AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011859

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011859.t1 MTR_8g079580 85.646 209 20 3 1 199 1 209 3.05e-118 336
MS.gene011859.t1 MTR_8g079660 53.801 171 64 2 1 157 1 170 4.57e-55 176
MS.gene011859.t1 MTR_8g079620 44.398 241 95 8 1 207 1 236 1.95e-51 166
MS.gene011859.t1 MTR_3g073690 57.658 111 46 1 8 118 9 118 1.20e-38 132
MS.gene011859.t1 MTR_5g017950 52.066 121 57 1 1 121 1 120 4.90e-37 132
MS.gene011859.t1 MTR_3g452660 44.172 163 66 4 8 146 7 168 1.34e-35 127
MS.gene011859.t1 MTR_3g031660 50.000 102 50 1 8 109 7 107 5.48e-32 115
MS.gene011859.t1 MTR_5g083230 50.980 102 49 1 8 109 6 106 2.30e-31 113
MS.gene011859.t1 MTR_4g105170 50.476 105 51 1 8 112 11 114 9.26e-31 112
MS.gene011859.t1 MTR_3g071590 47.706 109 56 1 1 109 1 108 6.14e-30 108
MS.gene011859.t1 MTR_2g093310 42.029 138 76 2 5 142 30 163 1.29e-29 109
MS.gene011859.t1 MTR_3g077240 48.182 110 56 1 8 117 10 118 1.56e-29 108
MS.gene011859.t1 MTR_7g033800 49.524 105 52 1 8 112 11 114 3.80e-29 107
MS.gene011859.t1 MTR_4g060950 34.831 178 87 3 5 180 21 171 7.52e-29 107
MS.gene011859.t1 MTR_3g094690 50.467 107 52 1 6 112 45 150 1.15e-28 108
MS.gene011859.t1 MTR_5g083960 50.476 105 51 1 8 112 39 142 2.22e-28 106
MS.gene011859.t1 MTR_2g068760 48.571 105 53 1 6 110 11 114 4.08e-28 104
MS.gene011859.t1 MTR_3g094690 50.467 107 51 2 6 112 45 149 8.58e-28 105
MS.gene011859.t1 MTR_6g005070 48.077 104 53 1 8 111 9 111 1.09e-27 102
MS.gene011859.t1 MTR_4g083680 50.495 101 49 1 8 108 15 114 3.19e-27 102
MS.gene011859.t1 MTR_5g075020 52.336 107 50 1 6 112 45 150 3.25e-27 104
MS.gene011859.t1 MTR_5g075020 52.336 107 50 1 6 112 41 146 3.45e-27 103
MS.gene011859.t1 MTR_6g005080 46.667 105 55 1 8 112 10 113 5.28e-27 100
MS.gene011859.t1 MTR_5g093010 46.078 102 54 1 9 110 6 106 7.83e-27 100
MS.gene011859.t1 MTR_7g028905 45.370 108 58 1 5 112 2 108 8.86e-27 99.8
MS.gene011859.t1 MTR_1g095850 49.020 102 51 1 9 110 73 173 1.24e-26 102
MS.gene011859.t1 MTR_8g040900 49.091 110 55 1 8 117 7 115 6.81e-26 100
MS.gene011859.t1 MTR_5g083010 45.631 103 55 1 9 111 12 113 1.16e-24 95.9
MS.gene011859.t1 MTR_3g071420 47.959 98 50 1 9 106 15 111 1.55e-23 93.2
MS.gene011859.t1 MTR_6g027710 43.519 108 59 2 3 109 35 141 4.17e-23 93.2
MS.gene011859.t1 MTR_4g099230 43.689 103 56 2 9 110 3 104 9.25e-22 87.8
