Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011915.t1 | XP_003629519.1 | 97.4 | 535 | 10 | 1 | 1 | 535 | 1 | 531 | 3.30E-264 | 920.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011915.t1 | Q8W4F0 | 71.9 | 562 | 122 | 5 | 1 | 535 | 1 | 553 | 1.7e-197 | 690.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011915.t1 | G7LFK8 | 97.4 | 535 | 10 | 1 | 1 | 535 | 1 | 531 | 2.4e-264 | 920.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene011915.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011915.t1 | MTR_8g078410 | 96.449 | 535 | 15 | 1 | 1 | 535 | 1 | 531 | 0.0 | 1070 |
| MS.gene011915.t1 | MTR_5g018900 | 76.119 | 536 | 115 | 5 | 1 | 535 | 1 | 524 | 0.0 | 809 |
| MS.gene011915.t1 | MTR_1g021835 | 57.757 | 535 | 159 | 8 | 1 | 535 | 1 | 468 | 0.0 | 582 |
| MS.gene011915.t1 | MTR_5g081160 | 65.416 | 373 | 119 | 3 | 163 | 535 | 141 | 503 | 2.45e-175 | 504 |
| MS.gene011915.t1 | MTR_3g069410 | 57.047 | 447 | 172 | 6 | 105 | 535 | 70 | 512 | 5.89e-166 | 481 |
| MS.gene011915.t1 | MTR_1g021835 | 56.840 | 424 | 124 | 7 | 1 | 424 | 1 | 365 | 7.10e-159 | 459 |
| MS.gene011915.t1 | MTR_1g021835 | 54.011 | 374 | 114 | 6 | 1 | 371 | 1 | 319 | 1.27e-129 | 380 |
| MS.gene011915.t1 | MTR_5g018910 | 63.441 | 93 | 33 | 1 | 156 | 247 | 488 | 580 | 1.47e-34 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011915.t1 | AT4G36860 | 68.149 | 562 | 143 | 5 | 1 | 535 | 1 | 553 | 0.0 | 734 |
| MS.gene011915.t1 | AT4G36860 | 65.470 | 585 | 144 | 5 | 1 | 535 | 1 | 577 | 0.0 | 725 |
| MS.gene011915.t1 | AT4G36860 | 66.741 | 451 | 120 | 4 | 1 | 424 | 1 | 448 | 0.0 | 586 |
| MS.gene011915.t1 | AT1G19270 | 53.097 | 565 | 201 | 8 | 1 | 535 | 1 | 531 | 0.0 | 573 |
| MS.gene011915.t1 | AT1G19270 | 53.097 | 565 | 201 | 8 | 1 | 535 | 1 | 531 | 0.0 | 573 |
| MS.gene011915.t1 | AT2G39830 | 59.020 | 449 | 155 | 7 | 111 | 535 | 75 | 518 | 0.0 | 521 |
| MS.gene011915.t1 | AT2G39830 | 66.220 | 373 | 121 | 3 | 163 | 535 | 160 | 527 | 1.38e-179 | 516 |
| MS.gene011915.t1 | AT2G39830 | 65.691 | 376 | 121 | 4 | 163 | 535 | 160 | 530 | 2.77e-177 | 510 |
| MS.gene011915.t1 | AT5G66610 | 44.444 | 513 | 248 | 11 | 28 | 529 | 65 | 551 | 4.01e-134 | 401 |
| MS.gene011915.t1 | AT2G39830 | 65.233 | 279 | 94 | 3 | 163 | 440 | 160 | 436 | 4.94e-133 | 394 |
| MS.gene011915.t1 | AT5G66610 | 48.826 | 426 | 196 | 8 | 111 | 529 | 14 | 424 | 8.04e-131 | 388 |
| MS.gene011915.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 170 | 640 | 7.56e-129 | 390 |
| MS.gene011915.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 161 | 631 | 8.88e-129 | 390 |
| MS.gene011915.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 161 | 631 | 8.88e-129 | 390 |
| MS.gene011915.t1 | AT5G66610 | 42.222 | 540 | 248 | 12 | 28 | 529 | 65 | 578 | 5.62e-128 | 386 |
| MS.gene011915.t1 | AT5G17890 | 51.309 | 382 | 174 | 6 | 159 | 535 | 1234 | 1608 | 1.81e-112 | 366 |
| MS.gene011915.t1 | AT5G66630 | 47.989 | 373 | 176 | 7 | 159 | 528 | 341 | 698 | 4.96e-109 | 341 |
| MS.gene011915.t1 | AT5G66640 | 40.272 | 514 | 236 | 18 | 33 | 528 | 10 | 470 | 1.89e-100 | 311 |
| MS.gene011915.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 89 | 438 | 1.90e-100 | 311 |
| MS.gene011915.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 89 | 438 | 1.90e-100 | 311 |
| MS.gene011915.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 120 | 469 | 4.87e-100 | 311 |
| MS.gene011915.t1 | AT5G66640 | 49.691 | 324 | 154 | 7 | 212 | 528 | 10 | 331 | 5.85e-96 | 295 |
| MS.gene011915.t1 | AT5G66640 | 36.965 | 514 | 249 | 19 | 33 | 528 | 10 | 466 | 3.16e-83 | 267 |
| MS.gene011915.t1 | AT5G66640 | 43.220 | 354 | 186 | 9 | 182 | 528 | 120 | 465 | 5.46e-83 | 266 |
| MS.gene011915.t1 | AT5G66620 | 38.810 | 353 | 191 | 10 | 44 | 390 | 161 | 494 | 1.19e-72 | 240 |
Find 119 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCTTATAGCATAATTTA+TGG | 0.189171 | 8.2:-27053760 | None:intergenic |
| ATCCTCGTCCTGAATGTTTA+TGG | 0.190323 | 8.2:-27052371 | None:intergenic |
| AGTATAGAGCACATCCTTTC+TGG | 0.193526 | 8.2:+27054356 | MS.gene011915:CDS |
| CATGCTTGGCTTAGACTTAA+AGG | 0.236159 | 8.2:+27055502 | MS.gene011915:CDS |
| GTGTCTCGATTCGGCTATTA+TGG | 0.241072 | 8.2:+27054621 | MS.gene011915:CDS |
| AACCAGGCAGTGCTCAAGTA+TGG | 0.287660 | 8.2:+27055879 | MS.gene011915:CDS |
| CATATTCCTTCTTCAACTTC+AGG | 0.292654 | 8.2:-27055630 | None:intergenic |
| CGAGGATACACCGGGAAATA+TGG | 0.299410 | 8.2:+27052387 | MS.gene011915:CDS |
| CATCGGCGTATCAGCCTAAA+AGG | 0.301540 | 8.2:-27055141 | None:intergenic |
