AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene01184

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01184.t1 MTR_2g009040 81.288 652 24 5 15 568 91 742 0.0 970
MS.gene01184.t1 MTR_3g074640 38.919 185 85 5 43 199 133 317 2.81e-26 114
MS.gene01184.t1 MTR_3g074640 38.919 185 85 5 43 199 133 317 2.94e-26 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01184.t1 AT1G22310 45.752 153 61 3 61 191 139 291 5.22e-35 137
MS.gene01184.t1 AT1G22310 45.752 153 61 3 61 191 238 390 1.90e-34 137

Find 152 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAAGAGTGACTTGAAAAT+TGG 0.224444 2.2:+71343412 MS.gene01184:CDS
CATTGATTTGGCGGCGTTAT+CGG 0.229881 2.2:+71341077 MS.gene01184:CDS
GTTGAGGGGTTTGATCATTC+TGG 0.243729 2.2:+71343253 MS.gene01184:CDS
TCCATTCGGTGAACAGAAAA+TGG 0.251866 2.2:+71343011 MS.gene01184:CDS
ATTGTTGATGCTTCTGATTT+TGG 0.254403 2.2:+71341225 MS.gene01184:CDS
AAGGAGGAAGAGGAGTTGTT+AGG 0.257264 2.2:+71341150 MS.gene01184:CDS
GAGAAGGACGGAGGGGTTAA+AGG 0.270308 2.2:+71341131 MS.gene01184:CDS
AGGAGGAAGAGGAGTTGTTA+GGG 0.296961 2.2:+71341151 MS.gene01184:CDS
ATTCAAGGAAATTGCCTTGC+TGG 0.314369 2.2:+71342501 MS.gene01184:CDS
TTTATTGCCGCAGATATATA+AGG 0.318369 2.2:+71341313 MS.gene01184:CDS
CCTTTACCTTCAGAAGTATC+AGG 0.329892 2.2:-71343214 None:intergenic
AGAAAATGTGGTCCCATCTA+AGG 0.338186 2.2:+71343501 MS.gene01184:CDS
TTGATATTCTCCAGTCCTAA+TGG 0.345479 2.2:+71342244 MS.gene01184:intron
AAACGGTGTTGTCATTGATT+TGG 0.350314 2.2:+71341065 MS.gene01184:CDS
ACCAGACACATTTGAGTTAG+TGG 0.353621 2.2:-71342458 None:intergenic
GGAAATTGCCTTGCTGGAAA+TGG 0.362080 2.2:+71342507 MS.gene01184:CDS
GAGGAGAGCTGAAGATTTGC+CGG 0.368944 2.2:+71342786 MS.gene01184:CDS
GCTTCGGAATCCTTCAATTC+CGG 0.370756 2.2:+71340936 MS.gene01184:CDS
TCAGTAGTCACTCTCTGTTC+CGG 0.374463 2.2:-71342370 None:intergenic
TTTGGTGATGTGTTGCCTTT+GGG 0.376749 2.2:+71341243 MS.gene01184:CDS
TCCTTCACCTCCGGAATTGA+AGG 0.383220 2.2:-71340946 None:intergenic
GAGTGATTTGGTTGGGCAGT+GGG 0.390198 2.2:+71341179 MS.gene01184:CDS
GCCGGGTCAGCCTAATGTCC+TGG 0.392917 2.2:+71342804 MS.gene01184:CDS
TTGAGGGGTTTGATCATTCT+GGG 0.394150 2.2:+71343254 MS.gene01184:CDS
TGAGTGATTTGGTTGGGCAG+TGG 0.396024 2.2:+71341178 MS.gene01184:CDS
GGAGAGTGGGAGTAGGAAGA+AGG 0.396269 2.2:-71340841 None:intergenic
CGAGGGTTAGAAACCTTAGA+TGG 0.402696 2.2:-71343514 None:intergenic
GGGGAAGTAGGAGGAGGAAG+AGG 0.404028 2.2:+71341199 MS.gene01184:CDS
ACCGAAAGTGAAAACGCATT+TGG 0.408495 2.2:+71341023 MS.gene01184:CDS
CGTCTCTAATGAACGATTCA+AGG 0.411445 2.2:+71342486 MS.gene01184:CDS
TCTTGATGTGTCAACTGAAT+TGG 0.411782 2.2:+71344319 MS.gene01184:CDS
CTCGCTATCTCCGCCGCAAA+CGG 0.418387 2.2:-71341111 None:intergenic
GACAGAAACTGCTGTCCATT+AGG 0.421132 2.2:-71342259 None:intergenic
CTTCTCTGATAAACTGTTTG+AGG 0.421189 2.2:-71340891 None:intergenic
TTGGGCAGTGGGGAAGTAGG+AGG 0.422115 2.2:+71341190 MS.gene01184:CDS
AGCTTCTTCTTAGTTTGAAA+AGG 0.426234 2.2:+71341271 MS.gene01184:CDS
GAGAGTGGGAGTAGGAAGAA+GGG 0.426881 2.2:-71340840 None:intergenic
GATGGAGTTATAATTAAAGA+TGG 0.429529 2.2:+71342676 MS.gene01184:CDS
TGCTCAAAACTCTATTATAG+AGG 0.430329 2.2:+71342897 MS.gene01184:CDS
CGGTGTTGTCATTGATTTGG+CGG 0.432904 2.2:+71341068 MS.gene01184:CDS
GTCATGTTGGGATTCATGTT+AGG 0.439001 2.2:+71342755 MS.gene01184:CDS
AGAGTGGGAGTAGGAAGAAG+GGG 0.439733 2.2:-71340839 None:intergenic
CCAACCGCAATTTCTGAAAC+AGG 0.442236 2.2:-71342958 None:intergenic
AGTTCGATACGGTGGAGCTT+CGG 0.447721 2.2:+71340920 MS.gene01184:CDS
TCCATCTTCGTGATCCTTGA+AGG 0.449923 2.2:-71342859 None:intergenic
CCGAGTTGTTGATGCAAAGA+TGG 0.451107 2.2:+71343134 MS.gene01184:CDS
TGGTTGGGCAGTGGGGAAGT+AGG 0.452036 2.2:+71341187 MS.gene01184:CDS
GCCACTAACTCAAATGTGTC+TGG 0.452185 2.2:+71342457 MS.gene01184:CDS
TCCTCTATTGTTCCATCCAT+CGG 0.454254 2.2:-71343096 None:intergenic
GAATTTCCATTGGCATTGCC+TGG 0.455401 2.2:+71340967 MS.gene01184:CDS
AAGGAGTGAAAATGTACTTC+CGG 0.455412 2.2:+71342351 MS.gene01184:CDS
TCTTCTGCTCCCAGGACATT+AGG 0.455500 2.2:-71342814 None:intergenic
CTCTTCCTCACTTCACCACC+AGG 0.456452 2.2:-71340985 None:intergenic
CTTGGTTCATCCGTTTCAGA+TGG 0.457726 2.2:+71342658 MS.gene01184:CDS
GGAGGGGTTAAAGGAGGAAG+AGG 0.459659 2.2:+71341140 MS.gene01184:CDS
AAAACACTTTATGACAGAAC+TGG 0.462546 2.2:-71342711 None:intergenic
CTTAGTTTGAAAAGGAAAGA+TGG 0.472588 2.2:+71341279 MS.gene01184:CDS
AATTATAACTCCATCTGAAA+CGG 0.473735 2.2:-71342668 None:intergenic
TTTGGCGGCGTTATCGGAGG+TGG 0.480395 2.2:+71341083 MS.gene01184:CDS
GAAGTGAGGAAGAGGAAGAG+AGG 0.480995 2.2:+71340994 MS.gene01184:CDS
CCGGTGGTCGGAGGGAGAGT+GGG 0.481311 2.2:-71340854 None:intergenic
CCCAGGACATTAGGCTGACC+CGG 0.482805 2.2:-71342805 None:intergenic
GAAGGTGTCTCATCCGTGAC+TGG 0.485030 2.2:-71342841 None:intergenic
AAGTGAGGAAGAGGAAGAGA+GGG 0.486983 2.2:+71340995 MS.gene01184:CDS
