AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012092

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012092.t1 MTR_8g076110 88.047 343 8 3 1 343 2 311 0.0 613
MS.gene012092.t1 MTR_5g021710 62.060 369 92 10 1 342 4 351 1.85e-142 407
MS.gene012092.t1 MTR_4g036030 51.940 335 110 9 3 308 5 317 2.24e-106 315
MS.gene012092.t1 MTR_4g101680 51.543 324 103 9 3 298 5 302 1.40e-99 298
MS.gene012092.t1 MTR_1g096430 45.070 355 146 8 1 327 3 336 2.24e-95 287
MS.gene012092.t1 MTR_5g012080 51.084 323 119 11 3 306 5 307 1.47e-94 285
MS.gene012092.t1 MTR_8g024480 41.429 350 154 7 2 311 12 350 2.43e-81 254
MS.gene012092.t1 MTR_2g062730 45.741 317 119 9 2 294 7 294 3.86e-80 248
MS.gene012092.t1 MTR_4g035590 67.073 164 41 1 5 168 8 158 3.09e-77 241
MS.gene012092.t1 MTR_2g064090 52.326 172 72 3 5 176 6 167 1.56e-61 200
MS.gene012092.t1 MTR_3g064580 45.833 192 88 3 5 190 6 187 2.63e-57 197
MS.gene012092.t1 MTR_3g435150 53.571 168 61 3 5 169 16 169 3.38e-57 187
MS.gene012092.t1 MTR_4g108760 50.595 168 66 3 5 169 17 170 2.15e-56 187
MS.gene012092.t1 MTR_5g076850 46.632 193 84 4 5 196 6 180 7.19e-56 192
MS.gene012092.t1 MTR_6g477900 51.515 165 63 3 5 166 6 156 1.37e-55 181
MS.gene012092.t1 MTR_6g012670 51.829 164 68 2 5 168 20 172 6.21e-55 182
MS.gene012092.t1 MTR_7g085260 50.000 174 66 4 5 171 17 176 1.49e-54 183
MS.gene012092.t1 MTR_7g085220 46.703 182 79 5 2 174 5 177 1.17e-53 180
MS.gene012092.t1 MTR_6g084430 47.368 171 75 2 1 171 1 156 1.43e-53 179
MS.gene012092.t1 MTR_2g064470 45.833 192 87 6 1 192 7 181 2.79e-53 177
MS.gene012092.t1 MTR_5g041940 44.624 186 93 3 5 189 3 179 3.79e-53 176
MS.gene012092.t1 MTR_8g094580 49.701 167 74 3 5 171 7 163 4.32e-53 176
MS.gene012092.t1 MTR_2g078700 49.102 167 72 3 5 169 23 178 1.55e-52 178
MS.gene012092.t1 MTR_8g467490 42.714 199 106 5 1 196 10 203 1.94e-52 178
MS.gene012092.t1 MTR_1g069805 44.444 198 88 5 3 198 8 185 2.04e-52 174
MS.gene012092.t1 MTR_4g081870 47.239 163 77 2 5 167 9 162 1.21e-51 172
MS.gene012092.t1 MTR_2g080010 48.521 169 79 4 5 169 15 179 1.74e-51 174
MS.gene012092.t1 MTR_3g109340 46.471 170 75 4 2 169 19 174 1.75e-51 174
MS.gene012092.t1 MTR_6g032770 48.571 175 71 4 5 174 18 178 1.92e-51 175
MS.gene012092.t1 MTR_3g116070 40.217 276 113 10 2 272 20 248 2.34e-51 174
MS.gene012092.t1 MTR_3g096920 48.503 167 75 4 5 171 7 162 2.36e-51 172
MS.gene012092.t1 MTR_6g011860 44.330 194 93 7 7 191 17 204 2.39e-51 175
MS.gene012092.t1 MTR_5g040420 46.286 175 87 4 1 173 10 179 3.46e-51 175
MS.gene012092.t1 MTR_3g109340 46.471 170 74 4 2 169 19 173 4.58e-51 173
MS.gene012092.t1 MTR_1g008740 47.399 173 74 5 2 171 10 168 8.57e-51 172
MS.gene012092.t1 MTR_1g008740 47.399 173 74 5 2 171 24 182 1.15e-50 172
MS.gene012092.t1 MTR_3g088110 47.904 167 76 3 5 171 7 162 1.59e-50 170
MS.gene012092.t1 MTR_3g070030 48.235 170 74 4 6 173 20 177 2.16e-50 171
MS.gene012092.t1 MTR_3g096140 36.713 286 151 8 7 281 9 275 2.99e-50 171
MS.gene012092.t1 MTR_7g011130 51.807 166 70 4 8 167 22 183 3.38e-50 171
MS.gene012092.t1 MTR_3g096140 36.268 284 151 8 7 279 9 273 7.42e-50 168
MS.gene012092.t1 MTR_7g097090 49.390 164 64 4 3 164 8 154 1.14e-49 168
MS.gene012092.t1 MTR_2g079990 47.904 167 74 3 5 171 16 169 1.36e-49 169
MS.gene012092.t1 MTR_2g079990 44.324 185 82 3 5 171 16 197 3.34e-49 169
MS.gene012092.t1 MTR_7g011120 51.250 160 74 2 8 167 11 166 3.61e-49 167
MS.gene012092.t1 MTR_4g089135 44.565 184 76 4 5 169 15 191 4.19e-49 168
MS.gene012092.t1 MTR_4g098630 49.091 165 70 3 5 166 6 159 8.59e-49 166
MS.gene012092.t1 MTR_3g096920 42.640 197 79 4 5 171 7 199 9.58e-49 167
MS.gene012092.t1 MTR_7g005280 48.000 175 71 4 5 177 15 171 1.00e-48 164
MS.gene012092.t1 MTR_8g059170 47.305 167 77 2 5 171 14 169 1.20e-48 166
MS.gene012092.t1 MTR_2157s0010 46.667 165 81 3 5 166 8 168 1.38e-48 164
MS.gene012092.t1 MTR_5g014300 49.112 169 65 5 5 166 6 160 1.41e-48 166
MS.gene012092.t1 MTR_2g093810 46.328 177 84 4 6 180 15 182 1.49e-48 166
MS.gene012092.t1 MTR_1g090720 46.369 179 88 4 3 180 40 211 5.17e-48 168
MS.gene012092.t1 MTR_7g100990 46.746 169 75 4 5 169 11 168 3.99e-47 162
MS.gene012092.t1 MTR_5g069030 47.368 171 79 3 5 175 25 184 9.60e-46 165
MS.gene012092.t1 MTR_8g063550 45.963 161 76 2 7 167 8 157 4.34e-45 157
MS.gene012092.t1 MTR_5g090970 36.496 274 145 9 2 255 15 279 5.68e-45 156
MS.gene012092.t1 MTR_2g068880 45.614 171 85 4 5 169 21 189 6.08e-45 156
MS.gene012092.t1 MTR_1g097300 52.344 128 60 1 7 134 21 147 6.81e-45 162
MS.gene012092.t1 MTR_8g063550 45.963 161 76 2 7 167 8 157 9.33e-45 159
MS.gene012092.t1 MTR_3g093040 45.122 164 75 3 5 166 108 258 1.01e-44 155
MS.gene012092.t1 MTR_8g063550 45.963 161 76 2 7 167 8 157 1.21e-44 159
MS.gene012092.t1 MTR_3g093050 48.148 162 73 3 5 166 22 172 4.81e-44 160
MS.gene012092.t1 MTR_3g093050 48.148 162 73 3 5 166 22 172 7.01e-44 159
MS.gene012092.t1 MTR_2g068920 44.633 177 78 5 5 169 20 188 2.18e-43 151
MS.gene012092.t1 MTR_5g090970 36.496 274 144 10 2 255 15 278 3.32e-43 151
MS.gene012092.t1 MTR_8g093580 45.963 161 76 3 7 167 8 157 4.21e-43 155
MS.gene012092.t1 MTR_1g090723 39.024 205 107 6 7 208 10 199 1.14e-41 154