| GTCCTCTGGTTTCAGGTAAA+TGG | 0.302701 | 8.2:-27054918 | None:intergenic |
| AAGCAAAGTCCTCTGGTTTC+AGG | 0.302816 | 8.2:-27054925 | None:intergenic |
| GCAGCAAATTCCTATGCTTT+TGG | 0.308444 | 8.2:+27054714 | MS.gene011915:CDS |
| AACTTCCGGTCATTCGGATA+TGG | 0.336770 | 8.2:-27055920 | None:intergenic |
| TCATTACAGTATTCCATGTC+TGG | 0.337779 | 8.2:+27053725 | MS.gene011915:intron |
| GGCGAAAAGAGGTTTGTAAA+AGG | 0.349058 | 8.2:-27053154 | None:intergenic |
| ACCAAGTTCCTTCTCAAAAT+CGG | 0.357058 | 8.2:-27055790 | None:intergenic |
| TGATGATGCTTCTTCACTTC+CGG | 0.357113 | 8.2:-27055700 | None:intergenic |
| TTACCATAAATTATGCTATA+AGG | 0.387755 | 8.2:+27053757 | MS.gene011915:CDS |
| GTTCGAACCCTTTAGAAACT+TGG | 0.408812 | 8.2:-27052349 | None:intergenic |
| TGCTTCTTCACTTCCGGAGC+CGG | 0.411249 | 8.2:-27055694 | None:intergenic |
| TTAGATTCAGAGATCTATTC+CGG | 0.411303 | 8.2:+27055675 | MS.gene011915:CDS |
| GGTTCGAACCATAAACATTC+AGG | 0.417018 | 8.2:+27052363 | MS.gene011915:CDS |
| CTGGCTTACCAAGTTTCTAA+AGG | 0.419265 | 8.2:+27052341 | MS.gene011915:CDS |
| GTTACAGAGGAAGATCATAA+AGG | 0.421978 | 8.2:+27052618 | MS.gene011915:CDS |
| GTGAGCTATCTGTCTCAATC+TGG | 0.433359 | 8.2:-27055827 | None:intergenic |
| ATGGAAAACTTCCGGTCATT+CGG | 0.433899 | 8.2:-27055926 | None:intergenic |
| TCGCATAGTTACCTGTATAC+AGG | 0.438440 | 8.2:-27053175 | None:intergenic |
| GCTGGCTGCAATGCCGAGAT+TGG | 0.442433 | 8.2:+27053455 | MS.gene011915:CDS |
| TTCTGACAAGCAAAGTCCTC+TGG | 0.446916 | 8.2:-27054932 | None:intergenic |
| TGGCTTACCAAGTTTCTAAA+GGG | 0.451933 | 8.2:+27052342 | MS.gene011915:CDS |
| TTACAGAGGAAGATCATAAA+GGG | 0.469977 | 8.2:+27052619 | MS.gene011915:CDS |
| GAAAATAAGATTGTATGGGC+TGG | 0.473993 | 8.2:+27052322 | None:intergenic |
| ATTTCATTATGGAAAACTTC+CGG | 0.475409 | 8.2:-27055934 | None:intergenic |
| TTCCTCTACATCTTCAAAGA+AGG | 0.477132 | 8.2:+27055758 | MS.gene011915:CDS |
| CGAACCTCGTAATCAGTGAT+TGG | 0.478079 | 8.2:-27053551 | None:intergenic |
| CATCTTCAAAGAAGGGTAAA+CGG | 0.478692 | 8.2:+27055766 | MS.gene011915:CDS |
| AGGAAGATGAACAACTTGCC+AGG | 0.481242 | 8.2:+27053068 | MS.gene011915:CDS |
| CTCATGAAATGATGCATGCT+TGG | 0.482818 | 8.2:+27055488 | MS.gene011915:CDS |
| TGATTGGAAGTTTGCAAGCA+TGG | 0.482821 | 8.2:-27053535 | None:intergenic |
| CAAACTTTCTTGAATTGCCC+TGG | 0.485539 | 8.2:-27053086 | None:intergenic |
| CCATGTTGCTAAAATTCAAC+AGG | 0.488050 | 8.2:+27053012 | MS.gene011915:CDS |
| CGGTAGCCTGCTCCTATACT+TGG | 0.493239 | 8.2:-27055096 | None:intergenic |
| GTATTTCAAGATAGAGAGGT+TGG | 0.497395 | 8.2:-27054657 | None:intergenic |
| TCAGAGATCTATTCCGGCTC+CGG | 0.497689 | 8.2:+27055681 | MS.gene011915:CDS |
| TGAGTTGCATGGGAGCTGTA+TGG | 0.499390 | 8.2:+27053492 | MS.gene011915:CDS |
| TTATAGCATAATTTATGGTA+AGG | 0.500224 | 8.2:-27053755 | None:intergenic |
| TCTGTCGTGTCCATATTTCC+CGG | 0.502358 | 8.2:-27052397 | None:intergenic |
| ACAGATAGCTCACCAGCCTA+TGG | 0.509351 | 8.2:+27055837 | MS.gene011915:CDS |
| GTGTCTTGAGTGTCTCGATT+CGG | 0.509709 | 8.2:+27054612 | MS.gene011915:CDS |
| GCCCATACTTGAGCACTGCC+TGG | 0.512523 | 8.2:-27055881 | None:intergenic |
| ATATGGACACGACAGAGATT+CGG | 0.513953 | 8.2:+27052404 | MS.gene011915:CDS |
| TTGTTGTAGCTGTCAGAGAA+TGG | 0.516123 | 8.2:+27054423 | MS.gene011915:CDS |
| TATATTTATAGGTTACTGAC+AGG | 0.516589 | 8.2:+27055454 | MS.gene011915:intron |
| CAGATCCCACAAAATTCAGC+TGG | 0.520653 | 8.2:+27054325 | MS.gene011915:intron |
| TGGATTCAGAGAGGGTAACC+AGG | 0.522998 | 8.2:+27055863 | MS.gene011915:CDS |
| CATTACAGTATTCCATGTCT+GGG | 0.527623 | 8.2:+27053726 | MS.gene011915:intron |
| CTGAATCCATCTCCATAGGC+TGG | 0.528141 | 8.2:-27055849 | None:intergenic |
| CTGAGGCCTGAAGTTGAAGA+AGG | 0.530645 | 8.2:+27055624 | MS.gene011915:CDS |
| AAACCTTCCATGGCCAATCT+CGG | 0.530954 | 8.2:-27053468 | None:intergenic |
| AGGAGACCAAGTATAGGAGC+AGG | 0.531668 | 8.2:+27055090 | MS.gene011915:CDS |
| AGCTCACCAGCCTATGGAGA+TGG | 0.537937 | 8.2:+27055843 | MS.gene011915:CDS |
| CATGCATCATTTCATGAGCT+AGG | 0.540468 | 8.2:-27055483 | None:intergenic |
| ACCTGTATACAGGCGAAAAG+AGG | 0.540632 | 8.2:-27053165 | None:intergenic |
| TCTTGCAAACATCACACCTT+GGG | 0.542837 | 8.2:-27053790 | None:intergenic |
| TGCTCAAGTATGGGCTTAGA+CGG | 0.544906 | 8.2:+27055889 | MS.gene011915:CDS |
| GTACCATCGCGTTCGTGTGA+TGG | 0.547829 | 8.2:-27054394 | None:intergenic |
| CATTCAGGACGAGGATACAC+CGG | 0.549451 | 8.2:+27052378 | MS.gene011915:CDS |
| AGAAGGAATATGCCAAGTCT+TGG | 0.551472 | 8.2:+27055641 | MS.gene011915:CDS |
| ACCACATATGAGCCAAGACT+TGG | 0.555232 | 8.2:-27055653 | None:intergenic |
