Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011910.t1 | XP_013446422.1 | 92.9 | 534 | 28 | 2 | 1 | 525 | 1 | 533 | 1.10E-291 | 1011.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011910.t1 | O64827 | 50.6 | 328 | 133 | 8 | 220 | 525 | 1057 | 1377 | 7.2e-79 | 296.2 |
MS.gene011910.t1 | O64827 | 38.7 | 124 | 68 | 2 | 77 | 192 | 420 | 543 | 1.3e-16 | 89.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011910.t1 | A0A072TSH8 | 92.9 | 534 | 28 | 2 | 1 | 525 | 1 | 533 | 7.7e-292 | 1011.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene011910.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011910.t1 | MTR_8g078505 | 92.884 | 534 | 28 | 2 | 1 | 525 | 1 | 533 | 0.0 | 1016 |
MS.gene011910.t1 | MTR_8g078490 | 67.219 | 302 | 84 | 3 | 239 | 525 | 947 | 1248 | 2.48e-130 | 409 |
MS.gene011910.t1 | MTR_8g078490 | 50.000 | 216 | 79 | 5 | 51 | 240 | 374 | 586 | 9.21e-50 | 184 |
MS.gene011910.t1 | MTR_5g018850 | 60.815 | 319 | 103 | 5 | 225 | 525 | 1188 | 1502 | 4.95e-117 | 377 |
MS.gene011910.t1 | MTR_5g018850 | 43.448 | 145 | 75 | 1 | 64 | 201 | 492 | 636 | 1.87e-29 | 124 |
MS.gene011910.t1 | MTR_4g132610 | 64.062 | 320 | 96 | 6 | 223 | 525 | 725 | 1042 | 4.89e-116 | 367 |
MS.gene011910.t1 | MTR_4g132610 | 44.000 | 250 | 105 | 3 | 13 | 240 | 309 | 545 | 7.54e-45 | 170 |
MS.gene011910.t1 | MTR_8g078700 | 58.468 | 248 | 59 | 4 | 6 | 240 | 20 | 236 | 2.43e-78 | 254 |
MS.gene011910.t1 | MTR_4g132670 | 47.239 | 163 | 74 | 2 | 47 | 208 | 167 | 318 | 6.98e-34 | 132 |
MS.gene011910.t1 | MTR_4g132670 | 51.685 | 89 | 39 | 1 | 54 | 138 | 24 | 112 | 6.15e-19 | 89.4 |
MS.gene011910.t1 | MTR_5g013420 | 34.562 | 217 | 102 | 7 | 343 | 525 | 874 | 1084 | 3.53e-28 | 119 |
MS.gene011910.t1 | MTR_5g013420 | 34.562 | 217 | 102 | 7 | 343 | 525 | 874 | 1084 | 4.15e-28 | 119 |
MS.gene011910.t1 | MTR_1g069570 | 37.017 | 181 | 98 | 4 | 361 | 525 | 561 | 741 | 7.76e-28 | 118 |
MS.gene011910.t1 | MTR_4g010830 | 34.884 | 215 | 104 | 7 | 343 | 525 | 765 | 975 | 1.85e-27 | 117 |
MS.gene011910.t1 | MTR_1g080340 | 37.158 | 183 | 96 | 5 | 361 | 525 | 400 | 581 | 7.31e-27 | 115 |
MS.gene011910.t1 | MTR_7g098390 | 37.569 | 181 | 97 | 4 | 361 | 525 | 517 | 697 | 7.49e-27 | 115 |
MS.gene011910.t1 | MTR_7g088370 | 30.195 | 308 | 158 | 14 | 242 | 525 | 426 | 700 | 6.58e-25 | 109 |
MS.gene011910.t1 | MTR_3g011440 | 28.354 | 328 | 167 | 12 | 237 | 525 | 361 | 659 | 1.22e-22 | 102 |
MS.gene011910.t1 | MTR_1g048950 | 29.674 | 337 | 178 | 12 | 204 | 525 | 236 | 528 | 8.87e-22 | 99.4 |
MS.gene011910.t1 | MTR_7g052480 | 32.877 | 219 | 103 | 6 | 346 | 525 | 338 | 551 | 3.16e-21 | 97.4 |
MS.gene011910.t1 | MTR_8g042750 | 27.692 | 325 | 174 | 11 | 235 | 525 | 386 | 683 | 4.32e-21 | 97.4 |
MS.gene011910.t1 | MTR_8g442490 | 35.758 | 165 | 56 | 4 | 68 | 226 | 1 | 121 | 4.74e-20 | 86.7 |
MS.gene011910.t1 | MTR_1g069570 | 40.171 | 117 | 68 | 2 | 361 | 475 | 561 | 677 | 6.11e-20 | 94.0 |
MS.gene011910.t1 | MTR_4g010550 | 30.846 | 201 | 115 | 6 | 343 | 525 | 265 | 459 | 9.90e-19 | 89.4 |
MS.gene011910.t1 | MTR_7g084090 | 26.266 | 316 | 169 | 10 | 248 | 525 | 463 | 752 | 1.44e-18 | 89.7 |
MS.gene011910.t1 | MTR_6g061270 | 31.604 | 212 | 106 | 6 | 351 | 525 | 480 | 689 | 3.18e-18 | 88.6 |
MS.gene011910.t1 | MTR_8g070070 | 28.495 | 186 | 110 | 4 | 343 | 506 | 571 | 755 | 1.39e-17 | 86.7 |
MS.gene011910.t1 | MTR_6g059310 | 31.818 | 176 | 97 | 4 | 359 | 525 | 85 | 246 | 1.51e-17 | 84.3 |
MS.gene011910.t1 | MTR_6g059310 | 31.818 | 176 | 97 | 4 | 359 | 525 | 85 | 246 | 1.65e-17 | 84.3 |
MS.gene011910.t1 | MTR_8g070075 | 26.882 | 186 | 113 | 4 | 343 | 506 | 564 | 748 | 7.18e-17 | 84.3 |
MS.gene011910.t1 | MTR_7g450730 | 31.461 | 178 | 96 | 5 | 355 | 509 | 303 | 477 | 2.13e-16 | 82.4 |
MS.gene011910.t1 | MTR_8g442480 | 51.282 | 78 | 37 | 1 | 95 | 171 | 13 | 90 | 2.41e-16 | 74.7 |
MS.gene011910.t1 | MTR_7g445600 | 32.609 | 138 | 60 | 2 | 379 | 507 | 243 | 356 | 4.40e-16 | 80.1 |
MS.gene011910.t1 | MTR_6g061200 | 30.645 | 248 | 131 | 10 | 298 | 525 | 434 | 660 | 4.67e-16 | 81.6 |
MS.gene011910.t1 | MTR_8g071030 | 25.088 | 283 | 156 | 11 | 249 | 506 | 484 | 735 | 5.74e-16 | 81.6 |
MS.gene011910.t1 | MTR_0071s0100 | 32.530 | 166 | 95 | 4 | 365 | 525 | 191 | 344 | 1.24e-15 | 79.3 |
MS.gene011910.t1 | MTR_3g088625 | 31.579 | 171 | 86 | 5 | 369 | 525 | 1201 | 1354 | 1.73e-15 | 80.5 |
MS.gene011910.t1 | MTR_3g088625 | 31.579 | 171 | 86 | 5 | 369 | 525 | 1307 | 1460 | 1.76e-15 | 80.5 |
