AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012129

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012129.t1 MTR_8g075340 97.783 1173 26 0 1 1173 1 1173 0.0 2387
MS.gene012129.t1 MTR_5g022470 74.727 1191 253 14 4 1167 28 1197 0.0 1758
MS.gene012129.t1 MTR_5g022470 73.577 1124 249 14 4 1100 28 1130 0.0 1630
MS.gene012129.t1 MTR_1g090850 29.449 472 300 11 280 734 197 652 1.91e-42 169
MS.gene012129.t1 MTR_1g090850 39.231 130 65 4 1024 1153 921 1036 9.98e-17 86.3
MS.gene012129.t1 MTR_1g087140 30.172 464 270 15 303 735 231 671 1.35e-40 163
MS.gene012129.t1 MTR_1g087140 29.665 209 123 7 946 1153 899 1084 1.38e-16 85.9
MS.gene012129.t1 MTR_8g080770 34.688 320 185 5 424 726 236 548 1.11e-36 150
MS.gene012129.t1 MTR_8g080770 36.296 135 63 3 1026 1154 729 846 8.81e-17 86.3
MS.gene012129.t1 MTR_8g080770 34.375 320 186 5 424 726 345 657 1.44e-36 150
MS.gene012129.t1 MTR_8g080770 36.296 135 63 3 1026 1154 838 955 7.27e-17 86.7
MS.gene012129.t1 MTR_3g085130 33.228 316 193 6 427 726 193 506 6.70e-36 147
MS.gene012129.t1 MTR_3g085130 34.161 161 81 4 999 1154 669 809 8.09e-17 86.7
MS.gene012129.t1 MTR_3g085130 32.595 316 195 5 427 726 403 716 4.68e-35 145
MS.gene012129.t1 MTR_3g085130 34.161 161 81 4 999 1154 879 1019 5.01e-17 87.4
MS.gene012129.t1 MTR_8g106150 34.091 308 153 5 460 726 372 670 6.32e-35 145
MS.gene012129.t1 MTR_8g106150 35.664 143 60 4 1026 1154 858 982 1.49e-16 85.9
MS.gene012129.t1 MTR_8g106150 34.091 308 153 5 460 726 129 427 1.05e-34 143
MS.gene012129.t1 MTR_8g106150 35.664 143 60 4 1026 1154 615 739 1.10e-16 85.9
MS.gene012129.t1 MTR_5g097410 26.654 529 321 15 426 921 572 1066 2.15e-32 137
MS.gene012129.t1 MTR_5g097410 31.944 144 61 4 1030 1154 1075 1200 2.43e-12 72.0
MS.gene012129.t1 MTR_7g109150 32.031 256 152 3 461 716 334 567 5.93e-29 124
MS.gene012129.t1 MTR_4g031150 31.321 265 159 4 461 725 383 624 9.74e-28 121
MS.gene012129.t1 MTR_3g105590 31.985 272 164 5 474 726 373 642 3.11e-27 120
MS.gene012129.t1 MTR_1g013360 27.154 383 215 10 405 726 298 677 8.80e-25 112
MS.gene012129.t1 MTR_8g019680 33.987 153 85 5 1017 1169 17 153 3.83e-14 71.6
MS.gene012129.t1 MTR_7g116330 27.381 252 143 10 909 1153 527 745 1.67e-13 75.5
MS.gene012129.t1 MTR_7g116330 24.036 337 213 9 460 784 364 669 1.08e-12 73.2
MS.gene012129.t1 MTR_1g079790 22.785 395 249 14 460 837 360 715 9.67e-13 73.2
MS.gene012129.t1 MTR_8g063580 31.690 142 72 4 1029 1167 12 131 1.93e-12 66.2
MS.gene012129.t1 MTR_1g073840 29.496 139 97 1 461 599 355 492 2.90e-12 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012129.t1 AT2G17820 64.100 1195 367 17 8 1167 30 1197 0.0 1501
MS.gene012129.t1 AT2G47430 25.207 1206 683 44 57 1154 14 1108 9.05e-75 270
MS.gene012129.t1 AT2G01830 33.141 347 205 6 405 726 406 750 7.43e-41 164
MS.gene012129.t1 AT2G01830 36.735 147 67 4 1015 1154 932 1059 4.06e-17 87.8
MS.gene012129.t1 AT2G01830 33.141 347 205 6 405 726 395 739 8.80e-41 164
MS.gene012129.t1 AT2G01830 36.735 147 67 4 1015 1154 921 1048 4.40e-17 87.8
MS.gene012129.t1 AT2G01830 33.141 347 205 6 405 726 383 727 9.95e-41 164
MS.gene012129.t1 AT2G01830 36.735 147 67 4 1015 1154 909 1036 4.56e-17 87.4
MS.gene012129.t1 AT2G01830 33.141 347 205 6 405 726 383 727 9.95e-41 164
MS.gene012129.t1 AT2G01830 36.735 147 67 4 1015 1154 909 1036 4.56e-17 87.4
MS.gene012129.t1 AT2G01830 33.141 347 205 6 405 726 383 727 9.95e-41 164
MS.gene012129.t1 AT2G01830 36.735 147 67 4 1015 1154 909 1036 4.56e-17 87.4
MS.gene012129.t1 AT2G01830 33.141 347 205 6 405 726 383 727 9.95e-41 164
MS.gene012129.t1 AT2G01830 36.735 147 67 4 1015 1154 909 1036 4.56e-17 87.4
MS.gene012129.t1 AT1G27320 35.294 323 195 4 405 716 384 703 5.65e-40 161
MS.gene012129.t1 AT1G27320 34.014 147 62 3 1026 1154 887 1016 1.82e-14 79.0
MS.gene012129.t1 AT5G35750 32.919 322 193 6 424 726 540 857 4.47e-37 152
MS.gene012129.t1 AT5G35750 30.263 152 69 4 1030 1162 1036 1169 2.29e-13 75.5
MS.gene012129.t1 AT1G66340 32.422 256 147 3 461 716 333 562 8.70e-31 131
MS.gene012129.t1 AT5G10720 32.946 258 146 6 474 726 369 604 1.66e-27 121
MS.gene012129.t1 AT2G40940 31.373 255 153 3 460 714 332 564 1.44e-24 110
MS.gene012129.t1 AT3G04580 35.664 143 72 4 1021 1162 634 757 1.85e-14 79.0
MS.gene012129.t1 AT3G04580 35.664 143 72 4 1021 1162 634 757 1.85e-14 79.0

Find 216 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAAAGATGATTCATATTT+TGG 0.108507 8.4:+29841119 MS.gene012129:CDS
ACCTCATATTTGCAAGAAAT+TGG 0.164195 8.4:-29838594 None:intergenic
CAGAAAAGTAACTGCTTATT+AGG 0.180290 8.4:+29841357 MS.gene012129:CDS
TCACTATCACCATAAGAATT+TGG 0.199041 8.4:-29839481 None:intergenic
GTTCTCATGTTGCTTCATTT+TGG 0.222254 8.4:-29839548 None:intergenic
CCAAGATGTTATTGAGTAAA+TGG 0.227661 8.4:-29838854 None:intergenic
CCGCCTTTCTTCTTGCTTCA+AGG 0.229203 8.4:-29838549 None:intergenic
CTTGCGAAGCTCCGTCTTTA+CGG 0.241218 8.4:-29841058 None:intergenic
TAGGTATTGACCCGAGTAAA+TGG 0.298638 8.4:+29839817 MS.gene012129:intron
GCCTCATATCCATCCATCTT+TGG 0.303088 8.4:-29841849 None:intergenic
TTCAGCAGCATTGCCGGTTT+GGG 0.306475 8.4:+29837282 MS.gene012129:CDS
CATACCAAGAAAGCATATAA+TGG 0.311598 8.4:+29838381 MS.gene012129:CDS
GAAATAAGGAAATCAGAAAT+TGG 0.311793 8.4:+29841879 MS.gene012129:CDS
AAAGAAACCTGAGCTTAAAA+TGG 0.319263 8.4:+29837477 MS.gene012129:CDS
TTTCAGCAGCATTGCCGGTT+TGG 0.320446 8.4:+29837281 MS.gene012129:CDS
CCTGTCAATGGCGAGAAAAT+TGG 0.321831 8.4:+29837142 MS.gene012129:CDS
TTCATATGACTTGATCCTAA+TGG 0.325693 8.4:+29841698 MS.gene012129:CDS
TTCTCTTTGTTTGTCTCCAT+TGG 0.328818 8.4:-29841301 None:intergenic
GCCAATTTCTTGCAAATATG+AGG 0.329015 8.4:+29838593 MS.gene012129:CDS
GCTATACTTATTGAGTCTTC+TGG 0.329518 8.4:-29837184 None:intergenic
AACCAAGTCTCTAAATAGTT+TGG 0.329706 8.4:+29836618 MS.gene012129:CDS
AGTCAAATTCTGCCTCTTCT+AGG 0.333858 8.4:-29839038 None:intergenic
AGAAATCAAGGTTGTCAAAA+AGG 0.334329 8.4:+29840487 MS.gene012129:CDS
CATGCCCACTTCTAAACATT+TGG 0.335841 8.4:-29841961 None:intergenic
ATACCAAGAAAGCATATAAT+GGG 0.337592 8.4:+29838382 MS.gene012129:CDS
ATGATATGCCAAAGCTAGTT+CGG 0.350156 8.4:+29839228 MS.gene012129:CDS
ATGAGGCAACAAAAGAAATA+AGG 0.352677 8.4:+29841865 MS.gene012129:CDS
TAGACTTGAGCACAGATATA+TGG 0.354728 8.4:+29840956 MS.gene012129:CDS
TATAATCGCATTAGTGTTCC+TGG 0.355538 8.4:-29840515 None:intergenic
GGTTCTGACATATCTGAAAT+TGG 0.360389 8.4:+29841258 MS.gene012129:CDS
CTCTTTCTGCTTGAGTGGCT+TGG 0.362577 8.4:-29836768 None:intergenic
GACATTGAGTAGTTGAATAC+TGG 0.372323 8.4:-29836036 None:intergenic
TCTTTGTGAAATGCCATGTT+AGG 0.374134 8.4:-29836588 None:intergenic
TGATATGCCAAAGCTAGTTC+GGG 0.388131 8.4:+29839229 MS.gene012129:CDS
CAGGCAGTGGATGCTCTAAA+TGG 0.388139 8.4:+29841618 MS.gene012129:CDS
GTTACTTTCAGCAGCATTGC+CGG 0.388211 8.4:+29837276 MS.gene012129:CDS
CTTATTACAGGTTAATAAGA+TGG 0.389612 8.4:+29840460 MS.gene012129:intron
AGGCACGGAGGCACTGGTCT+TGG 0.389721 8.4:+29840054 MS.gene012129:intron
TATAGCACATAGGTGGAATC+TGG 0.394834 8.4:+29839006 MS.gene012129:intron
AAGCTCCGTCTTTACGGTAT+TGG 0.396922 8.4:-29841052 None:intergenic
ATCATCTTTGCTTTGTAAAG+AGG 0.401741 8.4:-29841108 None:intergenic
TCCATCAGCTTAAAGTCAAT+TGG 0.402940 8.4:-29842002 None:intergenic
TGTGAAAATCCAAATTCTTA+TGG 0.403470 8.4:+29839472 MS.gene012129:CDS