| GCTGATGTTGAACAAAATGA+AGG | 0.556484 | 8.2:+27052986 | MS.gene011915:CDS |
| ATGCCGAGATTGGCCATGGA+AGG | 0.556967 | 8.2:+27053465 | MS.gene011915:CDS |
| ACCAGGCAGTGCTCAAGTAT+GGG | 0.557753 | 8.2:+27055880 | MS.gene011915:CDS |
| ACCCTTCTTTGAAGATGTAG+AGG | 0.559513 | 8.2:-27055760 | None:intergenic |
| TCCTCTACATCTTCAAAGAA+GGG | 0.564606 | 8.2:+27055759 | MS.gene011915:CDS |
| GCCAAGTCTTGGCTCATATG+TGG | 0.565359 | 8.2:+27055652 | MS.gene011915:CDS |
| CTTGACCATATCCGAATGAC+CGG | 0.569122 | 8.2:+27055915 | MS.gene011915:CDS |
| TGTGCTTGCAGAATCTGTGC+TGG | 0.570167 | 8.2:+27053437 | MS.gene011915:intron |
| CTCTCTGAATCCATCTCCAT+AGG | 0.574487 | 8.2:-27055853 | None:intergenic |
| ATCTTGCAAACATCACACCT+TGG | 0.577586 | 8.2:-27053791 | None:intergenic |
| TTCTTTGAAGATGTAGAGGA+AGG | 0.578442 | 8.2:-27055756 | None:intergenic |
| TCTTTCAGAGGTTACAGAGG+AGG | 0.581657 | 8.2:+27052596 | MS.gene011915:CDS |
| AAGTATCTGTTGCTTGATGA+CGG | 0.585206 | 8.2:+27054580 | MS.gene011915:CDS |
| TCTTGTATTTCAAGATAGAG+AGG | 0.585747 | 8.2:-27054661 | None:intergenic |
| ATTCAAGAAAGTTTGAGCGT+TGG | 0.587908 | 8.2:+27053094 | MS.gene011915:CDS |
| TGCAATGCCGAGATTGGCCA+TGG | 0.592397 | 8.2:+27053461 | MS.gene011915:CDS |
| GAATCAGTTTGAGACGGAGG+AGG | 0.593085 | 8.2:-27053121 | None:intergenic |
| AATTGCGATCTCTCTTTCAG+AGG | 0.593587 | 8.2:+27052584 | MS.gene011915:CDS |
| TGTCTCTCAACCAAAAGCAT+AGG | 0.601813 | 8.2:-27054724 | None:intergenic |
| CTCTCTTTCAGAGGTTACAG+AGG | 0.604714 | 8.2:+27052593 | MS.gene011915:CDS |
| AATATAGAATCAGTTTGAGA+CGG | 0.606429 | 8.2:-27053127 | None:intergenic |
| AGATTCTGAATCTGAAGATG+AGG | 0.610392 | 8.2:+27052925 | MS.gene011915:CDS |
| ATTCAGGACGAGGATACACC+GGG | 0.612301 | 8.2:+27052379 | MS.gene011915:CDS |
| TCATCTTCCTCGTCATCAAG+TGG | 0.612402 | 8.2:-27052956 | None:intergenic |
| ATAAGGAGCTGCATCACCCA+AGG | 0.612966 | 8.2:+27053774 | MS.gene011915:CDS |
| TGTCCATCACACGAACGCGA+TGG | 0.614948 | 8.2:+27054391 | MS.gene011915:CDS |
| CTGATGTTGAACAAAATGAA+GGG | 0.615941 | 8.2:+27052987 | MS.gene011915:CDS |
| CAGTTATCATATCGATGACA+CGG | 0.619691 | 8.2:-27055116 | None:intergenic |
| GTAAGGACGATTCCCAGACA+TGG | 0.624532 | 8.2:-27053738 | None:intergenic |
| GGAAGATGAACAACTTGCCA+GGG | 0.625754 | 8.2:+27053069 | MS.gene011915:CDS |
| ACAAGCACTGAATGAAGCCA+TGG | 0.627055 | 8.2:+27054744 | MS.gene011915:CDS |
| GCACTGAATGAAGCCATGGA+GGG | 0.628049 | 8.2:+27054748 | MS.gene011915:CDS |
| AACCATAAACATTCAGGACG+AGG | 0.628809 | 8.2:+27052369 | MS.gene011915:CDS |
| CGACAGGCTATGGAAATCTG+AGG | 0.634850 | 8.2:+27055607 | MS.gene011915:intron |
| TGTTGACGAAGTTCAACTTG+AGG | 0.636560 | 8.2:+27053048 | MS.gene011915:CDS |
| GGTTACAGAGGAGGTTACAG+AGG | 0.639025 | 8.2:+27052605 | MS.gene011915:CDS |
| TATCGGAAGGATACCTAGGA+AGG | 0.646461 | 8.2:-27055194 | None:intergenic |
| GATGTGCTCTATACTCAATG+AGG | 0.649586 | 8.2:-27054348 | None:intergenic |
| ATAGAATCAGTTTGAGACGG+AGG | 0.651123 | 8.2:-27053124 | None:intergenic |
| TATGGAGATGGATTCAGAGA+GGG | 0.654557 | 8.2:+27055855 | MS.gene011915:CDS |
| AGCACTGAATGAAGCCATGG+AGG | 0.655277 | 8.2:+27054747 | MS.gene011915:CDS |
| ACTTCCAATCACTGATTACG+AGG | 0.658587 | 8.2:+27053547 | MS.gene011915:CDS |
| GTTGTGTCCACTTGATGACG+AGG | 0.696227 | 8.2:+27052949 | MS.gene011915:CDS |
| TTGTAGCTGTCAGAGAATGG+AGG | 0.698487 | 8.2:+27054426 | MS.gene011915:CDS |
| CACCATTTACCTGAAACCAG+AGG | 0.704277 | 8.2:+27054916 | MS.gene011915:CDS |
| TGATGTTGAACAAAATGAAG+GGG | 0.704807 | 8.2:+27052988 | MS.gene011915:CDS |
| CTCTGACAGCTACAACAACG+AGG | 0.711035 | 8.2:-27054418 | None:intergenic |
| GGATAATCATGATAATTCCG+CGG | 0.721301 | 8.2:+27052425 | MS.gene011915:CDS |
| CTATGGAGATGGATTCAGAG+AGG | 0.725793 | 8.2:+27055854 | MS.gene011915:CDS |
| GTATCGCTGTCACTTCACAT+CGG | 0.754543 | 8.2:-27055158 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATATATTATATAAA+GGG | - | chr8.2:27054287-27054306 | None:intergenic | 0.0% |
| !!! | ATTTTTTAAATTTTAATAAT+TGG | + | chr8.2:27054108-27054127 | MS.gene011915:intron | 0.0% |
| !!! | TTTTTTAAATTTTAATAATT+GGG | + | chr8.2:27054109-27054128 | MS.gene011915:intron | 0.0% |
| !! | CTAATCAAATATTTATAAAA+TGG | - | chr8.2:27052826-27052845 | None:intergenic | 10.0% |
| !! | TATAAATATTTGATTAGAAA+AGG | + | chr8.2:27052829-27052848 | MS.gene011915:intron | 10.0% |
| !! | AAAGTTTAAATAAGTAGATA+TGG | - | chr8.2:27053617-27053636 | None:intergenic | 15.0% |
| !! | AAGTTTAAATAAGTAGATAT+GGG | - | chr8.2:27053616-27053635 | None:intergenic | 15.0% |
| !! | AGTATTATTTACAATAACAT+TGG | - | chr8.2:27053694-27053713 | None:intergenic | 15.0% |