GTCGGAGGGAGAGTGGGAGT+AGG 0.487035 2.2:-71340848 None:intergenic
CGTCGCTACAATAGTCATGT+TGG 0.489692 2.2:+71342742 MS.gene01184:CDS
GAAGTAGGAGGAGGAAGAGG+AGG 0.489968 2.2:+71341202 MS.gene01184:CDS
AAAGGAAAGATGGTCGTGCT+TGG 0.491157 2.2:+71341289 MS.gene01184:CDS
TCCTTCAATTCCGGAGGTGA+AGG 0.492334 2.2:+71340945 MS.gene01184:CDS
GTCGCTACAATAGTCATGTT+GGG 0.498127 2.2:+71342743 MS.gene01184:CDS
TCTTCTGATGAATAGACAAC+AGG 0.501464 2.2:-71342618 None:intergenic
GGCAGTGGGGAAGTAGGAGG+AGG 0.502422 2.2:+71341193 MS.gene01184:CDS
TGAGGAAGAGGAAGAGAGGG+AGG 0.505615 2.2:+71340998 MS.gene01184:CDS
CTGTTCACCGAATGGAGACT+CGG 0.507506 2.2:-71343004 None:intergenic
GGAGGTGGAGCATCCGTTTG+CGG 0.516406 2.2:+71341098 MS.gene01184:CDS
AGGAGAGCTGAAGATTTGCC+GGG 0.517482 2.2:+71342787 MS.gene01184:CDS
AAAATGGAAAAGAGCTTGAC+TGG 0.520687 2.2:+71343027 MS.gene01184:CDS
GGAGGTGAAGGAATTTCCAT+TGG 0.522903 2.2:+71340957 MS.gene01184:CDS
CCCACTCTCCCTCCGACCAC+CGG 0.524018 2.2:+71340854 MS.gene01184:CDS
TCCGGTGGTCGGAGGGAGAG+TGG 0.525082 2.2:-71340855 None:intergenic
TTCATGTTAGGAATTATTTG+AGG 0.525350 2.2:+71342767 MS.gene01184:CDS
AATGGAAATTCCTTCACCTC+CGG 0.525587 2.2:-71340955 None:intergenic
ACCTTCAAGGATCACGAAGA+TGG 0.528471 2.2:+71342858 MS.gene01184:CDS
TATTATAGAGGATTCTATCA+TGG 0.528948 2.2:+71342909 MS.gene01184:CDS
CTTGAATCGTTCATTAGAGA+CGG 0.533348 2.2:-71342485 None:intergenic
CCGGGTCAGCCTAATGTCCT+GGG 0.533615 2.2:+71342805 MS.gene01184:CDS
CCTGTTTCAGAAATTGCGGT+TGG 0.535860 2.2:+71342958 MS.gene01184:CDS
ACCGATGGATGGAACAATAG+AGG 0.540164 2.2:+71343095 MS.gene01184:CDS
GATGTGGCGCTGACAGTTGA+GGG 0.540574 2.2:+71343238 MS.gene01184:CDS
ATCGATGATGATCCGGTGGT+CGG 0.545600 2.2:-71340866 None:intergenic
GAGATAGCGAGAAGGACGGA+GGG 0.546960 2.2:+71341123 MS.gene01184:CDS
TCACGGATGAGACACCTTCA+AGG 0.549275 2.2:+71342845 MS.gene01184:CDS
GTGATGTGTTGCCTTTGGGA+TGG 0.549426 2.2:+71341247 MS.gene01184:CDS
CAGCTTGACCTTTGATGAGA+AGG 0.551090 2.2:+71342579 MS.gene01184:CDS
CTGGAGACTCTTCTGCTCCC+AGG 0.553635 2.2:-71342822 None:intergenic
TGAGGTAATCGATGATGATC+CGG 0.553992 2.2:-71340873 None:intergenic
AGTGATTTGGTTGGGCAGTG+GGG 0.558863 2.2:+71341180 MS.gene01184:CDS
CCTGATACTTCTGAAGGTAA+AGG 0.558865 2.2:+71343214 MS.gene01184:CDS
ATAAATGCCGAGTCTCCATT+CGG 0.561569 2.2:+71342997 MS.gene01184:CDS
ATATGCATCCTTCTCATCAA+AGG 0.563994 2.2:-71342587 None:intergenic
CATCTAAGGTTTCTAACCCT+CGG 0.564092 2.2:+71343515 MS.gene01184:CDS
GAAAGTGAAAACGCATTTGG+AGG 0.566521 2.2:+71341026 MS.gene01184:CDS
GATACCTGTTTCAGAAATTG+CGG 0.569571 2.2:+71342954 MS.gene01184:CDS
ATGATGATCCGGTGGTCGGA+GGG 0.571190 2.2:-71340862 None:intergenic
GCCAACTTCTAAAGAAAATG+TGG 0.571874 2.2:+71343489 MS.gene01184:CDS
AGCTCCACCGTATCGAACTT+CGG 0.572141 2.2:-71340916 None:intergenic
ACAACAAGGCGGTATCGACT+TGG 0.574083 2.2:+71342640 MS.gene01184:CDS
CCATCTTTGCATCAACAACT+CGG 0.577011 2.2:-71343134 None:intergenic
TGATGTGGCGCTGACAGTTG+AGG 0.582466 2.2:+71343237 MS.gene01184:CDS
TCACCACCAGGCAATGCCAA+TGG 0.583467 2.2:-71340973 None:intergenic
CGTGTATTTGCACATCTGCA+AGG 0.583614 2.2:-71342534 None:intergenic
CACAGTTACAAATCACTCAA+AGG 0.590461 2.2:+71342332 MS.gene01184:CDS
AGGTAGTCCTCGTTTACCGA+TGG 0.597128 2.2:+71343080 MS.gene01184:CDS
GCAAATGACATAGTGGTGCA+AGG 0.597159 2.2:+71344341 MS.gene01184:CDS
GGAGATAGCGAGAAGGACGG+AGG 0.599301 2.2:+71341122 MS.gene01184:CDS
AGCAGAAGAGTCTCCAGTCA+CGG 0.602098 2.2:+71342828 MS.gene01184:CDS
AGTCCTCGTTTACCGATGGA+TGG 0.602501 2.2:+71343084 MS.gene01184:CDS
TCCAAAACCTTATATATCTG+CGG 0.604840 2.2:-71341320 None:intergenic
TTCTGAAGGTAAAGGTGATG+TGG 0.604907 2.2:+71343222 MS.gene01184:CDS
TGATTTGGCGGCGTTATCGG+AGG 0.605133 2.2:+71341080 MS.gene01184:CDS
CTGGTGGTGAAGTGAGGAAG+AGG 0.605528 2.2:+71340986 MS.gene01184:CDS
GATGATGATCCGGTGGTCGG+AGG 0.608390 2.2:-71340863 None:intergenic
AAGGTTCTCCATTTCCAGCA+AGG 0.609362 2.2:-71342515 None:intergenic
AGGTATCGTATTTAGTGTAG+AGG 0.610633 2.2:-71342938 None:intergenic
CAAATGACATAGTGGTGCAA+GGG 0.613652 2.2:+71344342 MS.gene01184:CDS
ATCGTATTTAGTGTAGAGGA+TGG 0.619864 2.2:-71342934 None:intergenic
GATAGCTGCTATGATGTACC+TGG 0.621105 2.2:+71343439 MS.gene01184:CDS
TCGGAATCCTTCAATTCCGG+AGG 0.621454 2.2:+71340939 MS.gene01184:CDS
TTTCCATTGGCATTGCCTGG+TGG 0.626819 2.2:+71340970 MS.gene01184:CDS
AAGGACGGAGGGGTTAAAGG+AGG 0.627983 2.2:+71341134 MS.gene01184:CDS
AGAAGATCCGAAGTTCGATA+CGG 0.628783 2.2:+71340909 MS.gene01184:CDS
GGCGGAGATAGCGAGAAGGA+CGG 0.630693 2.2:+71341119 MS.gene01184:CDS
TGAATTGGCAAATGACATAG+TGG 0.638698 2.2:+71344334 MS.gene01184:CDS
AGAAGAAGCTTCCATCCCAA+AGG 0.644423 2.2:-71341258 None:intergenic
AGATCCGAAGTTCGATACGG+TGG 0.645952 2.2:+71340912 MS.gene01184:CDS
GAGGGTTAGAAACCTTAGAT+GGG 0.649631 2.2:-71343513 None:intergenic