TATTAGAAGTCTTCTTTGAA+TGG 0.404156 8.4:-29839570 None:intergenic
CCATTTACTCAATAACATCT+TGG 0.410502 8.4:+29838854 MS.gene012129:CDS
TTCATATGCTGCAAATGAAT+TGG 0.417578 8.4:-29837071 None:intergenic
CTTGATCCTAATGGATTGTC+AGG 0.421407 8.4:+29841707 MS.gene012129:CDS
TTCTAAATTCATTAGCATAC+AGG 0.422479 8.4:+29840888 MS.gene012129:CDS
TCAACAACAATGACAAATGT+TGG 0.424662 8.4:-29840922 None:intergenic
GAATTCAGACCCTCCGGAGC+TGG 0.424803 8.4:-29840868 None:intergenic
ACACCGATGGCAGCAGTAAT+CGG 0.426125 8.4:+29838741 MS.gene012129:CDS
GAATCTCCCCGAACTAGCTT+TGG 0.429030 8.4:-29839236 None:intergenic
ACAATGACAAATGTTGGGTT+TGG 0.429280 8.4:-29840916 None:intergenic
AAAAGCATTGTTGCAGTTGT+GGG 0.430753 8.4:+29837316 MS.gene012129:CDS
TTTATTTCAACAAGAGCAAA+AGG 0.434209 8.4:+29841414 MS.gene012129:CDS
TGCTGTAGGCGACGGACAAC+AGG 0.439996 8.4:+29841599 MS.gene012129:CDS
AGAAGTCTCTTGAAGGTTTG+AGG 0.441819 8.4:+29841499 MS.gene012129:CDS
AGCCAAACTATTTAGAGACT+TGG 0.442714 8.4:-29836620 None:intergenic
ATAGCAACAAGTCTGCGATT+TGG 0.446888 8.4:+29837101 MS.gene012129:CDS
ACCCTAGAGCAGAAGCAATT+CGG 0.448442 8.4:+29839511 MS.gene012129:CDS
GTTATGCTAGCTATCTTGAT+TGG 0.449619 8.4:+29836553 MS.gene012129:CDS
AAGACGGAGCTTCGCAAGAA+AGG 0.451119 8.4:+29841063 MS.gene012129:CDS
ATCCGAATTGCTTCTGCTCT+AGG 0.453069 8.4:-29839513 None:intergenic
TGACAGGATCAAGTTGTTCC+CGG 0.454045 8.4:-29837126 None:intergenic
CAACAACAATGACAAATGTT+GGG 0.456008 8.4:-29840921 None:intergenic
GACTTTGGAAGGGAACTTGA+AGG 0.456718 8.4:+29839057 MS.gene012129:CDS
GCCAATTGACTTTAAGCTGA+TGG 0.460526 8.4:+29842001 MS.gene012129:CDS
CTCAACTCTTTCTGCTTGAG+TGG 0.460857 8.4:-29836773 None:intergenic
AGGCAGAATTTGACTTTGGA+AGG 0.465133 8.4:+29839046 MS.gene012129:CDS
CATTTCAGGCACGGAGGCAC+TGG 0.467371 8.4:+29840048 MS.gene012129:intron
TAAAAGCATTGTTGCAGTTG+TGG 0.467925 8.4:+29837315 MS.gene012129:CDS
ACGCGAGAGCGAAATTTGTA+TGG 0.470371 8.4:+29841010 MS.gene012129:CDS
ATGAGTCAATGTAATATTGC+TGG 0.473523 8.4:-29837615 None:intergenic
ACTCGATAACTGTCAAGTAT+AGG 0.475293 8.4:+29836966 MS.gene012129:CDS
GAAGAGGCAGAATTTGACTT+TGG 0.476112 8.4:+29839042 MS.gene012129:CDS
AGCATTTCATAGAGACTTGA+AGG 0.476420 8.4:+29837003 MS.gene012129:CDS
CGTGGTTCGCCTAGCAATCA+TGG 0.479373 8.4:+29836081 MS.gene012129:CDS
ATTAGGATCAAGTCATATGA+AGG 0.480841 8.4:-29841696 None:intergenic
TGATGCTCACTTTCCAGCTC+CGG 0.483762 8.4:+29840855 MS.gene012129:CDS
CACATACCTGACAATCCATT+AGG 0.485467 8.4:-29841713 None:intergenic
ATATTGCTGGTGACCTAGCC+TGG 0.485638 8.4:-29837602 None:intergenic
AAGAAAATTCCACAAGGATG+TGG 0.485997 8.4:+29836000 MS.gene012129:CDS
CAAGTCTGCGATTTGGTACC+GGG 0.486373 8.4:+29837108 MS.gene012129:CDS
GAAGACTCAATAAGTATAGC+TGG 0.486565 8.4:+29837187 MS.gene012129:CDS
ATCCTACTACAGTGTCTTCG+TGG 0.488058 8.4:+29836063 MS.gene012129:CDS
TCACTGTGTATTATCGTCAT+TGG 0.491172 8.4:+29838454 MS.gene012129:CDS
GCCAAAGATGGATGGATATG+AGG 0.491952 8.4:+29841848 MS.gene012129:CDS
AACACAGAATCCCATTTACT+CGG 0.494050 8.4:-29839828 None:intergenic
CTAAAATAATTTCTACATTG+TGG 0.494150 8.4:-29839113 None:intergenic
AATGGAAAGAAGTCTCTTGA+AGG 0.494792 8.4:+29841492 MS.gene012129:CDS
AGCTTCGTGGCACGTTTCTG+TGG 0.494812 8.4:+29837234 MS.gene012129:CDS
ACAAGTCTGCGATTTGGTAC+CGG 0.495830 8.4:+29837107 MS.gene012129:CDS
TCTTTGCATTGTCAGATCCT+TGG 0.496165 8.4:+29840077 MS.gene012129:CDS
TGCCACGAAGCTACACCGTC+AGG 0.496443 8.4:-29837223 None:intergenic
AGTGAAACAAGTAGGATTAG+TGG 0.496758 8.4:+29841453 MS.gene012129:CDS
TAAGATGGGTGGAGAAATCA+AGG 0.499777 8.4:+29840475 MS.gene012129:CDS
TCATGAACCTCATGACTTGG+AGG 0.502697 8.4:-29837571 None:intergenic
TTGATAACAAAATGATACTC+TGG 0.503219 8.4:+29839593 MS.gene012129:CDS
TGCCCATGTGACAGCCCTCA+TGG 0.504539 8.4:-29836918 None:intergenic
TAGTGTAGGGCAGTTAATGA+AGG 0.504796 8.4:+29837357 MS.gene012129:CDS
TCAAGTCTCTATGAAATGCT+TGG 0.505424 8.4:-29837000 None:intergenic
TGCTCACTTTCCAGCTCCGG+AGG 0.508924 8.4:+29840858 MS.gene012129:CDS
AGGTATTGACCCGAGTAAAT+GGG 0.509028 8.4:+29839818 MS.gene012129:intron
TCTTCATGAACCTCATGACT+TGG 0.512203 8.4:-29837574 None:intergenic
TTTGTTGAATTTGTAAGTAG+AGG 0.513089 8.4:-29837457 None:intergenic
AAGATACAGCAGTAATTCAA+AGG 0.514361 8.4:+29841535 MS.gene012129:CDS
ATTCCATTCAGATGCTTCCA+TGG 0.518500 8.4:-29840770 None:intergenic
GGTTCAAGTAAAGCTATGAA+TGG 0.518559 8.4:+29841474 MS.gene012129:CDS
CCACCATGGAAGCATCTGAA+TGG 0.519665 8.4:+29840767 MS.gene012129:CDS
TCCGAATTGCTTCTGCTCTA+GGG 0.520011 8.4:-29839512 None:intergenic
TCTAATCTTGTAACTGCCAA+TGG 0.521244 8.4:+29841285 MS.gene012129:CDS
GAACTAGTTGATAAGCATAG+TGG 0.522807 8.4:+29837379 MS.gene012129:CDS
TACCTGACGGTGTAGCTTCG+TGG 0.523588 8.4:+29837221 MS.gene012129:CDS
ATGTGGCTAAAGAAAACATA+CGG 0.523995 8.4:+29837538 MS.gene012129:CDS
CAACTGCACTTTATAGTGTA+GGG 0.526485 8.4:+29837344 MS.gene012129:CDS
TTATTACAGGTTAATAAGAT+GGG 0.527467 8.4:+29840461 MS.gene012129:intron
AATAAAGCAGATGCCAAAGA+TGG 0.528045 8.4:+29841836 MS.gene012129:intron
ACAACTGCACTTTATAGTGT+AGG 0.528302 8.4:+29837343 MS.gene012129:CDS
ATCCATGAGGGCTGTCACAT+GGG 0.532393 8.4:+29836916 MS.gene012129:CDS
TTACGGTATTGGACGAGTCA+TGG 0.532764 8.4:-29841041 None:intergenic
TGTGATGTTGCAAGCTCAGA+TGG 0.534189 8.4:+29841237 MS.gene012129:CDS
ATTAACTGACCATGATTGCT+AGG 0.534354 8.4:-29836090 None:intergenic
GATGCTCTAAATGGCATGCC+TGG 0.535325 8.4:+29841627 MS.gene012129:CDS
TTATTAGAAGAATCCCAAAC+CGG 0.537322 8.4:-29837295 None:intergenic
CACCGTCAGGTACTTGAGAC+AGG 0.538434 8.4:-29837210 None:intergenic
TTGTTGAATTTGTAAGTAGA+GGG 0.538960 8.4:-29837456 None:intergenic
CATGAAGAGAACGCCAGGCT+AGG 0.542087 8.4:+29837589 MS.gene012129:CDS
GCTTCGTGGCACGTTTCTGT+GGG 0.544714 8.4:+29837235 MS.gene012129:CDS
GAACAACTTGATCCTGTCAA+TGG 0.544898 8.4:+29837130 MS.gene012129:CDS
TGTAAGTAGAGGGTCATTTG+TGG 0.547760 8.4:-29837446 None:intergenic
AATGTTCCACATCCTCAAGA+TGG 0.547990 8.4:-29836674 None:intergenic
AATTTAGAATTCAGACCCTC+CGG 0.549015 8.4:-29840874 None:intergenic
TGAAAGAGCCTTCAAAACAT+TGG 0.549125 8.4:+29838414 MS.gene012129:CDS
GCAAAAGGTGAAGATTCTAA+AGG 0.549796 8.4:+29841429 MS.gene012129:CDS
TTCTGCAACGTCCCATCTTG+AGG 0.550001 8.4:+29836662 MS.gene012129:CDS
TCATCATTGTTAAGATGTCA+AGG 0.553419 8.4:-29842057 None:intergenic
GAAGTTGACGACACAGGCTG+TGG 0.553420 8.4:+29839619 MS.gene012129:CDS
ATTGACAGATGGAGTATCAA+AGG 0.553958 8.4:+29838495 MS.gene012129:CDS
AGGTTCATGAAGAGAACGCC+AGG 0.554398 8.4:+29837584 MS.gene012129:CDS
AAGCAGATGCCAAAGATGGA+TGG 0.554555 8.4:+29841840 MS.gene012129:intron
AATCCATGAGGGCTGTCACA+TGG 0.555825 8.4:+29836915 MS.gene012129:CDS
AACTAGTTGATAAGCATAGT+GGG 0.557926 8.4:+29837380 MS.gene012129:CDS
GGTCTCATTATATGAAAGAT+CGG 0.560737 8.4:-29837050 None:intergenic
TCACCTTGAAGCAAGAAGAA+AGG 0.560796 8.4:+29838546 MS.gene012129:CDS
TGCTTATTAGGATTAAGTAA+TGG 0.563159 8.4:+29841369 MS.gene012129:CDS
ATGGAAGCATCTGAATGGAA+TGG 0.564124 8.4:+29840772 MS.gene012129:CDS
AGATACAGCAGTAATTCAAA+GGG 0.566152 8.4:+29841536 MS.gene012129:CDS
TCGGGGAGATTCTGCGAGAG+TGG 0.566872 8.4:+29839247 MS.gene012129:CDS
CAGGTACTTCTTGCACTGCA+TGG 0.569416 8.4:+29840694 MS.gene012129:intron
GGCAGAATTTGACTTTGGAA+GGG 0.570782 8.4:+29839047 MS.gene012129:CDS
ATTGTGTTTCTTTCAACACC+AGG 0.570876 8.4:-29841645 None:intergenic