| !! | ATGTTATTGTAAATAATACT+TGG | + | chr8.2:27053694-27053713 | MS.gene011915:intron | 15.0% |
| !! | ATTTCATATCAATTAATGAA+AGG | - | chr8.2:27054532-27054551 | None:intergenic | 15.0% |
| !! | TACTTATTTAAACTTTCTTT+AGG | + | chr8.2:27053621-27053640 | MS.gene011915:intron | 15.0% |
| !! | TTTATATTTCAGTATTAAGT+TGG | + | chr8.2:27055563-27055582 | MS.gene011915:intron | 15.0% |
| !!! | TTCAAGGATTTTATATTTAT+AGG | + | chr8.2:27055443-27055462 | MS.gene011915:intron | 15.0% |
| !!! | TTTTCATAATTACTTTTAGA+AGG | + | chr8.2:27053969-27053988 | MS.gene011915:intron | 15.0% |
| !! | AATTAATGAAAGGAAAAAGA+CGG | - | chr8.2:27054522-27054541 | None:intergenic | 20.0% |
| !! | ACAAGAAAAAAAAATGGTAT+CGG | - | chr8.2:27055214-27055233 | None:intergenic | 20.0% |
| !! | ATACAGAAAAGAGAAATAAA+AGG | - | chr8.2:27054823-27054842 | None:intergenic | 20.0% |
| !! | GTTAAGACAAGAAAAAAAAA+TGG | - | chr8.2:27055220-27055239 | None:intergenic | 20.0% |
| !! | TATGCAAGTATAAAAATAGA+TGG | - | chr8.2:27055404-27055423 | None:intergenic | 20.0% |
| !! | TTACCATAAATTATGCTATA+AGG | + | chr8.2:27053757-27053776 | MS.gene011915:CDS | 20.0% |
| !! | TTATAGCATAATTTATGGTA+AGG | - | chr8.2:27053758-27053777 | None:intergenic | 20.0% |
| !!! | ATTTTTTCAATGTTGATTGT+AGG | + | chr8.2:27054885-27054904 | MS.gene011915:intron | 20.0% |
| !!! | GAAATACAAGAATTTTATGA+AGG | + | chr8.2:27054673-27054692 | MS.gene011915:CDS | 20.0% |
| !!! | GATCATTCTAATTTAGAATT+TGG | + | chr8.2:27055258-27055277 | MS.gene011915:intron | 20.0% |
| !!! | TTGCTTAGAACATATATTTT+AGG | - | chr8.2:27052748-27052767 | None:intergenic | 20.0% |
| !!! | TTTCTACGATTTTACATATT+AGG | - | chr8.2:27053295-27053314 | None:intergenic | 20.0% |
| !!! | TTTTGTAATTCCAGATTTTA+AGG | + | chr8.2:27055070-27055089 | MS.gene011915:intron | 20.0% |
| !!! | TTTTTTCAATGTTGATTGTA+GGG | + | chr8.2:27054886-27054905 | MS.gene011915:intron | 20.0% |
| ! | AACAGGTATTAGTATGTATT+AGG | + | chr8.2:27054077-27054096 | MS.gene011915:intron | 25.0% |
| ! | AACATGATTGCAATAATCAT+TGG | - | chr8.2:27055304-27055323 | None:intergenic | 25.0% |
| ! | AATATAGAATCAGTTTGAGA+CGG | - | chr8.2:27053130-27053149 | None:intergenic | 25.0% |
| ! | AGAAATTTCACTACATTATG+TGG | + | chr8.2:27053921-27053940 | MS.gene011915:intron | 25.0% |
| ! | ATCACTGCATATGATAAAAA+GGG | + | chr8.2:27053258-27053277 | MS.gene011915:intron | 25.0% |
| ! | CATAAAGGGAAAAAAGTTAT+CGG | + | chr8.2:27052633-27052652 | MS.gene011915:CDS | 25.0% |
| ! | GAAATTTCACTACATTATGT+GGG | + | chr8.2:27053922-27053941 | MS.gene011915:intron | 25.0% |
| ! | GATATAAAGTTAAACTTGCA+CGG | - | chr8.2:27054210-27054229 | None:intergenic | 25.0% |
| ! | GGAATTTCATATTTGTTCAA+TGG | - | chr8.2:27052805-27052824 | None:intergenic | 25.0% |
| ! | TATAGAAATAACCAGTTCTT+AGG | + | chr8.2:27054245-27054264 | MS.gene011915:intron | 25.0% |
| ! | TATATTTATAGGTTACTGAC+AGG | + | chr8.2:27055454-27055473 | MS.gene011915:intron | 25.0% |
| ! | TCAACATTGAAAAAATCCAA+AGG | - | chr8.2:27054881-27054900 | None:intergenic | 25.0% |
| ! | TCTTTAGCAAATTCGATATA+TGG | - | chr8.2:27053239-27053258 | None:intergenic | 25.0% |
| ! | TGATAAAAAGGGAAAATGAT+TGG | + | chr8.2:27053269-27053288 | MS.gene011915:intron | 25.0% |
| ! | TTTGTGTAACATTGTTTGAA+TGG | + | chr8.2:27052696-27052715 | MS.gene011915:intron | 25.0% |
| !! | AGTTTCTTTTATAGACAAAC+AGG | + | chr8.2:27054060-27054079 | MS.gene011915:intron | 25.0% |
| !! | ATATGATAACTGAACCTTTT+AGG | + | chr8.2:27055127-27055146 | MS.gene011915:CDS | 25.0% |
| !!! | CTAAAAAGTTTGCTTTTCAT+AGG | + | chr8.2:27053366-27053385 | MS.gene011915:intron | 25.0% |
| !!! | GAACATATATTTTAGGTATC+CGG | - | chr8.2:27052741-27052760 | None:intergenic | 25.0% |
| !!! | TAATGTTTTGTTCTTTTCAC+AGG | + | chr8.2:27054028-27054047 | MS.gene011915:intron | 25.0% |
| AAGTAAAACATCCTTACAGT+GGG | - | chr8.2:27054970-27054989 | None:intergenic | 30.0% | |
| AATCTGCAGTACATAATTCA+AGG | + | chr8.2:27055427-27055446 | MS.gene011915:intron | 30.0% | |
| CTGATGTTGAACAAAATGAA+GGG | + | chr8.2:27052987-27053006 | MS.gene011915:CDS | 30.0% | |
| GATCACTGCATATGATAAAA+AGG | + | chr8.2:27053257-27053276 | MS.gene011915:intron | 30.0% | |
| GCTCCTTATAGCATAATTTA+TGG | - | chr8.2:27053763-27053782 | None:intergenic | 30.0% | |
| TCAAACAATTTGTCCTTAAC+TGG | + | chr8.2:27055342-27055361 | MS.gene011915:intron | 30.0% | |
| TCTTGTATTTCAAGATAGAG+AGG | - | chr8.2:27054664-27054683 | None:intergenic | 30.0% | |
| TGAAAACAGATCAAAGTCAA+TGG | - | chr8.2:27053955-27053974 | None:intergenic | 30.0% | |