MS.gene011910.t1 | MTR_1g098000 | 32.099 | 162 | 96 | 3 | 369 | 525 | 78 | 230 | 2.19e-15 | 79.0 |
MS.gene011910.t1 | MTR_1g098370 | 31.481 | 162 | 97 | 3 | 369 | 525 | 81 | 233 | 1.11e-14 | 77.0 |
MS.gene011910.t1 | MTR_7g445530 | 30.851 | 188 | 88 | 6 | 362 | 507 | 326 | 513 | 4.87e-14 | 75.1 |
MS.gene011910.t1 | MTR_6g044690 | 28.342 | 187 | 95 | 6 | 354 | 509 | 387 | 565 | 5.13e-14 | 75.1 |
MS.gene011910.t1 | MTR_6g043960 | 27.568 | 185 | 99 | 5 | 354 | 509 | 305 | 483 | 7.21e-14 | 74.3 |
MS.gene011910.t1 | MTR_6g027690 | 30.556 | 180 | 101 | 5 | 364 | 525 | 242 | 415 | 1.54e-13 | 73.2 |
MS.gene011910.t1 | MTR_0376s0030 | 27.717 | 184 | 109 | 6 | 346 | 506 | 378 | 560 | 2.51e-13 | 72.8 |
MS.gene011910.t1 | MTR_1g035420 | 27.322 | 183 | 110 | 5 | 346 | 506 | 463 | 644 | 4.19e-13 | 72.4 |
MS.gene011910.t1 | MTR_2g054460 | 27.807 | 187 | 96 | 6 | 354 | 509 | 287 | 465 | 6.19e-13 | 71.2 |
MS.gene011910.t1 | MTR_1g064770 | 50.820 | 61 | 29 | 1 | 361 | 420 | 30 | 90 | 9.62e-13 | 64.7 |
MS.gene011910.t1 | MTR_1g035400 | 41.250 | 80 | 46 | 1 | 346 | 425 | 382 | 460 | 1.50e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011910.t1 | AT2G23740 | 54.392 | 296 | 110 | 6 | 248 | 525 | 1082 | 1370 | 2.89e-86 | 291 |
MS.gene011910.t1 | AT2G23740 | 35.294 | 136 | 80 | 2 | 65 | 192 | 401 | 536 | 6.61e-18 | 88.2 |
MS.gene011910.t1 | AT2G23740 | 54.392 | 296 | 110 | 6 | 248 | 525 | 1089 | 1377 | 4.16e-86 | 290 |
MS.gene011910.t1 | AT2G23740 | 35.294 | 136 | 80 | 2 | 65 | 192 | 408 | 543 | 6.86e-18 | 88.2 |
MS.gene011910.t1 | AT2G23740 | 54.392 | 296 | 110 | 6 | 248 | 525 | 1089 | 1377 | 4.16e-86 | 290 |
MS.gene011910.t1 | AT2G23740 | 35.294 | 136 | 80 | 2 | 65 | 192 | 408 | 543 | 6.86e-18 | 88.2 |
MS.gene011910.t1 | AT2G23740 | 54.392 | 296 | 110 | 6 | 248 | 525 | 1089 | 1377 | 4.16e-86 | 290 |
MS.gene011910.t1 | AT2G23740 | 35.294 | 136 | 80 | 2 | 65 | 192 | 408 | 543 | 6.86e-18 | 88.2 |
MS.gene011910.t1 | AT2G23740 | 58.547 | 234 | 84 | 4 | 248 | 475 | 1089 | 1315 | 5.63e-75 | 258 |
MS.gene011910.t1 | AT2G23740 | 35.294 | 136 | 80 | 2 | 65 | 192 | 408 | 543 | 6.87e-18 | 88.2 |
MS.gene011910.t1 | AT2G23740 | 58.547 | 234 | 84 | 4 | 248 | 475 | 1089 | 1315 | 5.63e-75 | 258 |
MS.gene011910.t1 | AT2G23740 | 35.294 | 136 | 80 | 2 | 65 | 192 | 408 | 543 | 6.87e-18 | 88.2 |
MS.gene011910.t1 | AT3G04380 | 33.921 | 227 | 114 | 9 | 316 | 525 | 223 | 430 | 3.19e-27 | 114 |
MS.gene011910.t1 | AT3G04380 | 33.921 | 227 | 114 | 9 | 316 | 525 | 207 | 414 | 3.86e-27 | 114 |
MS.gene011910.t1 | AT3G04380 | 33.921 | 227 | 114 | 9 | 316 | 525 | 223 | 430 | 3.92e-27 | 114 |
MS.gene011910.t1 | AT3G04380 | 33.921 | 227 | 114 | 9 | 316 | 525 | 250 | 457 | 4.06e-27 | 114 |
MS.gene011910.t1 | AT3G04380 | 33.921 | 227 | 114 | 9 | 316 | 525 | 234 | 441 | 4.16e-27 | 114 |
MS.gene011910.t1 | AT3G04380 | 33.921 | 227 | 114 | 9 | 316 | 525 | 250 | 457 | 4.24e-27 | 114 |
MS.gene011910.t1 | AT1G04050 | 37.430 | 179 | 95 | 5 | 362 | 525 | 438 | 614 | 1.43e-26 | 114 |
MS.gene011910.t1 | AT1G04050 | 37.430 | 179 | 95 | 5 | 362 | 525 | 542 | 718 | 1.68e-26 | 114 |
MS.gene011910.t1 | AT1G04050 | 37.430 | 179 | 95 | 5 | 362 | 525 | 542 | 718 | 1.68e-26 | 114 |
MS.gene011910.t1 | AT1G73100 | 28.615 | 325 | 165 | 13 | 237 | 525 | 371 | 664 | 4.86e-26 | 112 |
MS.gene011910.t1 | AT2G22740 | 31.481 | 216 | 111 | 6 | 343 | 525 | 574 | 785 | 1.15e-23 | 105 |
MS.gene011910.t1 | AT2G22740 | 31.481 | 216 | 111 | 6 | 343 | 525 | 574 | 785 | 1.15e-23 | 105 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 549 | 724 | 3.75e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 549 | 724 | 3.75e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 457 | 632 | 3.97e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 457 | 632 | 3.97e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 457 | 632 | 3.97e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 457 | 632 | 3.97e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 506 | 681 | 4.13e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 506 | 681 | 4.13e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 506 | 681 | 4.13e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 506 | 681 | 4.13e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 526 | 701 | 4.19e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 526 | 701 | 4.19e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 526 | 701 | 4.19e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 526 | 701 | 4.19e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 437 | 612 | 4.30e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 529 | 704 | 4.60e-23 | 103 |