TAGTGGCAACAATCTGTCGT+TGG 0.652025 2.2:-71342441 None:intergenic
TTGTGATGCAGACTGAGCTG+AGG 0.653285 2.2:-71344375 None:intergenic
ATGTGGCGCTGACAGTTGAG+GGG 0.658217 2.2:+71343239 MS.gene01184:CDS
GGTGGAGCATCCGTTTGCGG+CGG 0.658249 2.2:+71341101 MS.gene01184:CDS
CATTGCCTGGTGGTGAAGTG+AGG 0.660449 2.2:+71340980 MS.gene01184:CDS
GTGGGAGTAGGAAGAAGGGG+CGG 0.661291 2.2:-71340836 None:intergenic
GTTCCATCCATCGGTAAACG+AGG 0.667007 2.2:-71343087 None:intergenic
AGATAGCGAGAAGGACGGAG+GGG 0.671249 2.2:+71341124 MS.gene01184:CDS
GATGCACCTGATACTTCTGA+AGG 0.671872 2.2:+71343208 MS.gene01184:CDS
ACATGAACATTAGAAACACC+AGG 0.677148 2.2:-71343457 None:intergenic
CTATTCATCAGAAGACAACA+AGG 0.677372 2.2:+71342626 MS.gene01184:CDS
GGTAATCGATGATGATCCGG+TGG 0.685430 2.2:-71340870 None:intergenic
GTTAGCGATCTAAATCAGCA+AGG 0.685979 2.2:+71343060 MS.gene01184:CDS
CATTCTGGGAGTGAACTGCA+AGG 0.690541 2.2:+71343268 MS.gene01184:CDS
TTGCGGCGGAGATAGCGAGA+AGG 0.699580 2.2:+71341115 MS.gene01184:CDS
TTCATCAGAAGACAACAAGG+CGG 0.779484 2.2:+71342629 MS.gene01184:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAATTATTACTTTATT+TGG + chr2.2:71343836-71343855 MS.gene01184:intron 10.0%
!! TAAAAGCAAATTATCATTAT+TGG + chr2.2:71344104-71344123 MS.gene01184:intron 15.0%
!! TTTATACAAAAACACTTATA+TGG - chr2.2:71341468-71341487 None:intergenic 15.0%
!!! ATTTTATATTCTTCAGTTTT+AGG + chr2.2:71341342-71341361 MS.gene01184:intron 15.0%
!! AATGTTCTTTGCTTATTAAT+GGG + chr2.2:71341801-71341820 MS.gene01184:intron 20.0%
!! AATTTATCCTAAAGAGTTTA+TGG + chr2.2:71342069-71342088 MS.gene01184:intron 20.0%
!! TAATGTTCTTTGCTTATTAA+TGG + chr2.2:71341800-71341819 MS.gene01184:intron 20.0%
!!! AGCTATTTCTAAAACAAATT+TGG + chr2.2:71341926-71341945 MS.gene01184:intron 20.0%
!!! GCTATTTCTAAAACAAATTT+GGG + chr2.2:71341927-71341946 MS.gene01184:intron 20.0%
!!! GTTTTATTTTGTATTGATCA+TGG + chr2.2:71343766-71343785 MS.gene01184:intron 20.0%
!!! TGTTTGTTTTGTTGTTAATT+TGG + chr2.2:71341378-71341397 MS.gene01184:intron 20.0%
!!! TTTTGTTTGGAACTAAATTT+GGG + chr2.2:71341957-71341976 MS.gene01184:intron 20.0%
!!! TTTTTGTTTGGAACTAAATT+TGG + chr2.2:71341956-71341975 MS.gene01184:intron 20.0%
! AAAAGAATCAAAGATTGTTC+TGG - chr2.2:71343546-71343565 None:intergenic 25.0%
! AAAGAATCAAAGATTGTTCT+GGG - chr2.2:71343545-71343564 None:intergenic 25.0%
! AATAAGAGTGACTTGAAAAT+TGG + chr2.2:71343412-71343431 MS.gene01184:CDS 25.0%
! AATAAGCTGAAAACAACTTA+TGG + chr2.2:71342093-71342112 MS.gene01184:intron 25.0%
! AATTATAACTCCATCTGAAA+CGG - chr2.2:71342671-71342690 None:intergenic 25.0%
! ACAAATGACAGCTATATTTA+TGG - chr2.2:71341702-71341721 None:intergenic 25.0%
! ACTATGTCTCTAATATATTC+AGG + chr2.2:71343744-71343763 MS.gene01184:intron 25.0%
! AGCAAAAACAGATATGTTTA+TGG - chr2.2:71342182-71342201 None:intergenic 25.0%
! CATAACTTATCTTGCATTAT+TGG + chr2.2:71343595-71343614 MS.gene01184:intron 25.0%
! CTTATTTCCATAAACTCTTT+AGG - chr2.2:71342079-71342098 None:intergenic 25.0%
! GAGATAATAAATTATAGGTC+TGG + chr2.2:71343876-71343895 MS.gene01184:intron 25.0%
! GATGGAGTTATAATTAAAGA+TGG + chr2.2:71342676-71342695 MS.gene01184:CDS 25.0%
! TATACTGTTTATCCTAACAT+GGG - chr2.2:71341858-71341877 None:intergenic 25.0%
! TATTATAGAGGATTCTATCA+TGG + chr2.2:71342909-71342928 MS.gene01184:CDS 25.0%
! TCATATATGTTGCAAAATAG+AGG + chr2.2:71343625-71343644 MS.gene01184:intron 25.0%
! TTATACTGTTTATCCTAACA+TGG - chr2.2:71341859-71341878 None:intergenic 25.0%
! TTCATGTTAGGAATTATTTG+AGG + chr2.2:71342767-71342786 MS.gene01184:CDS 25.0%
! TTCTCTTTGTAAGATATATG+TGG - chr2.2:71343819-71343838 None:intergenic 25.0%
! TTGGGGAGATAATAAATTAT+AGG + chr2.2:71343871-71343890 MS.gene01184:intron 25.0%
!! AATAAGTTGAAGATAGCTTA+TGG + chr2.2:71341579-71341598 MS.gene01184:intron 25.0%
!! TGTTATTTGAATCACAGAAT+TGG + chr2.2:71341725-71341744 MS.gene01184:intron 25.0%
!!! TTTGGGTATTACTTTTTGTT+TGG + chr2.2:71341944-71341963 MS.gene01184:intron 25.0%
AAAACACTTTATGACAGAAC+TGG - chr2.2:71342714-71342733 None:intergenic 30.0%
AAGAATCAAAGATTGTTCTG+GGG - chr2.2:71343544-71343563 None:intergenic 30.0%
AAGCTATCATGAAGAGTTTA+TGG + chr2.2:71341555-71341574 MS.gene01184:intron 30.0%
AGATATGTTTATGGCATGTT+TGG - chr2.2:71342173-71342192 None:intergenic 30.0%
AGTTATGCATTATACCTTGT+CGG - chr2.2:71343582-71343601 None:intergenic 30.0%
ATATGTGGAAAACATTCAAG+AGG - chr2.2:71343804-71343823 None:intergenic 30.0%
ATCTCGGCATCAATAAAAAA+TGG - chr2.2:71343902-71343921 None:intergenic 30.0%
CAACTTATGGACATTTCATA+AGG + chr2.2:71342106-71342125 MS.gene01184:intron 30.0%
GAAGAGATTGTGAACAAAAA+CGG + chr2.2:71341048-71341067 MS.gene01184:CDS 30.0%
GATATGTTTATGGCATGTTT+GGG - chr2.2:71342172-71342191 None:intergenic 30.0%
TATGCAGTAGTCAATAGATA+AGG + chr2.2:71342133-71342152 MS.gene01184:intron 30.0%