AGGCGACGGACAACAGGCAG+TGG 0.572133 8.4:+29841605 MS.gene012129:CDS
AACGTCCCATCTTGAGGATG+TGG 0.573006 8.4:+29836668 MS.gene012129:CDS
CATGAACCTCATGACTTGGA+GGG 0.573555 8.4:-29837570 None:intergenic
GTCACATTATTCTGAGAGGA+TGG 0.574036 8.4:+29839449 MS.gene012129:CDS
GGAGCCACCGTTGTTGCTGT+AGG 0.580845 8.4:+29841585 MS.gene012129:CDS
ATAACTGTCAAGTATAGGAA+TGG 0.583037 8.4:+29836971 MS.gene012129:CDS
AGGATTAAGTAATGGATACA+TGG 0.583551 8.4:+29841377 MS.gene012129:CDS
ATGTTCCACATCCTCAAGAT+GGG 0.584461 8.4:-29836673 None:intergenic
AATCCGATTACTGCTGCCAT+CGG 0.585511 8.4:-29838744 None:intergenic
CATGCGACTAACTGCACCCG+TGG 0.587768 8.4:+29840538 MS.gene012129:CDS
TGAGCTGTAAGAGCGACGAT+TGG 0.588069 8.4:-29841918 None:intergenic
AAATAAGATTCATACCAGAA+AGG 0.590579 8.4:-29839137 None:intergenic
ACCGTTGTTGCTGTAGGCGA+CGG 0.591122 8.4:+29841591 MS.gene012129:CDS
CTCTCGCGTAGTACTTGTGA+AGG 0.591922 8.4:-29840996 None:intergenic
TGGAAAACTTGTCCTAGAAG+AGG 0.595077 8.4:+29839026 MS.gene012129:CDS
ATGTTGTTCAGTGGTATCCA+CGG 0.595253 8.4:-29840555 None:intergenic
CTAAAGGTAGTGAAACAAGT+AGG 0.597373 8.4:+29841445 MS.gene012129:CDS
TGAAGCCAAATGTTTAGAAG+TGG 0.598691 8.4:+29841956 MS.gene012129:CDS
AACCACGAAGACACTGTAGT+AGG 0.600067 8.4:-29836065 None:intergenic
TGTTGTTCAGTGGTATCCAC+GGG 0.604814 8.4:-29840554 None:intergenic
TGAAGCAAGAAGAAAGGCGG+AGG 0.605289 8.4:+29838552 MS.gene012129:CDS
TTACAGGTTAATAAGATGGG+TGG 0.605671 8.4:+29840464 MS.gene012129:intron
TGGAGACAAACAAAGAGAAG+AGG 0.609301 8.4:+29841305 MS.gene012129:CDS
TGGTTTGAAGTTGACGACAC+AGG 0.609444 8.4:+29839613 MS.gene012129:CDS
GGCCTGTCTCAAGTACCTGA+CGG 0.611371 8.4:+29837208 MS.gene012129:CDS
CTCGTCCAATACCGTAAAGA+CGG 0.614421 8.4:+29841047 MS.gene012129:CDS
GCTCACTTTCCAGCTCCGGA+GGG 0.614527 8.4:+29840859 MS.gene012129:CDS
TATGTATTTGACCTCTCAAG+AGG 0.615158 8.4:+29837405 MS.gene012129:CDS
CAAATGTTTAGAAGTGGGCA+TGG 0.615383 8.4:+29841962 MS.gene012129:CDS
GAGTATGTTATCAGAAGCCA+CGG 0.615717 8.4:+29836742 MS.gene012129:CDS
TAACATCTTGGATATAAGCA+AGG 0.616190 8.4:+29838866 MS.gene012129:CDS
GAAGCCAAATGTTTAGAAGT+GGG 0.619807 8.4:+29841957 MS.gene012129:CDS
CAATTTCCCTCCAAGTCATG+AGG 0.619846 8.4:+29837564 MS.gene012129:CDS
CTTGAGTGGCTTGGTTACCG+TGG 0.624316 8.4:-29836759 None:intergenic
TACAGCAGTAATTCAAAGGG+TGG 0.626931 8.4:+29841539 MS.gene012129:CDS
CACTCAAGCAGAAAGAGTTG+AGG 0.627252 8.4:+29836774 MS.gene012129:CDS
GACTTGACAATGTTGTTCAG+TGG 0.628126 8.4:-29840564 None:intergenic
TTAGGATCAAGTCATATGAA+GGG 0.630200 8.4:-29841695 None:intergenic
ATAATCGCATTAGTGTTCCT+GGG 0.633707 8.4:-29840514 None:intergenic
TACCAAGAAAGCATATAATG+GGG 0.634950 8.4:+29838383 MS.gene012129:CDS
GGCAATGCTGCTGAAAGTAA+CGG 0.637366 8.4:-29837274 None:intergenic
TAAGAGCGACGATTGGAATG+TGG 0.639382 8.4:-29841911 None:intergenic
TGATAACGAAGTAATAAGAG+AGG 0.639587 8.4:+29837510 MS.gene012129:CDS
CGCAGATGTATGAATCCATG+AGG 0.643433 8.4:+29836903 MS.gene012129:intron
GTCTACTCACTATCCTAACA+TGG 0.643699 8.4:+29836575 MS.gene012129:CDS
GATAACGAAGTAATAAGAGA+GGG 0.644016 8.4:+29837511 MS.gene012129:CDS
ACACAGAATCCCATTTACTC+GGG 0.644528 8.4:-29839827 None:intergenic
GTAGATTAATTACATCCAAG+TGG 0.645554 8.4:+29840725 MS.gene012129:CDS
CCATTCAGATGCTTCCATGG+TGG 0.651094 8.4:-29840767 None:intergenic
GTTGCAGAAGTTCGTAACGC+AGG 0.651401 8.4:-29836648 None:intergenic
AAGCAAATAGCCCTCTTGAG+AGG 0.654817 8.4:-29837416 None:intergenic
ATGTATTTGACCTCTCAAGA+GGG 0.661239 8.4:+29837406 MS.gene012129:CDS
ACCAAGAAAGCATATAATGG+GGG 0.661897 8.4:+29838384 MS.gene012129:CDS
TGTGGCTAAAGAAAACATAC+GGG 0.667227 8.4:+29837539 MS.gene012129:CDS
TCCGTCGCCTACAGCAACAA+CGG 0.667951 8.4:-29841592 None:intergenic
TCATGAACTGAGGACACCGA+TGG 0.669919 8.4:+29838728 MS.gene012129:CDS
GCTGGTCACATTATTCTGAG+AGG 0.685346 8.4:+29839445 MS.gene012129:intron
GCAGATGTATGAATCCATGA+GGG 0.693241 8.4:+29836904 MS.gene012129:intron
CCTTGAAGCAAGAAGAAAGG+CGG 0.694393 8.4:+29838549 MS.gene012129:CDS
TGCATTACAGTCATGAACTG+AGG 0.713029 8.4:+29838718 MS.gene012129:intron
TAATAAGAGAGGGAGCGATG+TGG 0.713072 8.4:+29837521 MS.gene012129:CDS
GATATGCCAAAGCTAGTTCG+GGG 0.714157 8.4:+29839230 MS.gene012129:CDS
AGGCAGAAGAAAATTCCACA+AGG 0.721322 8.4:+29835994 MS.gene012129:CDS
GTCGCCTACAGCAACAACGG+TGG 0.727532 8.4:-29841589 None:intergenic
ATTGAGTAAATGGAGCAATG+CGG 0.793121 8.4:-29838844 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTTGTTTAAATACTA+CGG - chr8.4:29836313-29836332 None:intergenic 10.0%
!!! AAAAGAAAAAAAATAGTTTT+AGG + chr8.4:29839698-29839717 MS.gene012129:intron 10.0%
!!! TATAATGTATTTATACATTT+TGG + chr8.4:29838324-29838343 MS.gene012129:intron 10.0%
!! AAAAAATAAGATCAAATGTA+AGG - chr8.4:29837696-29837715 None:intergenic 15.0%
!!! AAATAAATAACCAATTTTGT+TGG + chr8.4:29836500-29836519 MS.gene012129:intron 15.0%
!!! CTTTATATTATCTTTTCTTA+TGG + chr8.4:29838130-29838149 MS.gene012129:intron 15.0%
!!! TAAAATTTTACGATGTTATA+TGG + chr8.4:29837726-29837745 MS.gene012129:intron 15.0%
!! AATAAACCACTAAAAGAAAA+TGG - chr8.4:29836855-29836874 None:intergenic 20.0%
!! ACAAAAGAAAAATATGAAAG+AGG + chr8.4:29841173-29841192 MS.gene012129:CDS 20.0%
!! CAAAATTGTAACATCATATA+AGG - chr8.4:29836121-29836140 None:intergenic 20.0%
!! CTAAAATAATTTCTACATTG+TGG - chr8.4:29839116-29839135 None:intergenic 20.0%
!! TAAAATAAGTCAACTTTAAC+CGG - chr8.4:29837763-29837782 None:intergenic 20.0%
!! TAAATTCTAACTTATAGCAA+AGG - chr8.4:29836828-29836847 None:intergenic 20.0%
!! TTATTACAGGTTAATAAGAT+GGG + chr8.4:29840461-29840480 MS.gene012129:intron 20.0%
!! TTATTTATCTTCACAACAAA+GGG - chr8.4:29836486-29836505 None:intergenic 20.0%
!! TTTATTTATCTTCACAACAA+AGG - chr8.4:29836487-29836506 None:intergenic 20.0%
!!! AAAATTTATAATTTGTGTCC+TGG - chr8.4:29838279-29838298 None:intergenic 20.0%
!!! AAAATTTTCTGTGTTTCAAA+TGG + chr8.4:29839779-29839798 MS.gene012129:intron 20.0%
!!! AAATTTATAATTTGTGTCCT+GGG - chr8.4:29838278-29838297 None:intergenic 20.0%
!!! AAATTTTCTGTGTTTCAAAT+GGG + chr8.4:29839780-29839799 MS.gene012129:intron 20.0%
!!! AATATAAAGTCAAACTGTTT+TGG - chr8.4:29838119-29838138 None:intergenic 20.0%
!!! ACATTTTCTTATTTGAGTAA+CGG - chr8.4:29838820-29838839 None:intergenic 20.0%
!!! AGAAAATCATGATCTTATTT+TGG + chr8.4:29840329-29840348 MS.gene012129:intron 20.0%
!!! ATGTATTTATACATTTTGGT+TGG + chr8.4:29838328-29838347 MS.gene012129:intron 20.0%
!!! TAGAAATATACTAGTTTGTT+TGG + chr8.4:29837941-29837960 MS.gene012129:intron 20.0%
!!! TATTTTTGGTTGCATAATAT+AGG + chr8.4:29839155-29839174 MS.gene012129:intron 20.0%
!!! TTATTCTTTTGCAAATCAAA+CGG - chr8.4:29840122-29840141 None:intergenic 20.0%
!!! TTTTTGTCTTGTATAGTAAT+TGG + chr8.4:29840189-29840208 MS.gene012129:intron 20.0%
! AAAAAATTAAGATACACCGA+TGG + chr8.4:29838645-29838664 MS.gene012129:intron 25.0%
! AAAGTTGTCTAGTTAGTTAA+AGG - chr8.4:29840172-29840191 None:intergenic 25.0%
! AAATAAGATTCATACCAGAA+AGG - chr8.4:29839140-29839159 None:intergenic 25.0%
! AATAAGCTGAAAACAGATTA+TGG - chr8.4:29838049-29838068 None:intergenic 25.0%
! ACCTACATATACCAAAATAA+TGG - chr8.4:29836535-29836554 None:intergenic 25.0%
! AGATAAACAGCTTATATAAG+CGG - chr8.4:29838172-29838191 None:intergenic 25.0%
! ATAAGCTGTTTATCTAAACA+AGG + chr8.4:29838177-29838196 MS.gene012129:intron 25.0%