MS.gene011910.t1 | AT5G43990 | 35.912 | 181 | 94 | 6 | 362 | 525 | 529 | 704 | 4.60e-23 | 103 |
MS.gene011910.t1 | AT2G35160 | 32.620 | 187 | 97 | 5 | 355 | 525 | 580 | 753 | 1.54e-21 | 99.0 |
MS.gene011910.t1 | AT2G35160 | 32.620 | 187 | 97 | 5 | 355 | 525 | 616 | 789 | 1.57e-21 | 99.0 |
MS.gene011910.t1 | AT2G35160 | 32.620 | 187 | 97 | 5 | 355 | 525 | 616 | 789 | 1.57e-21 | 99.0 |
MS.gene011910.t1 | AT2G35160 | 32.620 | 187 | 97 | 5 | 355 | 525 | 616 | 789 | 1.57e-21 | 99.0 |
MS.gene011910.t1 | AT2G35160 | 32.620 | 187 | 97 | 5 | 355 | 525 | 616 | 789 | 1.57e-21 | 99.0 |
MS.gene011910.t1 | AT5G13960 | 30.901 | 233 | 118 | 6 | 332 | 525 | 391 | 619 | 1.30e-20 | 95.9 |
MS.gene011910.t1 | AT5G13960 | 30.901 | 233 | 118 | 6 | 332 | 525 | 257 | 485 | 1.69e-20 | 95.1 |
MS.gene011910.t1 | AT3G03750 | 31.183 | 186 | 101 | 4 | 364 | 525 | 169 | 351 | 2.45e-18 | 87.0 |
MS.gene011910.t1 | AT5G04940 | 29.954 | 217 | 113 | 8 | 343 | 525 | 454 | 665 | 6.08e-18 | 87.8 |
MS.gene011910.t1 | AT5G04940 | 29.954 | 217 | 113 | 8 | 343 | 525 | 454 | 665 | 6.08e-18 | 87.8 |
MS.gene011910.t1 | AT1G17770 | 26.220 | 328 | 180 | 13 | 233 | 525 | 388 | 688 | 3.41e-17 | 85.5 |
MS.gene011910.t1 | AT2G33290 | 24.471 | 331 | 195 | 10 | 204 | 506 | 334 | 637 | 7.76e-15 | 77.8 |
MS.gene011910.t1 | AT2G33290 | 24.471 | 331 | 195 | 10 | 204 | 506 | 334 | 637 | 7.76e-15 | 77.8 |
MS.gene011910.t1 | AT2G33290 | 24.471 | 331 | 195 | 10 | 204 | 506 | 334 | 637 | 7.76e-15 | 77.8 |
MS.gene011910.t1 | AT2G33290 | 24.471 | 331 | 195 | 10 | 204 | 506 | 334 | 637 | 7.76e-15 | 77.8 |
MS.gene011910.t1 | AT4G30860 | 31.176 | 170 | 92 | 5 | 365 | 525 | 307 | 460 | 1.21e-14 | 77.0 |
MS.gene011910.t1 | AT1G77300 | 29.240 | 171 | 90 | 5 | 369 | 525 | 1009 | 1162 | 1.45e-14 | 77.8 |
MS.gene011910.t1 | AT1G77300 | 29.240 | 171 | 90 | 5 | 369 | 525 | 1009 | 1162 | 1.61e-14 | 77.4 |
MS.gene011910.t1 | AT4G13460 | 39.286 | 84 | 50 | 1 | 343 | 426 | 451 | 533 | 2.46e-13 | 73.2 |
MS.gene011910.t1 | AT4G13460 | 39.286 | 84 | 50 | 1 | 343 | 426 | 451 | 533 | 2.46e-13 | 73.2 |
MS.gene011910.t1 | AT2G24740 | 29.843 | 191 | 92 | 8 | 371 | 525 | 566 | 750 | 1.68e-12 | 70.5 |
MS.gene011910.t1 | AT1G76710 | 28.313 | 166 | 97 | 3 | 369 | 525 | 72 | 224 | 2.47e-12 | 69.7 |
MS.gene011910.t1 | AT1G76710 | 28.313 | 166 | 97 | 3 | 369 | 525 | 72 | 224 | 2.54e-12 | 69.7 |
MS.gene011910.t1 | AT1G76710 | 28.313 | 166 | 97 | 3 | 369 | 525 | 72 | 224 | 3.13e-12 | 69.3 |
MS.gene011910.t1 | AT1G76710 | 28.313 | 166 | 97 | 3 | 369 | 525 | 72 | 224 | 3.13e-12 | 69.3 |
MS.gene011910.t1 | AT3G59960 | 29.114 | 158 | 89 | 4 | 377 | 525 | 102 | 245 | 1.52e-11 | 65.9 |
MS.gene011910.t1 | AT3G59960 | 29.114 | 158 | 89 | 4 | 377 | 525 | 102 | 245 | 1.52e-11 | 65.9 |
MS.gene011910.t1 | AT3G59960 | 29.114 | 158 | 89 | 4 | 377 | 525 | 102 | 245 | 1.52e-11 | 65.9 |
MS.gene011910.t1 | AT3G59960 | 29.114 | 158 | 89 | 4 | 377 | 525 | 102 | 245 | 1.76e-11 | 65.9 |
MS.gene011910.t1 | AT2G44150 | 30.380 | 158 | 87 | 4 | 377 | 525 | 107 | 250 | 8.38e-11 | 64.3 |
MS.gene011910.t1 | AT3G03750 | 27.473 | 182 | 97 | 5 | 364 | 525 | 169 | 335 | 9.09e-11 | 63.9 |
Find 103 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGAAGAAAAGGACATATT+TGG | 0.136959 | 8.2:+26972062 | MS.gene011910:CDS |
GGCGAAATGCTCAAGCTTTC+TGG | 0.183364 | 8.2:+26971412 | MS.gene011910:CDS |
TTGATCTCCAATGGACTTTC+CGG | 0.248032 | 8.2:-26971337 | None:intergenic |
CGAATATGATATATCGAAAA+TGG | 0.248933 | 8.2:+26970817 | MS.gene011910:CDS |
ATGAAGAAAAGGACATATTT+GGG | 0.300996 | 8.2:+26972063 | MS.gene011910:CDS |
GAACGGAGTTCGTGTTAAAT+TGG | 0.304027 | 8.2:+26972466 | MS.gene011910:CDS |
AGTCCATGCAAATCAGGTTC+TGG | 0.321251 | 8.2:-26971300 | None:intergenic |
CCGTTCTGCAATATTCTGTT+TGG | 0.323633 | 8.2:-26972449 | None:intergenic |
TATACGTGATCACACGTTTC+AGG | 0.337540 | 8.2:-26972032 | None:intergenic |
TGTGGAGGTACAACTGGTTC+TGG | 0.365849 | 8.2:+26971142 | MS.gene011910:CDS |
TGTAAATGGTCGAATCATAT+TGG | 0.379997 | 8.2:+26972115 | MS.gene011910:CDS |
AGGTTCGCATACGATGTAAA+TGG | 0.389210 | 8.2:+26972101 | MS.gene011910:CDS |
CCCATTTGTGGAGGTACAAC+TGG | 0.389596 | 8.2:+26971136 | MS.gene011910:CDS |
TGTACGACGGTTTGAATTTG+AGG | 0.401657 | 8.2:-26971242 | None:intergenic |
GGACTTGGTGTTGGCACATC+CGG | 0.404270 | 8.2:+26971318 | MS.gene011910:CDS |