TATGTGGAAAACATTCAAGA+GGG - chr2.2:71343803-71343822 None:intergenic 30.0%
TCCAAAACCTTATATATCTG+CGG - chr2.2:71341323-71341342 None:intergenic 30.0%
TGCTCAAAACTCTATTATAG+AGG + chr2.2:71342897-71342916 MS.gene01184:CDS 30.0%
TGGTTGTACACTAATACTAA+GGG + chr2.2:71343362-71343381 MS.gene01184:intron 30.0%
TTGTGTACTTTCAACAAACA+TGG + chr2.2:71344034-71344053 MS.gene01184:intron 30.0%
TTTATTGCCGCAGATATATA+AGG + chr2.2:71341313-71341332 MS.gene01184:CDS 30.0%
! AGCTTCTTCTTAGTTTGAAA+AGG + chr2.2:71341271-71341290 MS.gene01184:CDS 30.0%
! ATTGTTGATGCTTCTGATTT+TGG + chr2.2:71341225-71341244 MS.gene01184:CDS 30.0%
! CTTAGTTTGAAAAGGAAAGA+TGG + chr2.2:71341279-71341298 MS.gene01184:CDS 30.0%
!! ACCACATTTTCTTTAGAAGT+TGG - chr2.2:71343493-71343512 None:intergenic 30.0%
!! GTTCTGTCATAAAGTGTTTT+TGG + chr2.2:71342714-71342733 MS.gene01184:CDS 30.0%
!!! CTGTTTTTGCTTGTTTGTTT+TGG + chr2.2:71342191-71342210 MS.gene01184:intron 30.0%
!!! GTTAGTTTTCTAGATAACAC+TGG + chr2.2:71343156-71343175 MS.gene01184:intron 30.0%
AAAATGGAAAAGAGCTTGAC+TGG + chr2.2:71343027-71343046 MS.gene01184:CDS 35.0%
AAATTTGCGAGGGACTAAAA+TGG + chr2.2:71341986-71342005 MS.gene01184:intron 35.0%
AAGACACCTAATCTAAGAGT+AGG - chr2.2:71343974-71343993 None:intergenic 35.0%
AAGAGTAGGAGAGATGTATA+AGG - chr2.2:71343960-71343979 None:intergenic 35.0%
AAGGAGTGAAAATGTACTTC+CGG + chr2.2:71342351-71342370 MS.gene01184:CDS 35.0%
AATTTGCGAGGGACTAAAAT+GGG + chr2.2:71341987-71342006 MS.gene01184:intron 35.0%
ACATGAACATTAGAAACACC+AGG - chr2.2:71343460-71343479 None:intergenic 35.0%
ACTTATCTTGCATTATTGGC+AGG + chr2.2:71343599-71343618 MS.gene01184:intron 35.0%
AGACTATTTGAGAGAGCTTA+TGG - chr2.2:71341623-71341642 None:intergenic 35.0%
ATATGCATCCTTCTCATCAA+AGG - chr2.2:71342590-71342609 None:intergenic 35.0%
ATCGTATTTAGTGTAGAGGA+TGG - chr2.2:71342937-71342956 None:intergenic 35.0%
ATCTCTCCTACTCTTAGATT+AGG + chr2.2:71343965-71343984 MS.gene01184:intron 35.0%
ATGACATTAATGTGCTTTGC+TGG + chr2.2:71341402-71341421 MS.gene01184:intron 35.0%
ATTAGGTGTCTTGGAGATTT+GGG + chr2.2:71343982-71344001 MS.gene01184:intron 35.0%
ATTATTGGAATCTAGCGTCA+TGG + chr2.2:71344119-71344138 MS.gene01184:intron 35.0%
ATTCCAGATGAATGAAGCAA+GGG - chr2.2:71343307-71343326 None:intergenic 35.0%
CACAGTTACAAATCACTCAA+AGG + chr2.2:71342332-71342351 MS.gene01184:CDS 35.0%
CATGCAAGCATTCTTAATCT+CGG - chr2.2:71343918-71343937 None:intergenic 35.0%
CTATTCATCAGAAGACAACA+AGG + chr2.2:71342626-71342645 MS.gene01184:CDS 35.0%
CTGGTTGTACACTAATACTA+AGG + chr2.2:71343361-71343380 MS.gene01184:intron 35.0%
CTTATCTTGCATTATTGGCA+GGG + chr2.2:71343600-71343619 MS.gene01184:intron 35.0%
CTTCTCTGATAAACTGTTTG+AGG - chr2.2:71340894-71340913 None:intergenic 35.0%
CTTGAATCGTTCATTAGAGA+CGG - chr2.2:71342488-71342507 None:intergenic 35.0%
GATACCTGTTTCAGAAATTG+CGG + chr2.2:71342954-71342973 MS.gene01184:CDS 35.0%
GGTTGTACACTAATACTAAG+GGG + chr2.2:71343363-71343382 MS.gene01184:intron 35.0%
GTTGTACACTAATACTAAGG+GGG + chr2.2:71343364-71343383 MS.gene01184:intron 35.0%
TACTCTTAGATTAGGTGTCT+TGG + chr2.2:71343973-71343992 MS.gene01184:intron 35.0%
TATCTTCTAACCTCAATTCC+TGG - chr2.2:71344260-71344279 None:intergenic 35.0%
TATGCAGTAGTCAATAGGTA+AGG + chr2.2:71341653-71341672 MS.gene01184:intron 35.0%
TCCAAGAAGAGTGAAAATTC+TGG + chr2.2:71343342-71343361 MS.gene01184:intron 35.0%
TCTTCTGATGAATAGACAAC+AGG - chr2.2:71342621-71342640 None:intergenic 35.0%
TCTTGATGTGTCAACTGAAT+TGG + chr2.2:71344319-71344338 MS.gene01184:CDS 35.0%
TGAATTGGCAAATGACATAG+TGG + chr2.2:71344334-71344353 MS.gene01184:CDS 35.0%
TTGATATTCTCCAGTCCTAA+TGG + chr2.2:71342244-71342263 MS.gene01184:intron 35.0%
! ACCAGAATTTTCACTCTTCT+TGG - chr2.2:71343346-71343365 None:intergenic 35.0%
! AGGTATCGTATTTAGTGTAG+AGG - chr2.2:71342941-71342960 None:intergenic 35.0%
! GATGATTTTGCAAGTGTTCA+AGG + chr2.2:71344293-71344312 MS.gene01184:intron 35.0%
! GCCAACTTCTAAAGAAAATG+TGG + chr2.2:71343489-71343508 MS.gene01184:CDS 35.0%
! TCCAAATGCGTTTTCACTTT+CGG - chr2.2:71341027-71341046 None:intergenic 35.0%
! TTGTTATTCCTCATTGACAG+GGG + chr2.2:71344232-71344251 MS.gene01184:intron 35.0%
!! AAACGGTGTTGTCATTGATT+TGG + chr2.2:71341065-71341084 MS.gene01184:CDS 35.0%
!! ATTTGGGCATGCTTGTTTTT+GGG + chr2.2:71343853-71343872 MS.gene01184:intron 35.0%
!! CTTGTTATTCCTCATTGACA+GGG + chr2.2:71344231-71344250 MS.gene01184:intron 35.0%
!! GTTTTGAGCAATTTCGATGA+GGG - chr2.2:71342887-71342906 None:intergenic 35.0%
!! TATTTGGGCATGCTTGTTTT+TGG + chr2.2:71343852-71343871 MS.gene01184:intron 35.0%
!! TCTTGTTATTCCTCATTGAC+AGG + chr2.2:71344230-71344249 MS.gene01184:intron 35.0%
!!! AGTTTTGAGCAATTTCGATG+AGG - chr2.2:71342888-71342907 None:intergenic 35.0%
!!! GGTTTTTGAGTGATTTGGTT+GGG + chr2.2:71341172-71341191 MS.gene01184:CDS 35.0%
