.gene011821:intron | 40.0% | |
| GTGATTTCTTGGGGTGAAAA+TGG | + | chr8.1:27165063-27165082 | MS.gene011821:CDS | 40.0% | |
| TACGTGGAACTTCCAATTGA+AGG | + | chr8.1:27165758-27165777 | MS.gene011821:intron | 40.0% | |
| TCATTGTTGGCACCATCAAT+TGG | - | chr8.1:27169455-27169474 | None:intergenic | 40.0% | |
| TCTCGATGGATAAGTCTGAT+CGG | - | chr8.1:27169061-27169080 | None:intergenic | 40.0% | |
| TGAACAACTTCCGGATAAGT+TGG | - | chr8.1:27166647-27166666 | None:intergenic | 40.0% | |
| TTTATTTGAGTGTGGGGTAG+GGG | + | chr8.1:27165726-27165745 | MS.gene011821:intron | 40.0% | |
| TTTCAATTTCTCAGGGGTTC+CGG | + | chr8.1:27168844-27168863 | MS.gene011821:intron | 40.0% | |
| ! | AAAGGGTATGAGACTGTTTG+GGG | + | chr8.1:27169346-27169365 | MS.gene011821:CDS | 40.0% |
| ! | GAAAGGGTATGAGACTGTTT+GGG | + | chr8.1:27169345-27169364 | MS.gene011821:CDS | 40.0% |
| ! | GCTATAGAACTTTTGGTAGG+TGG | + | chr8.1:27166105-27166124 | MS.gene011821:intron | 40.0% |
| ! | GGATGATGATGATGACAATG+TGG | + | chr8.1:27169307-27169326 | MS.gene011821:CDS | 40.0% |
| ! | TAGAACTTTTGGTAGGTGGA+TGG | + | chr8.1:27166109-27166128 | MS.gene011821:intron | 40.0% |
| ! | TGACATGTCGGTCCTTTTAT+CGG | - | chr8.1:27165419-27165438 | None:intergenic | 40.0% |
| !! | GCCCAAGAGAATTTTAAGAG+AGG | + | chr8.1:27168894-27168913 | MS.gene011821:CDS | 40.0% |
| !! | GTATTGATGGTGGATCACTT+AGG | + | chr8.1:27165547-27165566 | MS.gene011821:intron | 40.0% |
| !!! | TTTTTTTTGACTGGAGGCAG+TGG | + | chr8.1:27166602-27166621 | MS.gene011821:intron | 40.0% |
| AACGGGGAACCAACCAAAAA+TGG | - | chr8.1:27167007-27167026 | None:intergenic | 45.0% | |
| AATGTGGTACGTCGTGAATG+CGG | + | chr8.1:27169323-27169342 | MS.gene011821:CDS | 45.0% | |
| ATCATCATCCGTATCATGGC+TGG | - | chr8.1:27169297-27169316 | None:intergenic | 45.0% | |
| ATCCTTGGCAAAGGAACGAA+TGG | + | chr8.1:27169269-27169288 | MS.gene011821:CDS | 45.0% | |
| CACCACTCTACCAACTTATC+CGG | + | chr8.1:27166634-27166653 | MS.gene011821:intron | 45.0% | |
| CTTCAGGGTGATCTCAACAT+CGG | + | chr8.1:27169164-27169183 | MS.gene011821:CDS | 45.0% | |
| GATATGGGATCAACTTCGAC+CGG | + | chr8.1:27169026-27169045 | MS.gene011821:CDS | 45.0% | |
| GTTTGGCTGAAGGAAGAAGA+GGG | + | chr8.1:27169368-27169387 | MS.gene011821:CDS | 45.0% | |
| TCCAACAGATCTTACAGCAG+CGG | - | chr8.1:27168967-27168986 | None:intergenic | 45.0% | |
| TCCTTGGCAAAGGAACGAAT+GGG | + | chr8.1:27169270-27169289 | MS.gene011821:CDS | 45.0% | |
| TCGTTCCTTTGCCAAGGATA+CGG | - | chr8.1:27169268-27169287 | None:intergenic | 45.0% | |
| TGTATTTGTACGAACGGGGT+TGG | + | chr8.1:27166485-27166504 | MS.gene011821:intron | 45.0% | |
| TTCAGGGTGATCTCAACATC+GGG | + | chr8.1:27169165-27169184 | MS.gene011821:CDS | 45.0% | |