| TGATGTTGAACAAAATGAAG+GGG | + | chr8.2:27052988-27053007 | MS.gene011915:CDS | 30.0% | |
| TTACAGAGGAAGATCATAAA+GGG | + | chr8.2:27052619-27052638 | MS.gene011915:CDS | 30.0% | |
| TTAGATTCAGAGATCTATTC+CGG | + | chr8.2:27055675-27055694 | MS.gene011915:CDS | 30.0% | |
| ! | AATTAGTGTTTTCTGTGTAC+CGG | + | chr8.2:27052719-27052738 | MS.gene011915:intron | 30.0% |
| ! | AGATTTATGCTTTTGCAAGA+CGG | + | chr8.2:27052658-27052677 | MS.gene011915:intron | 30.0% |
| ! | CTTTTTAGATGTCTACTATC+TGG | - | chr8.2:27053354-27053373 | None:intergenic | 30.0% |
| ! | GAAAAAAAAATGGTATCGGA+AGG | - | chr8.2:27055210-27055229 | None:intergenic | 30.0% |
| ! | TTATGATTTGCCAGAAATTG+TGG | + | chr8.2:27054132-27054151 | MS.gene011915:intron | 30.0% |
| !! | ATTTTAAGGAGACCAAGTAT+AGG | + | chr8.2:27055084-27055103 | MS.gene011915:CDS | 30.0% |
| !!! | AGAAAAGGTTACCTCTTTTT+TGG | + | chr8.2:27052844-27052863 | MS.gene011915:intron | 30.0% |
| !!! | GAAAAGGTTACCTCTTTTTT+GGG | + | chr8.2:27052845-27052864 | MS.gene011915:intron | 30.0% |
| !!! | TTCGACATTGTTTTGATCAT+TGG | - | chr8.2:27055541-27055560 | None:intergenic | 30.0% |
| !!! | TTGCAGTAAACGTTTTTAGT+CGG | - | chr8.2:27053415-27053434 | None:intergenic | 30.0% |
| ACCAAGTTCCTTCTCAAAAT+CGG | - | chr8.2:27055793-27055812 | None:intergenic | 35.0% | |
| AGATGGTAACTCAAGTGATT+TGG | - | chr8.2:27055387-27055406 | None:intergenic | 35.0% | |
| AGATTCTGAATCTGAAGATG+AGG | + | chr8.2:27052925-27052944 | MS.gene011915:CDS | 35.0% | |
| AGCATAAACTGTTATTACCG+CGG | - | chr8.2:27052445-27052464 | None:intergenic | 35.0% | |
| AGTAAAACATCCTTACAGTG+GGG | - | chr8.2:27054969-27054988 | None:intergenic | 35.0% | |
| ATTCAAGAAAGTTTGAGCGT+TGG | + | chr8.2:27053094-27053113 | MS.gene011915:CDS | 35.0% | |
| ATTTCACTACATTATGTGGG+AGG | + | chr8.2:27053925-27053944 | MS.gene011915:intron | 35.0% | |
| CAAGTAAAACATCCTTACAG+TGG | - | chr8.2:27054971-27054990 | None:intergenic | 35.0% | |
| CAGTTATCATATCGATGACA+CGG | - | chr8.2:27055119-27055138 | None:intergenic | 35.0% | |
| CATATTCCTTCTTCAACTTC+AGG | - | chr8.2:27055633-27055652 | None:intergenic | 35.0% | |
| CATCTTCAAAGAAGGGTAAA+CGG | + | chr8.2:27055766-27055785 | MS.gene011915:CDS | 35.0% | |
| CATTACAGTATTCCATGTCT+GGG | + | chr8.2:27053726-27053745 | MS.gene011915:intron | 35.0% | |
| CCATGTTGCTAAAATTCAAC+AGG | + | chr8.2:27053012-27053031 | MS.gene011915:CDS | 35.0% | |
| GATTCAGAATCTTCTTCTGA+AGG | - | chr8.2:27052917-27052936 | None:intergenic | 35.0% | |
| GCTGATGTTGAACAAAATGA+AGG | + | chr8.2:27052986-27053005 | MS.gene011915:CDS | 35.0% | |
| GGATAATCATGATAATTCCG+CGG | + | chr8.2:27052425-27052444 | MS.gene011915:CDS | 35.0% | |
| GTATTTCAAGATAGAGAGGT+TGG | - | chr8.2:27054660-27054679 | None:intergenic | 35.0% | |
| GTTACAGAGGAAGATCATAA+AGG | + | chr8.2:27052618-27052637 | MS.gene011915:CDS | 35.0% | |
| TACTTGGTCTCCTTAAAATC+TGG | - | chr8.2:27055083-27055102 | None:intergenic | 35.0% | |
| TAGTGGTAAATTCTGAGTGT+AGG | + | chr8.2:27052521-27052540 | MS.gene011915:intron | 35.0% | |
| TCATTACAGTATTCCATGTC+TGG | + | chr8.2:27053725-27053744 | MS.gene011915:intron | 35.0% | |
| TCCTCTACATCTTCAAAGAA+GGG | + | chr8.2:27055759-27055778 | MS.gene011915:CDS | 35.0% | |
| TGATGTCATAACCTAAGAAC+TGG | - | chr8.2:27054259-27054278 | None:intergenic | 35.0% | |
| TGATGTTGTTCCACAATTTC+TGG | - | chr8.2:27054145-27054164 | None:intergenic | 35.0% | |
| TGGCTTACCAAGTTTCTAAA+GGG | + | chr8.2:27052342-27052361 | MS.gene011915:CDS | 35.0% | |
| TTCCTCTACATCTTCAAAGA+AGG | + | chr8.2:27055758-27055777 | MS.gene011915:CDS | 35.0% | |
| TTTGTCAATTCTGTTGTGCT+TGG | + | chr8.2:27053861-27053880 | MS.gene011915:intron | 35.0% | |
| ! | AAGTATCTGTTGCTTGATGA+CGG | + | chr8.2:27054580-27054599 | MS.gene011915:CDS | 35.0% |
| ! | GACGTTTTTAAACACTTCAC+CGG | - | chr8.2:27052871-27052890 | None:intergenic | 35.0% |
| ! | TGCACGGTATTGAAAAATCA+CGG | - | chr8.2:27054194-27054213 | None:intergenic | 35.0% |
| ! | TTCTTTGAAGATGTAGAGGA+AGG | - | chr8.2:27055759-27055778 | None:intergenic | 35.0% |
| !! | CAGTATTTTTGTAGCCAGAA+AGG | - | chr8.2:27054373-27054392 | None:intergenic | 35.0% |
| !! | CCTGTTGAATTTTAGCAACA+TGG | - | chr8.2:27053015-27053034 | None:intergenic | 35.0% |
| !! | CTCTTCTGTTTATTTTCGAC+AGG | + | chr8.2:27055591-27055610 | MS.gene011915:intron | 35.0% |
| !! | CTTTTAGAAGGCTAGAAATC+AGG | + | chr8.2:27053981-27054000 | MS.gene011915:intron | 35.0% |
| !! | TGTTTATTTTCGACAGGCTA+TGG | + | chr8.2:27055597-27055616 | MS.gene011915:intron | 35.0% |
| !!! | ACAGCGATACTTGTTTTGTA+TGG | + | chr8.2:27055171-27055190 | MS.gene011915:CDS | 35.0% |