MS.gene012092.t1 MTR_4g075980 43.103 174 78 4 2 172 12 167 3.22e-41 146
MS.gene012092.t1 MTR_3g096140 34.191 272 149 8 21 281 2 254 3.42e-41 147
MS.gene012092.t1 MTR_1g090723 39.024 205 106 6 7 208 10 198 4.34e-41 151
MS.gene012092.t1 MTR_2g086880 51.200 125 59 1 7 131 20 142 5.58e-41 151
MS.gene012092.t1 MTR_1g090723 39.024 205 106 6 7 208 10 198 5.62e-41 152
MS.gene012092.t1 MTR_2g086880 51.200 125 59 1 7 131 20 142 6.47e-41 150
MS.gene012092.t1 MTR_3g070040 44.242 165 80 2 9 173 12 164 2.61e-40 144
MS.gene012092.t1 MTR_0036s0150 36.986 219 121 6 7 221 7 212 4.21e-40 148
MS.gene012092.t1 MTR_4g134460 51.145 131 60 2 4 133 53 180 4.41e-40 146
MS.gene012092.t1 MTR_8g099750 43.114 167 83 4 5 169 14 170 2.44e-39 139
MS.gene012092.t1 MTR_3g098810 42.353 170 83 4 5 169 14 173 1.25e-37 135
MS.gene012092.t1 MTR_4g052620 45.283 159 78 4 1 153 1 156 1.04e-36 133
MS.gene012092.t1 MTR_3g098810 43.046 151 77 2 5 151 14 159 7.04e-36 128
MS.gene012092.t1 MTR_2g086690 50.000 134 57 6 6 132 5 135 1.77e-33 124
MS.gene012092.t1 MTR_8g023840 45.890 146 72 5 5 147 11 152 3.35e-33 127
MS.gene012092.t1 MTR_8g023860 45.255 137 70 4 5 138 12 146 7.55e-31 121
MS.gene012092.t1 MTR_8g094580 46.847 111 52 2 61 171 6 109 8.48e-31 117
MS.gene012092.t1 MTR_4g094302 36.585 164 87 4 5 166 11 159 2.05e-30 114
MS.gene012092.t1 MTR_8g023900 42.000 150 82 4 1 147 8 155 2.02e-29 117
MS.gene012092.t1 MTR_8g023900 42.581 155 77 6 1 147 184 334 1.42e-27 112
MS.gene012092.t1 MTR_4g094302 42.748 131 62 3 5 133 11 130 3.65e-29 110
MS.gene012092.t1 MTR_7g105170 35.465 172 102 5 5 172 4 170 1.76e-28 111
MS.gene012092.t1 MTR_8g023930 45.385 130 66 4 5 131 24 151 9.96e-28 113
MS.gene012092.t1 MTR_8g023880 29.098 244 132 8 3 229 5 224 7.67e-24 99.4
MS.gene012092.t1 MTR_7g070140 49.425 87 41 2 56 140 13 98 5.04e-23 93.6
MS.gene012092.t1 MTR_8g093790 33.129 163 76 8 5 167 10 139 8.04e-17 77.8
MS.gene012092.t1 MTR_3g096400 26.946 167 103 6 5 165 7 160 1.27e-14 72.4
MS.gene012092.t1 MTR_7g083330 30.827 133 87 4 5 136 18 146 2.56e-14 71.2
MS.gene012092.t1 MTR_7g083360 28.571 147 97 5 5 147 10 152 1.45e-13 68.2
MS.gene012092.t1 MTR_7g070150 41.667 72 29 1 104 175 8 66 3.16e-13 65.1
MS.gene012092.t1 MTR_7g083370 28.788 132 89 4 1 131 6 133 1.46e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012092.t1 AT2G18060 56.201 379 113 10 1 343 4 365 6.21e-139 399
MS.gene012092.t1 AT2G18060 56.201 379 113 10 1 343 4 365 6.21e-139 399
MS.gene012092.t1 AT4G36160 62.305 321 83 9 2 299 10 315 2.40e-130 377
MS.gene012092.t1 AT4G36160 62.305 321 83 9 2 299 6 311 2.42e-130 377
MS.gene012092.t1 AT4G36160 62.305 321 83 9 2 299 6 311 2.42e-130 377
MS.gene012092.t1 AT5G66300 56.311 309 98 9 3 299 9 292 1.92e-110 323
MS.gene012092.t1 AT1G12260 49.722 360 111 10 3 306 5 350 1.40e-100 302
MS.gene012092.t1 AT1G12260 52.516 318 112 7 3 306 5 297 2.31e-97 292
MS.gene012092.t1 AT1G62700 49.422 346 106 9 3 299 5 330 3.68e-96 291
MS.gene012092.t1 AT1G62700 49.422 346 106 9 3 299 5 330 3.68e-96 291
MS.gene012092.t1 AT5G62380 46.708 319 147 5 1 309 1 306 2.55e-91 277
MS.gene012092.t1 AT5G62380 46.708 319 147 5 1 309 1 306 2.55e-91 277
MS.gene012092.t1 AT1G71930 48.649 296 129 4 1 295 5 278 2.58e-89 271
MS.gene012092.t1 AT1G71930 48.649 296 129 4 1 295 5 278 2.58e-89 271
MS.gene012092.t1 AT2G46770 47.368 304 125 6 2 296 13 290 1.76e-82 255
MS.gene012092.t1 AT1G32770 45.752 306 146 5 2 300 13 305 1.72e-80 249
MS.gene012092.t1 AT2G18060 47.797 295 100 11 85 343 1 277 1.86e-76 236
MS.gene012092.t1 AT1G33280 65.854 164 43 1 5 168 8 158 2.11e-76 237
MS.gene012092.t1 AT4G10350 66.463 164 45 2 5 168 9 162 2.18e-76 238
MS.gene012092.t1 AT3G61910 43.624 298 135 5 2 296 8 275 2.26e-75 236
MS.gene012092.t1 AT1G79580 65.089 169 45 2 5 172 17 172 3.01e-75 236
MS.gene012092.t1 AT1G79580 65.089 169 45 2 5 172 17 172 3.01e-75 236
MS.gene012092.t1 AT1G79580 65.089 169 45 2 5 172 17 172 3.01e-75 236
MS.gene012092.t1 AT1G79580 65.089 169 45 2 5 172 17 172 3.01e-75 236
MS.gene012092.t1 AT1G79580 65.089 169 45 2 5 172 17 172 3.01e-75 236
MS.gene012092.t1 AT3G18400 50.877 171 70 3 1 171 1 157 1.44e-58 192
MS.gene012092.t1 AT3G17730 45.876 194 90 3 5 198 6 184 2.02e-57 186
MS.gene012092.t1 AT5G39610 52.096 167 63 3 5 168 20 172 2.13e-56 185
MS.gene012092.t1 AT5G61430 52.121 165 62 3 5 166 16 166 2.45e-55 184
MS.gene012092.t1 AT5G07680 51.515 165 63 3 5 166 3 153 2.45e-55 183
MS.gene012092.t1 AT2G24430 49.701 167 68 4 2 166 13 165 2.63e-55 183
MS.gene012092.t1 AT2G24430 49.701 167 68 4 2 166 13 165 2.63e-55 183
MS.gene012092.t1 AT5G07680 51.515 165 63 3 5 166 17 167 3.15e-55 183
MS.gene012092.t1 AT3G03200 51.235 162 69 2 5 166 6 157 3.70e-55 187
MS.gene012092.t1 AT5G17260 50.617 162 70 3 5 166 6 157 4.52e-55 187
MS.gene012092.t1 AT1G69490 46.429 168 81 2 2 169 6 164 1.07e-53 177
MS.gene012092.t1 AT3G29035 60.000 130 49 1 5 134 24 150 1.51e-53 179
MS.gene012092.t1 AT1G54330 51.497 167 65 4 5 170 6 157 2.20e-53 178
MS.gene012092.t1 AT1G65910 50.000 162 70 2 5 166 6 156 2.27e-53 186
MS.gene012092.t1 AT1G56010 45.641 195 88 7 1 192 15 194 4.68e-53 177