!!! GTTAGGGTTTTTGAGTGATT+TGG + chr2.2:71341167-71341186 MS.gene01184:CDS 35.0%
AAAGGAAAACTCCTCATTCC+TGG - chr2.2:71341827-71341846 None:intergenic 40.0%
AATGGAAATTCCTTCACCTC+CGG - chr2.2:71340958-71340977 None:intergenic 40.0%
ACCGAAAGTGAAAACGCATT+TGG + chr2.2:71341023-71341042 MS.gene01184:CDS 40.0%
AGAAAATGTGGTCCCATCTA+AGG + chr2.2:71343501-71343520 MS.gene01184:CDS 40.0%
AGAAGATCCGAAGTTCGATA+CGG + chr2.2:71340909-71340928 MS.gene01184:CDS 40.0%
AGACCACAAGACATGCATAA+AGG - chr2.2:71343707-71343726 None:intergenic 40.0%
AGAGGGTCTTCTTAAAAACG+TGG + chr2.2:71343669-71343688 MS.gene01184:intron 40.0%
AGCTCTCTCAAATAGTCTCA+TGG + chr2.2:71341625-71341644 MS.gene01184:intron 40.0%
ATAAATGCCGAGTCTCCATT+CGG + chr2.2:71342997-71343016 MS.gene01184:CDS 40.0%
ATTCAAGGAAATTGCCTTGC+TGG + chr2.2:71342501-71342520 MS.gene01184:CDS 40.0%
CAAATGACATAGTGGTGCAA+GGG + chr2.2:71344342-71344361 MS.gene01184:CDS 40.0%
CAATCAGTTAAGTGCAGAGT+GGG - chr2.2:71344183-71344202 None:intergenic 40.0%
CCATCTTTGCATCAACAACT+CGG - chr2.2:71343137-71343156 None:intergenic 40.0%
CGAGATTAAGAATGCTTGCA+TGG + chr2.2:71343916-71343935 MS.gene01184:intron 40.0%
CGTCTCTAATGAACGATTCA+AGG + chr2.2:71342486-71342505 MS.gene01184:CDS 40.0%
CTAAAATGGGTCTTCACTCA+AGG + chr2.2:71342000-71342019 MS.gene01184:intron 40.0%
GAAAGTGAAAACGCATTTGG+AGG + chr2.2:71341026-71341045 MS.gene01184:CDS 40.0%
GACCACAAGACATGCATAAA+GGG - chr2.2:71343706-71343725 None:intergenic 40.0%
GAGGGTTAGAAACCTTAGAT+GGG - chr2.2:71343516-71343535 None:intergenic 40.0%
GATTAGGTGTCTTGGAGATT+TGG + chr2.2:71343981-71344000 MS.gene01184:intron 40.0%
GATTCCAGATGAATGAAGCA+AGG - chr2.2:71343308-71343327 None:intergenic 40.0%
GCTCTCTCAAATAGTCTCAT+GGG + chr2.2:71341626-71341645 MS.gene01184:intron 40.0%
GTCATGTTGGGATTCATGTT+AGG + chr2.2:71342755-71342774 MS.gene01184:CDS 40.0%
GTCGCTACAATAGTCATGTT+GGG + chr2.2:71342743-71342762 MS.gene01184:CDS 40.0%
GTGCTTATGCAGTAGTCAAT+AGG + chr2.2:71341648-71341667 MS.gene01184:intron 40.0%
GTTAGCGATCTAAATCAGCA+AGG + chr2.2:71343060-71343079 MS.gene01184:CDS 40.0%
GTTCCTACACGTATCATAGA+GGG + chr2.2:71343652-71343671 MS.gene01184:intron 40.0%
TCCTCTATTGTTCCATCCAT+CGG - chr2.2:71343099-71343118 None:intergenic 40.0%
TGAGGTAATCGATGATGATC+CGG - chr2.2:71340876-71340895 None:intergenic 40.0%
TGTTCCTACACGTATCATAG+AGG + chr2.2:71343651-71343670 MS.gene01184:intron 40.0%
TTCATCAGAAGACAACAAGG+CGG + chr2.2:71342629-71342648 MS.gene01184:CDS 40.0%
TTGAGGGGTTTGATCATTCT+GGG + chr2.2:71343254-71343273 MS.gene01184:CDS 40.0%
! ACCAGACACATTTGAGTTAG+TGG - chr2.2:71342461-71342480 None:intergenic 40.0%
! CATCTAAGGTTTCTAACCCT+CGG + chr2.2:71343515-71343534 MS.gene01184:CDS 40.0%
! CCTGATACTTCTGAAGGTAA+AGG + chr2.2:71343214-71343233 MS.gene01184:CDS 40.0%
! GCCGCAGATATATAAGGTTT+TGG + chr2.2:71341319-71341338 MS.gene01184:intron 40.0%
! TCCATTCGGTGAACAGAAAA+TGG + chr2.2:71343011-71343030 MS.gene01184:CDS 40.0%
! TCCATTTTCTGTTCACCGAA+TGG - chr2.2:71343015-71343034 None:intergenic 40.0%
! TCGTATCTGCAGTCTCTTTT+TGG + chr2.2:71342298-71342317 MS.gene01184:CDS 40.0%
! TCTTTGCTTATTAATGGGCC+AGG + chr2.2:71341806-71341825 MS.gene01184:intron 40.0%
! TTATTAATGGGCCAGGAATG+AGG + chr2.2:71341813-71341832 MS.gene01184:intron 40.0%
! TTCTGAAGGTAAAGGTGATG+TGG + chr2.2:71343222-71343241 MS.gene01184:CDS 40.0%
! TTTTCACTCTTCTTGGATCC+AGG - chr2.2:71343339-71343358 None:intergenic 40.0%
!! CCTTTACCTTCAGAAGTATC+AGG - chr2.2:71343217-71343236 None:intergenic 40.0%
!! TTTGGTGATGTGTTGCCTTT+GGG + chr2.2:71341243-71341262 MS.gene01184:CDS 40.0%
!!! GGGTTTTTGAGTGATTTGGT+TGG + chr2.2:71341171-71341190 MS.gene01184:CDS 40.0%
!!! TTTGGGCATGCTTGTTTTTG+GGG + chr2.2:71343854-71343873 MS.gene01184:intron 40.0%
!!! TTTTGGTGATGTGTTGCCTT+TGG + chr2.2:71341242-71341261 MS.gene01184:CDS 40.0%
AAACTGCTGTCCATTAGGAC+TGG - chr2.2:71342257-71342276 None:intergenic 45.0%
AAAGGAAAGATGGTCGTGCT+TGG + chr2.2:71341289-71341308 MS.gene01184:CDS 45.0%
AAGGAGGAAGAGGAGTTGTT+AGG + chr2.2:71341150-71341169 MS.gene01184:CDS 45.0%
AAGGTTCTCCATTTCCAGCA+AGG - chr2.2:71342518-71342537 None:intergenic 45.0%
AAGTGAGGAAGAGGAAGAGA+GGG + chr2.2:71340995-71341014 MS.gene01184:CDS 45.0%
ACCGATGGATGGAACAATAG+AGG + chr2.2:71343095-71343114 MS.gene01184:CDS 45.0%
ACCTTCAAGGATCACGAAGA+TGG + chr2.2:71342858-71342877 MS.gene01184:CDS 45.0%
AGAAGAAGCTTCCATCCCAA+AGG - chr2.2:71341261-71341280 None:intergenic 45.0%
AGACCCTCTATGATACGTGT+AGG - chr2.2:71343658-71343677 None:intergenic 45.0%
AGCCCTTTATGCATGTCTTG+TGG + chr2.2:71343701-71343720 MS.gene01184:intron 45.0%
AGGAGGAAGAGGAGTTGTTA+GGG + chr2.2:71341151-71341170 MS.gene01184:CDS 45.0%
AGTCCCTTGCTTCATTCATC+TGG + chr2.2:71343301-71343320 MS.gene01184:intron 45.0%
CAGCTTGACCTTTGATGAGA+AGG + chr2.2:71342579-71342598 MS.gene01184:CDS 45.0%