| TTGCTTGCTTATCTTCAGGG+CGG | + | chr8.1:27169152-27169171 | MS.gene011821:CDS | 45.0% | |
| TTGGGCGAATTCCCATTTGT+CGG | - | chr8.1:27168880-27168899 | None:intergenic | 45.0% | |
| TTTGGCTGAAGGAAGAAGAG+GGG | + | chr8.1:27169369-27169388 | MS.gene011821:CDS | 45.0% | |
| ! | GAGTGGGTTTCACATTACGT+AGG | + | chr8.1:27165819-27165838 | MS.gene011821:intron | 45.0% |
| ! | GGAAAGGGTATGAGACTGTT+TGG | + | chr8.1:27169344-27169363 | MS.gene011821:CDS | 45.0% |
| ! | GTAGGGGCTAGAATTTTACG+TGG | + | chr8.1:27165742-27165761 | MS.gene011821:intron | 45.0% |
| ! | GTATGAGACTGTTTGGGGTT+TGG | + | chr8.1:27169351-27169370 | MS.gene011821:CDS | 45.0% |
| ! | TGGTGCCAACAATGAGTTCA+AGG | + | chr8.1:27169460-27169479 | MS.gene011821:CDS | 45.0% |
| !! | ATGGTGGATCACTTAGGAAC+GGG | + | chr8.1:27165553-27165572 | MS.gene011821:intron | 45.0% |
| !! | GATGGTGGATCACTTAGGAA+CGG | + | chr8.1:27165552-27165571 | MS.gene011821:intron | 45.0% |
| !! | TCTGGTGCTGCTGAAGATAT+GGG | + | chr8.1:27169011-27169030 | MS.gene011821:CDS | 45.0% |
| !! | TTCCGGATAAGTTGGTAGAG+TGG | - | chr8.1:27166639-27166658 | None:intergenic | 45.0% |
| !! | AATAGTTTAATTAATTTAAA+AGG | - | chr8.1:27167315-27167334 | None:intergenic | 5.0% |
| AACAGATCTTACAGCAGCGG+GGG | - | chr8.1:27168964-27168983 | None:intergenic | 50.0% | |
| ACCCATTCGTTCCTTTGCCA+AGG | - | chr8.1:27169274-27169293 | None:intergenic | 50.0% | |
| AGAAGAGGGGAAAGACAAGG+TGG | + | chr8.1:27169382-27169401 | MS.gene011821:CDS | 50.0% | |
| ATTTGTCGGCAGCAGCTTTC+CGG | - | chr8.1:27168866-27168885 | None:intergenic | 50.0% | |
| CAACAGATCTTACAGCAGCG+GGG | - | chr8.1:27168965-27168984 | None:intergenic | 50.0% | |
| CCAACAGATCTTACAGCAGC+GGG | - | chr8.1:27168966-27168985 | None:intergenic | 50.0% | |
| CTTGATTGTCGGAAGCAGCT+CGG | - | chr8.1:27168925-27168944 | None:intergenic | 50.0% | |
| GAAAGCTGCTGCCGACAAAT+GGG | + | chr8.1:27168866-27168885 | MS.gene011821:CDS | 50.0% | |
| GAATGGGTCCAGCCATGATA+CGG | + | chr8.1:27169286-27169305 | MS.gene011821:CDS | 50.0% | |
| GGAAGAAGAGGGGAAAGACA+AGG | + | chr8.1:27169379-27169398 | MS.gene011821:CDS | 50.0% | |
| GGTTTGGCTGAAGGAAGAAG+AGG | + | chr8.1:27169367-27169386 | MS.gene011821:CDS | 50.0% | |
| GTACGTCGTGAATGCGGAAA+GGG | + | chr8.1:27169329-27169348 | MS.gene011821:CDS | 50.0% | |
| GTCTTCCGACGCTTGATTGT+CGG | - | chr8.1:27168936-27168955 | None:intergenic | 50.0% | |
| GTGGAGATTGACACTGCCAA+GGG | + | chr8.1:27169401-27169420 | MS.gene011821:CDS | 50.0% | |
| TCAGGGTGATCTCAACATCG+GGG | + | chr8.1:27169166-27169185 | MS.gene011821:CDS | 50.0% | |
| TGCTTCCGACAATCAAGCGT+CGG | + | chr8.1:27168928-27168947 | MS.gene011821:CDS | 50.0% | |
| ! | ACTGTTTGGGGTTTGGCTGA+AGG | + | chr8.1:27169358-27169377 | MS.gene011821:CDS | 50.0% |