MS.gene012092.t1 AT5G46590 59.848 132 51 2 3 133 4 134 5.12e-53 176
MS.gene012092.t1 AT5G46590 59.848 132 51 2 3 133 4 134 6.18e-53 176
MS.gene012092.t1 AT3G15170 50.000 176 75 4 2 175 17 181 1.09e-52 176
MS.gene012092.t1 AT1G61110 49.438 178 79 5 5 177 16 187 1.26e-52 176
MS.gene012092.t1 AT1G76420 52.096 167 64 4 2 166 19 171 6.27e-52 175
MS.gene012092.t1 AT1G77450 47.953 171 78 3 6 176 11 170 6.60e-52 172
MS.gene012092.t1 AT5G18270 49.398 166 66 4 5 166 21 172 1.13e-51 174
MS.gene012092.t1 AT3G12977 47.647 170 75 3 1 169 14 170 1.76e-51 172
MS.gene012092.t1 AT5G63790 49.701 167 75 4 5 171 50 207 1.90e-51 173
MS.gene012092.t1 AT5G63790 49.701 167 75 4 5 171 60 217 2.13e-51 173
MS.gene012092.t1 AT3G10490 39.732 224 122 5 1 223 23 234 2.27e-51 171
MS.gene012092.t1 AT3G10490 39.381 226 124 5 1 225 23 236 3.02e-51 176
MS.gene012092.t1 AT5G18270 48.795 166 67 4 5 166 21 172 4.60e-51 173
MS.gene012092.t1 AT5G53950 49.398 166 71 3 5 168 17 171 8.59e-51 173
MS.gene012092.t1 AT5G08790 49.701 167 75 4 5 171 7 164 1.26e-50 170
MS.gene012092.t1 AT3G04060 43.284 201 83 5 5 201 20 193 2.00e-50 171
MS.gene012092.t1 AT1G01720 37.956 274 141 9 5 272 7 257 2.23e-50 170
MS.gene012092.t1 AT4G17980 54.348 138 60 2 3 138 4 140 2.43e-50 169
MS.gene012092.t1 AT3G10480 44.382 178 88 3 3 180 25 191 2.47e-50 174
MS.gene012092.t1 AT4G10350 67.797 118 28 2 50 167 7 114 2.59e-50 170
MS.gene012092.t1 AT4G17980 47.590 166 76 3 3 166 4 160 5.22e-50 169
MS.gene012092.t1 AT4G27410 47.305 167 75 3 5 171 14 167 8.41e-50 168
MS.gene012092.t1 AT3G15500 46.784 171 78 3 4 174 13 170 2.09e-49 168
MS.gene012092.t1 AT3G10480 44.382 178 87 3 3 180 25 190 5.22e-49 170
MS.gene012092.t1 AT3G04070 46.746 169 79 4 3 166 8 170 9.80e-49 167
MS.gene012092.t1 AT2G43000 47.647 170 73 3 7 174 20 175 1.02e-48 165
MS.gene012092.t1 AT5G39820 42.473 186 89 5 2 173 17 198 1.58e-48 166
MS.gene012092.t1 AT3G15510 45.665 173 86 4 9 177 21 189 4.20e-48 166
MS.gene012092.t1 AT1G52890 45.882 170 79 3 5 174 14 170 6.06e-48 164
MS.gene012092.t1 AT5G04410 43.478 184 92 4 3 186 7 178 8.24e-48 169
MS.gene012092.t1 AT3G04070 52.941 136 56 2 3 133 8 140 6.76e-47 162
MS.gene012092.t1 AT2G33480 46.667 165 72 2 5 169 15 163 8.62e-47 160
MS.gene012092.t1 AT1G26870 43.750 176 91 4 1 173 12 182 1.03e-46 164
MS.gene012092.t1 AT3G10500 44.910 167 81 3 3 169 7 162 1.17e-46 166
MS.gene012092.t1 AT4G27410 44.199 181 77 4 5 171 14 184 2.53e-46 160
MS.gene012092.t1 AT2G33480 46.061 165 71 2 5 169 15 161 3.19e-46 158
MS.gene012092.t1 AT5G24590 49.112 169 74 3 5 172 13 170 3.74e-46 163
MS.gene012092.t1 AT4G28530 47.514 181 58 7 5 166 10 172 4.18e-46 160
MS.gene012092.t1 AT1G32510 42.458 179 86 4 3 174 4 172 6.10e-46 158
MS.gene012092.t1 AT1G33060 42.500 200 93 5 4 199 23 204 7.63e-46 165
MS.gene012092.t1 AT1G33060 42.500 200 93 5 4 199 23 204 8.18e-46 165
MS.gene012092.t1 AT5G13180 48.485 165 66 4 5 167 14 161 1.95e-45 155
MS.gene012092.t1 AT4G35580 49.701 167 70 5 1 166 6 159 7.90e-45 160
MS.gene012092.t1 AT3G10480 35.897 234 105 5 3 203 25 246 8.29e-45 160
MS.gene012092.t1 AT4G35580 49.701 167 70 5 1 166 6 159 1.01e-44 160
MS.gene012092.t1 AT4G35580 49.701 167 70 5 1 166 6 159 1.11e-44 160
MS.gene012092.t1 AT3G49530 43.017 179 84 4 5 179 13 177 4.91e-44 156
MS.gene012092.t1 AT3G49530 43.017 179 84 4 5 179 13 177 1.25e-43 156
MS.gene012092.t1 AT5G64060 36.404 228 115 5 7 205 8 234 3.30e-43 153
MS.gene012092.t1 AT2G27300 39.130 184 92 4 3 186 12 175 3.46e-43 152
MS.gene012092.t1 AT3G12910 46.591 176 81 6 7 174 23 193 4.76e-42 148
MS.gene012092.t1 AT2G17040 37.209 215 105 4 7 209 8 204 5.01e-42 147
MS.gene012092.t1 AT1G34180 40.936 171 82 4 7 159 18 187 7.25e-42 151
MS.gene012092.t1 AT1G34190 31.724 290 154 9 7 260 18 299 2.00e-41 152
MS.gene012092.t1 AT1G52880 44.379 169 85 3 9 173 21 184 2.96e-41 147
MS.gene012092.t1 AT1G34180 40.936 171 82 4 7 159 18 187 3.10e-41 152
MS.gene012092.t1 AT5G09330 43.125 160 80 2 7 166 8 156 3.54e-41 150
MS.gene012092.t1 AT5G09330 43.125 160 80 2 7 166 8 156 3.54e-41 150
MS.gene012092.t1 AT5G09330 43.125 160 80 2 7 166 8 156 3.54e-41 150
MS.gene012092.t1 AT5G09330 43.125 160 80 2 7 166 8 156 3.54e-41 150
MS.gene012092.t1 AT5G09330 43.125 160 80 2 7 166 8 156 3.54e-41 150
MS.gene012092.t1 AT2G02450 50.382 131 61 2 4 133 50 177 3.67e-41 148
MS.gene012092.t1 AT2G02450 50.382 131 61 2 4 133 50 177 4.95e-41 148
MS.gene012092.t1 AT5G22290 46.269 134 70 1 3 136 19 150 1.76e-40 145
MS.gene012092.t1 AT1G34180 39.011 182 82 5 7 159 18 199 4.45e-40 147
MS.gene012092.t1 AT1G34180 39.011 182 82 5 7 159 18 199 1.79e-39 147
MS.gene012092.t1 AT3G44290 45.600 125 66 1 7 131 16 138 3.31e-39 139
MS.gene012092.t1 AT3G44290 45.600 125 66 1 7 131 16 138 1.45e-38 140
MS.gene012092.t1 AT1G56010 48.855 131 55 4 63 192 8 127 8.16e-38 136
MS.gene012092.t1 AT5G04395 44.444 153 72 3 2 141 25 177 9.56e-38 134
MS.gene012092.t1 AT5G61430 55.046 109 35 2 61 166 6 103 1.28e-36 133
MS.gene012092.t1 AT3G12977 49.587 121 47 3 50 169 10 117 3.88e-35 128
MS.gene012092.t1 AT1G32870 47.287 129 65 2 5 133 10 135 6.62e-34 131