CCAATCAGTTAAGTGCAGAG+TGG - chr2.2:71344184-71344203 None:intergenic 45.0%
CCACTCTGCACTTAACTGAT+TGG + chr2.2:71344181-71344200 MS.gene01184:intron 45.0%
CCGAGTTGTTGATGCAAAGA+TGG + chr2.2:71343134-71343153 MS.gene01184:CDS 45.0%
CCTGTTTCAGAAATTGCGGT+TGG + chr2.2:71342958-71342977 MS.gene01184:CDS 45.0%
CGAGGGTTAGAAACCTTAGA+TGG - chr2.2:71343517-71343536 None:intergenic 45.0%
CGTCGCTACAATAGTCATGT+TGG + chr2.2:71342742-71342761 MS.gene01184:CDS 45.0%
CGTGTATTTGCACATCTGCA+AGG - chr2.2:71342537-71342556 None:intergenic 45.0%
CTAACATGGGCTCACATCAA+AGG - chr2.2:71341845-71341864 None:intergenic 45.0%
CTTGGTTCATCCGTTTCAGA+TGG + chr2.2:71342658-71342677 MS.gene01184:CDS 45.0%
CTTTGATGTGAGCCCATGTT+AGG + chr2.2:71341843-71341862 MS.gene01184:intron 45.0%
GAATTTCCATTGGCATTGCC+TGG + chr2.2:71340967-71340986 MS.gene01184:CDS 45.0%
GACAGAAACTGCTGTCCATT+AGG - chr2.2:71342262-71342281 None:intergenic 45.0%
GATAGCTGCTATGATGTACC+TGG + chr2.2:71343439-71343458 MS.gene01184:CDS 45.0%
GATGCACCTGATACTTCTGA+AGG + chr2.2:71343208-71343227 MS.gene01184:CDS 45.0%
GCAAATGACATAGTGGTGCA+AGG + chr2.2:71344341-71344360 MS.gene01184:CDS 45.0%
GCCACTAACTCAAATGTGTC+TGG + chr2.2:71342457-71342476 MS.gene01184:CDS 45.0%
GCTTCGGAATCCTTCAATTC+CGG + chr2.2:71340936-71340955 MS.gene01184:CDS 45.0%
GGAAATTGCCTTGCTGGAAA+TGG + chr2.2:71342507-71342526 MS.gene01184:CDS 45.0%
GGAGGTGAAGGAATTTCCAT+TGG + chr2.2:71340957-71340976 MS.gene01184:CDS 45.0%
GTTGAGGGGTTTGATCATTC+TGG + chr2.2:71343253-71343272 MS.gene01184:CDS 45.0%
TAGTGGCAACAATCTGTCGT+TGG - chr2.2:71342444-71342463 None:intergenic 45.0%
TCAGTAGTCACTCTCTGTTC+CGG - chr2.2:71342373-71342392 None:intergenic 45.0%
TCCATCTTCGTGATCCTTGA+AGG - chr2.2:71342862-71342881 None:intergenic 45.0%
TGGGCACAAGAAATTTGCGA+GGG + chr2.2:71341976-71341995 MS.gene01184:intron 45.0%
TTCTTGGATCCAGGTTTCAG+TGG - chr2.2:71343330-71343349 None:intergenic 45.0%
TTGGGCACAAGAAATTTGCG+AGG + chr2.2:71341975-71341994 MS.gene01184:intron 45.0%
! ATCTGGAATCCACTGAAACC+TGG + chr2.2:71343318-71343337 MS.gene01184:intron 45.0%
!! CATTGATTTGGCGGCGTTAT+CGG + chr2.2:71341077-71341096 MS.gene01184:CDS 45.0%
!! CCAACCGCAATTTCTGAAAC+AGG - chr2.2:71342961-71342980 None:intergenic 45.0%
!! CGGTGTTGTCATTGATTTGG+CGG + chr2.2:71341068-71341087 MS.gene01184:CDS 45.0%
!!! AAAAAATTATTACTTTATTT+GGG + chr2.2:71343837-71343856 MS.gene01184:intron 5.0%
AGAGTGGGAGTAGGAAGAAG+GGG - chr2.2:71340842-71340861 None:intergenic 50.0%
AGATCCGAAGTTCGATACGG+TGG + chr2.2:71340912-71340931 MS.gene01184:CDS 50.0%
AGCAGAAGAGTCTCCAGTCA+CGG + chr2.2:71342828-71342847 MS.gene01184:CDS 50.0%
AGCTCCACCGTATCGAACTT+CGG - chr2.2:71340919-71340938 None:intergenic 50.0%
AGGAGAGCTGAAGATTTGCC+GGG + chr2.2:71342787-71342806 MS.gene01184:CDS 50.0%
AGGTAGTCCTCGTTTACCGA+TGG + chr2.2:71343080-71343099 MS.gene01184:CDS 50.0%
AGGTGTCTTGGAGATTTGGG+TGG + chr2.2:71343985-71344004 MS.gene01184:intron 50.0%
AGTCCTCGTTTACCGATGGA+TGG + chr2.2:71343084-71343103 MS.gene01184:CDS 50.0%
AGTTCGATACGGTGGAGCTT+CGG + chr2.2:71340920-71340939 MS.gene01184:CDS 50.0%
ATCGATGATGATCCGGTGGT+CGG - chr2.2:71340869-71340888 None:intergenic 50.0%
CAGTTAAGTGCAGAGTGGGT+GGG - chr2.2:71344179-71344198 None:intergenic 50.0%
CTGTTCACCGAATGGAGACT+CGG - chr2.2:71343007-71343026 None:intergenic 50.0%
GAAGTGAGGAAGAGGAAGAG+AGG + chr2.2:71340994-71341013 MS.gene01184:CDS 50.0%
GAGAGTGGGAGTAGGAAGAA+GGG - chr2.2:71340843-71340862 None:intergenic 50.0%
GAGGAGAGCTGAAGATTTGC+CGG + chr2.2:71342786-71342805 MS.gene01184:CDS 50.0%
GGTAATCGATGATGATCCGG+TGG - chr2.2:71340873-71340892 None:intergenic 50.0%
GTTCCATCCATCGGTAAACG+AGG - chr2.2:71343090-71343109 None:intergenic 50.0%
TCACGGATGAGACACCTTCA+AGG + chr2.2:71342845-71342864 MS.gene01184:CDS 50.0%
TCAGTTAAGTGCAGAGTGGG+TGG - chr2.2:71344180-71344199 None:intergenic 50.0%
TCCTTCAATTCCGGAGGTGA+AGG + chr2.2:71340945-71340964 MS.gene01184:CDS 50.0%
TCCTTCACCTCCGGAATTGA+AGG - chr2.2:71340949-71340968 None:intergenic 50.0%
TCGGAATCCTTCAATTCCGG+AGG + chr2.2:71340939-71340958 MS.gene01184:CDS 50.0%
TCTTCTGCTCCCAGGACATT+AGG - chr2.2:71342817-71342836 None:intergenic 50.0%
TTCTGCATTCAGCTCCGACA+AGG + chr2.2:71343565-71343584 MS.gene01184:intron 50.0%
TTGTGATGCAGACTGAGCTG+AGG - chr2.2:71344378-71344397 None:intergenic 50.0%
TTTCCATTGGCATTGCCTGG+TGG + chr2.2:71340970-71340989 MS.gene01184:CDS 50.0%
! CATTCTGGGAGTGAACTGCA+AGG + chr2.2:71343268-71343287 MS.gene01184:CDS 50.0%
! GTGATGTGTTGCCTTTGGGA+TGG + chr2.2:71341247-71341266 MS.gene01184:CDS 50.0%
!! ACAACAAGGCGGTATCGACT+TGG + chr2.2:71342640-71342659 MS.gene01184:CDS 50.0%
!! AGATTGTTCTGGGGATACCG+AGG - chr2.2:71343535-71343554 None:intergenic 50.0%
!! AGTGATTTGGTTGGGCAGTG+GGG + chr2.2:71341180-71341199 MS.gene01184:CDS 50.0%