! CATCTTATTAACCTGTAATA+AGG - chr8.4:29840462-29840481 None:intergenic 25.0%
! CTAATCTTAACTTTGTCAAA+TGG + chr8.4:29839416-29839435 MS.gene012129:intron 25.0%
! CTTATTACAGGTTAATAAGA+TGG + chr8.4:29840460-29840479 MS.gene012129:intron 25.0%
! GAAATAAGGAAATCAGAAAT+TGG + chr8.4:29841879-29841898 MS.gene012129:CDS 25.0%
! TATTAGAAGTCTTCTTTGAA+TGG - chr8.4:29839573-29839592 None:intergenic 25.0%
! TATTTAAAGGAAAACCATTG+TGG + chr8.4:29838946-29838965 MS.gene012129:intron 25.0%
! TCTAATATCTTATAGCACAT+AGG + chr8.4:29838996-29839015 MS.gene012129:intron 25.0%
! TGCTTAGAGCAATTATTTAA+AGG + chr8.4:29838933-29838952 MS.gene012129:intron 25.0%
! TGCTTATTAGGATTAAGTAA+TGG + chr8.4:29841369-29841388 MS.gene012129:CDS 25.0%
! TGTGAAAATCCAAATTCTTA+TGG + chr8.4:29839472-29839491 MS.gene012129:CDS 25.0%
! TTATCTTCTTACATTAGTAC+CGG + chr8.4:29836433-29836452 MS.gene012129:intron 25.0%
! TTCTAAATTCATTAGCATAC+AGG + chr8.4:29840888-29840907 MS.gene012129:CDS 25.0%
! TTGTTGAATTTGTAAGTAGA+GGG - chr8.4:29837459-29837478 None:intergenic 25.0%
! TTTATTTCAACAAGAGCAAA+AGG + chr8.4:29841414-29841433 MS.gene012129:CDS 25.0%
! TTTGTTGAATTTGTAAGTAG+AGG - chr8.4:29837460-29837479 None:intergenic 25.0%
!! ACCAATTTTGTTGGATTAAT+CGG + chr8.4:29836509-29836528 MS.gene012129:intron 25.0%
!! AGCAAAGATGATTCATATTT+TGG + chr8.4:29841119-29841138 MS.gene012129:CDS 25.0%
!! ATACCAAGAAAGCATATAAT+GGG + chr8.4:29838382-29838401 MS.gene012129:CDS 25.0%
!! ATATGACACTTCTTATTTCA+GGG - chr8.4:29840669-29840688 None:intergenic 25.0%
!! ATTACTTGACATTCTTTTGT+CGG + chr8.4:29838764-29838783 MS.gene012129:CDS 25.0%
!! TAAGATATTAGACGTCTTTT+TGG - chr8.4:29838988-29839007 None:intergenic 25.0%
!! TAGATTCCATTTTCTTTTAG+TGG + chr8.4:29836846-29836865 MS.gene012129:intron 25.0%
!! TATTCTTTTGCAAATCAAAC+GGG - chr8.4:29840121-29840140 None:intergenic 25.0%
!! TCATTTTATCTCCTTATTAC+AGG + chr8.4:29840448-29840467 MS.gene012129:intron 25.0%
!! TTGATAACAAAATGATACTC+TGG + chr8.4:29839593-29839612 MS.gene012129:CDS 25.0%
!! TTTAAACCTTTTCTCATTTC+AGG + chr8.4:29840034-29840053 MS.gene012129:intron 25.0%
!! TTTTGCTAACAATAACTTAG+TGG + chr8.4:29840589-29840608 MS.gene012129:CDS 25.0%
!! TTTTTCTAGACTAATTTTGC+TGG - chr8.4:29839650-29839669 None:intergenic 25.0%
!!! GAAATTATTTTAGACCTTTC+TGG + chr8.4:29839123-29839142 MS.gene012129:CDS 25.0%
!!! TCTGGTATGAATCTTATTTT+TGG + chr8.4:29839141-29839160 MS.gene012129:intron 25.0%
!!! TTAGTATTGCTTTTGTCAAA+TGG + chr8.4:29839361-29839380 MS.gene012129:intron 25.0%
!!! TTTTTTCTTTTGCCACAAAA+GGG - chr8.4:29839689-29839708 None:intergenic 25.0%
!!! TTTTTTTCTTTTGCCACAAA+AGG - chr8.4:29839690-29839709 None:intergenic 25.0%
AAAGAAACCTGAGCTTAAAA+TGG + chr8.4:29837477-29837496 MS.gene012129:CDS 30.0%
AACCAAGTCTCTAAATAGTT+TGG + chr8.4:29836618-29836637 MS.gene012129:CDS 30.0%
AACCATAATGCTCGAAAAAA+TGG + chr8.4:29841563-29841582 MS.gene012129:CDS 30.0%
AAGAAAAATAGCACACTAAC+AGG + chr8.4:29835974-29835993 MS.gene012129:CDS 30.0%
AAGATACAGCAGTAATTCAA+AGG + chr8.4:29841535-29841554 MS.gene012129:CDS 30.0%
AATATCTTATAGCACATAGG+TGG + chr8.4:29838999-29839018 MS.gene012129:intron 30.0%
AATCTTGAAAAAGCTTCCTT+TGG + chr8.4:29837645-29837664 MS.gene012129:CDS 30.0%
AATTGTTAGAACAGCAAATC+CGG - chr8.4:29836455-29836474 None:intergenic 30.0%
ACCATAATGCTCGAAAAAAT+GGG + chr8.4:29841564-29841583 MS.gene012129:CDS 30.0%
ACCTCATATTTGCAAGAAAT+TGG - chr8.4:29838597-29838616 None:intergenic 30.0%
AGAAATCAAGGTTGTCAAAA+AGG + chr8.4:29840487-29840506 MS.gene012129:CDS 30.0%
AGATACAGCAGTAATTCAAA+GGG + chr8.4:29841536-29841555 MS.gene012129:CDS 30.0%
AGTGTCTTAAAATGTACCAA+AGG - chr8.4:29837664-29837683 None:intergenic 30.0%
ATAACTGTCAAGTATAGGAA+TGG + chr8.4:29836971-29836990 MS.gene012129:CDS 30.0%
ATCATCTTTGCTTTGTAAAG+AGG - chr8.4:29841111-29841130 None:intergenic 30.0%
ATGAGGCAACAAAAGAAATA+AGG + chr8.4:29841865-29841884 MS.gene012129:CDS 30.0%
ATGAGTCAATGTAATATTGC+TGG - chr8.4:29837618-29837637 None:intergenic 30.0%
ATGTGGCTAAAGAAAACATA+CGG + chr8.4:29837538-29837557 MS.gene012129:CDS 30.0%
ATTAGGATCAAGTCATATGA+AGG - chr8.4:29841699-29841718 None:intergenic 30.0%
ATTTCTTGCAAATATGAGGT+TGG + chr8.4:29838597-29838616 MS.gene012129:intron 30.0%
CAACAACAATGACAAATGTT+GGG - chr8.4:29840924-29840943 None:intergenic 30.0%
CAGAAAAGTAACTGCTTATT+AGG + chr8.4:29841357-29841376 MS.gene012129:CDS 30.0%
CCAAGATGTTATTGAGTAAA+TGG - chr8.4:29838857-29838876 None:intergenic 30.0%
CCATTTACTCAATAACATCT+TGG + chr8.4:29838854-29838873 MS.gene012129:CDS 30.0%
GATAACGAAGTAATAAGAGA+GGG + chr8.4:29837511-29837530 MS.gene012129:CDS 30.0%
GATGTTATATGGATGAGTAA+GGG + chr8.4:29837737-29837756 MS.gene012129:intron 30.0%
GGTCTCATTATATGAAAGAT+CGG - chr8.4:29837053-29837072 None:intergenic 30.0%
GTAGATTAATTACATCCAAG+TGG + chr8.4:29840725-29840744 MS.gene012129:CDS 30.0%
TAACATCTTGGATATAAGCA+AGG + chr8.4:29838866-29838885 MS.gene012129:CDS 30.0%
TCAACAACAATGACAAATGT+TGG - chr8.4:29840925-29840944 None:intergenic 30.0%
TCACTATCACCATAAGAATT+TGG - chr8.4:29839484-29839503 None:intergenic 30.0%
TGTAAAGCGTAGACATAAAT+AGG + chr8.4:29840272-29840291 MS.gene012129:intron 30.0%
TTAGGATCAAGTCATATGAA+GGG - chr8.4:29841698-29841717 None:intergenic 30.0%
TTATTAGAAGAATCCCAAAC+CGG - chr8.4:29837298-29837317 None:intergenic 30.0%
TTCATATGACTTGATCCTAA+TGG + chr8.4:29841698-29841717 MS.gene012129:CDS 30.0%
TTCATATGCTGCAAATGAAT+TGG - chr8.4:29837074-29837093 None:intergenic 30.0%
! AAATAATTGCTCTAAGCATG+AGG - chr8.4:29838931-29838950 None:intergenic 30.0%
! AAGTTATTCTAGAGAGCTTA+TGG - chr8.4:29837877-29837896 None:intergenic 30.0%
! ACTCATATTCGTTGATAAGT+GGG + chr8.4:29836256-29836275 MS.gene012129:intron 30.0%
! CATACCAAGAAAGCATATAA+TGG + chr8.4:29838381-29838400 MS.gene012129:CDS 30.0%
! GATATGACACTTCTTATTTC+AGG - chr8.4:29840670-29840689 None:intergenic 30.0%
! GATGTTTTCATAAGTTATCC+TGG - chr8.4:29838084-29838103 None:intergenic 30.0%
! TACCAAGAAAGCATATAATG+GGG + chr8.4:29838383-29838402 MS.gene012129:CDS 30.0%
! TCTTTTTGTGAGTGAAAGAA+TGG - chr8.4:29842033-29842052 None:intergenic 30.0%
! TGATAACGAAGTAATAAGAG+AGG + chr8.4:29837510-29837529 MS.gene012129:CDS 30.0%
!! AACTAGTTGATAAGCATAGT+GGG + chr8.4:29837380-29837399 MS.gene012129:CDS 30.0%
!! AAGAAGTGTTTATCCAAACA+AGG - chr8.4:29841777-29841796 None:intergenic 30.0%
!! AGGATTAAGTAATGGATACA+TGG + chr8.4:29841377-29841396 MS.gene012129:CDS 30.0%
!! AGTTAAGATTAGTCTTCCAT+CGG - chr8.4:29839408-29839427 None:intergenic 30.0%
!! CAGAATAACCAATGTTTTGA+AGG - chr8.4:29838425-29838444 None:intergenic 30.0%
!! TGCATTTTGATATTGACAGA+TGG + chr8.4:29838484-29838503 MS.gene012129:CDS 30.0%
!!! AAGGAAGCTTTTTCAAGATT+AGG - chr8.4:29837645-29837664 None:intergenic 30.0%
!!! CTAATAAGCAGTTACTTTTC+TGG - chr8.4:29841359-29841378 None:intergenic 30.0%
!!! GCCATTATTTTGGTATATGT+AGG + chr8.4:29836531-29836550 MS.gene012129:intron 30.0%
!!! TGATCTTATTTTGGCATAGT+AGG + chr8.4:29840338-29840357 MS.gene012129:intron 30.0%
AACACAGAATCCCATTTACT+CGG - chr8.4:29839831-29839850 None:intergenic 35.0%
AAGAAAATTCCACAAGGATG+TGG + chr8.4:29836000-29836019 MS.gene012129:CDS 35.0%
AATAAAGCAGATGCCAAAGA+TGG + chr8.4:29841836-29841855 MS.gene012129:intron 35.0%