MS.gene012092.t1 AT1G32870 47.287 129 65 2 5 133 10 135 8.64e-34 130
MS.gene012092.t1 AT1G32870 47.287 129 65 2 5 133 46 171 1.13e-33 130
MS.gene012092.t1 AT2G33480 44.737 114 53 1 56 169 3 106 1.11e-28 110
MS.gene012092.t1 AT3G44350 37.427 171 89 7 8 172 8 166 1.74e-27 108
MS.gene012092.t1 AT3G44350 42.029 138 69 6 8 139 8 140 4.94e-27 104
MS.gene012092.t1 AT5G22380 42.754 138 69 5 1 131 1 135 6.51e-27 106
MS.gene012092.t1 AT1G02250 39.877 163 75 7 6 163 4 148 2.64e-25 105
MS.gene012092.t1 AT4G28530 43.939 132 51 5 5 117 10 137 1.28e-24 102
MS.gene012092.t1 AT4G01520 30.918 207 120 6 6 207 5 193 3.35e-24 100
MS.gene012092.t1 AT1G02230 44.275 131 64 6 6 131 4 130 2.92e-23 99.4
MS.gene012092.t1 AT5G64530 39.695 131 62 5 5 133 3 118 4.91e-23 94.0
MS.gene012092.t1 AT4G01540 31.220 205 118 6 8 207 7 193 5.17e-23 99.4
MS.gene012092.t1 AT4G01540 31.220 205 118 6 8 207 7 193 5.41e-23 99.0
MS.gene012092.t1 AT3G04420 39.535 129 73 3 6 131 4 130 5.72e-23 97.4
MS.gene012092.t1 AT4G01540 31.220 205 118 6 8 207 7 193 6.64e-23 99.0
MS.gene012092.t1 AT5G64530 32.749 171 94 6 5 169 3 158 6.85e-23 94.7
MS.gene012092.t1 AT4G01540 31.220 205 118 6 8 207 7 193 7.28e-23 99.4
MS.gene012092.t1 AT3G04420 39.535 129 73 3 6 131 4 130 1.79e-22 97.1
MS.gene012092.t1 AT4G01550 26.909 275 162 9 8 270 7 254 8.06e-22 96.3
MS.gene012092.t1 AT2G43000 42.991 107 48 2 70 174 2 97 6.01e-21 89.7
MS.gene012092.t1 AT3G10490 33.562 146 85 4 81 225 2 136 1.70e-20 91.3
MS.gene012092.t1 AT3G10490 33.562 146 85 4 81 225 2 136 1.70e-20 91.3
MS.gene012092.t1 AT1G01010 34.532 139 78 5 8 136 6 141 3.14e-19 88.6
MS.gene012092.t1 AT5G50820 37.681 138 61 5 5 133 17 138 1.42e-18 82.8
MS.gene012092.t1 AT1G02220 37.692 130 73 4 5 131 3 127 2.35e-18 85.9
MS.gene012092.t1 AT3G56530 29.927 137 92 2 4 138 51 185 2.73e-17 81.6
MS.gene012092.t1 AT5G14000 29.927 137 89 2 5 139 15 146 6.17e-15 72.0
MS.gene012092.t1 AT5G14000 29.927 137 89 2 5 139 15 146 4.93e-14 70.5
MS.gene012092.t1 AT5G22290 54.000 50 23 0 87 136 2 51 9.78e-14 70.5
MS.gene012092.t1 AT3G55210 28.671 143 87 4 5 134 11 151 7.39e-13 68.6

Find 69 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAATAATGAATTTCAAAA+TGG 0.248762 8.4:+29419005 MS.gene012092:CDS
TTGTTATGTTCTGATATTAT+TGG 0.276778 8.4:-29418987 None:intergenic
TAAATTGAGTGTTCCCTTGC+AGG 0.291208 8.4:+29418662 MS.gene012092:CDS
GAGCTACAATGGCAGGGTTC+TGG 0.317074 8.4:+29416524 MS.gene012092:CDS
TATACAGAGAGATGTAGAAT+TGG 0.372773 8.4:+29416427 MS.gene012092:intron
ATTGGATCATGCATGAATAT+AGG 0.391373 8.4:+29416653 MS.gene012092:CDS
TCCCTTGCAGGAAGAAGGTT+GGG 0.394830 8.4:+29418674 MS.gene012092:CDS
AAAGAGAGAAAGTGACTGAT+TGG 0.431747 8.4:+29419051 MS.gene012092:CDS
CATGTGTCCCACCTGGATTT+CGG 0.432093 8.4:+29415789 MS.gene012092:CDS
GTTCCTACTTCAAAGTAGTA+AGG 0.437560 8.4:+29419151 MS.gene012092:CDS
CCAACGGATGGAGAGCTTGT+TGG 0.439284 8.4:+29415818 MS.gene012092:CDS
AAAGATAAGAAATATCCAAC+AGG 0.439866 8.4:+29416487 MS.gene012092:CDS
AGTTGAGTCAAGAAGATCAT+AGG 0.449602 8.4:+29419102 MS.gene012092:CDS
GAGGGATCTTGACAAGTTTG+TGG 0.454746 8.4:+29419073 MS.gene012092:CDS
TATGAACGAACAAAACTGAT+TGG 0.456318 8.4:+29416574 MS.gene012092:CDS
CATCCTTACTACTTTGAAGT+AGG 0.458330 8.4:-29419154 None:intergenic
ACGAATAGAGCTACAATGGC+AGG 0.459411 8.4:+29416517 MS.gene012092:CDS
CTTCATGCATTCAGAACAAA+TGG 0.460408 8.4:+29418911 MS.gene012092:CDS
AGTGTTCCCTTGCAGGAAGA+AGG 0.464909 8.4:+29418669 MS.gene012092:CDS
TGTCTTAAGATGAGGTCAAT+GGG 0.475675 8.4:-29418810 None:intergenic
ATACACCGACTTATCTCTTC+CGG 0.477433 8.4:-29416554 None:intergenic
ATACAGAGAGATGTAGAATT+GGG 0.482735 8.4:+29416428 MS.gene012092:intron
CTATTCGTTCTCGTCCCTGT+TGG 0.488529 8.4:-29416502 None:intergenic
TACAAAGGAAGAGCACCTAA+TGG 0.488869 8.4:+29416619 MS.gene012092:CDS
CTAATGGACAGAAAACTGAT+TGG 0.497399 8.4:+29416635 MS.gene012092:CDS
GAGATGTAGAATTGGGAATG+AGG 0.500296 8.4:+29416435 MS.gene012092:CDS
GCAGGGTTCTGGAAAGCAAC+CGG 0.508647 8.4:+29416535 MS.gene012092:CDS
GTTGGGTGGAACCGAAATCC+AGG 0.510577 8.4:-29415800 None:intergenic
TTCCCTTGCAGGAAGAAGGT+TGG 0.510912 8.4:+29418673 MS.gene012092:CDS
ACAAATGAAAGATGGGATCC+AGG 0.514083 8.4:+29418741 MS.gene012092:CDS
TTGTCTTAAGATGAGGTCAA+TGG 0.515328 8.4:-29418811 None:intergenic
CAACAAGCTCTCCATCCGTT+GGG 0.524228 8.4:-29415817 None:intergenic
GAGAGAAAGTGACTGATTGG+AGG 0.524381 8.4:+29419054 MS.gene012092:CDS
AACCCAACCTTCTTCCTGCA+AGG 0.524953 8.4:-29418676 None:intergenic
TAATATACCTTGGAGATCCC+AGG 0.527193 8.4:-29415921 None:intergenic
ATCTATACCGTATTGAACCC+TGG 0.527609 8.4:+29415903 MS.gene012092:CDS
TCTATACCGTATTGAACCCT+GGG 0.534125 8.4:+29415904 MS.gene012092:CDS
AATGGGGTCCACCCTTGAGA+TGG 0.540085 8.4:-29418793 None:intergenic
TTTCGGTTCCACCCAACGGA+TGG 0.543349 8.4:+29415806 MS.gene012092:CDS
AGTTGAAAATGCACCTCCAC+AGG 0.544633 8.4:+29416684 MS.gene012092:CDS
CCAACAAGCTCTCCATCCGT+TGG 0.549429 8.4:-29415818 None:intergenic
GGACTTTCTAGCTGAGGAAG+AGG 0.549801 8.4:-29418936 None:intergenic
AAACAAGTAGCACCATCTCA+AGG 0.557359 8.4:+29418781 MS.gene012092:CDS
ACAAGGTCAGATTGTGACAT+TGG 0.564455 8.4:+29419209 MS.gene012092:CDS
TGTTCATCATATAAGTGACC+TGG 0.567839 8.4:-29418759 None:intergenic
AAAGTCCCTCTTTAACAAAG+AGG 0.569473 8.4:+29418952 MS.gene012092:CDS
ATGGAGTCATGTGTCCCACC+TGG 0.583453 8.4:+29415782 MS.gene012092:CDS
AGAGAAAGTGACTGATTGGA+GGG 0.585369 8.4:+29419055 MS.gene012092:CDS
GAACAAAACTGATTGGAATG+AGG 0.589039 8.4:+29416581 MS.gene012092:CDS
TCTGTGGTTGTCTTAAGATG+AGG 0.591566 8.4:-29418818 None:intergenic
ACCCAACCTTCTTCCTGCAA+GGG 0.597920 8.4:-29418675 None:intergenic
TGGATTTCGGTTCCACCCAA+CGG 0.599891 8.4:+29415802 MS.gene012092:CDS
GGAGATCCCAGGGTTCAATA+CGG 0.603085 8.4:-29415910 None:intergenic
AAAGAGGGACTTTCTAGCTG+AGG 0.604723 8.4:-29418942 None:intergenic
CAAGCTCTCCATCCGTTGGG+TGG 0.610660 8.4:-29415814 None:intergenic
AACAAGTAGCACCATCTCAA+GGG 0.618907 8.4:+29418782 MS.gene012092:CDS
AATATACCTTGGAGATCCCA+GGG 0.622309 8.4:-29415920 None:intergenic
AGCAACCGGAAGAGATAAGT+CGG 0.630743 8.4:+29416549 MS.gene012092:CDS
ATTGAACCCTGGGATCTCCA+AGG 0.636482 8.4:+29415914 MS.gene012092:CDS
CGAATAGAGCTACAATGGCA+GGG 0.643373 8.4:+29416518 MS.gene012092:CDS
GAGAACGAATAGAGCTACAA+TGG 0.650530 8.4:+29416513 MS.gene012092:CDS
TATATGTATATACTTGCCTG+TGG 0.651237 8.4:-29416700 None:intergenic
AAGTAGCACCATCTCAAGGG+TGG 0.666198 8.4:+29418785 MS.gene012092:CDS
GGGTGGAACCGAAATCCAGG+TGG 0.677530 8.4:-29415797 None:intergenic
GTCTTAAGATGAGGTCAATG+GGG 0.688746 8.4:-29418809 None:intergenic
GGTGGAACCGAAATCCAGGT+GGG 0.699498 8.4:-29415796 None:intergenic
GGAATGAGGAGCAACATGAG+TGG 0.701564 8.4:+29416449 MS.gene012092:CDS
ATGTATATACTTGCCTGTGG+AGG 0.709573 8.4:-29416697 None:intergenic
AAGATAAGAAATATCCAACA+GGG 0.735024 8.4:+29416488 MS.gene012092:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTATTTTATTTTATAT+AGG - chr8.4:29417481-29417500 None:intergenic 0.0%
!! AAATGAATAAAAATAAAAGA+AGG - chr8.4:29417770-29417789 None:intergenic 10.0%
!! AGAAAAAAATTTAATTCAAA+AGG + chr8.4:29418576-29418595 MS.gene012092:intron 10.0%
!! TATTTAATTAATTAATCAAG+GGG - chr8.4:29416795-29416814 None:intergenic 10.0%
!!! AATTATCATAAGTTTTTTTT+TGG + chr8.4:29418505-29418524 MS.gene012092:intron 10.0%
!!! CATTAAAAAAAATCTAATTT+TGG + chr8.4:29417716-29417735 MS.gene012092:intron 10.0%
!!! TTGTTTAAAACTTTTTAAAT+TGG - chr8.4:29418043-29418062 None:intergenic 10.0%
!! AAAAAAAGTTGAAATATTGA+CGG + chr8.4:29416132-29416151 MS.gene012092:intron 15.0%
!! AACAAATACATTAATTAGTT+TGG - chr8.4:29418210-29418229 None:intergenic 15.0%
!! AACAATAATGAATTTCAAAA+TGG + chr8.4:29419005-29419024 MS.gene012092:CDS 15.0%
!! ACACAATATATGTAAAAAAA+TGG - chr8.4:29417555-29417574 None:intergenic 15.0%
!! ATTGTGTTAAATTTATCAAT+AGG + chr8.4:29418085-29418104 MS.gene012092:intron 15.0%
!! TAAGTCAAATAAAATACAAT+CGG - chr8.4:29417833-29417852 None:intergenic 15.0%
!! TCTCTTAAATGTTAATTATT+TGG + chr8.4:29417511-29417530 MS.gene012092:intron 15.0%
!! TTATTTAAAGGTGAATATTT+CGG + chr8.4:29418408-29418427 MS.gene012092:intron 15.0%
!!! AAAAAATGGTTTTTTTTTCT+AGG - chr8.4:29417541-29417560 None:intergenic 15.0%
!!! AAAAGTATACATATATTGAT+AGG + chr8.4:29416391-29416410 MS.gene012092:intron 15.0%
!!! ATTTTTATTCATTTTAAGGA+TGG + chr8.4:29417776-29417795 MS.gene012092:intron 15.0%
!!! CATCATTAGTTTTATTTTTT+AGG + chr8.4:29417246-29417265 MS.gene012092:intron 15.0%
!!! GTGTTAATAACTTTATTTAA+CGG + chr8.4:29418251-29418270 MS.gene012092:intron 15.0%
!!! TCAACTAAAATGTTTTATTA+TGG + chr8.4:29417330-29417349 MS.gene012092:intron 15.0%
!!! TTTATGTTCTAGTAATTTTT+TGG - chr8.4:29418547-29418566 None:intergenic 15.0%
!! AAACTTTGCAAAAGTTAAAA+GGG + chr8.4:29417896-29417915 MS.gene012092:intron 20.0%
!! AAAGACAATAATTGATTAAG+TGG - chr8.4:29418157-29418176 None:intergenic 20.0%
!! AACCCGAATTAATTTAAATT+CGG - chr8.4:29418440-29418459 None:intergenic 20.0%
!! AACCCGAATTTAAATTAATT+CGG + chr8.4:29418434-29418453 MS.gene012092:intron 20.0%
!! AATACTATAAAGTACAACTT+TGG + chr8.4:29417040-29417059 MS.gene012092:intron 20.0%
!! GTAATATAAGTAATATACCT+TGG - chr8.4:29415934-29415953 None:intergenic 20.0%
!! TATAGAAGTCTTGATTTAAA+GGG + chr8.4:29416913-29416932 MS.gene012092:intron 20.0%
!! TATTTAAAGGTGAATATTTC+GGG + chr8.4:29418409-29418428 MS.gene012092:intron 20.0%
!! TTACGAATATTGTTAATTAG+TGG - chr8.4:29417070-29417089 None:intergenic 20.0%
!! TTATAGAAGTCTTGATTTAA+AGG + chr8.4:29416912-29416931 MS.gene012092:intron 20.0%
!! TTGTTATGTTCTGATATTAT+TGG - chr8.4:29418990-29419009 None:intergenic 20.0%
!! TTTAAACAAGAACACAAAAT+AGG - chr8.4:29416374-29416393 None:intergenic 20.0%
!!! ATCATCTTTCTTTTACTTTT+TGG + chr8.4:29417196-29417215 MS.gene012092:intron 20.0%
!!! CTAAAATGTTTTATTATGGA+TGG + chr8.4:29417334-29417353 MS.gene012092:intron 20.0%
!!! GGATTGTATTGTATTTTTAT+TGG + chr8.4:29417594-29417613 MS.gene012092:intron 20.0%
!!! GTTGCATTTTTAGTTTTTTA+CGG + chr8.4:29417573-29417592 MS.gene012092:intron 20.0%
! AAAAAACCTTTACCCTTAAA+AGG - chr8.4:29417676-29417695 None:intergenic 25.0%
! AAAGATAAGAAATATCCAAC+AGG + chr8.4:29416487-29416506 MS.gene012092:CDS 25.0%
! AACTTTGCAAAAGTTAAAAG+GGG + chr8.4:29417897-29417916 MS.gene012092:intron 25.0%
! AAGATAAGAAATATCCAACA+GGG + chr8.4:29416488-29416507 MS.gene012092:CDS 25.0%