ATTCACAGGGATTCGGAGTA+AGG | 0.405434 | 8.2:+26972585 | MS.gene011910:intron |
ACCAGTTGTACCTCCACAAA+TGG | 0.405601 | 8.2:-26971137 | None:intergenic |
TATGAGCCTGTGCTCGTAGA+AGG | 0.406674 | 8.2:+26973536 | MS.gene011910:CDS |
TTCTTTGCAAAGAACATCTC+AGG | 0.407939 | 8.2:+26971391 | MS.gene011910:CDS |
TGATAATGAGAATGCTGTTA+AGG | 0.413807 | 8.2:+26971462 | MS.gene011910:CDS |
TATGCGAACCTTCCGGCCAT+TGG | 0.417185 | 8.2:-26972089 | None:intergenic |
TACATCGTATGCGAACCTTC+CGG | 0.420636 | 8.2:-26972096 | None:intergenic |
ACACCAAGTCCATGCAAATC+AGG | 0.422391 | 8.2:-26971306 | None:intergenic |
TGTCTAGGTTCATCAATAAC+AGG | 0.425670 | 8.2:+26972899 | MS.gene011910:CDS |
TTATCTGATTCACAGGGATT+CGG | 0.425686 | 8.2:+26972578 | MS.gene011910:intron |
TAGTAGAATCAATGACATAT+CGG | 0.427363 | 8.2:-26972864 | None:intergenic |
GAAGGATATCCTTGTCTTTG+TGG | 0.428480 | 8.2:+26973554 | MS.gene011910:CDS |
GCAAGCTAAGTGAATCCCTT+TGG | 0.435509 | 8.2:-26970892 | None:intergenic |
ATCAAGGCCTGTGGATGAAA+TGG | 0.435866 | 8.2:+26970955 | MS.gene011910:CDS |
CTGCAATATTCTGTTTGGAC+AGG | 0.439001 | 8.2:-26972444 | None:intergenic |
GTAAACATCTCCCAAGGCTT+AGG | 0.442228 | 8.2:-26971622 | None:intergenic |
GTCCATGCAAATCAGGTTCT+GGG | 0.452226 | 8.2:-26971299 | None:intergenic |
GTCATTGATTCTACTACATA+TGG | 0.457853 | 8.2:+26972871 | MS.gene011910:CDS |
CTTCGACCAATCTACTCATA+TGG | 0.464079 | 8.2:-26972834 | None:intergenic |
GACGGTTTGAATTTGAGGTC+TGG | 0.466441 | 8.2:-26971237 | None:intergenic |
TGAATAGCCATTTCATCCAC+AGG | 0.471451 | 8.2:-26970962 | None:intergenic |
TTGATTCTGCCGCAAAGCTT+AGG | 0.472145 | 8.2:-26971528 | None:intergenic |
AGTAGAATCAATGACATATC+GGG | 0.477925 | 8.2:-26972863 | None:intergenic |
ATGCAATGACCTAAGCTTTG+CGG | 0.481210 | 8.2:+26971519 | MS.gene011910:CDS |
GAACCTGATTTGCATGGACT+TGG | 0.484117 | 8.2:+26971303 | MS.gene011910:CDS |
CATTGTCGATCCTTGGTACC+AGG | 0.488120 | 8.2:-26970998 | None:intergenic |
CTACGCAATTGATGAAGAAT+CGG | 0.488801 | 8.2:-26971658 | None:intergenic |
ATGTATATCTTCCTAAGCCT+TGG | 0.489667 | 8.2:+26971611 | MS.gene011910:CDS |
TGTATATCTTCCTAAGCCTT+GGG | 0.489888 | 8.2:+26971612 | MS.gene011910:CDS |
GAGATGTTCTTTGCAAAGAA+AGG | 0.490990 | 8.2:-26971388 | None:intergenic |
TGCTCGACATTGTCGATCCT+TGG | 0.497731 | 8.2:-26971005 | None:intergenic |
CTACATATGGCAATGTGTCT+AGG | 0.499868 | 8.2:+26972884 | MS.gene011910:CDS |
GATTGTAAGCATACACATAT+CGG | 0.502921 | 8.2:+26973320 | MS.gene011910:CDS |
TGTAAGTATCGTTCCCGTCC+TGG | 0.503749 | 8.2:+26971172 | MS.gene011910:CDS |
TGCTAACCATATGAGTAGAT+TGG | 0.507042 | 8.2:+26972828 | MS.gene011910:CDS |
CATTGGCACAAAGCCGAGAC+GGG | 0.509657 | 8.2:+26971214 | MS.gene011910:CDS |
GATTTGCATGGACTTGGTGT+TGG | 0.512745 | 8.2:+26971309 | MS.gene011910:CDS |
AAAGTAAGCACTCCCATTTG+TGG | 0.515955 | 8.2:+26971124 | MS.gene011910:CDS |
AAAATTAGGGTCGTCGCGAA+AGG | 0.515962 | 8.2:+26971486 | MS.gene011910:CDS |
GATATGTGTAGTAGATCTAC+AGG | 0.516936 | 8.2:+26971558 | MS.gene011910:CDS |
CGGAGTTCGTGTTAAATTGG+AGG | 0.527617 | 8.2:+26972469 | MS.gene011910:CDS |
GTATATATTGCTACCAATTG+TGG | 0.528485 | 8.2:-26971062 | None:intergenic |
CAAACCGTCGTACATTAAAG+AGG | 0.536529 | 8.2:+26971251 | MS.gene011910:CDS |
GACACTGGATTGATCTCCAA+TGG | 0.537726 | 8.2:-26971346 | None:intergenic |
CAGTGTGTGAGAACCACAAT+TGG | 0.538082 | 8.2:+26971049 | MS.gene011910:CDS |
ATTTGAGGTCTGGCCCGTCT+CGG | 0.538631 | 8.2:-26971227 | None:intergenic |
GGCACATCCGGAAAGTCCAT+TGG | 0.540615 | 8.2:+26971330 | MS.gene011910:CDS |
CAGGGATTCGGAGTAAGGGC+TGG | 0.542170 | 8.2:+26972590 | MS.gene011910:intron |
CCAGTTGTACCTCCACAAAT+GGG | 0.544157 | 8.2:-26971136 | None:intergenic |
GGTCTTTATGACAGAGAGAA+AGG | 0.546322 | 8.2:+26972490 | MS.gene011910:CDS |
CAGAGTTATTGTAGAGGGCA+CGG | 0.549634 | 8.2:+26973298 | MS.gene011910:intron |
ATTTGTAGAACCTGGTACCA+AGG | 0.559017 | 8.2:+26970988 | MS.gene011910:CDS |
AAGAATCGGCTTTGTCACAT+AGG | 0.562883 | 8.2:-26971644 | None:intergenic |
GTCTGATATAGAAAACCAAA+GGG | 0.569533 | 8.2:+26970877 | MS.gene011910:CDS |
ATTCAAATATTTGTAGAACC+TGG | 0.571965 | 8.2:+26970980 | MS.gene011910:CDS |
TTCCCAGAACCTGATTTGCA+TGG | 0.573567 | 8.2:+26971297 | MS.gene011910:CDS |
ACATTGGCACAAAGCCGAGA+CGG | 0.573840 | 8.2:+26971213 | MS.gene011910:CDS |
ATTGCGTAGTCTTGATTCTG+AGG | 0.575859 | 8.2:+26971672 | MS.gene011910:CDS |
AGTCTGATATAGAAAACCAA+AGG | 0.577396 | 8.2:+26970876 | MS.gene011910:CDS |
ATAGCAGTGGAACAGTATCA+AGG | 0.585597 | 8.2:+26970939 | MS.gene011910:CDS |
CTTTCCTCTTTAATGTACGA+CGG | 0.585682 | 8.2:-26971255 | None:intergenic |