| AACCATAAACATTCAGGACG+AGG | + | chr8.2:27052369-27052388 | MS.gene011915:CDS | 40.0% | |
| AACTGAAATAGCCACCTCTA+TGG | + | chr8.2:27053315-27053334 | MS.gene011915:intron | 40.0% | |
| AATTGCGATCTCTCTTTCAG+AGG | + | chr8.2:27052584-27052603 | MS.gene011915:CDS | 40.0% | |
| AGAAGGAATATGCCAAGTCT+TGG | + | chr8.2:27055641-27055660 | MS.gene011915:CDS | 40.0% | |
| AGAGACTGAAGTTGCAATAG+TGG | + | chr8.2:27052504-27052523 | MS.gene011915:intron | 40.0% | |
| AGGACAATGCAAAATCAGGA+CGG | - | chr8.2:27054861-27054880 | None:intergenic | 40.0% | |
| AGTATAGAGCACATCCTTTC+TGG | + | chr8.2:27054356-27054375 | MS.gene011915:CDS | 40.0% | |
| ATATGGACACGACAGAGATT+CGG | + | chr8.2:27052404-27052423 | MS.gene011915:CDS | 40.0% | |
| ATCCTCGTCCTGAATGTTTA+TGG | - | chr8.2:27052374-27052393 | None:intergenic | 40.0% | |
| ATCTTGCAAACATCACACCT+TGG | - | chr8.2:27053794-27053813 | None:intergenic | 40.0% | |
| ATGGAAAACTTCCGGTCATT+CGG | - | chr8.2:27055929-27055948 | None:intergenic | 40.0% | |
| CAAACTTTCTTGAATTGCCC+TGG | - | chr8.2:27053089-27053108 | None:intergenic | 40.0% | |
| CATGCATCATTTCATGAGCT+AGG | - | chr8.2:27055486-27055505 | None:intergenic | 40.0% | |
| CATGCTTGGCTTAGACTTAA+AGG | + | chr8.2:27055502-27055521 | MS.gene011915:CDS | 40.0% | |
| CCAAAGGACAATGCAAAATC+AGG | - | chr8.2:27054865-27054884 | None:intergenic | 40.0% | |
| CTCATGAAATGATGCATGCT+TGG | + | chr8.2:27055488-27055507 | MS.gene011915:CDS | 40.0% | |
| CTGGCTTACCAAGTTTCTAA+AGG | + | chr8.2:27052341-27052360 | MS.gene011915:CDS | 40.0% | |
| GATCATTCTCCTGAAACAGA+CGG | - | chr8.2:27055242-27055261 | None:intergenic | 40.0% | |
| GATCTATGTTGTCACCATAG+AGG | - | chr8.2:27053332-27053351 | None:intergenic | 40.0% | |
| GATGTGCTCTATACTCAATG+AGG | - | chr8.2:27054351-27054370 | None:intergenic | 40.0% | |
| GCATGGCAACAAAAACATTC+TGG | - | chr8.2:27053521-27053540 | None:intergenic | 40.0% | |
| GGCGAAAAGAGGTTTGTAAA+AGG | - | chr8.2:27053157-27053176 | None:intergenic | 40.0% | |
| GGTTCGAACCATAAACATTC+AGG | + | chr8.2:27052363-27052382 | MS.gene011915:CDS | 40.0% | |
| TAGTTATCGAGCTCCAGTTA+AGG | - | chr8.2:27055358-27055377 | None:intergenic | 40.0% | |
| TCGCATAGTTACCTGTATAC+AGG | - | chr8.2:27053178-27053197 | None:intergenic | 40.0% | |
| TCTTGCAAACATCACACCTT+GGG | - | chr8.2:27053793-27053812 | None:intergenic | 40.0% | |
| TGATTGGAAGTTTGCAAGCA+TGG | - | chr8.2:27053538-27053557 | None:intergenic | 40.0% | |
| TGCAACTCAAAAACCTTCCA+TGG | - | chr8.2:27053481-27053500 | None:intergenic | 40.0% | |
| TGGTCGAAAAGTAAGTGAAG+TGG | + | chr8.2:27055278-27055297 | MS.gene011915:intron | 40.0% | |
| TGTTGACGAAGTTCAACTTG+AGG | + | chr8.2:27053048-27053067 | MS.gene011915:CDS | 40.0% | |
| TTCGTTGTTGAACGCTAACA+TGG | + | chr8.2:27053583-27053602 | MS.gene011915:intron | 40.0% | |
| TTGTCTTAACCGTCTGTTTC+AGG | + | chr8.2:27055230-27055249 | MS.gene011915:intron | 40.0% | |
| TTGTTGTAGCTGTCAGAGAA+TGG | + | chr8.2:27054423-27054442 | MS.gene011915:CDS | 40.0% | |
| TTTCCAATCAGTGCAGTCAA+CGG | + | chr8.2:27054552-27054571 | MS.gene011915:intron | 40.0% | |
| ! | ACCCTTCTTTGAAGATGTAG+AGG | - | chr8.2:27055763-27055782 | None:intergenic | 40.0% |
| ! | ACTTCCAATCACTGATTACG+AGG | + | chr8.2:27053547-27053566 | MS.gene011915:CDS | 40.0% |
| ! | ATAGAATCAGTTTGAGACGG+AGG | - | chr8.2:27053127-27053146 | None:intergenic | 40.0% |
| ! | ATCATGTGTTGTTGCCAACA+AGG | + | chr8.2:27054475-27054494 | MS.gene011915:intron | 40.0% |
| ! | CCTGATTTTGCATTGTCCTT+TGG | + | chr8.2:27054862-27054881 | MS.gene011915:intron | 40.0% |
| ! | GCAGCAAATTCCTATGCTTT+TGG | + | chr8.2:27054714-27054733 | MS.gene011915:CDS | 40.0% |
| ! | GTTCGAACCCTTTAGAAACT+TGG | - | chr8.2:27052352-27052371 | None:intergenic | 40.0% |
| ! | TATGGAGATGGATTCAGAGA+GGG | + | chr8.2:27055855-27055874 | MS.gene011915:CDS | 40.0% |
| ! | TGATGATGCTTCTTCACTTC+CGG | - | chr8.2:27055703-27055722 | None:intergenic | 40.0% |
| ! | TGTCTCTCAACCAAAAGCAT+AGG | - | chr8.2:27054727-27054746 | None:intergenic | 40.0% |
| ! | TTTATGCTTTTGCAAGACGG+TGG | + | chr8.2:27052661-27052680 | MS.gene011915:intron | 40.0% |
| !! | TAAACGGTCCGATTTTGAGA+AGG | + | chr8.2:27055782-27055801 | MS.gene011915:CDS | 40.0% |
| !! | TCCGATTTTGAGAAGGAACT+TGG | + | chr8.2:27055789-27055808 | MS.gene011915:CDS | 40.0% |
| !! | TTGTTTTGTATGGCCTTCCT+AGG | + | chr8.2:27055181-27055200 | MS.gene011915:CDS | 40.0% |
| !!! | GGAAGGTTTTTGAGTTGCAT+GGG | + | chr8.2:27053482-27053501 | MS.gene011915:CDS | 40.0% |