AATGGAAAGAAGTCTCTTGA+AGG + chr8.4:29841492-29841511 MS.gene012129:CDS 35.0%
ACAACTGCACTTTATAGTGT+AGG + chr8.4:29837343-29837362 MS.gene012129:CDS 35.0%
ACAATGACAAATGTTGGGTT+TGG - chr8.4:29840919-29840938 None:intergenic 35.0%
ACTCGATAACTGTCAAGTAT+AGG + chr8.4:29836966-29836985 MS.gene012129:CDS 35.0%
AGAGAAACCTTGACATCTTA+AGG + chr8.4:29842050-29842069 MS.gene012129:CDS 35.0%
AGCATTTCATAGAGACTTGA+AGG + chr8.4:29837003-29837022 MS.gene012129:CDS 35.0%
AGCCAAACTATTTAGAGACT+TGG - chr8.4:29836623-29836642 None:intergenic 35.0%
AGTATTTGACAGAACGATTC+AGG + chr8.4:29840141-29840160 MS.gene012129:intron 35.0%
AGTCTGTTTGACAGAATTGA+TGG + chr8.4:29837809-29837828 MS.gene012129:intron 35.0%
AGTGAAACAAGTAGGATTAG+TGG + chr8.4:29841453-29841472 MS.gene012129:CDS 35.0%
ATAATCGCATTAGTGTTCCT+GGG - chr8.4:29840517-29840536 None:intergenic 35.0%
ATCAAGGTTGTCAAAAAGGA+AGG + chr8.4:29840491-29840510 MS.gene012129:CDS 35.0%
ATCAATTCTGTCAAACAGAC+TGG - chr8.4:29837810-29837829 None:intergenic 35.0%
ATGATATGCCAAAGCTAGTT+CGG + chr8.4:29839228-29839247 MS.gene012129:CDS 35.0%
ATGTATTTGACCTCTCAAGA+GGG + chr8.4:29837406-29837425 MS.gene012129:CDS 35.0%
ATTAACTGACCATGATTGCT+AGG - chr8.4:29836093-29836112 None:intergenic 35.0%
ATTGAGTAAATGGAGCAATG+CGG - chr8.4:29838847-29838866 None:intergenic 35.0%
ATTGTGTTTCTTTCAACACC+AGG - chr8.4:29841648-29841667 None:intergenic 35.0%
CAACTGCACTTTATAGTGTA+GGG + chr8.4:29837344-29837363 MS.gene012129:CDS 35.0%
CGATGTTATATGGATGAGTA+AGG + chr8.4:29837736-29837755 MS.gene012129:intron 35.0%
CTAAAGGTAGTGAAACAAGT+AGG + chr8.4:29841445-29841464 MS.gene012129:CDS 35.0%
GAAGACTCAATAAGTATAGC+TGG + chr8.4:29837187-29837206 MS.gene012129:CDS 35.0%
GAAGCCAAATGTTTAGAAGT+GGG + chr8.4:29841957-29841976 MS.gene012129:CDS 35.0%
GAATAGATTTGCACCTTGTT+TGG + chr8.4:29841761-29841780 MS.gene012129:intron 35.0%
GACATTGAGTAGTTGAATAC+TGG - chr8.4:29836039-29836058 None:intergenic 35.0%
GATGAGTAAGAAACTTGTAG+AGG - chr8.4:29839191-29839210 None:intergenic 35.0%
GCAAAAGGTGAAGATTCTAA+AGG + chr8.4:29841429-29841448 MS.gene012129:CDS 35.0%
GCAAGGTGATATATAAGCTA+AGG + chr8.4:29838883-29838902 MS.gene012129:intron 35.0%
GCCAATTTCTTGCAAATATG+AGG + chr8.4:29838593-29838612 MS.gene012129:CDS 35.0%
GCCGATTAATCCAACAAAAT+TGG - chr8.4:29836513-29836532 None:intergenic 35.0%
GCTATACTTATTGAGTCTTC+TGG - chr8.4:29837187-29837206 None:intergenic 35.0%
GGTTCAAGTAAAGCTATGAA+TGG + chr8.4:29841474-29841493 MS.gene012129:CDS 35.0%
GTTATGCTAGCTATCTTGAT+TGG + chr8.4:29836553-29836572 MS.gene012129:CDS 35.0%
TAGACTAGTGTCAAAAACGT+GGG - chr8.4:29839745-29839764 None:intergenic 35.0%
TAGACTTGAGCACAGATATA+TGG + chr8.4:29840956-29840975 MS.gene012129:CDS 35.0%
TATAATCGCATTAGTGTTCC+TGG - chr8.4:29840518-29840537 None:intergenic 35.0%
TATAGCAAACACTTCGTTGT+CGG + chr8.4:29836356-29836375 MS.gene012129:intron 35.0%
TATGTATTTGACCTCTCAAG+AGG + chr8.4:29837405-29837424 MS.gene012129:CDS 35.0%
TCAAGTCTCTATGAAATGCT+TGG - chr8.4:29837003-29837022 None:intergenic 35.0%
TCACTGTGTATTATCGTCAT+TGG + chr8.4:29838454-29838473 MS.gene012129:CDS 35.0%
TCCAAGTGGTTACAGAAAAA+CGG + chr8.4:29840739-29840758 MS.gene012129:CDS 35.0%
TCCATCAGCTTAAAGTCAAT+TGG - chr8.4:29842005-29842024 None:intergenic 35.0%
TCTAATCTTGTAACTGCCAA+TGG + chr8.4:29841285-29841304 MS.gene012129:CDS 35.0%
TCTTTGTGAAATGCCATGTT+AGG - chr8.4:29836591-29836610 None:intergenic 35.0%
TGAAAGAGCCTTCAAAACAT+TGG + chr8.4:29838414-29838433 MS.gene012129:CDS 35.0%
TGAAGCCAAATGTTTAGAAG+TGG + chr8.4:29841956-29841975 MS.gene012129:CDS 35.0%
TGTGGCTAAAGAAAACATAC+GGG + chr8.4:29837539-29837558 MS.gene012129:CDS 35.0%
TGTTAGCTGCAGTTACAATA+TGG + chr8.4:29836152-29836171 MS.gene012129:intron 35.0%
TTACAGGTTAATAAGATGGG+TGG + chr8.4:29840464-29840483 MS.gene012129:intron 35.0%
TTGAGGATCAACTTGTAAAC+TGG + chr8.4:29836286-29836305 MS.gene012129:intron 35.0%
TTGATACTAGAAAAGAGCCA+CGG + chr8.4:29836207-29836226 MS.gene012129:intron 35.0%
TTTGTCAAATGGTTTACAGC+TGG + chr8.4:29839427-29839446 MS.gene012129:intron 35.0%
! AATTTAGAATTCAGACCCTC+CGG - chr8.4:29840877-29840896 None:intergenic 35.0%
! ACCAAGAAAGCATATAATGG+GGG + chr8.4:29838384-29838403 MS.gene012129:CDS 35.0%
! ATTGAAAACTGTCCCTTTTG+TGG + chr8.4:29839674-29839693 MS.gene012129:intron 35.0%
! ATTGACAGATGGAGTATCAA+AGG + chr8.4:29838495-29838514 MS.gene012129:CDS 35.0%
! GACTCATATTCGTTGATAAG+TGG + chr8.4:29836255-29836274 MS.gene012129:intron 35.0%
! GCTCTTCATAGCATTTTCTT+TGG + chr8.4:29838695-29838714 MS.gene012129:intron 35.0%
! GGATTAATCGGCCATTATTT+TGG + chr8.4:29836521-29836540 MS.gene012129:intron 35.0%
! GGTTCTGACATATCTGAAAT+TGG + chr8.4:29841258-29841277 MS.gene012129:CDS 35.0%
! TTCTCTTTGTTTGTCTCCAT+TGG - chr8.4:29841304-29841323 None:intergenic 35.0%
!! AAAAGCATTGTTGCAGTTGT+GGG + chr8.4:29837316-29837335 MS.gene012129:CDS 35.0%
!! AAGAAGTGTCATATCAATGC+AGG + chr8.4:29840675-29840694 MS.gene012129:intron 35.0%
!! ATGCTGATTTGTTTGCTCAA+AGG - chr8.4:29839946-29839965 None:intergenic 35.0%
!! GAACTAGTTGATAAGCATAG+TGG + chr8.4:29837379-29837398 MS.gene012129:CDS 35.0%
!! GTTCTCATGTTGCTTCATTT+TGG - chr8.4:29839551-29839570 None:intergenic 35.0%
!! TAAAAGCATTGTTGCAGTTG+TGG + chr8.4:29837315-29837334 MS.gene012129:CDS 35.0%
!! TATTTTGGACGACGTCATAA+AGG + chr8.4:29841134-29841153 MS.gene012129:CDS 35.0%
!!! GCTATTTTTCTTCCAACAAG+TGG - chr8.4:29835966-29835985 None:intergenic 35.0%
!!! TCCCATTTTTTCGAGCATTA+TGG - chr8.4:29841568-29841587 None:intergenic 35.0%
AAAAGAGCCACGGTTATTGA+AGG + chr8.4:29836217-29836236 MS.gene012129:intron 40.0%
AATGTTCCACATCCTCAAGA+TGG - chr8.4:29836677-29836696 None:intergenic 40.0%
ACACAGAATCCCATTTACTC+GGG - chr8.4:29839830-29839849 None:intergenic 40.0%
ACACGAAACTGTAATGCCAT+CGG - chr8.4:29838664-29838683 None:intergenic 40.0%
AGAAGTCTCTTGAAGGTTTG+AGG + chr8.4:29841499-29841518 MS.gene012129:CDS 40.0%
AGGCAGAAGAAAATTCCACA+AGG + chr8.4:29835994-29836013 MS.gene012129:CDS 40.0%
AGTCAAATTCTGCCTCTTCT+AGG - chr8.4:29839041-29839060 None:intergenic 40.0%
AGTGGCATTCAAAAGGCTTT+CGG - chr8.4:29839994-29840013 None:intergenic 40.0%
ATAGCAACAAGTCTGCGATT+TGG + chr8.4:29837101-29837120 MS.gene012129:CDS 40.0%
ATCAAAAACGTGCATGCACT+TGG - chr8.4:29835924-29835943 None:intergenic 40.0%
ATGTTCCACATCCTCAAGAT+GGG - chr8.4:29836676-29836695 None:intergenic 40.0%
ATGTTGTTCAGTGGTATCCA+CGG - chr8.4:29840558-29840577 None:intergenic 40.0%
ATTCCATTCAGATGCTTCCA+TGG - chr8.4:29840773-29840792 None:intergenic 40.0%
CAAATGTTTAGAAGTGGGCA+TGG + chr8.4:29841962-29841981 MS.gene012129:CDS 40.0%
CACATACCTGACAATCCATT+AGG - chr8.4:29841716-29841735 None:intergenic 40.0%
CACTAATCCTTCAATAACCG+TGG - chr8.4:29836227-29836246 None:intergenic 40.0%
CATGCCCACTTCTAAACATT+TGG - chr8.4:29841964-29841983 None:intergenic 40.0%
CTAGACTAGTGTCAAAAACG+TGG - chr8.4:29839746-29839765 None:intergenic 40.0%
CTCATGGATTCATACATCTG+CGG - chr8.4:29836905-29836924 None:intergenic 40.0%
CTTATTTCAGTAAGCTCTCC+AGG + chr8.4:29838063-29838082 MS.gene012129:intron 40.0%
CTTGGTGAGTAAGACTCTTA+GGG + chr8.4:29840095-29840114 MS.gene012129:intron 40.0%
GAACAACTTGATCCTGTCAA+TGG + chr8.4:29837130-29837149 MS.gene012129:CDS 40.0%
GACTTGACAATGTTGTTCAG+TGG - chr8.4:29840567-29840586 None:intergenic 40.0%