ACATCATTGATGACTGACAC+TGG | 0.591159 | 8.2:-26971361 | None:intergenic |
TTCACAGGGATTCGGAGTAA+GGG | 0.591817 | 8.2:+26972586 | MS.gene011910:intron |
GGATATCCTTCTACGAGCAC+AGG | 0.594050 | 8.2:-26973542 | None:intergenic |
AAATGGTCGAATCATATTGG+AGG | 0.599006 | 8.2:+26972118 | MS.gene011910:CDS |
TGTGGATCTTTGAAATGCTG+AGG | 0.600856 | 8.2:+26973572 | MS.gene011910:CDS |
TTGGGAAACCAATGGCCGGA+AGG | 0.605290 | 8.2:+26972081 | MS.gene011910:CDS |
CATATGTCAAAGACAAGGGA+AGG | 0.609395 | 8.2:+26971026 | MS.gene011910:CDS |
GATTACAGAGTTATTGTAGA+GGG | 0.611271 | 8.2:+26973293 | MS.gene011910:intron |
ATATTTGGGAAACCAATGGC+CGG | 0.622843 | 8.2:+26972077 | MS.gene011910:CDS |
GGACATATTTGGGAAACCAA+TGG | 0.633831 | 8.2:+26972073 | MS.gene011910:CDS |
GAAATGATCTCGTATAGCAG+TGG | 0.636945 | 8.2:+26970926 | MS.gene011910:CDS |
AGATCTACTACACATATCAC+AGG | 0.638786 | 8.2:-26971553 | None:intergenic |
TGGAACAGTATCAAGGCCTG+TGG | 0.639274 | 8.2:+26970946 | MS.gene011910:CDS |
TTCAAAGATCCACAAAGACA+AGG | 0.641053 | 8.2:-26973563 | None:intergenic |
AGGCACACAACAGACGCAGA+AGG | 0.646902 | 8.2:+26972675 | MS.gene011910:CDS |
TGATTACAGAGTTATTGTAG+AGG | 0.655560 | 8.2:+26973292 | MS.gene011910:intron |
ACGTTTGTGTGTGAGTACAT+TGG | 0.657919 | 8.2:+26972632 | MS.gene011910:CDS |
GTAGAATCAATGACATATCG+GGG | 0.662628 | 8.2:-26972862 | None:intergenic |
ACATAGGTAAACATCTCCCA+AGG | 0.667902 | 8.2:-26971628 | None:intergenic |
CATATGAGTAGATTGGTCGA+AGG | 0.675409 | 8.2:+26972835 | MS.gene011910:CDS |
TCGAGCATATGTCAAAGACA+AGG | 0.675984 | 8.2:+26971021 | MS.gene011910:CDS |
CGAGCATATGTCAAAGACAA+GGG | 0.676900 | 8.2:+26971022 | MS.gene011910:CDS |
CCAAACAGAATATTGCAGAA+CGG | 0.677454 | 8.2:+26972449 | MS.gene011910:CDS |
AGGAAAGCTGAAGAAAATTG+CGG | 0.686851 | 8.2:+26971271 | MS.gene011910:CDS |
GTAAGCACTCCCATTTGTGG+AGG | 0.692374 | 8.2:+26971127 | MS.gene011910:CDS |
AAAGCTGAAGAAAATTGCGG+TGG | 0.708696 | 8.2:+26971274 | MS.gene011910:CDS |
TTCGAGTGTAACGATAAGTG+CGG | 0.716852 | 8.2:+26972410 | MS.gene011910:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTGTAGTTTACAATTAA+TGG | - | chr8.2:26972154-26972173 | None:intergenic | 15.0% |
!! | ATAGACTACTTTAAACTTAA+CGG | + | chr8.2:26973154-26973173 | MS.gene011910:intron | 20.0% |
!! | GATAAGACAAAAAATTAACA+TGG | + | chr8.2:26972935-26972954 | MS.gene011910:intron | 20.0% |
!! | TGGCATTTAAAAAGAAAAAT+TGG | + | chr8.2:26971883-26971902 | MS.gene011910:intron | 20.0% |
!! | TTGTATTTAACACATTAATC+AGG | - | chr8.2:26973181-26973200 | None:intergenic | 20.0% |
!!! | ATTTTAGCATATTCTTGATA+TGG | - | chr8.2:26972225-26972244 | None:intergenic | 20.0% |
!!! | CTACACATTTAATAACTTTT+TGG | - | chr8.2:26973072-26973091 | None:intergenic | 20.0% |
!!! | GCAATTTGTTCATTTTTAAT+TGG | + | chr8.2:26972959-26972978 | MS.gene011910:intron | 20.0% |
! | AAATTTCTCTACAAAACTTC+AGG | + | chr8.2:26972373-26972392 | MS.gene011910:intron | 25.0% |
! | AATAGCAGGTTAAATATTGT+CGG | - | chr8.2:26971960-26971979 | None:intergenic | 25.0% |
! | AATGCTGTTAAGGAAAAATT+AGG | + | chr8.2:26971472-26971491 | MS.gene011910:CDS | 25.0% |
! | ACCTACAAAATGAATATGTT+AGG | - | chr8.2:26972248-26972267 | None:intergenic | 25.0% |
! | ATGAAGAAAAGGACATATTT+GGG | + | chr8.2:26972063-26972082 | MS.gene011910:CDS | 25.0% |
! | ATGATCAAACTGTAATGATA+CGG | + | chr8.2:26971722-26971741 | MS.gene011910:intron | 25.0% |
! | ATGCTGTTAAGGAAAAATTA+GGG | + | chr8.2:26971473-26971492 | MS.gene011910:CDS | 25.0% |
! | ATTCAAATATTTGTAGAACC+TGG | + | chr8.2:26970980-26970999 | MS.gene011910:CDS | 25.0% |
! | ATTTACAACTAAATGATTGG+TGG | + | chr8.2:26973230-26973249 | MS.gene011910:intron | 25.0% |
! | CGAATATGATATATCGAAAA+TGG | + | chr8.2:26970817-26970836 | MS.gene011910:CDS | 25.0% |
! | GCTATATTTGGTATTAAAAC+AGG | - | chr8.2:26972770-26972789 | None:intergenic | 25.0% |
! | GCTATTTACAACTAAATGAT+TGG | + | chr8.2:26973227-26973246 | MS.gene011910:intron | 25.0% |
! | TAGTAGAATCAATGACATAT+CGG | - | chr8.2:26972867-26972886 | None:intergenic | 25.0% |
! | TGTAAGATGTAAATTCTACT+AGG | - | chr8.2:26972295-26972314 | None:intergenic | 25.0% |
! | TTATTTCCTTGAACATAAGA+TGG | + | chr8.2:26973004-26973023 | MS.gene011910:intron | 25.0% |
!! | ATACCTTTTTGATGAAGAAA+AGG | + | chr8.2:26972052-26972071 | MS.gene011910:CDS | 25.0% |
!! | TCCTAACATATTCATTTTGT+AGG | + | chr8.2:26972244-26972263 | MS.gene011910:intron | 25.0% |
!! | TTTCTTTTTGTAAGAGACAT+TGG | + | chr8.2:26971197-26971216 | MS.gene011910:CDS | 25.0% |