!! GAGTGATTTGGTTGGGCAGT+GGG + chr2.2:71341179-71341198 MS.gene01184:CDS 50.0%
!! GATTGTTCTGGGGATACCGA+GGG - chr2.2:71343534-71343553 None:intergenic 50.0%
!! TGAGTGATTTGGTTGGGCAG+TGG + chr2.2:71341178-71341197 MS.gene01184:CDS 50.0%
AAGGACGGAGGGGTTAAAGG+AGG + chr2.2:71341134-71341153 MS.gene01184:CDS 55.0%
AGATAGCGAGAAGGACGGAG+GGG + chr2.2:71341124-71341143 MS.gene01184:CDS 55.0%
ATGATGATCCGGTGGTCGGA+GGG - chr2.2:71340865-71340884 None:intergenic 55.0%
CTCTTCCTCACTTCACCACC+AGG - chr2.2:71340988-71341007 None:intergenic 55.0%
GAAGTAGGAGGAGGAAGAGG+AGG + chr2.2:71341202-71341221 MS.gene01184:CDS 55.0%
GACAGGGGTTCCAGGAATTG+AGG + chr2.2:71344247-71344266 MS.gene01184:intron 55.0%
GAGAAGGACGGAGGGGTTAA+AGG + chr2.2:71341131-71341150 MS.gene01184:CDS 55.0%
GAGATAGCGAGAAGGACGGA+GGG + chr2.2:71341123-71341142 MS.gene01184:CDS 55.0%
GGAGAGTGGGAGTAGGAAGA+AGG - chr2.2:71340844-71340863 None:intergenic 55.0%
GGAGGGGTTAAAGGAGGAAG+AGG + chr2.2:71341140-71341159 MS.gene01184:CDS 55.0%
TCACCACCAGGCAATGCCAA+TGG - chr2.2:71340976-71340995 None:intergenic 55.0%
TCCTCATTGACAGGGGTTCC+AGG + chr2.2:71344239-71344258 MS.gene01184:intron 55.0%
TCCTGGAACCCCTGTCAATG+AGG - chr2.2:71344243-71344262 None:intergenic 55.0%
TGAGGAAGAGGAAGAGAGGG+AGG + chr2.2:71340998-71341017 MS.gene01184:CDS 55.0%
TTTGGGTGGCGCTAGTTGCT+AGG + chr2.2:71343999-71344018 MS.gene01184:intron 55.0%
! CATTGCCTGGTGGTGAAGTG+AGG + chr2.2:71340980-71340999 MS.gene01184:CDS 55.0%
! CTGGTGGTGAAGTGAGGAAG+AGG + chr2.2:71340986-71341005 MS.gene01184:CDS 55.0%
! TGATTTGGCGGCGTTATCGG+AGG + chr2.2:71341080-71341099 MS.gene01184:CDS 55.0%
!! ATGTGGCGCTGACAGTTGAG+GGG + chr2.2:71343239-71343258 MS.gene01184:CDS 55.0%
!! GAAGGTGTCTCATCCGTGAC+TGG - chr2.2:71342844-71342863 None:intergenic 55.0%
!! GATGTGGCGCTGACAGTTGA+GGG + chr2.2:71343238-71343257 MS.gene01184:CDS 55.0%
!! TGATGTGGCGCTGACAGTTG+AGG + chr2.2:71343237-71343256 MS.gene01184:CDS 55.0%
CCCAGGACATTAGGCTGACC+CGG - chr2.2:71342808-71342827 None:intergenic 60.0%
CCGGGTCAGCCTAATGTCCT+GGG + chr2.2:71342805-71342824 MS.gene01184:CDS 60.0%
CTCGCTATCTCCGCCGCAAA+CGG - chr2.2:71341114-71341133 None:intergenic 60.0%
CTGGAGACTCTTCTGCTCCC+AGG - chr2.2:71342825-71342844 None:intergenic 60.0%
GATGATGATCCGGTGGTCGG+AGG - chr2.2:71340866-71340885 None:intergenic 60.0%
GGAGATAGCGAGAAGGACGG+AGG + chr2.2:71341122-71341141 MS.gene01184:CDS 60.0%
GGCAACAGAAGCAGCAGCAG+GGG - chr2.2:71342407-71342426 None:intergenic 60.0%
GGCGGAGATAGCGAGAAGGA+CGG + chr2.2:71341119-71341138 MS.gene01184:CDS 60.0%
GGGCAACAGAAGCAGCAGCA+GGG - chr2.2:71342408-71342427 None:intergenic 60.0%
GGGGAAGTAGGAGGAGGAAG+AGG + chr2.2:71341199-71341218 MS.gene01184:CDS 60.0%
GTGGGAGTAGGAAGAAGGGG+CGG - chr2.2:71340839-71340858 None:intergenic 60.0%
TGGTTGGGCAGTGGGGAAGT+AGG + chr2.2:71341187-71341206 MS.gene01184:CDS 60.0%
TTGCGGCGGAGATAGCGAGA+AGG + chr2.2:71341115-71341134 MS.gene01184:CDS 60.0%
TTGGGCAGTGGGGAAGTAGG+AGG + chr2.2:71341190-71341209 MS.gene01184:CDS 60.0%
TTTGGCGGCGTTATCGGAGG+TGG + chr2.2:71341083-71341102 MS.gene01184:CDS 60.0%
! GGAGGTGGAGCATCCGTTTG+CGG + chr2.2:71341098-71341117 MS.gene01184:CDS 60.0%
CGGGCAACAGAAGCAGCAGC+AGG - chr2.2:71342409-71342428 None:intergenic 65.0%
GCCGGGTCAGCCTAATGTCC+TGG + chr2.2:71342804-71342823 MS.gene01184:CDS 65.0%
GGCAGTGGGGAAGTAGGAGG+AGG + chr2.2:71341193-71341212 MS.gene01184:CDS 65.0%
GTCGGAGGGAGAGTGGGAGT+AGG - chr2.2:71340851-71340870 None:intergenic 65.0%
GTCGTTGGTCCTGCTCCTCG+CGG - chr2.2:71342429-71342448 None:intergenic 65.0%
TCGTTGGTCCTGCTCCTCGC+GGG - chr2.2:71342428-71342447 None:intergenic 65.0%
TTCTGTTGCCCGCGAGGAGC+AGG + chr2.2:71342417-71342436 MS.gene01184:intron 65.0%
! GGTGGAGCATCCGTTTGCGG+CGG + chr2.2:71341101-71341120 MS.gene01184:CDS 65.0%
! TGCTGCTTCTGTTGCCCGCG+AGG + chr2.2:71342411-71342430 MS.gene01184:intron 65.0%
CCCACTCTCCCTCCGACCAC+CGG + chr2.2:71340854-71340873 MS.gene01184:CDS 70.0%
CCGGTGGTCGGAGGGAGAGT+GGG - chr2.2:71340857-71340876 None:intergenic 70.0%
TCCGGTGGTCGGAGGGAGAG+TGG - chr2.2:71340858-71340877 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 71340823 71344400 71340823 ID=MS.gene01184
chr2.2 mRNA 71340823 71344400 71340823 ID=MS.gene01184.t1;Parent=MS.gene01184
chr2.2 exon 71340823 71341334 71340823 ID=MS.gene01184.t1.exon1;Parent=MS.gene01184.t1
chr2.2 CDS 71340823 71341334 71340823 ID=cds.MS.gene01184.t1;Parent=MS.gene01184.t1
chr2.2 exon 71342258 71342396 71342258 ID=MS.gene01184.t1.exon2;Parent=MS.gene01184.t1
chr2.2 CDS 71342258 71342396 71342258 ID=cds.MS.gene01184.t1;Parent=MS.gene01184.t1
chr2.2 exon 71342433 71343155 71342433 ID=MS.gene01184.t1.exon3;Parent=MS.gene01184.t1
chr2.2 CDS 71342433 71343155 71342433 ID=cds.MS.gene01184.t1;Parent=MS.gene01184.t1