| !!! | TGGAAGGTTTTTGAGTTGCA+TGG | + | chr8.2:27053481-27053500 | MS.gene011915:CDS | 40.0% |
| AAACCTTCCATGGCCAATCT+CGG | - | chr8.2:27053471-27053490 | None:intergenic | 45.0% | |
| AACTTCCGGTCATTCGGATA+TGG | - | chr8.2:27055923-27055942 | None:intergenic | 45.0% | |
| ACCACATATGAGCCAAGACT+TGG | - | chr8.2:27055656-27055675 | None:intergenic | 45.0% | |
| ACCTGTATACAGGCGAAAAG+AGG | - | chr8.2:27053168-27053187 | None:intergenic | 45.0% | |
| AGGAAGATGAACAACTTGCC+AGG | + | chr8.2:27053068-27053087 | MS.gene011915:CDS | 45.0% | |
| CACCATTTACCTGAAACCAG+AGG | + | chr8.2:27054916-27054935 | MS.gene011915:CDS | 45.0% | |
| CAGATCCCACAAAATTCAGC+TGG | + | chr8.2:27054325-27054344 | MS.gene011915:intron | 45.0% | |
| CGAACCTCGTAATCAGTGAT+TGG | - | chr8.2:27053554-27053573 | None:intergenic | 45.0% | |
| CTATGTTGTCACCATAGAGG+TGG | - | chr8.2:27053329-27053348 | None:intergenic | 45.0% | |
| CTCTCTGAATCCATCTCCAT+AGG | - | chr8.2:27055856-27055875 | None:intergenic | 45.0% | |
| CTCTCTTTCAGAGGTTACAG+AGG | + | chr8.2:27052593-27052612 | MS.gene011915:CDS | 45.0% | |
| CTTGACCATATCCGAATGAC+CGG | + | chr8.2:27055915-27055934 | MS.gene011915:CDS | 45.0% | |
| GATAGTGAGTGTCTCCTTGT+TGG | - | chr8.2:27054492-27054511 | None:intergenic | 45.0% | |
| GGAAGATGAACAACTTGCCA+GGG | + | chr8.2:27053069-27053088 | MS.gene011915:CDS | 45.0% | |
| GTGAGCTATCTGTCTCAATC+TGG | - | chr8.2:27055830-27055849 | None:intergenic | 45.0% | |
| GTGTCTTGAGTGTCTCGATT+CGG | + | chr8.2:27054612-27054631 | MS.gene011915:CDS | 45.0% | |
| TATCGGAAGGATACCTAGGA+AGG | - | chr8.2:27055197-27055216 | None:intergenic | 45.0% | |
| TCATCTTCCTCGTCATCAAG+TGG | - | chr8.2:27052959-27052978 | None:intergenic | 45.0% | |
| TCTGTCGTGTCCATATTTCC+CGG | - | chr8.2:27052400-27052419 | None:intergenic | 45.0% | |
| TCTTTCAGAGGTTACAGAGG+AGG | + | chr8.2:27052596-27052615 | MS.gene011915:CDS | 45.0% | |
| TGCTCAAGTATGGGCTTAGA+CGG | + | chr8.2:27055889-27055908 | MS.gene011915:CDS | 45.0% | |
| TTCTGACAAGCAAAGTCCTC+TGG | - | chr8.2:27054935-27054954 | None:intergenic | 45.0% | |
| TTGTAGCTGTCAGAGAATGG+AGG | + | chr8.2:27054426-27054445 | MS.gene011915:CDS | 45.0% | |
| ! | AAGCAAAGTCCTCTGGTTTC+AGG | - | chr8.2:27054928-27054947 | None:intergenic | 45.0% |
| ! | ACCTCTTTTCGCCTGTATAC+AGG | + | chr8.2:27053164-27053183 | MS.gene011915:CDS | 45.0% |
| ! | ATGAGGCCAGCTGAATTTTG+TGG | - | chr8.2:27054334-27054353 | None:intergenic | 45.0% |
| ! | ATGGTATCGGAAGGATACCT+AGG | - | chr8.2:27055201-27055220 | None:intergenic | 45.0% |
| ! | CTATGGAGATGGATTCAGAG+AGG | + | chr8.2:27055854-27055873 | MS.gene011915:CDS | 45.0% |
| ! | GTATCGCTGTCACTTCACAT+CGG | - | chr8.2:27055161-27055180 | None:intergenic | 45.0% |
| ! | GTCCTCTGGTTTCAGGTAAA+TGG | - | chr8.2:27054921-27054940 | None:intergenic | 45.0% |
| ! | TACATTCTTTTCGCCCTCCA+TGG | - | chr8.2:27054764-27054783 | None:intergenic | 45.0% |
| ! | TGAGGCCAGCTGAATTTTGT+GGG | - | chr8.2:27054333-27054352 | None:intergenic | 45.0% |
| !! | ACAAGCACTGAATGAAGCCA+TGG | + | chr8.2:27054744-27054763 | MS.gene011915:CDS | 45.0% |
| !! | GTGTCTCGATTCGGCTATTA+TGG | + | chr8.2:27054621-27054640 | MS.gene011915:CDS | 45.0% |
| !!! | AGGTTACCTCTTTTTTGGGC+CGG | + | chr8.2:27052849-27052868 | MS.gene011915:intron | 45.0% |
| !! | GATATTAATATATTATATAA+AGG | - | chr8.2:27054288-27054307 | None:intergenic | 5.0% |
| !! | TATTAATATATTATATAAAG+GGG | - | chr8.2:27054286-27054305 | None:intergenic | 5.0% |
| AACCAGGCAGTGCTCAAGTA+TGG | + | chr8.2:27055879-27055898 | MS.gene011915:CDS | 50.0% | |
| ACAGATAGCTCACCAGCCTA+TGG | + | chr8.2:27055837-27055856 | MS.gene011915:CDS | 50.0% | |
| ACCAGGCAGTGCTCAAGTAT+GGG | + | chr8.2:27055880-27055899 | MS.gene011915:CDS | 50.0% | |
| ACTTCACCGGCCCAAAAAAG+AGG | - | chr8.2:27052858-27052877 | None:intergenic | 50.0% | |
| AGCAAACTGTCCCCACTGTA+AGG | + | chr8.2:27054956-27054975 | MS.gene011915:intron | 50.0% | |
| AGGAGACCAAGTATAGGAGC+AGG | + | chr8.2:27055090-27055109 | MS.gene011915:CDS | 50.0% | |
| ATAAGGAGCTGCATCACCCA+AGG | + | chr8.2:27053774-27053793 | MS.gene011915:CDS | 50.0% | |
| ATTCAGGACGAGGATACACC+GGG | + | chr8.2:27052379-27052398 | MS.gene011915:CDS | 50.0% | |
| CATCGGCGTATCAGCCTAAA+AGG | - | chr8.2:27055144-27055163 | None:intergenic | 50.0% | |
| CATTCAGGACGAGGATACAC+CGG | + | chr8.2:27052378-27052397 | MS.gene011915:CDS | 50.0% | |
| CGACAGGCTATGGAAATCTG+AGG | + | chr8.2:27055607-27055626 | MS.gene011915:intron | 50.0% | |
| CGAGGATACACCGGGAAATA+TGG | + | chr8.2:27052387-27052406 | MS.gene011915:CDS | 50.0% | |
| CTCTGACAGCTACAACAACG+AGG | - | chr8.2:27054421-27054440 | None:intergenic | 50.0% | |