!!! | GCAATTTTCTTTGCTATATT+TGG | - | chr8.2:26972782-26972801 | None:intergenic | 25.0% |
!!! | TAACTAATTTTTTCCAATGC+TGG | + | chr8.2:26972350-26972369 | MS.gene011910:intron | 25.0% |
!!! | TATGTAGTTGTGTTTTGTTA+AGG | + | chr8.2:26971809-26971828 | MS.gene011910:intron | 25.0% |
AACTCTGTAATCACAAGATT+GGG | - | chr8.2:26973285-26973304 | None:intergenic | 30.0% | |
AGTAGAATCAATGACATATC+GGG | - | chr8.2:26972866-26972885 | None:intergenic | 30.0% | |
AGTCTGATATAGAAAACCAA+AGG | + | chr8.2:26970876-26970895 | MS.gene011910:CDS | 30.0% | |
ATAGCAGGTTAAATATTGTC+GGG | - | chr8.2:26971959-26971978 | None:intergenic | 30.0% | |
CTCTTACAAAAAGAAAATCC+AGG | - | chr8.2:26971193-26971212 | None:intergenic | 30.0% | |
GATGAAGAAAAGGACATATT+TGG | + | chr8.2:26972062-26972081 | MS.gene011910:CDS | 30.0% | |
GATTACAGAGTTATTGTAGA+GGG | + | chr8.2:26973293-26973312 | MS.gene011910:intron | 30.0% | |
GATTGTAAGCATACACATAT+CGG | + | chr8.2:26973320-26973339 | MS.gene011910:CDS | 30.0% | |
GTATATATTGCTACCAATTG+TGG | - | chr8.2:26971065-26971084 | None:intergenic | 30.0% | |
GTCTGATATAGAAAACCAAA+GGG | + | chr8.2:26970877-26970896 | MS.gene011910:CDS | 30.0% | |
TAACATATTCAGAACAGCAT+GGG | - | chr8.2:26972185-26972204 | None:intergenic | 30.0% | |
TAACTCTGTAATCACAAGAT+TGG | - | chr8.2:26973286-26973305 | None:intergenic | 30.0% | |
TACAAAAAGAAAATCCAGGA+CGG | - | chr8.2:26971189-26971208 | None:intergenic | 30.0% | |
TCAAAACCATCTTATGTTCA+AGG | - | chr8.2:26973013-26973032 | None:intergenic | 30.0% | |
TGATTACAGAGTTATTGTAG+AGG | + | chr8.2:26973292-26973311 | MS.gene011910:intron | 30.0% | |
TGTAAATGGTCGAATCATAT+TGG | + | chr8.2:26972115-26972134 | MS.gene011910:CDS | 30.0% | |
TTAACATATTCAGAACAGCA+TGG | - | chr8.2:26972186-26972205 | None:intergenic | 30.0% | |
! | ACTCACAAGAATACAGATTT+TGG | + | chr8.2:26971863-26971882 | MS.gene011910:intron | 30.0% |
! | GCAGTAACTTGTAACAATAA+TGG | - | chr8.2:26973421-26973440 | None:intergenic | 30.0% |
! | TGATAATGAGAATGCTGTTA+AGG | + | chr8.2:26971462-26971481 | MS.gene011910:CDS | 30.0% |
! | TGTCCTTTTCTTCATCAAAA+AGG | - | chr8.2:26972058-26972077 | None:intergenic | 30.0% |
!! | GTCATTGATTCTACTACATA+TGG | + | chr8.2:26972871-26972890 | MS.gene011910:CDS | 30.0% |
!! | GTTTTGTTAAGGAGCTAAAT+CGG | + | chr8.2:26971820-26971839 | MS.gene011910:intron | 30.0% |
!! | TTTCTTCCTTTTTACTGACT+TGG | + | chr8.2:26972744-26972763 | MS.gene011910:intron | 30.0% |
!! | TTTTAATTGGCAACATCGTT+AGG | + | chr8.2:26972972-26972991 | MS.gene011910:intron | 30.0% |
AAATGGTCGAATCATATTGG+AGG | + | chr8.2:26972118-26972137 | MS.gene011910:CDS | 35.0% | |
ACAAAAAGAAAATCCAGGAC+GGG | - | chr8.2:26971188-26971207 | None:intergenic | 35.0% | |
AGATCTACTACACATATCAC+AGG | - | chr8.2:26971556-26971575 | None:intergenic | 35.0% | |
AGGAAAGCTGAAGAAAATTG+CGG | + | chr8.2:26971271-26971290 | MS.gene011910:CDS | 35.0% | |
ATGTATATCTTCCTAAGCCT+TGG | + | chr8.2:26971611-26971630 | MS.gene011910:CDS | 35.0% | |
CAAAAGAAGAGATTACGTCT+TGG | - | chr8.2:26972713-26972732 | None:intergenic | 35.0% | |
CCAAACAGAATATTGCAGAA+CGG | + | chr8.2:26972449-26972468 | MS.gene011910:CDS | 35.0% | |
CTACGCAATTGATGAAGAAT+CGG | - | chr8.2:26971661-26971680 | None:intergenic | 35.0% | |
CTTTCCTCTTTAATGTACGA+CGG | - | chr8.2:26971258-26971277 | None:intergenic | 35.0% | |
GAAAAATCACTTCATCCTTG+TGG | + | chr8.2:26971926-26971945 | MS.gene011910:intron | 35.0% | |
GAGATGTTCTTTGCAAAGAA+AGG | - | chr8.2:26971391-26971410 | None:intergenic | 35.0% | |
GATATGTGTAGTAGATCTAC+AGG | + | chr8.2:26971558-26971577 | MS.gene011910:CDS | 35.0% | |
GTAGAATCAATGACATATCG+GGG | - | chr8.2:26972865-26972884 | None:intergenic | 35.0% | |
TGCTAACCATATGAGTAGAT+TGG | + | chr8.2:26972828-26972847 | MS.gene011910:CDS | 35.0% | |
TGTAGAGAAATTTCCAGCAT+TGG | - | chr8.2:26972366-26972385 | None:intergenic | 35.0% | |
TGTATATCTTCCTAAGCCTT+GGG | + | chr8.2:26971612-26971631 | MS.gene011910:CDS | 35.0% | |
TGTCTAGGTTCATCAATAAC+AGG | + | chr8.2:26972899-26972918 | MS.gene011910:CDS | 35.0% | |
TTATCTGATTCACAGGGATT+CGG | + | chr8.2:26972578-26972597 | MS.gene011910:intron | 35.0% | |
TTCAAAGATCCACAAAGACA+AGG | - | chr8.2:26973566-26973585 | None:intergenic | 35.0% | |
TTCTCTACAAAACTTCAGGA+AGG | + | chr8.2:26972377-26972396 | MS.gene011910:intron | 35.0% | |
TTCTTTGCAAAGAACATCTC+AGG | + | chr8.2:26971391-26971410 | MS.gene011910:CDS | 35.0% | |
!! | ACGTTTGTTATCTGATTCAC+AGG | + | chr8.2:26972571-26972590 | MS.gene011910:intron | 35.0% |