MS.gene011859.t1 MTR_7g096530 41.667 108 61 2 8 114 14 120 9.65e-21 86.7
MS.gene011859.t1 MTR_7g074990 43.689 103 56 2 8 109 20 121 1.90e-20 86.3
MS.gene011859.t1 MTR_8g036085 41.509 106 60 2 8 112 23 127 2.71e-20 85.9
MS.gene011859.t1 MTR_1g070220 35.862 145 74 5 8 138 15 154 8.56e-20 84.0
MS.gene011859.t1 MTR_6g011250 40.777 103 59 2 9 110 10 111 2.31e-19 82.4
MS.gene011859.t1 MTR_6g027700 40.385 104 60 2 4 106 3 105 3.09e-19 82.4
MS.gene011859.t1 MTR_1g070205 42.000 100 56 2 8 106 12 110 1.68e-18 81.3
MS.gene011859.t1 MTR_6g011200 38.679 106 60 3 5 106 3 107 5.35e-18 80.1
MS.gene011859.t1 MTR_5g085390 40.909 110 60 3 5 110 3 111 8.58e-18 79.3
MS.gene011859.t1 MTR_7g075230 40.000 105 61 1 8 110 12 116 8.66e-18 78.6
MS.gene011859.t1 MTR_8g036105 43.269 104 57 2 8 110 18 120 1.53e-17 78.2
MS.gene011859.t1 MTR_7g096610 40.000 100 58 2 8 106 8 106 1.97e-17 78.2
MS.gene011859.t1 MTR_6g011230 39.000 100 60 1 7 106 10 108 2.46e-17 77.4
MS.gene011859.t1 MTR_4g107450 40.594 101 59 1 9 109 11 110 3.58e-17 78.6
MS.gene011859.t1 MTR_5g080470 40.000 95 55 2 9 102 8 101 7.33e-17 75.9
MS.gene011859.t1 MTR_2g100020 34.314 102 66 1 9 110 20 120 4.80e-14 69.7
MS.gene011859.t1 MTR_8g017090 35.644 101 57 2 9 109 13 105 6.26e-14 69.7
MS.gene011859.t1 MTR_4g088035 39.241 79 47 1 9 87 7 84 1.22e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011859.t1 AT5G66870 49.606 127 62 2 8 134 7 131 7.16e-35 126
MS.gene011859.t1 AT2G23660 51.351 111 53 1 8 118 5 114 5.52e-34 124
MS.gene011859.t1 AT2G23660 51.351 111 53 1 8 118 5 114 5.52e-34 124
MS.gene011859.t1 AT2G23660 51.351 111 53 1 8 118 5 114 5.52e-34 124
MS.gene011859.t1 AT1G16530 50.000 104 52 0 6 109 12 115 1.15e-31 114
MS.gene011859.t1 AT2G30130 50.000 102 50 1 8 109 8 108 7.76e-30 110
MS.gene011859.t1 AT1G07900 48.113 106 54 1 5 110 30 134 1.34e-29 109
MS.gene011859.t1 AT5G63090 48.571 105 53 1 8 112 11 114 4.35e-29 107
MS.gene011859.t1 AT5G63090 48.571 105 53 1 8 112 11 114 4.35e-29 107
MS.gene011859.t1 AT5G63090 48.571 105 53 1 8 112 11 114 4.35e-29 107
MS.gene011859.t1 AT5G63090 48.571 105 53 1 8 112 11 114 4.35e-29 107
MS.gene011859.t1 AT3G27650 48.571 105 53 1 8 112 39 142 5.57e-29 106
MS.gene011859.t1 AT2G28500 47.170 106 55 1 5 110 52 156 6.37e-29 108
MS.gene011859.t1 AT2G40470 47.244 127 64 2 6 130 18 143 2.07e-28 106
MS.gene011859.t1 AT2G30340 48.598 107 54 1 6 112 51 156 2.40e-28 108
MS.gene011859.t1 AT2G30340 48.598 107 54 1 6 112 50 155 2.99e-28 107
MS.gene011859.t1 AT2G40470 47.244 127 64 2 6 130 43 168 5.36e-28 105
MS.gene011859.t1 AT1G65620 54.286 105 47 1 8 112 9 112 8.27e-28 104
MS.gene011859.t1 AT1G65620 54.286 105 47 1 8 112 9 112 8.27e-28 104
MS.gene011859.t1 AT1G65620 54.286 105 47 1 8 112 9 112 8.27e-28 104
MS.gene011859.t1 AT1G65620 54.286 105 47 1 8 112 9 112 8.27e-28 104
MS.gene011859.t1 AT1G65620 54.286 105 47 1 8 112 9 112 8.27e-28 104
MS.gene011859.t1 AT1G31320 56.818 88 37 1 8 95 13 99 2.11e-27 103
MS.gene011859.t1 AT3G26660 43.137 102 57 1 9 110 6 106 6.89e-25 95.1
MS.gene011859.t1 AT3G26620 43.137 102 57 1 9 110 6 106 8.18e-25 94.7
MS.gene011859.t1 AT3G11090 45.192 104 56 1 9 112 12 114 3.14e-23 92.0
MS.gene011859.t1 AT3G50510 41.818 110 63 1 3 112 7 115 3.16e-23 92.8
MS.gene011859.t1 AT3G50510 41.818 110 63 1 3 112 7 115 3.16e-23 92.8
MS.gene011859.t1 AT4G00210 45.192 104 55 2 8 110 11 113 1.11e-20 86.7
MS.gene011859.t1 AT3G03760 43.689 103 56 2 8 109 51 152 2.06e-20 87.0
MS.gene011859.t1 AT3G47870 39.423 104 62 1 9 112 37 139 2.79e-20 87.4
MS.gene011859.t1 AT2G42430 39.623 106 62 2 8 112 15 119 3.99e-19 83.2
MS.gene011859.t1 AT3G58190 42.157 102 57 2 8 108 11 111 8.39e-19 81.6
MS.gene011859.t1 AT2G42440 36.066 122 75 3 8 128 7 126 2.24e-18 80.9
MS.gene011859.t1 AT2G45410 38.732 142 63 5 11 151 19 137 2.30e-17 77.4
MS.gene011859.t1 AT5G35900 35.238 105 67 1 9 113 6 109 5.61e-17 76.6
MS.gene011859.t1 AT4G00220 40.594 101 58 2 11 110 20 119 4.61e-16 74.3
MS.gene011859.t1 AT1G06280 41.573 89 51 1 8 96 24 111 1.28e-15 72.8
MS.gene011859.t1 AT2G45420 38.235 102 61 2 11 111 40 140 1.37e-15 73.9
MS.gene011859.t1 AT3G13850 33.962 106 69 1 9 114 37 141 1.77e-15 73.6
MS.gene011859.t1 AT1G72980 37.255 102 63 1 8 109 13 113 6.01e-15 71.2
MS.gene011859.t1 AT5G06080 35.849 106 66 2 8 112 7 111 1.30e-14 69.7
MS.gene011859.t1 AT2G31310 34.286 105 67 2 8 111 7 110 1.22e-13 67.0

Find 56 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTTGAGGGACAATGTTTA+TGG 0.185300 8.2:+26260210 MS.gene011859:CDS
TTCAACTATTCTTGTTGATT+TGG 0.272567 8.2:-26260624 None:intergenic
CAAACAAGTCGCTGATTCTT+TGG 0.280466 8.2:+26260170 MS.gene011859:CDS
GTCTTGTTCTTGCAATAGTT+TGG 0.290230 8.2:-26260136 None:intergenic
CTGTCCAATCCTGATCGTTT+CGG 0.322703 8.2:+26260348 MS.gene011859:CDS
CGCTGATTCTTTGGTGTATG+AGG 0.387590 8.2:+26260179 MS.gene011859:CDS
CTCTGAAAGAAAAGATTGTT+AGG 0.410113 8.2:+26260451 MS.gene011859:CDS
CTTTCTTGAAAAGACATTGA+AGG 0.413713 8.2:+26260251 MS.gene011859:CDS
AACCTCGTACACTTGGTGTT+TGG 0.420273 8.2:+26260099 MS.gene011859:CDS
CACTTGAATCTGGCAACTGT+TGG 0.457672 8.2:-26260571 None:intergenic
GGTGCAAAGCCGAAACGATC+AGG 0.465489 8.2:-26260357 None:intergenic
AAACGTTGTGGGTTGTCCGC+TGG 0.468485 8.2:-26260075 None:intergenic
TGAGGCCGAGGCACGTTTGA+GGG 0.480357 8.2:+26260197 MS.gene011859:CDS
AACTCTATTGGTGGTGGAGA+GGG 0.485904 8.2:+26260489 MS.gene011859:CDS
CAGTTGCCAGATTCAAGTGC+AGG 0.487850 8.2:+26260575 MS.gene011859:CDS
GGGTTGTCCGCTGGAAAGTA+AGG 0.487972 8.2:-26260066 None:intergenic
GACAATGTTTATGGATGTGT+TGG 0.490676 8.2:+26260219 MS.gene011859:CDS
GACACCAGGATCAACTCTAT+TGG 0.492057 8.2:+26260477 MS.gene011859:CDS
ATAGAGTTGATCCTGGTGTC+GGG 0.493571 8.2:-26260474 None:intergenic
AGAACCTCTTGAATGATCTC+AGG 0.498563 8.2:-26260327 None:intergenic
TGATGCTTGCATGCTGCACA+CGG 0.515414 8.2:-26260006 None:intergenic
CTTGAATGATCTCAGGATCA+AGG 0.520815 8.2:-26260320 None:intergenic
TTCTTTGGTGTATGAGGCCG+AGG 0.523568 8.2:+26260185 MS.gene011859:CDS
AATCAGCGACTTGTTTGCGA+TGG 0.533026 8.2:-26260164 None:intergenic
GGAGCAATGACAGCATCAGC+AGG 0.535576 8.2:-26260528 None:intergenic
ATGAGGCCGAGGCACGTTTG+AGG 0.549695 8.2:+26260196 MS.gene011859:CDS
ACGTTTCAACCTCGTACACT+TGG 0.555564 8.2:+26260092 MS.gene011859:CDS
GTGCTGCCATTGTCAAAAGA+AGG 0.559493 8.2:-26260549 None:intergenic
AGGATCAACTCTATTGGTGG+TGG 0.561679 8.2:+26260483 MS.gene011859:CDS
GTCAACTGATCAAGAGTTGG+CGG 0.563316 8.2:-26260423 None:intergenic
AATAGAGTTGATCCTGGTGT+CGG 0.565929 8.2:-26260475 None:intergenic
CATGCAAGCATCAACGTCGA+AGG 0.568494 8.2:+26260016 MS.gene011859:CDS
ACCAGGATCAACTCTATTGG+TGG 0.570172 8.2:+26260480 MS.gene011859:CDS
TGTACGAGGTTGAAACGTTG+TGG 0.572380 8.2:-26260087 None:intergenic
GGTGGAGAGGGACACCATGT+TGG 0.574626 8.2:+26260501 MS.gene011859:CDS
ATCAGCGACTTGTTTGCGAT+GGG 0.575116 8.2:-26260163 None:intergenic
GTCGTCAACTGATCAAGAGT+TGG 0.576558 8.2:-26260426 None:intergenic
ATTGTCCCTCAAACGTGCCT+CGG 0.577681 8.2:-26260202 None:intergenic
ACCACCAATAGAGTTGATCC+TGG 0.578332 8.2:-26260481 None:intergenic
CAACTCTATTGGTGGTGGAG+AGG 0.582241 8.2:+26260488 MS.gene011859:CDS