| !! | CGGATAAGTTGGTAGAGTGG+TGG | - | chr8.1:27166636-27166655 | None:intergenic | 50.0% |
| !! | CTCTGGTGCTGCTGAAGATA+TGG | + | chr8.1:27169010-27169029 | MS.gene011821:CDS | 50.0% |
| AAGGGTAGCTGCCACAAGAG+AGG | + | chr8.1:27169419-27169438 | MS.gene011821:CDS | 55.0% | |
| AGGGTAGCTGCCACAAGAGA+GGG | + | chr8.1:27169420-27169439 | MS.gene011821:CDS | 55.0% | |
| ATCAACTTCGACCGGATCGG+TGG | + | chr8.1:27169034-27169053 | MS.gene011821:CDS | 55.0% | |
| CCCGCTGCTGTAAGATCTGT+TGG | + | chr8.1:27168963-27168982 | MS.gene011821:CDS | 55.0% | |
| CTTCACGAGTGCCAGTTCAC+TGG | - | chr8.1:27169117-27169136 | None:intergenic | 55.0% | |
| CTTCAGGGCGGTCTCAACAT+CGG | + | chr8.1:27169227-27169246 | MS.gene011821:CDS | 55.0% | |
| GGAAAGCTGCTGCCGACAAA+TGG | + | chr8.1:27168865-27168884 | MS.gene011821:CDS | 55.0% | |
| GGGAATTCACCTTCGCACTC+TGG | + | chr8.1:27168993-27169012 | MS.gene011821:CDS | 55.0% | |
| GGGATCAACTTCGACCGGAT+CGG | + | chr8.1:27169031-27169050 | MS.gene011821:CDS | 55.0% | |
| GGGCGTGAAGACCCAATTGA+TGG | + | chr8.1:27169440-27169459 | MS.gene011821:CDS | 55.0% | |
| GGTACGTCGTGAATGCGGAA+AGG | + | chr8.1:27169328-27169347 | MS.gene011821:CDS | 55.0% | |
| GGTGGAGATTGACACTGCCA+AGG | + | chr8.1:27169400-27169419 | MS.gene011821:CDS | 55.0% | |
| TCTCTTGTGGCAGCTACCCT+TGG | - | chr8.1:27169420-27169439 | None:intergenic | 55.0% | |
| TTCAGGGCGGTCTCAACATC+GGG | + | chr8.1:27169228-27169247 | MS.gene011821:CDS | 55.0% | |
| !! | GTACGAACGGGGTTGGTACT+TGG | + | chr8.1:27166492-27166511 | MS.gene011821:intron | 55.0% |
| ATCTTACAGCAGCGGGGGAC+TGG | - | chr8.1:27168959-27168978 | None:intergenic | 60.0% | |
| GGTCTTCACGCCCTCTCTTG+TGG | - | chr8.1:27169433-27169452 | None:intergenic | 60.0% | |
| GTCTGATCGGTCCACCGATC+CGG | - | chr8.1:27169048-27169067 | None:intergenic | 60.0% | |
| TCAGCAGCACCAGAGTGCGA+AGG | - | chr8.1:27169005-27169024 | None:intergenic | 60.0% | |
| TCAGGGCGGTCTCAACATCG+GGG | + | chr8.1:27169229-27169248 | MS.gene011821:CDS | 60.0% | |
| TCTTACAGCAGCGGGGGACT+GGG | - | chr8.1:27168958-27168977 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 27164988 | 27169493 | 27164988 | ID=MS.gene011821 |
| chr8.1 | mRNA | 27164988 | 27169493 | 27164988 | ID=MS.gene011821.t1;Parent=MS.gene011821 |
| chr8.1 | exon | 27164988 | 27165191 | 27164988 | ID=MS.gene011821.t1.exon1;Parent=MS.gene011821.t1 |
| chr8.1 | CDS | 27164988 | 27165191 | 27164988 | ID=cds.MS.gene011821.t1;Parent=MS.gene011821.t1 |
| chr8.1 | exon | 27168858 | 27169493 | 27168858 | ID=MS.gene011821.t1.exon2;Parent=MS.gene011821.t1 |
| chr8.1 | CDS | 27168858 | 27169493 | 27168858 | ID=cds.MS.gene011821.t1;Parent=MS.gene011821.t1 |
| Gene Sequence |
| Protein sequence |