GAGTATGTTATCAGAAGCCA+CGG + chr8.4:29836742-29836761 MS.gene012129:CDS 40.0%
GCAGATGTATGAATCCATGA+GGG + chr8.4:29836904-29836923 MS.gene012129:intron 40.0%
GTCTACTCACTATCCTAACA+TGG + chr8.4:29836575-29836594 MS.gene012129:CDS 40.0%
TAAGATGGGTGGAGAAATCA+AGG + chr8.4:29840475-29840494 MS.gene012129:CDS 40.0%
TACAGCAGTAATTCAAAGGG+TGG + chr8.4:29841539-29841558 MS.gene012129:CDS 40.0%
TAGTGTAGGGCAGTTAATGA+AGG + chr8.4:29837357-29837376 MS.gene012129:CDS 40.0%
TATAGCACATAGGTGGAATC+TGG + chr8.4:29839006-29839025 MS.gene012129:intron 40.0%
TCACCTTGAAGCAAGAAGAA+AGG + chr8.4:29838546-29838565 MS.gene012129:CDS 40.0%
TCATGGATTCATACATCTGC+GGG - chr8.4:29836904-29836923 None:intergenic 40.0%
TCCCCCATTATATGCTTTCT+TGG - chr8.4:29838388-29838407 None:intergenic 40.0%
TCTTCATGAACCTCATGACT+TGG - chr8.4:29837577-29837596 None:intergenic 40.0%
TCTTTGCATTGTCAGATCCT+TGG + chr8.4:29840077-29840096 MS.gene012129:CDS 40.0%
TGATATGCCAAAGCTAGTTC+GGG + chr8.4:29839229-29839248 MS.gene012129:CDS 40.0%
TGCATTACAGTCATGAACTG+AGG + chr8.4:29838718-29838737 MS.gene012129:intron 40.0%
TGGAAAACTTGTCCTAGAAG+AGG + chr8.4:29839026-29839045 MS.gene012129:CDS 40.0%
TGGAGACAAACAAAGAGAAG+AGG + chr8.4:29841305-29841324 MS.gene012129:CDS 40.0%
TGTAAGTAGAGGGTCATTTG+TGG - chr8.4:29837449-29837468 None:intergenic 40.0%
TTATATGGATGAGTAAGGGC+CGG + chr8.4:29837741-29837760 MS.gene012129:intron 40.0%
TTGTTTATCCAAACAAGCCC+AGG + chr8.4:29838258-29838277 MS.gene012129:intron 40.0%
! AAGAAAGCATATAATGGGGG+AGG + chr8.4:29838387-29838406 MS.gene012129:CDS 40.0%
! ACCTTTTCTCATTTCAGGCA+CGG + chr8.4:29840039-29840058 MS.gene012129:intron 40.0%
! AGGCAGAATTTGACTTTGGA+AGG + chr8.4:29839046-29839065 MS.gene012129:CDS 40.0%
! CTTCTTTTTCCACATCCTTG+TGG - chr8.4:29836012-29836031 None:intergenic 40.0%
! GAAGAGGCAGAATTTGACTT+TGG + chr8.4:29839042-29839061 MS.gene012129:CDS 40.0%
! GCCAATTGACTTTAAGCTGA+TGG + chr8.4:29842001-29842020 MS.gene012129:CDS 40.0%
! GGCAGAATTTGACTTTGGAA+GGG + chr8.4:29839047-29839066 MS.gene012129:CDS 40.0%
! GTCACATTATTCTGAGAGGA+TGG + chr8.4:29839449-29839468 MS.gene012129:CDS 40.0%
! TGAGTGCAGTTTTTCCACAA+TGG - chr8.4:29838963-29838982 None:intergenic 40.0%
!! AGGTATTGACCCGAGTAAAT+GGG + chr8.4:29839818-29839837 MS.gene012129:intron 40.0%
!! ATGGAAGCATCTGAATGGAA+TGG + chr8.4:29840772-29840791 MS.gene012129:CDS 40.0%
!! ATTAAGCACTGAAACTCCGA+TGG + chr8.4:29839389-29839408 MS.gene012129:intron 40.0%
!! CTTGATCCTAATGGATTGTC+AGG + chr8.4:29841707-29841726 MS.gene012129:CDS 40.0%
!! CTTTTCTGGTATAGTGACGA+TGG - chr8.4:29841345-29841364 None:intergenic 40.0%
!! TAGGTATTGACCCGAGTAAA+TGG + chr8.4:29839817-29839836 MS.gene012129:intron 40.0%
!! TCAACAGCCATTTTAAGCTC+AGG - chr8.4:29837487-29837506 None:intergenic 40.0%
!! TTCTGTGTTTTGCCACTTGT+TGG + chr8.4:29835951-29835970 MS.gene012129:CDS 40.0%
AACCACGAAGACACTGTAGT+AGG - chr8.4:29836068-29836087 None:intergenic 45.0%
AAGCAAATAGCCCTCTTGAG+AGG - chr8.4:29837419-29837438 None:intergenic 45.0%
AAGCAGATGCCAAAGATGGA+TGG + chr8.4:29841840-29841859 MS.gene012129:intron 45.0%
AAGCTCCGTCTTTACGGTAT+TGG - chr8.4:29841055-29841074 None:intergenic 45.0%
AATCCGATTACTGCTGCCAT+CGG - chr8.4:29838747-29838766 None:intergenic 45.0%
ACCCTAGAGCAGAAGCAATT+CGG + chr8.4:29839511-29839530 MS.gene012129:CDS 45.0%
ACGCGAGAGCGAAATTTGTA+TGG + chr8.4:29841010-29841029 MS.gene012129:CDS 45.0%
ACTTCGTTGTCGGAGATGTA+AGG + chr8.4:29836366-29836385 MS.gene012129:intron 45.0%
AGTGGTGAGTAGTATCACCT+TGG + chr8.4:29840607-29840626 MS.gene012129:intron 45.0%
ATACATCTGCGGGGGAAAAT+TGG - chr8.4:29836894-29836913 None:intergenic 45.0%
ATCCGAATTGCTTCTGCTCT+AGG - chr8.4:29839516-29839535 None:intergenic 45.0%
ATCCTACTACAGTGTCTTCG+TGG + chr8.4:29836063-29836082 MS.gene012129:CDS 45.0%
ATGGATTCATACATCTGCGG+GGG - chr8.4:29836902-29836921 None:intergenic 45.0%
ATGGGATTCTGTGCATCTGT+AGG + chr8.4:29839798-29839817 MS.gene012129:intron 45.0%
CAATTTCCCTCCAAGTCATG+AGG + chr8.4:29837564-29837583 MS.gene012129:CDS 45.0%
CACTCAAGCAGAAAGAGTTG+AGG + chr8.4:29836774-29836793 MS.gene012129:CDS 45.0%
CATGGATTCATACATCTGCG+GGG - chr8.4:29836903-29836922 None:intergenic 45.0%
CCTAAGAGTCTTACTCACCA+AGG - chr8.4:29840097-29840116 None:intergenic 45.0%
CCTGTCAATGGCGAGAAAAT+TGG + chr8.4:29837142-29837161 MS.gene012129:CDS 45.0%
CCTTGAAGCAAGAAGAAAGG+CGG + chr8.4:29838549-29838568 MS.gene012129:CDS 45.0%
CCTTGGTGAGTAAGACTCTT+AGG + chr8.4:29840094-29840113 MS.gene012129:intron 45.0%
CGCAGATGTATGAATCCATG+AGG + chr8.4:29836903-29836922 MS.gene012129:intron 45.0%
CTCAACTCTTTCTGCTTGAG+TGG - chr8.4:29836776-29836795 None:intergenic 45.0%
CTCGTCCAATACCGTAAAGA+CGG + chr8.4:29841047-29841066 MS.gene012129:CDS 45.0%
GAGCACTCATGAGACTGTTT+AGG + chr8.4:29837994-29838013 MS.gene012129:intron 45.0%
GATAAGTGGGAAGACACTTG+AGG + chr8.4:29836269-29836288 MS.gene012129:intron 45.0%
GATATGCCAAAGCTAGTTCG+GGG + chr8.4:29839230-29839249 MS.gene012129:CDS 45.0%
GCCAAAGATGGATGGATATG+AGG + chr8.4:29841848-29841867 MS.gene012129:CDS 45.0%
GCCTCATATCCATCCATCTT+TGG - chr8.4:29841852-29841871 None:intergenic 45.0%
GCTGGTCACATTATTCTGAG+AGG + chr8.4:29839445-29839464 MS.gene012129:intron 45.0%
GGCAATGCTGCTGAAAGTAA+CGG - chr8.4:29837277-29837296 None:intergenic 45.0%
GTCGGAGATGTAAGGACAAT+AGG + chr8.4:29836374-29836393 MS.gene012129:intron 45.0%
TAAGAGCGACGATTGGAATG+TGG - chr8.4:29841914-29841933 None:intergenic 45.0%
TAATAAGAGAGGGAGCGATG+TGG + chr8.4:29837521-29837540 MS.gene012129:CDS 45.0%
TATTACACCCACCTGCACAA+AGG - chr8.4:29838359-29838378 None:intergenic 45.0%
TCCGAATTGCTTCTGCTCTA+GGG - chr8.4:29839515-29839534 None:intergenic 45.0%
TCCGTGCCTGAAATGAGAAA+AGG - chr8.4:29840043-29840062 None:intergenic 45.0%
TGTGATGTTGCAAGCTCAGA+TGG + chr8.4:29841237-29841256 MS.gene012129:CDS 45.0%
TGTTGTTCAGTGGTATCCAC+GGG - chr8.4:29840557-29840576 None:intergenic 45.0%
TTCAGCCAGTGGCATTCAAA+AGG - chr8.4:29840001-29840020 None:intergenic 45.0%
! ATTTGTGTCCTGGGCTTGTT+TGG - chr8.4:29838269-29838288 None:intergenic 45.0%
! CATGAACCTCATGACTTGGA+GGG - chr8.4:29837573-29837592 None:intergenic 45.0%
! CCAATTTTCTCGCCATTGAC+AGG - chr8.4:29837145-29837164 None:intergenic 45.0%
! GAAAGCCTTTTGAATGCCAC+TGG + chr8.4:29839993-29840012 MS.gene012129:intron 45.0%
! GACTTTGGAAGGGAACTTGA+AGG + chr8.4:29839057-29839076 MS.gene012129:CDS 45.0%
! GTTACTTTCAGCAGCATTGC+CGG + chr8.4:29837276-29837295 MS.gene012129:CDS 45.0%
! TCATGAACCTCATGACTTGG+AGG - chr8.4:29837574-29837593 None:intergenic 45.0%
! TGACAGGATCAAGTTGTTCC+CGG - chr8.4:29837129-29837148 None:intergenic 45.0%
! TGGTTTGAAGTTGACGACAC+AGG + chr8.4:29839613-29839632 MS.gene012129:CDS 45.0%
! TTACGGTATTGGACGAGTCA+TGG - chr8.4:29841044-29841063 None:intergenic 45.0%
! TTTTCTCATTTCAGGCACGG+AGG + chr8.4:29840042-29840061 MS.gene012129:intron 45.0%
!! ACAAGTCTGCGATTTGGTAC+CGG + chr8.4:29837107-29837126 MS.gene012129:CDS 45.0%
!!! GCCGTTTTTCTGTAACCACT+TGG - chr8.4:29840743-29840762 None:intergenic 45.0%
AACGTCCCATCTTGAGGATG+TGG + chr8.4:29836668-29836687 MS.gene012129:CDS 50.0%
AAGACGGAGCTTCGCAAGAA+AGG + chr8.4:29841063-29841082 MS.gene012129:CDS 50.0%
AATCCATGAGGGCTGTCACA+TGG + chr8.4:29836915-29836934 MS.gene012129:CDS 50.0%