! AAGCAAAAACAAATGAAAGA+TGG + chr8.4:29418733-29418752 MS.gene012092:CDS 25.0%
! AATCAGTTGATCTTGATTAA+TGG - chr8.4:29417382-29417401 None:intergenic 25.0%
! AATTCATTCGTTAGAGAATT+AGG - chr8.4:29417445-29417464 None:intergenic 25.0%
! ACCCGAATTAATTTAAATTC+GGG - chr8.4:29418439-29418458 None:intergenic 25.0%
! ACCCGAATTTAAATTAATTC+GGG + chr8.4:29418435-29418454 MS.gene012092:intron 25.0%
! AGCAAAAACAAATGAAAGAT+GGG + chr8.4:29418734-29418753 MS.gene012092:CDS 25.0%
! GAAACTTTGCAAAAGTTAAA+AGG + chr8.4:29417895-29417914 MS.gene012092:intron 25.0%
! TCAAACTTGATTAGTAACTT+TGG + chr8.4:29416760-29416779 MS.gene012092:intron 25.0%
! TCAACTCAACACATAATATA+TGG - chr8.4:29416734-29416753 None:intergenic 25.0%
! TGTTAAAACCCTAATCAATA+GGG - chr8.4:29416335-29416354 None:intergenic 25.0%
! TTCGTAAATAATATTCACCA+AGG + chr8.4:29417083-29417102 MS.gene012092:intron 25.0%
!! AAGCTCACACATTTTAAATA+TGG - chr8.4:29418356-29418375 None:intergenic 25.0%
!! ACATTTTAAATATGGAGAAG+TGG - chr8.4:29418348-29418367 None:intergenic 25.0%
!! ATTTTAAATATGGAGAAGTG+GGG - chr8.4:29418346-29418365 None:intergenic 25.0%
!! CATTTTAAATATGGAGAAGT+GGG - chr8.4:29418347-29418366 None:intergenic 25.0%
!! TATTTTATGCGTTACTCTAT+AGG - chr8.4:29416298-29416317 None:intergenic 25.0%
!! TCATTAGATGATCCTTTTAT+TGG + chr8.4:29417807-29417826 MS.gene012092:intron 25.0%
!! TGTTTGTACATGAAATTTTG+AGG - chr8.4:29418852-29418871 None:intergenic 25.0%
!! TTTTATTGGAGTGACAAAAA+AGG + chr8.4:29417608-29417627 MS.gene012092:intron 25.0%
!!! ATCTTTCATTTGTTTTTGCT+TGG - chr8.4:29418734-29418753 None:intergenic 25.0%
!!! ATGATGTTTTGAATGTGAAA+AGG - chr8.4:29417947-29417966 None:intergenic 25.0%
!!! TAAGCTCATTTTTAACTACA+AGG + chr8.4:29419192-29419211 MS.gene012092:CDS 25.0%
AAAAAAGTTTGTACGTACCT+TGG - chr8.4:29417103-29417122 None:intergenic 30.0%
AAATACAATCGGCCAATAAA+AGG - chr8.4:29417822-29417841 None:intergenic 30.0%
ACGTTATAAAACGAGTTTAG+AGG - chr8.4:29417017-29417036 None:intergenic 30.0%
ACTTTGCAAAAGTTAAAAGG+GGG + chr8.4:29417898-29417917 MS.gene012092:intron 30.0%
AGACTTAAATTTAGAGACGA+AGG - chr8.4:29418013-29418032 None:intergenic 30.0%
ATACAGAGAGATGTAGAATT+GGG + chr8.4:29416428-29416447 MS.gene012092:intron 30.0%
ATTGGATCATGCATGAATAT+AGG + chr8.4:29416653-29416672 MS.gene012092:CDS 30.0%
CAAAAGGAGTTTAGAGAAAA+TGG + chr8.4:29418592-29418611 MS.gene012092:intron 30.0%
CTGTTAAAACCCTAATCAAT+AGG - chr8.4:29416336-29416355 None:intergenic 30.0%
GTTTAGTCTAAGCATTTGAT+TGG + chr8.4:29416989-29417008 MS.gene012092:intron 30.0%
TATACAGAGAGATGTAGAAT+TGG + chr8.4:29416427-29416446 MS.gene012092:intron 30.0%
TATATGTATATACTTGCCTG+TGG - chr8.4:29416703-29416722 None:intergenic 30.0%
TATGAACGAACAAAACTGAT+TGG + chr8.4:29416574-29416593 MS.gene012092:CDS 30.0%
TATGTGTGTGTATATATGTG+TGG - chr8.4:29417650-29417669 None:intergenic 30.0%
TGCATAATATATGCAGAAGT+CGG + chr8.4:29418307-29418326 MS.gene012092:intron 30.0%
! ACAAGGATGTTTCTATAAGT+TGG + chr8.4:29416861-29416880 MS.gene012092:intron 30.0%
! ACACACATATTGCCTTTTAA+GGG + chr8.4:29417661-29417680 MS.gene012092:intron 30.0%
! TTGATCAACCCTATTGATTA+GGG + chr8.4:29416324-29416343 MS.gene012092:intron 30.0%
! TTGCAAAGTTTCAGTCTTTT+TGG - chr8.4:29417887-29417906 None:intergenic 30.0%
! TTTGATCAACCCTATTGATT+AGG + chr8.4:29416323-29416342 MS.gene012092:intron 30.0%
! TTTTGCCTCTTTGTTAAAGA+GGG - chr8.4:29418960-29418979 None:intergenic 30.0%
!! ATATTGCCTTTTAAGGGTAA+AGG + chr8.4:29417667-29417686 MS.gene012092:intron 30.0%
!! CTTGTTTTCTTGTCTGAAAA+AGG - chr8.4:29416846-29416865 None:intergenic 30.0%
!!! ACGTACAAACTTTTTTGCTA+GGG + chr8.4:29417107-29417126 MS.gene012092:intron 30.0%
!!! CTTTTTCAGACAAGAAAACA+AGG + chr8.4:29416844-29416863 MS.gene012092:intron 30.0%
!!! TACGTACAAACTTTTTTGCT+AGG + chr8.4:29417106-29417125 MS.gene012092:intron 30.0%
AAAGAGAGAAAGTGACTGAT+TGG + chr8.4:29419051-29419070 MS.gene012092:CDS 35.0%
AAAGTCCCTCTTTAACAAAG+AGG + chr8.4:29418952-29418971 MS.gene012092:CDS 35.0%
AACCATGTTCAACATAGTGA+TGG + chr8.4:29415997-29416016 MS.gene012092:intron 35.0%
AGTTGAGTCAAGAAGATCAT+AGG + chr8.4:29419102-29419121 MS.gene012092:CDS 35.0%
CATAATATATGCAGAAGTCG+GGG + chr8.4:29418309-29418328 MS.gene012092:intron 35.0%
CTTCATGCATTCAGAACAAA+TGG + chr8.4:29418911-29418930 MS.gene012092:CDS 35.0%
GAAAAAGACACATCAAGAGA+AGG - chr8.4:29416959-29416978 None:intergenic 35.0%
GAACAAAACTGATTGGAATG+AGG + chr8.4:29416581-29416600 MS.gene012092:CDS 35.0%
GCATAATATATGCAGAAGTC+GGG + chr8.4:29418308-29418327 MS.gene012092:intron 35.0%
GTTCCTACTTCAAAGTAGTA+AGG + chr8.4:29419151-29419170 MS.gene012092:CDS 35.0%
TACCATCACTATGTTGAACA+TGG - chr8.4:29416002-29416021 None:intergenic 35.0%
TGTCTTAAGATGAGGTCAAT+GGG - chr8.4:29418813-29418832 None:intergenic 35.0%
TGTTCATCATATAAGTGACC+TGG - chr8.4:29418762-29418781 None:intergenic 35.0%
TTGTCTTAAGATGAGGTCAA+TGG - chr8.4:29418814-29418833 None:intergenic 35.0%
! AAGACACTCGTTTTCTACAA+AGG + chr8.4:29416604-29416623 MS.gene012092:CDS 35.0%
! CAATCAGTTTTCTGTCCATT+AGG - chr8.4:29416637-29416656 None:intergenic 35.0%
! CACACACATATTGCCTTTTA+AGG + chr8.4:29417660-29417679 MS.gene012092:intron 35.0%