chr2.2 exon 71343199 71343301 71343199 ID=MS.gene01184.t1.exon4;Parent=MS.gene01184.t1
chr2.2 CDS 71343199 71343301 71343199 ID=cds.MS.gene01184.t1;Parent=MS.gene01184.t1
chr2.2 exon 71343404 71343536 71343404 ID=MS.gene01184.t1.exon5;Parent=MS.gene01184.t1
chr2.2 CDS 71343404 71343536 71343404 ID=cds.MS.gene01184.t1;Parent=MS.gene01184.t1
chr2.2 exon 71344307 71344400 71344307 ID=MS.gene01184.t1.exon6;Parent=MS.gene01184.t1
chr2.2 CDS 71344307 71344400 71344307 ID=cds.MS.gene01184.t1;Parent=MS.gene01184.t1
Gene Sequence

>MS.gene01184

ATGTCGCGTCGCGCCGCCCCTTCTTCCTACTCCCACTCTCCCTCCGACCACCGGATCATCATCGATTACCTCAAACAGTTTATCAGAGAAGATCCGAAGTTCGATACGGTGGAGCTTCGGAATCCTTCAATTCCGGAGGTGAAGGAATTTCCATTGGCATTGCCTGGTGGTGAAGTGAGGAAGAGGAAGAGAGGGAGGAAACCGAAAGTGAAAACGCATTTGGAGGAAGAGATTGTGAACAAAAACGGTGTTGTCATTGATTTGGCGGCGTTATCGGAGGTGGAGCATCCGTTTGCGGCGGAGATAGCGAGAAGGACGGAGGGGTTAAAGGAGGAAGAGGAGTTGTTAGGGTTTTTGAGTGATTTGGTTGGGCAGTGGGGAAGTAGGAGGAGGAAGAGGAGGATTGTTGATGCTTCTGATTTTGGTGATGTGTTGCCTTTGGGATGGAAGCTTCTTCTTAGTTTGAAAAGGAAAGATGGTCGTGCTTGGATTTATTGCCGCAGATATATAAGGTTTTGGATTTTATATTCTTCAGTTTTAGGATAATACACTATATGTTTGTTTTGTTGTTAATTTGGAATGACATTAATGTGCTTTGCTGGTATAGTCAGTTTAATTAAGCACTTATTGCATAATTGATTACCATATAAGTGTTTTTGTATAAAACTATTTCTATAACAAAAGATAAAATGAAATCAAACTGTTTCTATATAAGATATAAGCTGTTTTCATAAGCTATCATGAAGAGTTTATGGAAATAAGTTGAAGATAGCTTATGGACATGACATAAGCTGTTTCCATAAGCTCTCTCAAATAGTCTCATGGGTGCTTATGCAGTAGTCAATAGGTAAGGTCAAATAAGTCAACTCAAACATGCCATAAATATAGCTGTCATTTGTTTATGTTATTTGAATCACAGAATTGGAAAGTTTACATGTATTATTAATGTGTTGTTTTTCGTTAACTTCTTATAGAATTAATGTTCTTTGCTTATTAATGGGCCAGGAATGAGGAGTTTTCCTTTGATGTGAGCCCATGTTAGGATAAACAGTATAATGAAGTGCTCATAGTCTAAGTGCTTACTATATAAGTGCTTATGTAGAAGCTATTTCTAAAACAAATTTGGGTATTACTTTTTGTTTGGAACTAAATTTGGGCACAAGAAATTTGCGAGGGACTAAAATGGGTCTTCACTCAAGGATAAGATATAGTCAATCTGTTTTTTATATATGCTACACTGTTTTATAATTTATCCTAAAGAGTTTATGGAAATAAGCTGAAAACAACTTATGGACATTTCATAAGGTGTTTATGCAGTAGTCAATAGATAAGGTCAAATAAGTCAACCCAAACATGCCATAAACATATCTGTTTTTGCTTGTTTGTTTTGGTTTGCTTTTTTGTGCTTATTTGTTTCTTGTTTGATATTCTCCAGTCCTAATGGACAGCAGTTTCTGTCTTGCAAAGAAGTTTCTTCGTATCTGCAGTCTCTTTTTGGTCACACTGATACACAGTTACAAATCACTCAAAGGAGTGAAAATGTACTTCCGGAACAGAGAGTGACTACTGAAAATGTAAGTACCCCTGCTGCTGCTTCTGTTGCCCGCGAGGAGCAGGACCAACGACAGATTGTTGCCACTAACTCAAATGTGTCTGGTTTGTCCGTCTCTAATGAACGATTCAAGGAAATTGCCTTGCTGGAAATGGAGAACCTTGCAGATGTGCAAATACACGATCTGTTTGAATGTCACAAGTGCAGCTTGACCTTTGATGAGAAGGATGCATATTTGCAGCACCTGTTGTCTATTCATCAGAAGACAACAAGGCGGTATCGACTTGGTTCATCCGTTTCAGATGGAGTTATAATTAAAGATGGAAAATTTGAGTGCCAGTTCTGTCATAAAGTGTTTTTGGAAAAACGTCGCTACAATAGTCATGTTGGGATTCATGTTAGGAATTATTTGAGGAGAGCTGAAGATTTGCCGGGTCAGCCTAATGTCCTGGGAGCAGAAGAGTCTCCAGTCACGGATGAGACACCTTCAAGGATCACGAAGATGGATGCCCTCATCGAAATTGCTCAAAACTCTATTATAGAGGATTCTATCATGGAGCCATCCTCTACACTAAATACGATACCTGTTTCAGAAATTGCGGTTGGCGACTTAGATGAAGATATAAATGCCGAGTCTCCATTCGGTGAACAGAAAATGGAAAAGAGCTTGACTGGCACAAATGTAGTTAGCGATCTAAATCAGCAAGGTAGTCCTCGTTTACCGATGGATGGAACAATAGAGGAAATTGATGCTAATAACCGAGTTGTTGATGCAAAGATGGTTAGTTTTCTAGATAACACTGGTTTGTTATCTGTAATATAAGAAAAATGTTGATGCACCTGATACTTCTGAAGGTAAAGGTGATGTGGCGCTGACAGTTGAGGGGTTTGATCATTCTGGGAGTGAACTGCAAGGAGCTTCTCAAAGTCCCTTGCTTCATTCATCTGGAATCCACTGAAACCTGGATCCAAGAAGAGTGAAAATTCTGGTTGTACACTAATACTAAGGGGGATCTTAAATTGATGAAGACAGTAGCAATAAGAGTGACTTGAAAATTGGTTTAGATAGCTGCTATGATGTACCTGGTGTTTCTAATGTTCATGTGACAGCAATGCCAACTTCTAAAGAAAATGTGGTCCCATCTAAGGTTTCTAACCCTCGGTATCCCCAGAACAATCTTTGATTCTTTTTCTGCATTCAGCTCCGACAAGGTATAATGCATAACTTATCTTGCATTATTGGCAGGGTTTCATATATGTTGCAAAATAGAGGAAATGTTCCTACACGTATCATAGAGGGTCTTCTTAAAAACGTGGTTAATTTGAAGCCCTTTATGCATGTCTTGTGGTCTACTGTGCTTTACTTTCAACTATGTCTCTAATATATTCAGGTTTTATTTTGTATTGATCATGGATTGACGTGCTCCCTCTTGAATGTTTTCCACATATATCTTACAAAGAGAAAAAATTATTACTTTATTTGGGCATGCTTGTTTTTGGGGAGATAATAAATTATAGGTCTGGCCATTTTTTATTGATGCCGAGATTAAGAATGCTTGCATGGTATCTACTTGTTCTTCAGCCTTATACATCTCTCCTACTCTTAGATTAGGTGTCTTGGAGATTTGGGTGGCGCTAGTTGCTAGGTTATGCACGTGCTTGTGTACTTTCAACAAACATGGCTATTATATTTCGTATTTGATCTATCTTTCTTCATTTGAACTATTTGTAAAAGCAAATTATCATTATTGGAATCTAGCGTCATGGACATCAAATTCTCTTATGCAGCAATTAGCTACTACCCACCCACTCTGCACTTAACTGATTGGCAGTGCTGATCTTACTTGAAATTGATTCTTGTTATTCCTCATTGACAGGGGTTCCAGGAATTGAGGTTAGAAGATATTAGTTCTCTTGAGATGATTTTGCAAGTGTTCAAGGTTCTCTTGATGTGTCAACTGAATTGGCAAATGACATAGTGGTGCAAGGGACATGTGCATCCTCAGCTCAGTCTGCATCACAAGAA
Protein sequence

>MS.gene01184.t1

MSRRAAPSSYSHSPSDHRIIIDYLKQFIREDPKFDTVELRNPSIPEVKEFPLALPGGEVRKRKRGRKPKVKTHLEEEIVNKNGVVIDLAALSEVEHPFAAEIARRTEGLKEEEELLGFLSDLVGQWGSRRRKRRIVDASDFGDVLPLGWKLLLSLKRKDGRAWIYCRRYISPNGQQFLSCKEVSSYLQSLFGHTDTQLQITQRSENVLPEQRVTTENEQDQRQIVATNSNVSGLSVSNERFKEIALLEMENLADVQIHDLFECHKCSLTFDEKDAYLQHLLSIHQKTTRRYRLGSSVSDGVIIKDGKFECQFCHKVFLEKRRYNSHVGIHVRNYLRRAEDLPGQPNVLGAEESPVTDETPSRITKMDALIEIAQNSIIEDSIMEPSSTLNTIPVSEIAVGDLDEDINAESPFGEQKMEKSLTGTNVVSDLNQQGSPRLPMDGTIEEIDANNRVVDAKMKNVDAPDTSEGKGDVALTVEGFDHSGSELQGASQNSSNKSDLKIGLDSCYDVPGVSNVHVTAMPTSKENVVPSKVSNPRVQGSLDVSTELANDIVVQGTCASSAQSASQE