ACACCGATGGCAGCAGTAAT+CGG + chr8.4:29838741-29838760 MS.gene012129:CDS 50.0%
AGGTTCATGAAGAGAACGCC+AGG + chr8.4:29837584-29837603 MS.gene012129:CDS 50.0%
ATATTGCTGGTGACCTAGCC+TGG - chr8.4:29837605-29837624 None:intergenic 50.0%
ATCCATGAGGGCTGTCACAT+GGG + chr8.4:29836916-29836935 MS.gene012129:CDS 50.0%
CAGGTACTTCTTGCACTGCA+TGG + chr8.4:29840694-29840713 MS.gene012129:intron 50.0%
CCATTCAGATGCTTCCATGG+TGG - chr8.4:29840770-29840789 None:intergenic 50.0%
CCGCCTTTCTTCTTGCTTCA+AGG - chr8.4:29838552-29838571 None:intergenic 50.0%
CTCCTTGTATCTTCAGCCAG+TGG - chr8.4:29840012-29840031 None:intergenic 50.0%
CTCTCGCGTAGTACTTGTGA+AGG - chr8.4:29840999-29841018 None:intergenic 50.0%
CTCTTTCTGCTTGAGTGGCT+TGG - chr8.4:29836771-29836790 None:intergenic 50.0%
CTTGCGAAGCTCCGTCTTTA+CGG - chr8.4:29841061-29841080 None:intergenic 50.0%
GGCTTAACCTTTGTGCAGGT+GGG + chr8.4:29838349-29838368 MS.gene012129:intron 50.0%
GTGAACTCAGTGCAGTTCCA+AGG - chr8.4:29840627-29840646 None:intergenic 50.0%
GTGGTTACAGAAAAACGGCG+TGG + chr8.4:29840744-29840763 MS.gene012129:CDS 50.0%
GTTGCAGAAGTTCGTAACGC+AGG - chr8.4:29836651-29836670 None:intergenic 50.0%
GTTGTCAAAAAGGAAGGCCC+AGG + chr8.4:29840497-29840516 MS.gene012129:CDS 50.0%
TCATGAACTGAGGACACCGA+TGG + chr8.4:29838728-29838747 MS.gene012129:CDS 50.0%
TGAAGCAAGAAGAAAGGCGG+AGG + chr8.4:29838552-29838571 MS.gene012129:CDS 50.0%
TGAGCTGTAAGAGCGACGAT+TGG - chr8.4:29841921-29841940 None:intergenic 50.0%
TGATGCTCACTTTCCAGCTC+CGG + chr8.4:29840855-29840874 MS.gene012129:CDS 50.0%
TGGCTTAACCTTTGTGCAGG+TGG + chr8.4:29838348-29838367 MS.gene012129:intron 50.0%
TTCTGCAACGTCCCATCTTG+AGG + chr8.4:29836662-29836681 MS.gene012129:CDS 50.0%
! CAGGCAGTGGATGCTCTAAA+TGG + chr8.4:29841618-29841637 MS.gene012129:CDS 50.0%
! GAATCTCCCCGAACTAGCTT+TGG - chr8.4:29839239-29839258 None:intergenic 50.0%
! GATGCTCTAAATGGCATGCC+TGG + chr8.4:29841627-29841646 MS.gene012129:CDS 50.0%
! TGCCACTGGCTGAAGATACA+AGG + chr8.4:29840007-29840026 MS.gene012129:intron 50.0%
! TTTCAGCAGCATTGCCGGTT+TGG + chr8.4:29837281-29837300 MS.gene012129:CDS 50.0%
!! CAAGTCTGCGATTTGGTACC+GGG + chr8.4:29837108-29837127 MS.gene012129:CDS 50.0%
!! CCACCATGGAAGCATCTGAA+TGG + chr8.4:29840767-29840786 MS.gene012129:CDS 50.0%
!! GGTTGGCTTAACCTTTGTGC+AGG + chr8.4:29838345-29838364 MS.gene012129:intron 50.0%
!! TTCAGCAGCATTGCCGGTTT+GGG + chr8.4:29837282-29837301 MS.gene012129:CDS 50.0%
ACCGTTGTTGCTGTAGGCGA+CGG + chr8.4:29841591-29841610 MS.gene012129:CDS 55.0%
AGCTTCGTGGCACGTTTCTG+TGG + chr8.4:29837234-29837253 MS.gene012129:CDS 55.0%
CACCGTCAGGTACTTGAGAC+AGG - chr8.4:29837213-29837232 None:intergenic 55.0%
CATGAAGAGAACGCCAGGCT+AGG + chr8.4:29837589-29837608 MS.gene012129:CDS 55.0%
CGTGGTTCGCCTAGCAATCA+TGG + chr8.4:29836081-29836100 MS.gene012129:CDS 55.0%
GAAGTTGACGACACAGGCTG+TGG + chr8.4:29839619-29839638 MS.gene012129:CDS 55.0%
GCTTCGTGGCACGTTTCTGT+GGG + chr8.4:29837235-29837254 MS.gene012129:CDS 55.0%
GGCCTGTCTCAAGTACCTGA+CGG + chr8.4:29837208-29837227 MS.gene012129:CDS 55.0%
TACCTGACGGTGTAGCTTCG+TGG + chr8.4:29837221-29837240 MS.gene012129:CDS 55.0%
TCCGTCGCCTACAGCAACAA+CGG - chr8.4:29841595-29841614 None:intergenic 55.0%
!! CTTGAGTGGCTTGGTTACCG+TGG - chr8.4:29836762-29836781 None:intergenic 55.0%
CATGCGACTAACTGCACCCG+TGG + chr8.4:29840538-29840557 MS.gene012129:CDS 60.0%
GAAAAACGGCGTGGCCACCA+TGG + chr8.4:29840753-29840772 MS.gene012129:CDS 60.0%
GAATTCAGACCCTCCGGAGC+TGG - chr8.4:29840871-29840890 None:intergenic 60.0%
GCTCACTTTCCAGCTCCGGA+GGG + chr8.4:29840859-29840878 MS.gene012129:CDS 60.0%
GGAGCCACCGTTGTTGCTGT+AGG + chr8.4:29841585-29841604 MS.gene012129:CDS 60.0%
GTCGCCTACAGCAACAACGG+TGG - chr8.4:29841592-29841611 None:intergenic 60.0%
TCGGGGAGATTCTGCGAGAG+TGG + chr8.4:29839247-29839266 MS.gene012129:CDS 60.0%
TGCCACGAAGCTACACCGTC+AGG - chr8.4:29837226-29837245 None:intergenic 60.0%
TGCCCATGTGACAGCCCTCA+TGG - chr8.4:29836921-29836940 None:intergenic 60.0%
TGCTCACTTTCCAGCTCCGG+AGG + chr8.4:29840858-29840877 MS.gene012129:CDS 60.0%
TGCTGTAGGCGACGGACAAC+AGG + chr8.4:29841599-29841618 MS.gene012129:CDS 60.0%
! CATTTCAGGCACGGAGGCAC+TGG + chr8.4:29840048-29840067 MS.gene012129:intron 60.0%
AGGCGACGGACAACAGGCAG+TGG + chr8.4:29841605-29841624 MS.gene012129:CDS 65.0%
!! AGGCACGGAGGCACTGGTCT+TGG + chr8.4:29840054-29840073 MS.gene012129:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 29835914 29842070 29835914 ID=MS.gene012129
chr8.4 mRNA 29835914 29842070 29835914 ID=MS.gene012129.t1;Parent=MS.gene012129
chr8.4 exon 29835914 29836102 29835914 ID=MS.gene012129.t1.exon1;Parent=MS.gene012129.t1
chr8.4 CDS 29835914 29836102 29835914 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29836553 29836795 29836553 ID=MS.gene012129.t1.exon2;Parent=MS.gene012129.t1
chr8.4 CDS 29836553 29836795 29836553 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29836908 29837666 29836908 ID=MS.gene012129.t1.exon3;Parent=MS.gene012129.t1
chr8.4 CDS 29836908 29837666 29836908 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29838367 29838614 29838367 ID=MS.gene012129.t1.exon4;Parent=MS.gene012129.t1
chr8.4 CDS 29838367 29838614 29838367 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29838728 29838887 29838728 ID=MS.gene012129.t1.exon5;Parent=MS.gene012129.t1
chr8.4 CDS 29838728 29838887 29838728 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29839018 29839144 29839018 ID=MS.gene012129.t1.exon6;Parent=MS.gene012129.t1
chr8.4 CDS 29839018 29839144 29839018 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29839228 29839317 29839228 ID=MS.gene012129.t1.exon7;Parent=MS.gene012129.t1
chr8.4 CDS 29839228 29839317 29839228 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29839446 29839640 29839446 ID=MS.gene012129.t1.exon8;Parent=MS.gene012129.t1
chr8.4 CDS 29839446 29839640 29839446 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29839820 29839889 29839820 ID=MS.gene012129.t1.exon9;Parent=MS.gene012129.t1
chr8.4 CDS 29839820 29839889 29839820 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29840056 29840098 29840056 ID=MS.gene012129.t1.exon10;Parent=MS.gene012129.t1
chr8.4 CDS 29840056 29840098 29840056 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29840470 29840610 29840470 ID=MS.gene012129.t1.exon11;Parent=MS.gene012129.t1
chr8.4 CDS 29840470 29840610 29840470 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29840697 29841728 29840697 ID=MS.gene012129.t1.exon12;Parent=MS.gene012129.t1
chr8.4 CDS 29840697 29841728 29840697 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
chr8.4 exon 29841846 29842070 29841846 ID=MS.gene012129.t1.exon13;Parent=MS.gene012129.t1
chr8.4 CDS 29841846 29842070 29841846 ID=cds.MS.gene012129.t1;Parent=MS.gene012129.t1
Gene Sequence

>MS.gene012129