! CTAATGGACAGAAAACTGAT+TGG + chr8.4:29416635-29416654 MS.gene012092:CDS 35.0%
! GTTTTGCCTCTTTGTTAAAG+AGG - chr8.4:29418961-29418980 None:intergenic 35.0%
! TATAAGTTGGAGAATGAGCA+TGG + chr8.4:29416874-29416893 MS.gene012092:intron 35.0%
!! CATCCTTACTACTTTGAAGT+AGG - chr8.4:29419157-29419176 None:intergenic 35.0%
!!! AGGGTAAAGGTTTTTTTCTC+AGG + chr8.4:29417680-29417699 MS.gene012092:intron 35.0%
!!! AGTGACTTTTGACTTCTTTC+TGG - chr8.4:29417151-29417170 None:intergenic 35.0%
!!! TTTTGAGGTGAAATCTTCTG+TGG - chr8.4:29418837-29418856 None:intergenic 35.0%
AAACAAGTAGCACCATCTCA+AGG + chr8.4:29418781-29418800 MS.gene012092:CDS 40.0%
AACAAGTAGCACCATCTCAA+GGG + chr8.4:29418782-29418801 MS.gene012092:CDS 40.0%
AATATACCTTGGAGATCCCA+GGG - chr8.4:29415923-29415942 None:intergenic 40.0%
ACAAATGAAAGATGGGATCC+AGG + chr8.4:29418741-29418760 MS.gene012092:CDS 40.0%
ACAAGGTCAGATTGTGACAT+TGG + chr8.4:29419209-29419228 MS.gene012092:CDS 40.0%
AGAGAAAGTGACTGATTGGA+GGG + chr8.4:29419055-29419074 MS.gene012092:CDS 40.0%
ATCTATACCGTATTGAACCC+TGG + chr8.4:29415903-29415922 MS.gene012092:CDS 40.0%
ATGTATATACTTGCCTGTGG+AGG - chr8.4:29416700-29416719 None:intergenic 40.0%
GAGAACGAATAGAGCTACAA+TGG + chr8.4:29416513-29416532 MS.gene012092:CDS 40.0%
GAGATGTAGAATTGGGAATG+AGG + chr8.4:29416435-29416454 MS.gene012092:CDS 40.0%
GTCTTAAGATGAGGTCAATG+GGG - chr8.4:29418812-29418831 None:intergenic 40.0%
TAAATTGAGTGTTCCCTTGC+AGG + chr8.4:29418662-29418681 MS.gene012092:CDS 40.0%
TAATATACCTTGGAGATCCC+AGG - chr8.4:29415924-29415943 None:intergenic 40.0%
TATCAACTGAGCTAAGGTCA+CGG - chr8.4:29418280-29418299 None:intergenic 40.0%
TCTATACCGTATTGAACCCT+GGG + chr8.4:29415904-29415923 MS.gene012092:CDS 40.0%
TCTGTGGTTGTCTTAAGATG+AGG - chr8.4:29418821-29418840 None:intergenic 40.0%
! TGACCTTAGCTCAGTTGATA+GGG + chr8.4:29418280-29418299 MS.gene012092:intron 40.0%
!! ATACACCGACTTATCTCTTC+CGG - chr8.4:29416557-29416576 None:intergenic 40.0%
!! TACAAAGGAAGAGCACCTAA+TGG + chr8.4:29416619-29416638 MS.gene012092:CDS 40.0%
!!! GGTTAGAGAGTTTTGAAGAG+AGG + chr8.4:29417267-29417286 MS.gene012092:intron 40.0%
ACGAATAGAGCTACAATGGC+AGG + chr8.4:29416517-29416536 MS.gene012092:CDS 45.0%
AGCAACCGGAAGAGATAAGT+CGG + chr8.4:29416549-29416568 MS.gene012092:CDS 45.0%
AGTTGAAAATGCACCTCCAC+AGG + chr8.4:29416684-29416703 MS.gene012092:CDS 45.0%
ATCAACTGAGCTAAGGTCAC+GGG - chr8.4:29418279-29418298 None:intergenic 45.0%
ATGTGTGAGCTTCAGTCACT+AGG + chr8.4:29418364-29418383 MS.gene012092:intron 45.0%
CGAATAGAGCTACAATGGCA+GGG + chr8.4:29416518-29416537 MS.gene012092:CDS 45.0%
GAGAGAAAGTGACTGATTGG+AGG + chr8.4:29419054-29419073 MS.gene012092:CDS 45.0%
GAGGGATCTTGACAAGTTTG+TGG + chr8.4:29419073-29419092 MS.gene012092:CDS 45.0%
GCTGAGATCACTAACTAGAG+AGG - chr8.4:29417360-29417379 None:intergenic 45.0%
GTGACCTTAGCTCAGTTGAT+AGG + chr8.4:29418279-29418298 MS.gene012092:intron 45.0%
TGTCCCTATCAACTGAGCTA+AGG - chr8.4:29418286-29418305 None:intergenic 45.0%
! ATATGGAGAAGTGGGGTATC+CGG - chr8.4:29418339-29418358 None:intergenic 45.0%
!! AAAGAGGGACTTTCTAGCTG+AGG - chr8.4:29418945-29418964 None:intergenic 45.0%
!! AATATTTAATTAATTAATCA+AGG - chr8.4:29416797-29416816 None:intergenic 5.0%
!! ATATTTAATTAATTAATCAA+GGG - chr8.4:29416796-29416815 None:intergenic 5.0%
!!! AAAAAAAAAACTTTATTTAA+AGG + chr8.4:29418396-29418415 MS.gene012092:intron 5.0%
!!! TTTTATTTTTATTCATTTTA+AGG + chr8.4:29417772-29417791 MS.gene012092:intron 5.0%
AACCCAACCTTCTTCCTGCA+AGG - chr8.4:29418679-29418698 None:intergenic 50.0%
AAGTAGCACCATCTCAAGGG+TGG + chr8.4:29418785-29418804 MS.gene012092:CDS 50.0%
ACCCAACCTTCTTCCTGCAA+GGG - chr8.4:29418678-29418697 None:intergenic 50.0%
AGTGTTCCCTTGCAGGAAGA+AGG + chr8.4:29418669-29418688 MS.gene012092:CDS 50.0%
ATTGAACCCTGGGATCTCCA+AGG + chr8.4:29415914-29415933 MS.gene012092:CDS 50.0%
CAACAAGCTCTCCATCCGTT+GGG - chr8.4:29415820-29415839 None:intergenic 50.0%
CATGTGTCCCACCTGGATTT+CGG + chr8.4:29415789-29415808 MS.gene012092:CDS 50.0%
CTATTCGTTCTCGTCCCTGT+TGG - chr8.4:29416505-29416524 None:intergenic 50.0%
GGAATGAGGAGCAACATGAG+TGG + chr8.4:29416449-29416468 MS.gene012092:CDS 50.0%
GGAGATCCCAGGGTTCAATA+CGG - chr8.4:29415913-29415932 None:intergenic 50.0%
TCAACTGAGCTAAGGTCACG+GGG - chr8.4:29418278-29418297 None:intergenic 50.0%
TCCCTTGCAGGAAGAAGGTT+GGG + chr8.4:29418674-29418693 MS.gene012092:CDS 50.0%
TGGATTTCGGTTCCACCCAA+CGG + chr8.4:29415802-29415821 MS.gene012092:CDS 50.0%
TTCCCTTGCAGGAAGAAGGT+TGG + chr8.4:29418673-29418692 MS.gene012092:CDS 50.0%
! TATGGAGAAGTGGGGTATCC+GGG - chr8.4:29418338-29418357 None:intergenic 50.0%
!! GGACTTTCTAGCTGAGGAAG+AGG - chr8.4:29418939-29418958 None:intergenic 50.0%
AATGGGGTCCACCCTTGAGA+TGG - chr8.4:29418796-29418815 None:intergenic 55.0%
ATGCAGAAGTCGGGGAATCC+CGG + chr8.4:29418317-29418336 MS.gene012092:intron 55.0%
ATGGAGTCATGTGTCCCACC+TGG + chr8.4:29415782-29415801 MS.gene012092:CDS 55.0%
CCAACAAGCTCTCCATCCGT+TGG - chr8.4:29415821-29415840 None:intergenic 55.0%
CCAACGGATGGAGAGCTTGT+TGG + chr8.4:29415818-29415837 MS.gene012092:CDS 55.0%
GAGCTACAATGGCAGGGTTC+TGG + chr8.4:29416524-29416543 MS.gene012092:CDS 55.0%