| CTGAATCCATCTCCATAGGC+TGG | - | chr8.2:27055852-27055871 | None:intergenic | 50.0% | |
| CTGAGGCCTGAAGTTGAAGA+AGG | + | chr8.2:27055624-27055643 | MS.gene011915:CDS | 50.0% | |
| GCACTGAATGAAGCCATGGA+GGG | + | chr8.2:27054748-27054767 | MS.gene011915:CDS | 50.0% | |
| GCCAAGTCTTGGCTCATATG+TGG | + | chr8.2:27055652-27055671 | MS.gene011915:CDS | 50.0% | |
| GGTTACAGAGGAGGTTACAG+AGG | + | chr8.2:27052605-27052624 | MS.gene011915:CDS | 50.0% | |
| GTAAGGACGATTCCCAGACA+TGG | - | chr8.2:27053741-27053760 | None:intergenic | 50.0% | |
| TCAGAGATCTATTCCGGCTC+CGG | + | chr8.2:27055681-27055700 | MS.gene011915:CDS | 50.0% | |
| TGAGTTGCATGGGAGCTGTA+TGG | + | chr8.2:27053492-27053511 | MS.gene011915:CDS | 50.0% | |
| TGGATTCAGAGAGGGTAACC+AGG | + | chr8.2:27055863-27055882 | MS.gene011915:CDS | 50.0% | |
| TGTGCTTGCAGAATCTGTGC+TGG | + | chr8.2:27053437-27053456 | MS.gene011915:intron | 50.0% | |
| ! | AGCACTGAATGAAGCCATGG+AGG | + | chr8.2:27054747-27054766 | MS.gene011915:CDS | 50.0% |
| ! | GAATCAGTTTGAGACGGAGG+AGG | - | chr8.2:27053124-27053143 | None:intergenic | 50.0% |
| ! | TGTCCGTTGACTGCACTGAT+TGG | - | chr8.2:27054558-27054577 | None:intergenic | 50.0% |
| !! | GTTGTGTCCACTTGATGACG+AGG | + | chr8.2:27052949-27052968 | MS.gene011915:CDS | 50.0% |
| AGCTCACCAGCCTATGGAGA+TGG | + | chr8.2:27055843-27055862 | MS.gene011915:CDS | 55.0% | |
| CGGTAGCCTGCTCCTATACT+TGG | - | chr8.2:27055099-27055118 | None:intergenic | 55.0% | |
| GTACCATCGCGTTCGTGTGA+TGG | - | chr8.2:27054397-27054416 | None:intergenic | 55.0% | |
| TGCTTCTTCACTTCCGGAGC+CGG | - | chr8.2:27055697-27055716 | None:intergenic | 55.0% | |
| TGTCCATCACACGAACGCGA+TGG | + | chr8.2:27054391-27054410 | MS.gene011915:CDS | 55.0% | |
| ! | ATGCCGAGATTGGCCATGGA+AGG | + | chr8.2:27053465-27053484 | MS.gene011915:CDS | 55.0% |
| ! | TGCAATGCCGAGATTGGCCA+TGG | + | chr8.2:27053461-27053480 | MS.gene011915:CDS | 55.0% |
| GCTGGCTGCAATGCCGAGAT+TGG | + | chr8.2:27053455-27053474 | MS.gene011915:CDS | 60.0% | |
| ! | GCCCATACTTGAGCACTGCC+TGG | - | chr8.2:27055884-27055903 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 27052336 | 27055950 | 27052336 | ID=MS.gene011915 |
| chr8.2 | mRNA | 27052336 | 27055950 | 27052336 | ID=MS.gene011915.t1;Parent=MS.gene011915 |
| chr8.2 | exon | 27052336 | 27052446 | 27052336 | ID=MS.gene011915.t1.exon1;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27052336 | 27052446 | 27052336 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27052543 | 27052654 | 27052543 | ID=MS.gene011915.t1.exon2;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27052543 | 27052654 | 27052543 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27052921 | 27053185 | 27052921 | ID=MS.gene011915.t1.exon3;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27052921 | 27053185 | 27052921 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27053448 | 27053568 | 27053448 | ID=MS.gene011915.t1.exon4;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27053448 | 27053568 | 27053448 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27053734 | 27053817 | 27053734 | ID=MS.gene011915.t1.exon5;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27053734 | 27053817 | 27053734 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27054328 | 27054447 | 27054328 | ID=MS.gene011915.t1.exon6;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27054328 | 27054447 | 27054328 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27054568 | 27054780 | 27054568 | ID=MS.gene011915.t1.exon7;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27054568 | 27054780 | 27054568 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27054907 | 27054972 | 27054907 | ID=MS.gene011915.t1.exon8;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27054907 | 27054972 | 27054907 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27055084 | 27055202 | 27055084 | ID=MS.gene011915.t1.exon9;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27055084 | 27055202 | 27055084 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27055465 | 27055523 | 27055465 | ID=MS.gene011915.t1.exon10;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27055465 | 27055523 | 27055465 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| chr8.2 | exon | 27055613 | 27055950 | 27055613 | ID=MS.gene011915.t1.exon11;Parent=MS.gene011915.t1 |
| chr8.2 | CDS | 27055613 | 27055950 | 27055613 | ID=cds.MS.gene011915.t1;Parent=MS.gene011915.t1 |
| Gene Sequence |
| Protein sequence |