!! | CGTTTGTTATCTGATTCACA+GGG | + | chr8.2:26972572-26972591 | MS.gene011910:intron | 35.0% |
!!! | TAACCTGCTATTTTGTTAGC+AGG | + | chr8.2:26971968-26971987 | MS.gene011910:intron | 35.0% |
AAAGCTGAAGAAAATTGCGG+TGG | + | chr8.2:26971274-26971293 | MS.gene011910:CDS | 40.0% | |
AAAGTAAGCACTCCCATTTG+TGG | + | chr8.2:26971124-26971143 | MS.gene011910:CDS | 40.0% | |
AACAGGCCAAGTCAGTAAAA+AGG | - | chr8.2:26972753-26972772 | None:intergenic | 40.0% | |
ACATAGGTAAACATCTCCCA+AGG | - | chr8.2:26971631-26971650 | None:intergenic | 40.0% | |
ACGTTTGTGTGTGAGTACAT+TGG | + | chr8.2:26972632-26972651 | MS.gene011910:CDS | 40.0% | |
AGGTTCGCATACGATGTAAA+TGG | + | chr8.2:26972101-26972120 | MS.gene011910:CDS | 40.0% | |
ATAGCAGTGGAACAGTATCA+AGG | + | chr8.2:26970939-26970958 | MS.gene011910:CDS | 40.0% | |
ATATTTGGGAAACCAATGGC+CGG | + | chr8.2:26972077-26972096 | MS.gene011910:CDS | 40.0% | |
ATGCAATGACCTAAGCTTTG+CGG | + | chr8.2:26971519-26971538 | MS.gene011910:CDS | 40.0% | |
ATTTGTAGAACCTGGTACCA+AGG | + | chr8.2:26970988-26971007 | MS.gene011910:CDS | 40.0% | |
CAAACCGTCGTACATTAAAG+AGG | + | chr8.2:26971251-26971270 | MS.gene011910:CDS | 40.0% | |
CATATGTCAAAGACAAGGGA+AGG | + | chr8.2:26971026-26971045 | MS.gene011910:CDS | 40.0% | |
CCGTTCTGCAATATTCTGTT+TGG | - | chr8.2:26972452-26972471 | None:intergenic | 40.0% | |
CGAGCATATGTCAAAGACAA+GGG | + | chr8.2:26971022-26971041 | MS.gene011910:CDS | 40.0% | |
CTACATATGGCAATGTGTCT+AGG | + | chr8.2:26972884-26972903 | MS.gene011910:CDS | 40.0% | |
CTGCAATATTCTGTTTGGAC+AGG | - | chr8.2:26972447-26972466 | None:intergenic | 40.0% | |
CTTCGACCAATCTACTCATA+TGG | - | chr8.2:26972837-26972856 | None:intergenic | 40.0% | |
CTTTATGACAGAGAGAAAGG+TGG | + | chr8.2:26972493-26972512 | MS.gene011910:intron | 40.0% | |
GAAATGATCTCGTATAGCAG+TGG | + | chr8.2:26970926-26970945 | MS.gene011910:CDS | 40.0% | |
GAACGGAGTTCGTGTTAAAT+TGG | + | chr8.2:26972466-26972485 | MS.gene011910:CDS | 40.0% | |
GAAGGATATCCTTGTCTTTG+TGG | + | chr8.2:26973554-26973573 | MS.gene011910:CDS | 40.0% | |
GATCCTGCTAACAAAATAGC+AGG | - | chr8.2:26971974-26971993 | None:intergenic | 40.0% | |
GGACATATTTGGGAAACCAA+TGG | + | chr8.2:26972073-26972092 | MS.gene011910:CDS | 40.0% | |
GGTCTTTATGACAGAGAGAA+AGG | + | chr8.2:26972490-26972509 | MS.gene011910:CDS | 40.0% | |
GTGAACAGTTGACATCAGTA+CGG | + | chr8.2:26973447-26973466 | MS.gene011910:intron | 40.0% | |
TATACGTGATCACACGTTTC+AGG | - | chr8.2:26972035-26972054 | None:intergenic | 40.0% | |
TATTCAGAACAGCATGGGTT+AGG | - | chr8.2:26972180-26972199 | None:intergenic | 40.0% | |
TCGAGCATATGTCAAAGACA+AGG | + | chr8.2:26971021-26971040 | MS.gene011910:CDS | 40.0% | |
TGAATAGCCATTTCATCCAC+AGG | - | chr8.2:26970965-26970984 | None:intergenic | 40.0% | |
TGTACGACGGTTTGAATTTG+AGG | - | chr8.2:26971245-26971264 | None:intergenic | 40.0% | |
TTCGAGTGTAACGATAAGTG+CGG | + | chr8.2:26972410-26972429 | MS.gene011910:CDS | 40.0% | |
TTGTCGGGAAAAAAACCACA+AGG | - | chr8.2:26971944-26971963 | None:intergenic | 40.0% | |
! | AAGAATCGGCTTTGTCACAT+AGG | - | chr8.2:26971647-26971666 | None:intergenic | 40.0% |
! | ACATCATTGATGACTGACAC+TGG | - | chr8.2:26971364-26971383 | None:intergenic | 40.0% |
! | ATTCAGAACAGCATGGGTTA+GGG | - | chr8.2:26972179-26972198 | None:intergenic | 40.0% |
! | ATTGCGTAGTCTTGATTCTG+AGG | + | chr8.2:26971672-26971691 | MS.gene011910:CDS | 40.0% |
! | CATATGAGTAGATTGGTCGA+AGG | + | chr8.2:26972835-26972854 | MS.gene011910:CDS | 40.0% |
! | TTGATCTCCAATGGACTTTC+CGG | - | chr8.2:26971340-26971359 | None:intergenic | 40.0% |
AAAATTAGGGTCGTCGCGAA+AGG | + | chr8.2:26971486-26971505 | MS.gene011910:CDS | 45.0% | |
ACACCAAGTCCATGCAAATC+AGG | - | chr8.2:26971309-26971328 | None:intergenic | 45.0% | |
ACCAGTTGTACCTCCACAAA+TGG | - | chr8.2:26971140-26971159 | None:intergenic | 45.0% | |
AGTCCATGCAAATCAGGTTC+TGG | - | chr8.2:26971303-26971322 | None:intergenic | 45.0% | |
ATCAAGGCCTGTGGATGAAA+TGG | + | chr8.2:26970955-26970974 | MS.gene011910:CDS | 45.0% | |
ATTCACAGGGATTCGGAGTA+AGG | + | chr8.2:26972585-26972604 | MS.gene011910:intron | 45.0% | |
CAGAGTTATTGTAGAGGGCA+CGG | + | chr8.2:26973298-26973317 | MS.gene011910:intron | 45.0% | |
CAGTGTGTGAGAACCACAAT+TGG | + | chr8.2:26971049-26971068 | MS.gene011910:CDS | 45.0% | |
CCAGTTGTACCTCCACAAAT+GGG | - | chr8.2:26971139-26971158 | None:intergenic | 45.0% | |
CGGAGTTCGTGTTAAATTGG+AGG | + | chr8.2:26972469-26972488 | MS.gene011910:CDS | 45.0% | |
GACACTGGATTGATCTCCAA+TGG | - | chr8.2:26971349-26971368 | None:intergenic | 45.0% | |