GGTGGAACCGAAATCCAGGT+GGG - chr8.4:29415799-29415818 None:intergenic 55.0%
GTTGGGTGGAACCGAAATCC+AGG - chr8.4:29415803-29415822 None:intergenic 55.0%
TTTCGGTTCCACCCAACGGA+TGG + chr8.4:29415806-29415825 MS.gene012092:CDS 55.0%
!! GCAGGGTTCTGGAAAGCAAC+CGG + chr8.4:29416535-29416554 MS.gene012092:CDS 55.0%
CAAGCTCTCCATCCGTTGGG+TGG - chr8.4:29415817-29415836 None:intergenic 60.0%
GGGTGGAACCGAAATCCAGG+TGG - chr8.4:29415800-29415819 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 29415782 29419253 29415782 ID=MS.gene012092
chr8.4 mRNA 29415782 29419253 29415782 ID=MS.gene012092.t1;Parent=MS.gene012092
chr8.4 exon 29415782 29415935 29415782 ID=MS.gene012092.t1.exon1;Parent=MS.gene012092.t1
chr8.4 CDS 29415782 29415935 29415782 ID=cds.MS.gene012092.t1;Parent=MS.gene012092.t1
chr8.4 exon 29416434 29416709 29416434 ID=MS.gene012092.t1.exon2;Parent=MS.gene012092.t1
chr8.4 CDS 29416434 29416709 29416434 ID=cds.MS.gene012092.t1;Parent=MS.gene012092.t1
chr8.4 exon 29418652 29419253 29418652 ID=MS.gene012092.t1.exon3;Parent=MS.gene012092.t1
chr8.4 CDS 29418652 29419253 29418652 ID=cds.MS.gene012092.t1;Parent=MS.gene012092.t1
Gene Sequence

>MS.gene012092

ATGGAGTCATGTGTCCCACCTGGATTTCGGTTCCACCCAACGGATGGAGAGCTTGTTGGTTATTATCTTAGAAAGAAAGTAGCTTCTCACAAGATTGATCTTGATGTTATCAAAGAGATTGATCTATACCGTATTGAACCCTGGGATCTCCAAGGTATATTACTTATATTACTAAATTTTATACACTACACATACTATATATTGTTCAAGTTTTAAACCATGTTCAACATAGTGATGGTAGTTGCATCGCAATCTCGATACTATAGAGATTTTCAATCGATTATGATTGACGCGTACGCAAATTTAAATGTAGTTACATTATAGTTGCAGACACATAAAAAATATCTACTAAAAAAAGTTGAAATATTGACGGAAATTTATCGACACAAAATTTGTCGAATTATTTTATTTTTTGTCATGTATCTGATTTTCGTTGTAGTATATGATACTGTGATCTAGATCACAGTTGCAAATTCTTTTCTGAATCTTGTGTGTGTAGTGTTACATGATTATCCTATAGAGTAACGCATAAAATACACACTTTGATCAACCCTATTGATTAGGGTTTTAACAGTTAATTATGTTTTAGCCTATTTTGTGTTCTTGTTTAAAAGTATACATATATTGATAGGTTTTAGATCTTTGTATACAGAGAGATGTAGAATTGGGAATGAGGAGCAACATGAGTGGTATTTTTTTAGTCACAAAGATAAGAAATATCCAACAGGGACGAGAACGAATAGAGCTACAATGGCAGGGTTCTGGAAAGCAACCGGAAGAGATAAGTCGGTGTATGAACGAACAAAACTGATTGGAATGAGGAAGACACTCGTTTTCTACAAAGGAAGAGCACCTAATGGACAGAAAACTGATTGGATCATGCATGAATATAGGCTTGAAACAGTTGAAAATGCACCTCCACAGGCAAGTATATACATATATTTACATACCATATATTATGTGTTGAGTTGATTAAGTTCAAACTTGATTAGTAACTTTGGATATAGATTCCCCTTGATTAATTAATTAAATATTAGATATTCTAGACACTATAGTCTTTTCCTTTTTCAGACAAGAAAACAAGGATGTTTCTATAAGTTGGAGAATGAGCATGGTTACTTTTTTGTTTGTTATAGAAGTCTTGATTTAAAGGGTTTTCAACTTTCAAGTATTTCCTTCTCTTGATGTGTCTTTTTCTTATGTTATAGTTTAGTCTAAGCATTTGATTGGCTCCTCTAAACTCGTTTTATAACGTAATAATACTATAAAGTACAACTTTGGTCTTCCACTAATTAACAATATTCGTAAATAATATTCACCAAGGTACGTACAAACTTTTTTGCTAGGGAGTAATTGAGAATTTTCACCAGAAAGAAGTCAAAAGTCACTATATACTTTCAAAAGCGTATAAATTATCATCTTTCTTTTACTTTTTGGCTAGAGACTTTTCTTGTCAAACGTTCACATCATTAGTTTTATTTTTTAGGTTAGAGAGTTTTGAAGAGAGGAATCGTACTTCTTAATAGAAATGATTTGTAAATTTTGATGTCAACTAAAATGTTTTATTATGGATGGCCTCTCTAGTTAGTGATCTCAGCCATTAATCAAGATCAACTGATTAGTTGAGATTTCTAGTGTATTAATGTTAGCTCTTTCTCTTCCTAATTCTCTAACGAATGAATTTATATGAATCTCACCTATATAAAATAAAATAATTTAAAACATTTTCTCTCTTAAATGTTAATTATTTGGTGAGCCTAGAAAAAAAAACCATTTTTTTACATATATTGTGTTGCATTTTTAGTTTTTTACGGATTGTATTGTATTTTTATTGGAGTGACAAAAAAGGAGAAAGTTATTTCAATCCACACATATATACACACACATATTGCCTTTTAAGGGTAAAGGTTTTTTTCTCAGGAATTCAAGTTTTGCATTAAAAAAAATCTAATTTTGGTATTTTAAGAATTTGAGTTACATGTTAGCCTTCTTTTATTTTTATTCATTTTAAGGATGGTTTTCATTTCATTAGATGATCCTTTTATTGGCCGATTGTATTTTATTTGACTTAATTAATGATTGACTACTAGTAGTAGTACGTACCAAAAAGACTGAAACTTTGCAAAAGTTAAAAGGGGGCACACGCATAAAAAGAACTTTCACCTTTTCACATTCAAAACATCATCAATCAAGTAGTTGATGACATAGTCAAGTCAAATATGACAATACCTTCGTCTCTAAATTTAAGTCTCTTTTGACCAATTTAAAAAGTTTTAAACAAAAATAGATAAATAATCTAGTTAATTGTGTTAAATTTATCAATAGGCGTATTATTTTTTTATTTTTTTTCAATTATTATAACTCATAGTTTTCCACTTAATCAATTATTGTCTTTAATTTTAAATAATAATGAATAATTTTATAACCAAACTAATTAATGTATTTGTTGTGTTATAAGAAAATATTATAGTGTTAATAACTTTATTTAACGGTCCCCGTGACCTTAGCTCAGTTGATAGGGACATTGCATAATATATGCAGAAGTCGGGGAATCCCGGATACCCCACTTCTCCATATTTAAAATGTGTGAGCTTCAGTCACTAGGCTACTAAACAAAAAAAAAACTTTATTTAAAGGTGAATATTTCGGGAGAACCCGAATTTAAATTAATTCGGGTTGAAACAATTGTTCTCGTATTTTACTTATCATTTAATCGAATTTTAAATTATCATAAGTTTTTTTTTGGAACTAGACACTTAGAACCAAAAAATTACTAGAACATAAAATTATAAGAAGAAAAAAATTTAATTCAAAAGGAGTTTAGAGAAAATGGAAAGAAGAAAAAAAACAAGAAAATCATCACTCTTTAGCTTTCAAACTTAAATTGAGTGTTCCCTTGCAGGAAGAAGGTTGGGTTGTGTGCAAAGCATTCAAGAAAAAAACAAGTGTCCAAGCAAAAACAAATGAAAGATGGGATCCAGGTCACTTATATGATGAACAAACAAGTAGCACCATCTCAAGGGTGGACCCCATTGACCTCATCTTAAGACAACCACAGAAGATTTCACCTCAAAATTTCATGTACAAACAAGAGATAGAAGCAGAAGCAGAAGCAGATACATTATTAAGCTTCATGCATTCAGAACAAATGGTACCTCTTCCTCAGCTAGAAAGTCCCTCTTTAACAAAGAGGCAAAACTCAATGCCAATAATATCAGAACATAACAATAATGAATTTCAAAATGGATTATTATTCAACATCAACAACAAAAGAGAGAAAGTGACTGATTGGAGGGATCTTGACAAGTTTGTGGCTTCTCAGTTGAGTCAAGAAGATCATAGGCATGAAACAAGCTCAGACATGTCATTGTTCCTACTTCAAAGTAGTAAGGATGATGAAGAGAACAAGTTAAGCTCATTTTTAACTACAAGGTCAGATTGTGACATTGGTATATGTGTATTTGAAAATTAA
Protein sequence

>MS.gene012092.t1

MESCVPPGFRFHPTDGELVGYYLRKKVASHKIDLDVIKEIDLYRIEPWDLQERCRIGNEEQHEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENAPPQATFKLKLSVPLQEEGWVVCKAFKKKTSVQAKTNERWDPGHLYDEQTSSTISRVDPIDLILRQPQKISPQNFMYKQEIEAEAEADTLLSFMHSEQMVPLPQLESPSLTKRQNSMPIISEHNNNEFQNGLLFNINNKREKVTDWRDLDKFVASQLSQEDHRHETSSDMSLFLLQSSKDDEENKLSSFLTTRSDCDIGICVFEN