TGATCCTGAGATCATTCAAG+AGG 0.583673 8.2:+26260323 MS.gene011859:CDS
AAAGCCGAAACGATCAGGAT+TGG 0.585751 8.2:-26260352 None:intergenic
AGTTGCCAGATTCAAGTGCA+GGG 0.586090 8.2:+26260576 MS.gene011859:CDS
TGTTCAAGATGAACTCAAGA+AGG 0.590687 8.2:+26260275 MS.gene011859:CDS
AGATTGTTAGGCCCGACACC+AGG 0.592815 8.2:+26260463 MS.gene011859:CDS
TCGTACACTTGGTGTTTGGA+AGG 0.594785 8.2:+26260103 MS.gene011859:CDS
GTACGAGGTTGAAACGTTGT+GGG 0.597027 8.2:-26260086 None:intergenic
CCGCTGGAAAGTAAGGAGCT+AGG 0.607576 8.2:-26260059 None:intergenic
CATCAGCAGGAGCACCAACA+TGG 0.625205 8.2:-26260515 None:intergenic
CCTAGCTCCTTACTTTCCAG+CGG 0.652064 8.2:+26260059 MS.gene011859:CDS
GTTGCCAGATTCAAGTGCAG+GGG 0.653891 8.2:+26260577 MS.gene011859:CDS
TTGCCAGATTCAAGTGCAGG+GGG 0.659973 8.2:+26260578 MS.gene011859:CDS
TGAGAAACAAGATTTCCTTG+TGG 0.660079 8.2:-26260396 None:intergenic
TTCCAAACACCAAGTGTACG+AGG 0.663049 8.2:-26260101 None:intergenic
GATGCTTGCATGCTGCACAC+GGG 0.671194 8.2:-26260005 None:intergenic
AGCCCTAATCAAAATCCACA+AGG 0.702653 8.2:+26260381 MS.gene011859:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
CTTTCTTGAAAAGACATTGA+AGG + chr8.2:26260251-26260270 MS.gene011859:CDS 30.0%
! CTCTGAAAGAAAAGATTGTT+AGG + chr8.2:26260451-26260470 MS.gene011859:CDS 30.0%
!! CTTCAATGTCTTTTCAAGAA+AGG - chr8.2:26260253-26260272 None:intergenic 30.0%
!!! TTCCTTGTGGATTTTGATTA+GGG - chr8.2:26260386-26260405 None:intergenic 30.0%
!!! TTTCCTTGTGGATTTTGATT+AGG - chr8.2:26260387-26260406 None:intergenic 30.0%
GACAATGTTTATGGATGTGT+TGG + chr8.2:26260219-26260238 MS.gene011859:CDS 35.0%
TGAGAAACAAGATTTCCTTG+TGG - chr8.2:26260399-26260418 None:intergenic 35.0%
TGTTCAAGATGAACTCAAGA+AGG + chr8.2:26260275-26260294 MS.gene011859:CDS 35.0%
! ATTGCTCCTTCTTTTGACAA+TGG + chr8.2:26260543-26260562 MS.gene011859:CDS 35.0%
! GTCTTGTTCTTGCAATAGTT+TGG - chr8.2:26260139-26260158 None:intergenic 35.0%
AGAACCTCTTGAATGATCTC+AGG - chr8.2:26260330-26260349 None:intergenic 40.0%
AGCCCTAATCAAAATCCACA+AGG + chr8.2:26260381-26260400 MS.gene011859:CDS 40.0%
CGTTTGAGGGACAATGTTTA+TGG + chr8.2:26260210-26260229 MS.gene011859:CDS 40.0%
CTTGAATGATCTCAGGATCA+AGG - chr8.2:26260323-26260342 None:intergenic 40.0%
TGATCCTGAGATCATTCAAG+AGG + chr8.2:26260323-26260342 MS.gene011859:CDS 40.0%
! AATAGAGTTGATCCTGGTGT+CGG - chr8.2:26260478-26260497 None:intergenic 40.0%
!! CAAACAAGTCGCTGATTCTT+TGG + chr8.2:26260170-26260189 MS.gene011859:CDS 40.0%
!!! TGTGGATTTTGATTAGGGCT+TGG - chr8.2:26260381-26260400 None:intergenic 40.0%
AAAGCCGAAACGATCAGGAT+TGG - chr8.2:26260355-26260374 None:intergenic 45.0%
ACCAGGATCAACTCTATTGG+TGG + chr8.2:26260480-26260499 MS.gene011859:CDS 45.0%
ACGTTTCAACCTCGTACACT+TGG + chr8.2:26260092-26260111 MS.gene011859:CDS 45.0%
AGGATCAACTCTATTGGTGG+TGG + chr8.2:26260483-26260502 MS.gene011859:CDS 45.0%
AGTTGCCAGATTCAAGTGCA+GGG + chr8.2:26260576-26260595 MS.gene011859:CDS 45.0%
CACTTGAATCTGGCAACTGT+TGG - chr8.2:26260574-26260593 None:intergenic 45.0%
CTGTCCAATCCTGATCGTTT+CGG + chr8.2:26260348-26260367 MS.gene011859:CDS 45.0%
GACACCAGGATCAACTCTAT+TGG + chr8.2:26260477-26260496 MS.gene011859:CDS 45.0%
GTACGAGGTTGAAACGTTGT+GGG - chr8.2:26260089-26260108 None:intergenic 45.0%
GTCAACTGATCAAGAGTTGG+CGG - chr8.2:26260426-26260445 None:intergenic 45.0%
GTCGTCAACTGATCAAGAGT+TGG - chr8.2:26260429-26260448 None:intergenic 45.0%
GTGCTGCCATTGTCAAAAGA+AGG - chr8.2:26260552-26260571 None:intergenic 45.0%
TGTACGAGGTTGAAACGTTG+TGG - chr8.2:26260090-26260109 None:intergenic 45.0%
TTCCAAACACCAAGTGTACG+AGG - chr8.2:26260104-26260123 None:intergenic 45.0%
! AATCAGCGACTTGTTTGCGA+TGG - chr8.2:26260167-26260186 None:intergenic 45.0%
! ACCACCAATAGAGTTGATCC+TGG - chr8.2:26260484-26260503 None:intergenic 45.0%
! ATAGAGTTGATCCTGGTGTC+GGG - chr8.2:26260477-26260496 None:intergenic 45.0%
! ATCAGCGACTTGTTTGCGAT+GGG - chr8.2:26260166-26260185 None:intergenic 45.0%
!! AACCTCGTACACTTGGTGTT+TGG + chr8.2:26260099-26260118 MS.gene011859:CDS 45.0%
!! AACTCTATTGGTGGTGGAGA+GGG + chr8.2:26260489-26260508 MS.gene011859:CDS 45.0%
!! CGCTGATTCTTTGGTGTATG+AGG + chr8.2:26260179-26260198 MS.gene011859:CDS 45.0%
!! TCGTACACTTGGTGTTTGGA+AGG + chr8.2:26260103-26260122 MS.gene011859:CDS 45.0%
ATTGTCCCTCAAACGTGCCT+CGG - chr8.2:26260205-26260224 None:intergenic 50.0%
CAGTTGCCAGATTCAAGTGC+AGG + chr8.2:26260575-26260594 MS.gene011859:CDS 50.0%
CATGCAAGCATCAACGTCGA+AGG + chr8.2:26260016-26260035 MS.gene011859:CDS 50.0%
CCTAGCTCCTTACTTTCCAG+CGG + chr8.2:26260059-26260078 MS.gene011859:CDS 50.0%
GTTGCCAGATTCAAGTGCAG+GGG + chr8.2:26260577-26260596 MS.gene011859:CDS 50.0%
TGATGCTTGCATGCTGCACA+CGG - chr8.2:26260009-26260028 None:intergenic 50.0%
TTGCCAGATTCAAGTGCAGG+GGG + chr8.2:26260578-26260597 MS.gene011859:CDS 50.0%
! TTCTTTGGTGTATGAGGCCG+AGG + chr8.2:26260185-26260204 MS.gene011859:CDS 50.0%
!! CAACTCTATTGGTGGTGGAG+AGG + chr8.2:26260488-26260507 MS.gene011859:CDS 50.0%
AGATTGTTAGGCCCGACACC+AGG + chr8.2:26260463-26260482 MS.gene011859:CDS 55.0%
CCGCTGGAAAGTAAGGAGCT+AGG - chr8.2:26260062-26260081 None:intergenic 55.0%
GATGCTTGCATGCTGCACAC+GGG - chr8.2:26260008-26260027 None:intergenic 55.0%
GGAGCAATGACAGCATCAGC+AGG - chr8.2:26260531-26260550 None:intergenic 55.0%
GGGTTGTCCGCTGGAAAGTA+AGG - chr8.2:26260069-26260088 None:intergenic 55.0%
GGTGCAAAGCCGAAACGATC+AGG - chr8.2:26260360-26260379 None:intergenic 55.0%
GTTCCCCCTGCACTTGAATC+TGG - chr8.2:26260584-26260603 None:intergenic 55.0%
! AAACGTTGTGGGTTGTCCGC+TGG - chr8.2:26260078-26260097 None:intergenic 55.0%
!! CATCAGCAGGAGCACCAACA+TGG - chr8.2:26260518-26260537 None:intergenic 55.0%
ATGAGGCCGAGGCACGTTTG+AGG + chr8.2:26260196-26260215 MS.gene011859:CDS 60.0%
GGTGGAGAGGGACACCATGT+TGG + chr8.2:26260501-26260520 MS.gene011859:CDS 60.0%
TGAGGCCGAGGCACGTTTGA+GGG + chr8.2:26260197-26260216 MS.gene011859:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 26259985 26260641 26259985 ID=MS.gene011859
chr8.2 mRNA 26259985 26260641 26259985 ID=MS.gene011859.t1;Parent=MS.gene011859
chr8.2 exon 26259985 26260641 26259985 ID=MS.gene011859.t1.exon1;Parent=MS.gene011859.t1
chr8.2 CDS 26259985 26260641 26259985 ID=cds.MS.gene011859.t1;Parent=MS.gene011859.t1
Gene Sequence

>MS.gene011859

ATGGCAGAAGAGATTATTCGCCCGTGTGCAGCATGCAAGCATCAACGTCGAAGGTGCGACGAAACAAGCTGCAACCTAGCTCCTTACTTTCCAGCGGACAACCCACAACGTTTCAACCTCGTACACTTGGTGTTTGGAAGGAGCAAAGTGTCCAAACTATTGCAAGAACAAGACATTTCCCATCGCAAACAAGTCGCTGATTCTTTGGTGTATGAGGCCGAGGCACGTTTGAGGGACAATGTTTATGGATGTGTTGGTTCTGCATCCTTTCTTGAAAAGACATTGAAGGATGTTCAAGATGAACTCAAGAAGGTGAAGAATGAACTGACTAAATACCTTGATCCTGAGATCATTCAAGAGGTTCTGTCCAATCCTGATCGTTTCGGCTTTGCACCAAGCCCTAATCAAAATCCACAAGGAAATCTTGTTTCTCAGCAGCCGCCAACTCTTGATCAGTTGACGACTTCTCTGAAAGAAAAGATTGTTAGGCCCGACACCAGGATCAACTCTATTGGTGGTGGAGAGGGACACCATGTTGGTGCTCCTGCTGATGCTGTCATTGCTCCTTCTTTTGACAATGGCAGCACCAACAGTTGCCAGATTCAAGTGCAGGGGGAACAACAACAAGTTCAGCAACAACCAAATCAACAAGAATAG
Protein sequence

>MS.gene011859.t1

MAEEIIRPCAACKHQRRRCDETSCNLAPYFPADNPQRFNLVHLVFGRSKVSKLLQEQDISHRKQVADSLVYEAEARLRDNVYGCVGSASFLEKTLKDVQDELKKVKNELTKYLDPEIIQEVLSNPDRFGFAPSPNQNPQGNLVSQQPPTLDQLTTSLKEKIVRPDTRINSIGGGEGHHVGAPADAVIAPSFDNGSTNSCQIQVQGEQQQVQQQPNQQE