GCAAGCTAAGTGAATCCCTT+TGG | - | chr8.2:26970895-26970914 | None:intergenic | 45.0% | |
GTAAACATCTCCCAAGGCTT+AGG | - | chr8.2:26971625-26971644 | None:intergenic | 45.0% | |
GTCCATGCAAATCAGGTTCT+GGG | - | chr8.2:26971302-26971321 | None:intergenic | 45.0% | |
TACATCGTATGCGAACCTTC+CGG | - | chr8.2:26972099-26972118 | None:intergenic | 45.0% | |
TTCACAGGGATTCGGAGTAA+GGG | + | chr8.2:26972586-26972605 | MS.gene011910:intron | 45.0% | |
TTGATTCTGCCGCAAAGCTT+AGG | - | chr8.2:26971531-26971550 | None:intergenic | 45.0% | |
! | GAACCTGATTTGCATGGACT+TGG | + | chr8.2:26971303-26971322 | MS.gene011910:CDS | 45.0% |
! | GACGGTTTGAATTTGAGGTC+TGG | - | chr8.2:26971240-26971259 | None:intergenic | 45.0% |
! | TTCCCAGAACCTGATTTGCA+TGG | + | chr8.2:26971297-26971316 | MS.gene011910:CDS | 45.0% |
!! | GATTTGCATGGACTTGGTGT+TGG | + | chr8.2:26971309-26971328 | MS.gene011910:CDS | 45.0% |
!!! | TGAAGTTTTAGAGCAGCAGG+AGG | + | chr8.2:26972655-26972674 | MS.gene011910:CDS | 45.0% |
!!! | TGGTGAAGTTTTAGAGCAGC+AGG | + | chr8.2:26972652-26972671 | MS.gene011910:CDS | 45.0% |
ACATTGGCACAAAGCCGAGA+CGG | + | chr8.2:26971213-26971232 | MS.gene011910:CDS | 50.0% | |
CATTGTCGATCCTTGGTACC+AGG | - | chr8.2:26971001-26971020 | None:intergenic | 50.0% | |
GGATATCCTTCTACGAGCAC+AGG | - | chr8.2:26973545-26973564 | None:intergenic | 50.0% | |
GGCGAAATGCTCAAGCTTTC+TGG | + | chr8.2:26971412-26971431 | MS.gene011910:CDS | 50.0% | |
GTAAGCACTCCCATTTGTGG+AGG | + | chr8.2:26971127-26971146 | MS.gene011910:CDS | 50.0% | |
TATGAGCCTGTGCTCGTAGA+AGG | + | chr8.2:26973536-26973555 | MS.gene011910:CDS | 50.0% | |
TGCTCGACATTGTCGATCCT+TGG | - | chr8.2:26971008-26971027 | None:intergenic | 50.0% | |
TGGAACAGTATCAAGGCCTG+TGG | + | chr8.2:26970946-26970965 | MS.gene011910:CDS | 50.0% | |
! | CCCATTTGTGGAGGTACAAC+TGG | + | chr8.2:26971136-26971155 | MS.gene011910:CDS | 50.0% |
! | TGTAAGTATCGTTCCCGTCC+TGG | + | chr8.2:26971172-26971191 | MS.gene011910:CDS | 50.0% |
! | TGTGGAGGTACAACTGGTTC+TGG | + | chr8.2:26971142-26971161 | MS.gene011910:CDS | 50.0% |
AGGCACACAACAGACGCAGA+AGG | + | chr8.2:26972675-26972694 | MS.gene011910:CDS | 55.0% | |
CATTGGCACAAAGCCGAGAC+GGG | + | chr8.2:26971214-26971233 | MS.gene011910:CDS | 55.0% | |
GGCACATCCGGAAAGTCCAT+TGG | + | chr8.2:26971330-26971349 | MS.gene011910:CDS | 55.0% | |
TATGCGAACCTTCCGGCCAT+TGG | - | chr8.2:26972092-26972111 | None:intergenic | 55.0% | |
TTGGGAAACCAATGGCCGGA+AGG | + | chr8.2:26972081-26972100 | MS.gene011910:CDS | 55.0% | |
! | ATTTGAGGTCTGGCCCGTCT+CGG | - | chr8.2:26971230-26971249 | None:intergenic | 55.0% |
!! | GCTGGCGAAGCTATTTTGCG+TGG | + | chr8.2:26972608-26972627 | MS.gene011910:CDS | 55.0% |
!! | GGACTTGGTGTTGGCACATC+CGG | + | chr8.2:26971318-26971337 | MS.gene011910:CDS | 55.0% |
CAGGGATTCGGAGTAAGGGC+TGG | + | chr8.2:26972590-26972609 | MS.gene011910:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 26970773 | 26973592 | 26970773 | ID=MS.gene011910 |
chr8.2 | mRNA | 26970773 | 26973592 | 26970773 | ID=MS.gene011910.t1;Parent=MS.gene011910 |
chr8.2 | exon | 26970773 | 26971693 | 26970773 | ID=MS.gene011910.t1.exon1;Parent=MS.gene011910.t1 |
chr8.2 | CDS | 26970773 | 26971693 | 26970773 | ID=cds.MS.gene011910.t1;Parent=MS.gene011910.t1 |
chr8.2 | exon | 26971990 | 26972139 | 26971990 | ID=MS.gene011910.t1.exon2;Parent=MS.gene011910.t1 |
chr8.2 | CDS | 26971990 | 26972139 | 26971990 | ID=cds.MS.gene011910.t1;Parent=MS.gene011910.t1 |
chr8.2 | exon | 26972395 | 26972511 | 26972395 | ID=MS.gene011910.t1.exon3;Parent=MS.gene011910.t1 |
chr8.2 | CDS | 26972395 | 26972511 | 26972395 | ID=cds.MS.gene011910.t1;Parent=MS.gene011910.t1 |
chr8.2 | exon | 26972593 | 26972696 | 26972593 | ID=MS.gene011910.t1.exon4;Parent=MS.gene011910.t1 |
chr8.2 | CDS | 26972593 | 26972696 | 26972593 | ID=cds.MS.gene011910.t1;Parent=MS.gene011910.t1 |
chr8.2 | exon | 26972789 | 26972920 | 26972789 | ID=MS.gene011910.t1.exon5;Parent=MS.gene011910.t1 |
chr8.2 | CDS | 26972789 | 26972920 | 26972789 | ID=cds.MS.gene011910.t1;Parent=MS.gene011910.t1 |
chr8.2 | exon | 26973301 | 26973361 | 26973301 | ID=MS.gene011910.t1.exon6;Parent=MS.gene011910.t1 |
chr8.2 | CDS | 26973301 | 26973361 | 26973301 | ID=cds.MS.gene011910.t1;Parent=MS.gene011910.t1 |
chr8.2 | exon | 26973500 | 26973592 | 26973500 | ID=MS.gene011910.t1.exon7;Parent=MS.gene011910.t1 |
chr8.2 | CDS | 26973500 | 26973592 | 26973500 | ID=cds.MS.gene011910.t1;Parent=MS.gene011910.t1 |
Gene Sequence |
Protein sequence |