ATGGCTACCAAGTGCATGCACGTTTTTGATAGATTGCTTCTGTGTTTTGCCACTTGTTGGAAGAAAAATAGCACACTAACAGGCAGAAGAAAATTCCACAAGGATGTGGAAAAAGAAGAATTCCAGTATTCAACTACTCAATGTCTCTCATCCTACTACAGTGTCTTCGTGGTTCGCCTAGCAATCATGGTCAGTTAATTTTTTCCTTATATGATGTTACAATTTTGAATTTTATTAGTGTTAGCTGCAGTTACAATATGGTTTATGTGCTTCGAGATATTCATTCATATTTATTGATACTAGAAAAGAGCCACGGTTATTGAAGGATTAGTGTTGAGTATGACTCATATTCGTTGATAAGTGGGAAGACACTTGAGGATCAACTTGTAAACTGGACCGTAGTATTTAAACAAATTTTTGATCAACTTGTTCAATACAAAACTATAGCAAACACTTCGTTGTCGGAGATGTAAGGACAATAGGACGAATTGCGTGATCAATCATTGTGTTTTTGTGCGTTTATCTTCTTACATTAGTACCGGATTTGCTGTTCTAACAATTAGAGTAGACCCTTTGTTGTGAAGATAAATAAATAACCAATTTTGTTGGATTAATCGGCCATTATTTTGGTATATGTAGGTTATGCTAGCTATCTTGATTGGTCTACTCACTATCCTAACATGGCATTTCACAAAGATTTATACAACCAAGTCTCTAAATAGTTTGGCTTACGACCTGCGTTACGAACTTCTGCAACGTCCCATCTTGAGGATGTGGAACATTTTGAACTCTACTGCTGAAATCACAACTGCTCAAGTTAAGTTGTCTGAGTATGTTATCAGAAGCCACGGTAACCAAGCCACTCAAGCAGAAAGAGTTGAGGTTAACTTTTATCTATTCATTGTACTCTTCCTTTGCTATAAGTTAGAATTTAGATTCCATTTTCTTTTAGTGGTTTATTACTTATTTGTATTGTTCCAATTTTCCCCCGCAGATGTATGAATCCATGAGGGCTGTCACATGGGCACTATTTGCTAGTCGAAAAGCTCTCAACTCGATAACTGTCAAGTATAGGAATGGTTTTGTCCAAGCATTTCATAGAGACTTGAAGGATAATAATATTTTTTACATCTACACCGATCTTTCATATAATGAGACCAATTCATTTGCAGCATATGAAGACACTCATAGCAACAAGTCTGCGATTTGGTACCGGGAACAACTTGATCCTGTCAATGGCGAGAAAATTGGAAAAGCAATGAAAATTGCACCAGAAGACTCAATAAGTATAGCTGGCCTGTCTCAAGTACCTGACGGTGTAGCTTCGTGGCACGTTTCTGTGGGCAAGTTTACAGATTCACCGTTACTTTCAGCAGCATTGCCGGTTTGGGATTCTTCTAATAAAAGCATTGTTGCAGTTGTGGGAGTTACAACTGCACTTTATAGTGTAGGGCAGTTAATGAAGGAACTAGTTGATAAGCATAGTGGGCATATGTATTTGACCTCTCAAGAGGGCTATTTGCTTGCAACTTCCACAAATGACCCTCTACTTACAAATTCAACAAAGAAACCTGAGCTTAAAATGGCTGTTGACTGTGATAACGAAGTAATAAGAGAGGGAGCGATGTGGCTAAAGAAAACATACGGGAACAATTTCCCTCCAAGTCATGAGGTTCATGAAGAGAACGCCAGGCTAGGTCACCAGCAATATTACATTGACTCATTCTTCCTAATCTTGAAAAAGCTTCCTTTGGTACATTTTAAGACACTGCACTTGTTCCTTACATTTGATCTTATTTTTTATATTGCTTTTAAAATTTTACGATGTTATATGGATGAGTAAGGGCCGGTTAAAGTTGACTTATTTTAGCTTTCTACTAGAATTAGCACGTGCCAGTCTGTTTGACAGAATTGATGGAAACAACTTATGACATGTGCATAACTTGTTTTCAGTTTATTTCCATAAGCTCTCTAGAATAACTTATGAAATTTAAGAAAACAGTTTAAATTTATCTTATCTTTTGTTATAGAAATATACTAGTTTGTTTGGATTGACTTATTTGAGCTTATCTACTTGCATGAGCACTCATGAGACTGTTTAGGTTAACATATAAAAGTAACTTTTGAAATGTCCATAATCTGTTTTCAGCTTATTTCAGTAAGCTCTCCAGGATAACTTATGAAAACATCTTATAGCTTATACCAAAACAGTTTGACTTTATATTATCTTTTCTTATGGAAATAACTAATAATAACCGCTTATATAAGCTGTTTATCTAAACAAGGTTATAGATTATACATGAGCACTTATACAAAGCGCTTATGCTATAAGCACTTAATTAAGTTGTTTATCCAAACAAGCCCAGGACACAAATTATAAATTTTCTACTTCTATCTTATTTCTGTTTTTTATAATGTATTTATACATTTTGGTTGGCTTAACCTTTGTGCAGGTGGGTGTAATAATCATACCAAGAAAGCATATAATGGGGGAGGCAGATGAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCATCACTGTGTATTATCGTCATTGGATGTGTTTGCATTTTGATATTGACAGATGGAGTATCAAAGGAAATGAATCTAAGAGCAGAATTAATCAGTCACCTTGAAGCAAGAAGAAAGGCGGAGGCATCGAGCAACTATAAAAGCCAATTTCTTGCAAATATGAGGTTGGTTTTTCTAGTTCTGTGTGAAAATAGAAAAAATTAAGATACACCGATGGCATTACAGTTTCGTGTTCACAAGTTTTGCTCTTCATAGCATTTTCTTTGGTGCATTACAGTCATGAACTGAGGACACCGATGGCAGCAGTAATCGGATTACTTGACATTCTTTTGTCGGATGATCATCTCACAAATGAACAATGTGCAACCGTTACTCAAATAAGAAAATGTTCAACCGCATTGCTCCATTTACTCAATAACATCTTGGATATAAGCAAGGTGATATATAAGCTAAGGTTTTTTATTTAACAACTTTTAGCCTCATGCTTAGAGCAATTATTTAAAGGAAAACCATTGTGGAAAAACTGCACTCATTCCAAAAAGACGTCTAATATCTTATAGCACATAGGTGGAATCTGGAAAACTTGTCCTAGAAGAGGCAGAATTTGACTTTGGAAGGGAACTTGAAGGACTTGTAGATATGTTTTCTGTGCAATGCATTAACCACAATGTAGAAATTATTTTAGACCTTTCTGGTATGAATCTTATTTTTGGTTGCATAATATAGGTGATTATAAACCTCTACAAGTTTCTTACTCATCTAGTTAATCTGATACAGATGATATGCCAAAGCTAGTTCGGGGAGATTCTGCGAGAGTGGTTCAAATTTTTGCAAATTTGATCAATAACTCAATCAAATTTACTCTATGTAAGTAAAAAAATTGCTTTTAGTTTTCTATACAGAATGTTCATTAGTATTGCTTTTGTCAAATGGTATCAATTAAGCACTGAAACTCCGATGGAAGACTAATCTTAACTTTGTCAAATGGTTTACAGCTGGTCACATTATTCTGAGAGGATGGTGTGAAAATCCAAATTCTTATGGTGATAGTGAAAATTCTACCCTAGAGCAGAAGCAATTCGGATGTTCTCAGAAGACCAAAATGAAGCAACATGAGAACCATTCAAAGAAGACTTCTAATATTGATAACAAAATGATACTCTGGTTTGAAGTTGACGACACAGGCTGTGGTATGACCAGCAAAATTAGTCTAGAAAAACTGCATTGAAAACTGTCCCTTTTGTGGCAAAAGAAAAAAAATAGTTTTAGGATAAATTATAATAATTTTCTTCCCACGTTTTTGACACTAGTCTAGAAAAACAGCACTGAAAATTTTCTGTGTTTCAAATGGGATTCTGTGCATCTGTAGGTATTGACCCGAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCTATCAACTACTAGACTGTAAGTGATTTAAATATTTAAAAAAAAAACTCTACAATTTTGTGAGTAAGTTACCTTTGAGCAAACAAATCAGCATTACATTATTCTCTGCTAGTTATTTGCCGAAAGCCTTTTGAATGCCACTGGCTGAAGATACAAGGAGTTTTTAAACCTTTTCTCATTTCAGGCACGGAGGCACTGGTCTTGGTCTTTGCATTGTCAGATCCTTGGTGAGTAAGACTCTTAGGGCCCGTTTGATTTGCAAAAGAATAAGTATTTGACAGAACGATTCAGGAAAAACCTTTAACTAACTAGACAACTTTTTGTCTTGTATAGTAATTGGTGGGCAGTGAACAACACAAACAAAATACTATAAAATTTATTATGATGCGCTTTCAAACTATGTAAAGCGTAGACATAAATAGGTGAAGTTTATATCTGTTGCATGTTAACATGAGCAAGAAAATCATGATCTTATTTTGGCATAGTAGGCTTTTCTTGTTGAGCTCTATAAACTCACTTGCATTTGTTTTCTTTTCTTCGTAAAGTGACATGAATCTCATAAGTTGTATATTAATTTCATTTTATCTCCTTATTACAGGTTAATAAGATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAAGGCCCAGGAACACTAATGCGATTATACATGCGACTAACTGCACCCGTGGATACCACTGAACAACATTGTCAAGTCGATTTTGCTAACAATAACTTAGTGGTGAGTAGTATCACCTTGGAACTGCACTGAGTTCACTGAAAAGATAATAAGCACACCCTGAAATAAGAAGTGTCATATCAATGCAGGTACTTCTTGCACTGCATGGCAACATGAGTAGATTAATTACATCCAAGTGGTTACAGAAAAACGGCGTGGCCACCATGGAAGCATCTGAATGGAATGGATTAACACAAATTCTGAAAGAACTATTTCGTGCAAAAACTTCAACTCATAACAATGACTTTGATGCTCACTTTCCAGCTCCGGAGGGTCTGAATTCTAAATTCATTAGCATACAGGAATTGCCAAACCCAACATTTGTCATTGTTGTTGATATTGATCTACTAGACTTGAGCACAGATATATGGAAAGAACAACTTAACTTCCTTCACAAGTACTACGCGAGAGCGAAATTTGTATGGTTACAAAACCATGACTCGTCCAATACCGTAAAGACGGAGCTTCGCAAGAAAGGACATATACTAACTGTCAACAAACCTCTTTACAAAGCAAAGATGATTCATATTTTGGACGACGTCATAAAGGAAAGAAACGTTGAAGTACAAAAGAAAAATATGAAAGAGGATGATTTGCATGAGAGTCTTGAGATTGAATATACTCATCATTGTGATGTTGCAAGCTCAGATGGTTCTGACATATCTGAAATTGGTAGTTCTAATCTTGTAACTGCCAATGGAGACAAACAAAGAGAAGAGGTAGTTAGAATCAATCCATCGTCACTATACCAGAAAAGTAACTGCTTATTAGGATTAAGTAATGGATACATGGAACATAAAGAAGCATTTATTTCAACAAGAGCAAAAGGTGAAGATTCTAAAGGTAGTGAAACAAGTAGGATTAGTGGTTCAAGTAAAGCTATGAATGGAAAGAAGTCTCTTGAAGGTTTGAGGATATTGCTTGCAGAAGATACAGCAGTAATTCAAAGGGTGGCAACCATAATGCTCGAAAAAATGGGAGCCACCGTTGTTGCTGTAGGCGACGGACAACAGGCAGTGGATGCTCTAAATGGCATGCCTGGTGTTGAAAGAAACACAATAACATCTCAAACTGAGATTCTAAGTTTCCCTTCATATGACTTGATCCTAATGGATTGTCAGGTATGTGTGTAAAATATGTAATGCTTTACTCAGAATAGATTTGCACCTTGTTTGGATAAACACTTCTTTTTAGTTTGAATTTTCTGATTTCTTTTGTGTGTTTGTGAAATAAAGCAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGAAATAAGGAAATCAGAAATTGGAACTTCATTCCACATTCCAATCGTCGCTCTTACAGCTCATGCAATGTCGTGTGATGAAGCCAAATGTTTAGAAGTGGGCATGGATGCTTATTTAACTAAGCCAATTGACTTTAAGCTGATGGAGTCTACCATTCTTTCACTCACAAAAAGAGAAACCTTGACATCTTAA
Protein sequence

>MS.gene012129.t1

MATKCMHVFDRLLLCFATCWKKNSTLTGRRKFHKDVEKEEFQYSTTQCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYDLRYELLQRPILRMWNILNSTAEITTAQVKLSEYVIRSHGNQATQAERVEMYESMRAVTWALFASRKALNSITVKYRNGFVQAFHRDLKDNNIFYIYTDLSYNETNSFAAYEDTHSNKSAIWYREQLDPVNGEKIGKAMKIAPEDSISIAGLSQVPDGVASWHVSVGKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVDKHSGHMYLTSQEGYLLATSTNDPLLTNSTKKPELKMAVDCDNEVIREGAMWLKKTYGNNFPPSHEVHEENARLGHQQYYIDSFFLILKKLPLVGVIIIPRKHIMGEADERAFKTLVILISASLCIIVIGCVCILILTDGVSKEMNLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILLSDDHLTNEQCATVTQIRKCSTALLHLLNNILDISKVESGKLVLEEAEFDFGRELEGLVDMFSVQCINHNVEIILDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHIILRGWCENPNSYGDSENSTLEQKQFGCSQKTKMKQHENHSKKTSNIDNKMILWFEVDDTGCGIDPSKWDSVFESFEQADLSTTRLHGGTGLGLCIVRSLVNKMGGEIKVVKKEGPGTLMRLYMRLTAPVDTTEQHCQVDFANNNLVVLLALHGNMSRLITSKWLQKNGVATMEASEWNGLTQILKELFRAKTSTHNNDFDAHFPAPEGLNSKFISIQELPNPTFVIVVDIDLLDLSTDIWKEQLNFLHKYYARAKFVWLQNHDSSNTVKTELRKKGHILTVNKPLYKAKMIHILDDVIKERNVEVQKKNMKEDDLHESLEIEYTHHCDVASSDGSDISEIGSSNLVTANGDKQREEVVRINPSSLYQKSNCLLGLSNGYMEHKEAFISTRAKGEDSKGSETSRISGSSKAMNGKKSLEGLRILLAEDTAVIQRVATIMLEKMGATVVAVGDGQQAVDALNGMPGVERNTITSQTEILSFPSYDLILMDCQMPKMDGYEATKEIRKSEIGTSFHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMESTILSLTKRETLTS