AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012395

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012395.t1 MTR_4g128190 59.561 319 47 5 1 319 1 237 4.12e-114 332
MS.gene012395.t1 MTR_4g128190 55.639 133 15 1 233 365 151 239 1.06e-35 130
MS.gene012395.t1 MTR_5g062790 61.059 321 75 9 2 319 4 277 1.06e-113 333
MS.gene012395.t1 MTR_5g062790 71.875 64 12 2 308 365 216 279 3.31e-18 84.3
MS.gene012395.t1 MTR_5g088640 70.492 244 47 7 12 251 13 235 2.22e-110 323
MS.gene012395.t1 MTR_5g488170 71.250 240 48 6 12 249 13 233 3.56e-110 322
MS.gene012395.t1 MTR_5g088080 71.429 238 47 6 12 247 13 231 1.56e-109 321
MS.gene012395.t1 MTR_5g088150 71.429 238 47 6 12 247 13 231 1.56e-109 321
MS.gene012395.t1 MTR_5g488210 71.429 238 47 6 12 247 13 231 1.56e-109 321
MS.gene012395.t1 MTR_5g088610 51.989 377 120 8 2 365 4 332 4.58e-102 305
MS.gene012395.t1 MTR_1g085770 56.563 320 101 9 1 316 1 286 1.29e-101 302
MS.gene012395.t1 MTR_1g085880 63.054 203 61 6 1 200 1 192 7.73e-72 222
MS.gene012395.t1 MTR_3g011610 41.104 163 93 3 11 171 37 198 3.75e-39 146
MS.gene012395.t1 MTR_1g021230 43.787 169 91 3 11 177 57 223 5.32e-39 144
MS.gene012395.t1 MTR_4g091490 49.630 135 61 3 6 134 8 141 1.65e-38 141
MS.gene012395.t1 MTR_2g011660 52.459 122 56 2 2 122 4 124 1.76e-38 140
MS.gene012395.t1 MTR_1g083630 44.500 200 95 8 2 191 4 197 4.36e-38 144
MS.gene012395.t1 MTR_3g052430 49.624 133 66 1 11 143 41 172 6.82e-38 142
MS.gene012395.t1 MTR_2g089620 55.263 114 49 2 10 122 11 123 1.42e-37 138
MS.gene012395.t1 MTR_8g042410 38.000 200 106 6 11 195 37 233 3.47e-37 141
MS.gene012395.t1 MTR_2g088170 51.613 124 59 1 5 128 23 145 4.27e-37 139
MS.gene012395.t1 MTR_3g052450 53.448 116 53 1 11 126 40 154 7.41e-37 140
MS.gene012395.t1 MTR_5g029840 52.632 114 52 2 10 122 11 123 8.25e-37 136
MS.gene012395.t1 MTR_7g076740 51.724 116 53 3 9 122 10 124 1.55e-36 134
MS.gene012395.t1 MTR_3g461490 50.427 117 56 2 11 126 12 127 1.86e-36 135
MS.gene012395.t1 MTR_1g076150 44.203 138 76 1 10 147 11 147 3.03e-36 132
MS.gene012395.t1 MTR_1g100653 49.550 111 55 1 10 120 11 120 5.49e-36 132
MS.gene012395.t1 MTR_3g074520 50.435 115 55 2 10 123 11 124 1.19e-35 133
MS.gene012395.t1 MTR_1g017000 39.326 178 92 4 11 187 12 174 1.47e-35 130
MS.gene012395.t1 MTR_5g007370 47.244 127 65 2 1 126 2 127 2.25e-35 131
MS.gene012395.t1 MTR_7g110830 43.624 149 77 3 11 153 12 159 2.29e-35 133
MS.gene012395.t1 MTR_1g043080 51.786 112 50 2 9 120 10 117 2.67e-35 130
MS.gene012395.t1 MTR_4g478180 49.206 126 61 3 10 134 12 135 3.65e-35 132
MS.gene012395.t1 MTR_4g065017 43.590 156 80 4 6 154 12 166 3.97e-35 131
MS.gene012395.t1 MTR_1g043050 50.000 116 55 2 9 122 10 124 5.08e-35 129
MS.gene012395.t1 MTR_4g073420 51.351 111 52 2 13 122 14 123 8.05e-35 129
MS.gene012395.t1 MTR_5g014990 38.679 212 108 8 11 203 12 220 8.81e-35 130
MS.gene012395.t1 MTR_2g097910 51.724 116 54 2 11 125 20 134 1.11e-34 130
MS.gene012395.t1 MTR_3g097450 50.833 120 56 3 13 131 14 131 1.43e-34 129
MS.gene012395.t1 MTR_7g115650 40.559 143 73 2 10 152 11 141 1.56e-34 126
MS.gene012395.t1 MTR_1g085040 50.442 113 54 2 11 122 12 123 2.06e-34 130
MS.gene012395.t1 MTR_4g082290 45.714 140 72 3 10 148 11 147 2.19e-34 131
MS.gene012395.t1 MTR_8g095390 53.153 111 50 2 13 122 14 123 4.45e-34 128
MS.gene012395.t1 MTR_1g085640 47.368 133 64 3 11 138 12 143 5.53e-34 129
MS.gene012395.t1 MTR_0251s0050 40.523 153 79 3 4 156 6 146 8.36e-34 126
MS.gene012395.t1 MTR_8g031360 48.739 119 58 3 6 122 8 125 9.52e-34 127
MS.gene012395.t1 MTR_7g011170 48.305 118 59 2 10 126 11 127 1.02e-33 127
MS.gene012395.t1 MTR_0008s0280 47.899 119 61 1 10 128 11 128 1.51e-33 124
MS.gene012395.t1 MTR_2g064160 45.528 123 65 2 1 122 1 122 2.35e-33 126
MS.gene012395.t1 MTR_6g012690 45.113 133 70 3 10 141 11 141 2.37e-33 127
MS.gene012395.t1 MTR_8g017440 45.312 128 67 3 11 136 12 138 2.46e-33 127
MS.gene012395.t1 MTR_1g112760 45.385 130 69 2 4 132 6 134 3.33e-33 124
MS.gene012395.t1 MTR_4g082230 44.604 139 73 3 11 148 12 147 3.84e-33 127
MS.gene012395.t1 MTR_5g042030 50.847 118 56 2 10 126 6 122 4.23e-33 125
MS.gene012395.t1 MTR_3g028740 53.271 107 48 2 11 116 22 127 7.99e-33 125
MS.gene012395.t1 MTR_4g105130 47.863 117 59 2 11 126 12 127 1.68e-32 125
MS.gene012395.t1 MTR_3g077110 47.541 122 62 2 11 131 12 132 1.69e-32 125
MS.gene012395.t1 MTR_5g079670 45.133 113 60 2 11 122 11 122 1.77e-32 121
MS.gene012395.t1 MTR_0008s0390 42.029 138 76 2 4 141 6 139 2.49e-32 122
MS.gene012395.t1 MTR_3g065440 49.580 119 58 2 10 127 11 128 3.72e-32 123
MS.gene012395.t1 MTR_7g111290 54.545 99 44 1 11 109 12 109 4.09e-32 124
MS.gene012395.t1 MTR_1g017140 54.286 105 46 2 11 114 12 115 6.96e-32 123
MS.gene012395.t1 MTR_5g078140 50.000 118 57 2 10 126 11 127 8.00e-32 122
MS.gene012395.t1 MTR_4g121460 48.571 105 53 1 10 114 11 114 8.31e-32 122
MS.gene012395.t1 MTR_4g485530 46.847 111 57 2 13 122 14 123 8.32e-32 119
MS.gene012395.t1 MTR_2g089450 48.571 105 53 1 10 114 11 114 1.43e-31 120
MS.gene012395.t1 MTR_3g083540 45.614 114 60 2 10 122 40 152 1.70e-31 121
MS.gene012395.t1 MTR_2g095520 55.446 101 43 2 11 110 12 111 2.06e-31 121
MS.gene012395.t1 MTR_8g017500 45.217 115 61 2 9 122 10 123 2.95e-31 121
MS.gene012395.t1 MTR_4g057635 53.333 105 47 2 11 114 12 115 3.06e-31 120
MS.gene012395.t1 MTR_0008s0470 40.845 142 80 2 4 145 6 143 3.21e-31 120
MS.gene012395.t1 MTR_3g103570 51.429 105 49 2 11 114 12 115 4.32e-31 121
MS.gene012395.t1 MTR_8g027345 46.789 109 57 1 10 118 11 118 4.52e-31 120
MS.gene012395.t1 MTR_7g096930 47.619 105 54 1 10 114 11 114 4.94e-31 119
MS.gene012395.t1 MTR_7g102110 51.429 105 49 2 11 114 12 115 5.37e-31 119
MS.gene012395.t1 MTR_0063s0090 48.515 101 51 1 10 110 11 110 6.36e-31 117
MS.gene012395.t1 MTR_8g017540 48.113 106 54 1 9 114 56 160 7.56e-31 121
MS.gene012395.t1 MTR_6g009430 46.154 117 61 2 11 126 12 127 8.50e-31 120
MS.gene012395.t1 MTR_1g110460 45.370 108 58 1 11 118 26 132 1.38e-30 119
MS.gene012395.t1 MTR_4g097570 54.000 100 44 2 11 109 12 110 1.44e-30 118
MS.gene012395.t1 MTR_6g013135 35.125 279 129 13 72 327 126 375 1.55e-30 120
MS.gene012395.t1 MTR_7g010210 47.273 110 56 2 9 117 10 118 1.58e-30 117
MS.gene012395.t1 MTR_0140s0030 46.789 109 56 2 10 117 12 119 1.66e-30 119
MS.gene012395.t1 MTR_0489s0020 46.789 109 56 2 10 117 12 119 1.66e-30 119
MS.gene012395.t1 MTR_7g117730 46.296 108 56 2 10 116 11 117 1.76e-30 117
MS.gene012395.t1 MTR_1g086530 47.222 108 56 1 11 118 33 139 1.77e-30 117
MS.gene012395.t1 MTR_2g099740 46.087 115 60 2 9 122 10 123 1.82e-30 120
MS.gene012395.t1 MTR_7g010210 47.273 110 56 2 9 117 10 118 2.04e-30 119
MS.gene012395.t1 MTR_5g010020 49.020 102 51 1 9 110 10 110 2.67e-30 119
MS.gene012395.t1 MTR_6g012180 47.059 102 53 1 9 110 10 110 2.83e-30 118
MS.gene012395.t1 MTR_8g098860 47.222 108 56 1 11 118 12 118 3.16e-30 118
MS.gene012395.t1 MTR_2g089420 48.598 107 54 1 8 114 8 113 3.20e-30 120
MS.gene012395.t1 MTR_5g078910 46.364 110 58 1 5 114 1 109 3.63e-30 117
MS.gene012395.t1 MTR_7g035075 46.903 113 57 2 2 114 7 116 4.22e-30 114
MS.gene012395.t1 MTR_4g100720 45.192 104 56 1 7 110 9 111 4.31e-30 114
MS.gene012395.t1 MTR_8g020490 49.020 102 51 1 9 110 6 106 5.86e-30 115
MS.gene012395.t1 MTR_1g062940 50.000 104 51 1 11 114 6 108 1.05e-29 114
MS.gene012395.t1 MTR_6g090405 48.571 105 52 2 11 114 12 115 1.07e-29 115
MS.gene012395.t1 MTR_3g039990 46.667 105 55 1 10 114 12 115 1.21e-29 116
MS.gene012395.t1 MTR_2g034790 47.619 105 54 1 10 114 11 114 1.22e-29 116
MS.gene012395.t1 MTR_4g102380 47.826 115 58 2 10 123 11 124 1.34e-29 115
MS.gene012395.t1 MTR_5g079290 44.144 111 61 1 4 114 10 119 1.86e-29 114
MS.gene012395.t1 MTR_7g087130 47.706 109 55 2 10 117 11 118 1.93e-29 116
MS.gene012395.t1 MTR_4g128670 52.475 101 46 2 11 110 12 111 1.95e-29 116
MS.gene012395.t1 MTR_6g006030 48.077 104 53 1 11 114 14 116 2.71e-29 112
MS.gene012395.t1 MTR_1g073170 49.515 103 51 1 12 114 21 122 3.01e-29 114
MS.gene012395.t1 MTR_5g079120 43.636 110 61 1 5 114 55 163 3.20e-29 115
MS.gene012395.t1 MTR_0247s0040 44.954 109 59 1 5 113 1 108 4.08e-29 111
MS.gene012395.t1 MTR_4g125520 46.078 102 54 1 9 110 10 110 4.25e-29 114
MS.gene012395.t1 MTR_4g097570 53.465 101 44 3 11 109 12 111 4.95e-29 114
MS.gene012395.t1 MTR_1g086510 44.037 109 60 1 3 111 13 120 8.77e-29 112
MS.gene012395.t1 MTR_4g029540 46.377 138 64 5 11 144 10 141 9.23e-29 113
MS.gene012395.t1 MTR_1g100667 49.515 103 51 1 12 114 14 115 1.23e-28 112
MS.gene012395.t1 MTR_6g055910 46.847 111 56 2 12 120 15 124 1.27e-28 112
MS.gene012395.t1 MTR_5g078950 44.037 109 60 1 5 113 1 108 1.42e-28 112
MS.gene012395.t1 MTR_8g017390 47.619 105 53 2 11 114 12 115 1.56e-28 116
MS.gene012395.t1 MTR_0001s0360 30.275 218 136 3 5 217 1 207 2.08e-28 111
MS.gene012395.t1 MTR_2g067420 51.000 100 48 1 11 110 14 112 2.10e-28 113
MS.gene012395.t1 MTR_0193s0090 44.545 110 60 1 5 114 1 109 2.91e-28 110
MS.gene012395.t1 MTR_8g017340 44.800 125 62 4 11 129 12 135 3.28e-28 115
MS.gene012395.t1 MTR_7g109320 52.475 101 47 1 10 110 11 110 3.47e-28 113
MS.gene012395.t1 MTR_5g079220 45.283 106 57 1 9 114 19 123 5.59e-28 110
MS.gene012395.t1 MTR_8g060940 44.340 106 58 1 5 110 1 105 5.61e-28 110
MS.gene012395.t1 MTR_8g006470 48.148 108 54 2 11 117 10 116 7.82e-28 110
MS.gene012395.t1 MTR_8g017350 44.000 125 63 4 11 129 12 135 1.01e-27 114
MS.gene012395.t1 MTR_1g045610 44.643 112 58 2 12 123 22 129 1.13e-27 109
MS.gene012395.t1 MTR_5g078860 44.545 110 60 1 5 114 1 109 1.71e-27 110
MS.gene012395.t1 MTR_7g017260 45.370 108 56 2 5 110 19 125 3.55e-27 108
MS.gene012395.t1 MTR_5g078800 43.636 110 61 1 5 114 1 109 5.32e-27 108
MS.gene012395.t1 MTR_5g078930 40.000 125 71 2 4 128 2 122 2.60e-26 105
MS.gene012395.t1 MTR_0197s0010 35.570 149 78 2 16 164 6 136 4.28e-26 104
MS.gene012395.t1 MTR_2g033170 47.115 104 54 1 11 114 24 126 6.50e-26 106
MS.gene012395.t1 MTR_4g063100 43.689 103 57 1 12 114 8 109 2.36e-25 103
MS.gene012395.t1 MTR_4g019370 48.624 109 49 4 13 120 38 140 3.92e-25 104
MS.gene012395.t1 MTR_3g077650 46.491 114 57 3 13 124 181 292 4.89e-25 105
MS.gene012395.t1 MTR_4g123040 44.444 108 59 1 11 118 24 130 7.59e-25 103
MS.gene012395.t1 MTR_5g016510 49.057 106 49 3 13 118 5 105 1.12e-24 102
MS.gene012395.t1 MTR_3g101290 47.664 107 51 3 13 119 37 138 2.37e-24 100
MS.gene012395.t1 MTR_2g096380 41.964 112 61 2 11 119 6 116 2.80e-24 100
MS.gene012395.t1 MTR_3g463400 43.519 108 59 2 11 118 131 236 8.15e-24 102
MS.gene012395.t1 MTR_4g105660 43.590 117 60 4 11 124 178 291 2.22e-23 100
MS.gene012395.t1 MTR_5g007300 48.235 85 44 0 1 85 54 138 2.87e-23 94.4
MS.gene012395.t1 MTR_4g094982 49.057 106 49 3 13 118 5 105 4.64e-23 97.4
MS.gene012395.t1 MTR_5g049190 46.078 102 53 2 13 114 19 118 5.35e-23 96.7
MS.gene012395.t1 MTR_6g027340 38.843 121 72 2 13 133 16 134 6.27e-23 95.5
MS.gene012395.t1 MTR_7g035350 48.000 100 50 2 16 115 228 325 1.14e-22 99.0
MS.gene012395.t1 MTR_6g015455 45.378 119 58 4 13 130 5 117 1.43e-22 100
MS.gene012395.t1 MTR_5g070020 41.593 113 64 2 6 118 115 225 1.78e-22 97.4
MS.gene012395.t1 MTR_3g045430 38.095 126 76 2 2 126 4 128 1.84e-22 96.3
MS.gene012395.t1 MTR_6g027360 38.095 126 76 2 8 133 73 196 2.05e-22 96.3
MS.gene012395.t1 MTR_5g010650 45.631 103 54 2 7 109 104 204 3.98e-22 97.8
MS.gene012395.t1 MTR_6g074860 40.000 105 61 2 13 117 4 106 4.09e-22 94.4
MS.gene012395.t1 MTR_5g082910 44.954 109 58 2 2 110 8 114 8.45e-22 94.4
MS.gene012395.t1 MTR_7g451170 45.217 115 53 4 13 121 191 301 1.26e-21 95.9
MS.gene012395.t1 MTR_7g037260 40.566 106 61 2 13 118 145 248 3.75e-21 93.6
MS.gene012395.t1 MTR_7g111290 55.224 67 29 1 43 109 2 67 4.56e-21 93.2
MS.gene012395.t1 MTR_3g089045 40.517 116 64 3 2 114 5 118 1.39e-20 90.9
MS.gene012395.t1 MTR_3g110028 41.121 107 61 2 8 114 80 184 1.74e-20 93.6
MS.gene012395.t1 MTR_3g110028 35.052 97 62 1 13 109 33 128 1.09e-13 72.8
MS.gene012395.t1 MTR_1g026870 41.121 107 61 2 8 114 80 184 1.97e-20 93.6
MS.gene012395.t1 MTR_1g026870 35.052 97 62 1 13 109 33 128 1.26e-13 72.8
MS.gene012395.t1 MTR_0023s0210 50.000 76 38 0 5 80 1 76 2.63e-20 84.7
MS.gene012395.t1 MTR_7g037130 40.566 106 61 2 13 118 145 248 8.51e-20 89.7
MS.gene012395.t1 MTR_7g450950 40.566 106 61 2 13 118 157 260 9.26e-20 89.4
MS.gene012395.t1 MTR_1g057980 39.640 111 65 2 11 121 78 186 9.60e-20 88.6
MS.gene012395.t1 MTR_7g061330 39.344 122 67 3 8 124 108 227 1.15e-19 90.9
MS.gene012395.t1 MTR_7g061330 32.990 97 64 1 13 109 61 156 1.16e-11 66.2
MS.gene012395.t1 MTR_7g461410 39.344 122 67 3 8 124 108 227 1.15e-19 90.9
MS.gene012395.t1 MTR_7g461410 32.990 97 64 1 13 109 61 156 1.16e-11 66.2
MS.gene012395.t1 MTR_7g061330 39.344 122 67 3 8 124 72 191 1.55e-19 90.1
MS.gene012395.t1 MTR_7g061330 32.990 97 64 1 13 109 25 120 1.22e-11 66.2
MS.gene012395.t1 MTR_4g088015 41.176 102 58 2 13 114 221 320 1.62e-19 89.7
MS.gene012395.t1 MTR_6g055910 46.835 79 39 2 44 120 18 95 2.77e-19 86.7
MS.gene012395.t1 MTR_5g041570 35.664 143 81 5 13 146 134 274 4.02e-19 88.6
MS.gene012395.t1 MTR_4g082040 40.367 109 60 3 9 114 101 207 5.72e-19 88.2
MS.gene012395.t1 MTR_7g061550 41.121 107 60 2 13 117 7 112 7.89e-19 87.0
MS.gene012395.t1 MTR_6g027370 37.097 124 76 2 13 136 99 220 2.71e-18 85.5
MS.gene012395.t1 MTR_7g086960 40.000 110 64 2 1 110 77 184 8.97e-18 84.0
MS.gene012395.t1 MTR_4g063100 48.611 72 36 1 43 114 10 80 1.07e-17 81.6
MS.gene012395.t1 MTR_2g096380 46.250 80 39 2 43 119 19 97 3.63e-17 79.7
MS.gene012395.t1 MTR_5g038910 34.579 107 67 3 16 121 29 133 3.76e-13 70.9
MS.gene012395.t1 MTR_5g038910 34.579 107 67 3 16 121 29 133 5.71e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012395.t1 AT2G26960 47.500 160 71 4 9 158 18 174 2.18e-43 155
MS.gene012395.t1 AT2G32460 50.000 120 59 1 9 128 4 122 2.34e-39 146
MS.gene012395.t1 AT2G32460 50.000 120 59 1 9 128 16 134 2.44e-39 146
MS.gene012395.t1 AT4G21440 55.263 114 49 2 10 122 11 123 1.94e-38 140
MS.gene012395.t1 AT5G55020 53.509 114 52 1 11 124 26 138 2.48e-38 144
MS.gene012395.t1 AT4G26930 48.760 121 61 1 11 131 19 138 1.00e-37 140
MS.gene012395.t1 AT5G10280 37.900 219 107 6 3 198 4 216 1.64e-37 138
MS.gene012395.t1 AT5G06100 50.000 120 59 1 10 129 31 149 2.29e-37 140
MS.gene012395.t1 AT5G56110 51.282 117 55 2 11 126 12 127 3.42e-37 137
MS.gene012395.t1 AT3G11440 49.587 121 60 1 11 131 41 160 4.21e-37 139
MS.gene012395.t1 AT5G06100 50.000 120 59 1 10 129 31 149 5.45e-37 140
MS.gene012395.t1 AT5G06100 50.000 120 59 1 10 129 31 149 5.45e-37 140
MS.gene012395.t1 AT5G06100 50.000 120 59 1 10 129 31 149 5.45e-37 140
MS.gene012395.t1 AT5G06100 50.000 120 59 1 10 129 31 149 5.45e-37 140
MS.gene012395.t1 AT1G57560 37.333 225 118 7 11 225 12 223 5.48e-37 136
MS.gene012395.t1 AT2G26950 50.420 119 58 1 9 127 14 131 7.67e-37 137
MS.gene012395.t1 AT3G11440 49.587 121 60 1 11 131 41 160 1.17e-36 139
MS.gene012395.t1 AT3G11440 49.587 121 60 1 11 131 41 160 1.17e-36 139
MS.gene012395.t1 AT3G11440 49.587 121 60 1 11 131 41 160 1.17e-36 139
MS.gene012395.t1 AT5G26660 50.000 124 60 2 11 133 12 134 1.25e-36 136
MS.gene012395.t1 AT3G61250 50.877 114 54 2 10 122 11 123 3.14e-36 134
MS.gene012395.t1 AT4G28110 53.509 114 51 2 10 122 11 123 3.71e-36 133
MS.gene012395.t1 AT4G17785 47.328 131 67 2 2 131 4 133 7.28e-36 134
MS.gene012395.t1 AT4G17785 47.328 131 67 2 2 131 4 133 7.43e-36 134
MS.gene012395.t1 AT4G05100 50.820 122 58 2 2 122 4 124 8.69e-36 133
MS.gene012395.t1 AT1G22640 50.847 118 56 2 11 127 12 128 9.40e-36 131
MS.gene012395.t1 AT5G54230 52.212 113 52 2 11 122 12 123 9.61e-36 133
MS.gene012395.t1 AT4G01680 50.000 118 57 2 11 127 12 128 1.07e-35 130
MS.gene012395.t1 AT4G38620 53.153 111 50 2 13 122 14 123 1.27e-35 131
MS.gene012395.t1 AT5G16770 49.565 115 56 2 10 123 11 124 1.40e-35 132
MS.gene012395.t1 AT5G16770 49.565 115 56 2 10 123 11 124 1.40e-35 132
MS.gene012395.t1 AT5G16770 49.565 115 56 2 10 123 11 124 2.56e-35 132
MS.gene012395.t1 AT5G16770 49.565 115 56 2 10 123 11 124 2.56e-35 132
MS.gene012395.t1 AT1G74080 38.776 196 110 6 9 197 10 202 4.12e-35 131
MS.gene012395.t1 AT4G01680 50.000 118 57 2 11 127 12 128 5.61e-35 131
MS.gene012395.t1 AT5G65230 49.593 123 60 2 10 131 11 132 7.75e-35 130
MS.gene012395.t1 AT1G57560 51.282 117 55 2 11 126 12 127 8.94e-35 129
MS.gene012395.t1 AT1G35515 49.558 113 55 2 11 122 12 123 1.16e-34 127
MS.gene012395.t1 AT4G34990 40.606 165 88 3 13 176 14 169 1.89e-34 128
MS.gene012395.t1 AT1G18570 48.305 118 59 2 10 126 12 128 3.03e-34 129
MS.gene012395.t1 AT3G02940 48.696 115 57 2 10 123 11 124 3.07e-34 129
MS.gene012395.t1 AT5G15310 48.305 118 59 2 10 126 11 127 4.12e-34 126
MS.gene012395.t1 AT2G16720 50.442 113 54 2 11 122 12 123 4.37e-34 127
MS.gene012395.t1 AT3G01140 48.305 118 59 2 10 126 11 127 4.90e-34 129
MS.gene012395.t1 AT3G02940 48.696 115 57 2 10 123 11 124 5.51e-34 128
MS.gene012395.t1 AT3G02940 48.696 115 57 2 10 123 11 124 5.51e-34 128
MS.gene012395.t1 AT1G09540 52.212 113 52 2 11 122 12 123 6.05e-34 129
MS.gene012395.t1 AT4G09460 44.697 132 66 3 13 143 14 139 6.13e-34 125
MS.gene012395.t1 AT3G01140 48.305 118 59 2 10 126 54 170 7.04e-34 129
MS.gene012395.t1 AT3G12720 50.442 113 54 2 11 122 22 133 7.70e-34 127
MS.gene012395.t1 AT5G15310 48.305 118 59 2 10 126 11 127 8.40e-34 127
MS.gene012395.t1 AT5G15310 48.305 118 59 2 10 126 11 127 8.58e-34 127
MS.gene012395.t1 AT5G12870 49.153 118 58 2 1 117 8 124 1.90e-33 125
MS.gene012395.t1 AT1G34670 50.877 114 54 2 10 122 11 123 2.07e-33 127
MS.gene012395.t1 AT3G08500 52.336 107 49 2 11 116 30 135 2.49e-33 127
MS.gene012395.t1 AT5G60890 47.059 119 61 2 9 126 10 127 6.28e-33 124
MS.gene012395.t1 AT1G18710 44.348 115 62 2 10 123 11 124 6.83e-33 124
MS.gene012395.t1 AT3G23250 47.619 105 54 1 10 114 11 114 1.02e-32 124
MS.gene012395.t1 AT5G40350 35.366 164 104 2 11 173 17 179 1.14e-32 122
MS.gene012395.t1 AT3G13540 44.444 117 63 2 7 122 19 134 1.22e-32 122
MS.gene012395.t1 AT1G74430 43.478 115 63 2 10 123 11 124 1.37e-32 123
MS.gene012395.t1 AT4G37780 47.541 122 61 3 10 129 11 131 1.85e-32 124
MS.gene012395.t1 AT1G56160 49.587 121 55 4 2 122 6 120 2.11e-32 123
MS.gene012395.t1 AT5G61420 47.059 119 61 2 9 126 10 127 2.40e-32 125
MS.gene012395.t1 AT5G07690 47.899 119 60 2 9 126 10 127 3.41e-32 124
MS.gene012395.t1 AT1G16490 39.474 190 87 7 11 180 14 195 8.09e-32 121
MS.gene012395.t1 AT5G23000 54.286 105 46 2 11 114 12 115 8.14e-32 122
MS.gene012395.t1 AT5G52600 43.382 136 66 3 11 136 12 146 9.04e-32 119
MS.gene012395.t1 AT1G06180 49.524 105 52 1 10 114 11 114 1.01e-31 120
MS.gene012395.t1 AT5G07700 47.059 119 61 2 9 126 10 127 1.21e-31 122
MS.gene012395.t1 AT5G07700 47.059 119 61 2 9 126 10 127 1.21e-31 122
MS.gene012395.t1 AT4G01680 45.385 130 57 3 11 127 12 140 1.25e-31 122
MS.gene012395.t1 AT5G14750 46.789 109 57 1 2 110 7 114 2.19e-31 118
MS.gene012395.t1 AT3G27920 48.598 107 54 1 8 114 11 116 3.21e-31 118
MS.gene012395.t1 AT3G13890 48.077 104 53 1 11 114 12 114 4.25e-31 121
MS.gene012395.t1 AT5G16600 48.305 118 59 2 10 126 11 127 4.70e-31 120
MS.gene012395.t1 AT3G49690 53.333 105 47 2 11 114 12 115 5.03e-31 120
MS.gene012395.t1 AT2G36890 48.696 115 57 2 11 124 12 125 5.64e-31 119
MS.gene012395.t1 AT2G31180 42.149 121 69 1 10 130 11 130 5.92e-31 118
MS.gene012395.t1 AT1G66230 47.458 118 60 2 10 126 11 127 7.76e-31 119
MS.gene012395.t1 AT5G14340 45.763 118 62 2 10 126 23 139 8.36e-31 118
MS.gene012395.t1 AT3G27810 36.095 169 91 3 11 163 20 187 8.45e-31 117
MS.gene012395.t1 AT2G36890 48.696 115 57 2 11 124 53 166 8.58e-31 120
MS.gene012395.t1 AT5G62320 50.413 121 51 3 10 122 12 131 1.00e-30 117
MS.gene012395.t1 AT4G22680 42.949 156 85 4 10 164 11 163 1.41e-30 117
MS.gene012395.t1 AT3G12820 48.624 109 53 2 11 117 14 121 1.76e-30 117
MS.gene012395.t1 AT5G65790 53.333 105 47 2 11 114 12 115 1.78e-30 120
MS.gene012395.t1 AT1G79180 41.259 143 80 3 11 150 14 155 1.80e-30 118
MS.gene012395.t1 AT1G08810 47.706 109 55 2 10 117 11 118 1.88e-30 117
MS.gene012395.t1 AT3G47600 47.706 109 55 2 10 117 11 118 2.31e-30 119
MS.gene012395.t1 AT1G63910 49.074 108 54 1 11 118 12 118 2.80e-30 119
MS.gene012395.t1 AT5G57620 52.727 110 49 3 11 118 12 120 3.51e-30 118
MS.gene012395.t1 AT3G28910 47.706 109 55 2 10 117 11 118 4.48e-30 117
MS.gene012395.t1 AT2G47190 44.248 113 62 1 2 114 11 122 4.52e-30 116
MS.gene012395.t1 AT5G62470 43.284 134 70 3 10 142 11 139 6.27e-30 118
MS.gene012395.t1 AT5G40330 46.465 99 52 1 12 110 13 110 8.74e-30 114
MS.gene012395.t1 AT3G01530 45.299 117 62 2 1 116 15 130 1.29e-29 113
MS.gene012395.t1 AT1G74650 46.154 104 55 1 11 114 12 114 1.68e-29 116
MS.gene012395.t1 AT1G48000 41.176 136 64 2 11 146 32 151 2.70e-29 114
MS.gene012395.t1 AT3G62610 47.664 107 54 2 10 115 11 116 2.98e-29 115
MS.gene012395.t1 AT5G49330 46.535 101 53 1 10 110 11 110 3.15e-29 115
MS.gene012395.t1 AT3G28470 50.000 100 49 1 11 110 12 110 3.37e-29 115
MS.gene012395.t1 AT2G47460 47.664 107 54 2 10 115 11 116 5.15e-29 115
MS.gene012395.t1 AT1G68320 44.444 108 59 1 11 118 19 125 5.75e-29 114
MS.gene012395.t1 AT3G24310 48.113 106 54 1 9 114 16 120 7.91e-29 113
MS.gene012395.t1 AT5G35550 33.649 211 110 5 11 194 14 221 9.10e-29 112
MS.gene012395.t1 AT5G62470 43.284 134 69 4 10 142 11 138 1.14e-28 114
MS.gene012395.t1 AT3G13890 44.248 113 53 2 11 114 12 123 3.31e-28 113
MS.gene012395.t1 AT3G60460 47.222 108 55 2 11 117 11 117 3.97e-28 112
MS.gene012395.t1 AT3G30210 45.714 105 56 1 10 114 26 129 4.27e-28 111
MS.gene012395.t1 AT1G56650 39.855 138 73 2 7 135 4 140 4.49e-28 110
MS.gene012395.t1 AT3G53200 49.038 104 52 1 11 114 9 111 5.07e-28 110
MS.gene012395.t1 AT1G25340 43.925 107 59 1 12 118 19 124 6.76e-28 110
MS.gene012395.t1 AT4G12350 33.032 221 122 7 11 208 12 229 4.10e-27 108
MS.gene012395.t1 AT1G66380 46.154 104 55 1 7 110 4 106 4.61e-27 104
MS.gene012395.t1 AT3G48920 45.455 110 59 1 5 114 12 120 5.91e-27 107
MS.gene012395.t1 AT4G13480 47.573 103 53 1 12 114 7 108 6.16e-27 107
MS.gene012395.t1 AT1G66370 45.098 102 55 1 9 110 6 106 7.20e-27 107
MS.gene012395.t1 AT1G66390 44.444 108 59 1 7 114 4 110 8.55e-26 104
MS.gene012395.t1 AT5G26660 50.549 91 43 2 44 133 14 103 9.38e-26 105
MS.gene012395.t1 AT3G46130 42.149 121 66 2 5 122 3 122 9.93e-26 104
MS.gene012395.t1 AT3G06490 46.018 113 60 1 2 114 10 121 1.04e-25 105
MS.gene012395.t1 AT5G59780 43.860 114 60 2 12 122 9 121 1.13e-25 103
MS.gene012395.t1 AT4G18770 45.528 123 63 3 11 131 215 335 1.41e-25 107
MS.gene012395.t1 AT1G79180 34.091 176 79 4 11 150 14 188 3.88e-25 104
MS.gene012395.t1 AT4G25560 45.946 111 57 2 12 120 11 120 5.88e-25 103
MS.gene012395.t1 AT5G52260 46.281 121 60 3 12 131 13 129 6.82e-25 102
MS.gene012395.t1 AT5G49620 46.154 104 55 1 11 114 26 128 2.91e-24 101
MS.gene012395.t1 AT3G50060 49.057 106 49 3 13 118 6 106 3.15e-24 101
MS.gene012395.t1 AT5G40360 44.762 105 56 2 11 115 156 258 3.92e-24 102
MS.gene012395.t1 AT1G25340 41.121 107 57 2 12 118 19 119 8.05e-24 99.8
MS.gene012395.t1 AT3G27785 42.593 108 60 2 11 118 187 292 1.01e-23 102
MS.gene012395.t1 AT1G25340 41.121 107 57 2 12 118 19 119 1.37e-23 99.8
MS.gene012395.t1 AT5G58850 44.248 113 61 2 2 114 94 204 3.51e-23 100
MS.gene012395.t1 AT4G37260 45.082 122 64 3 1 121 1 120 5.11e-23 98.6
MS.gene012395.t1 AT5G40350 34.586 133 85 2 42 173 3 134 6.62e-23 94.4
MS.gene012395.t1 AT5G67300 48.113 106 50 3 13 118 6 106 8.13e-23 97.4
MS.gene012395.t1 AT5G49620 41.880 117 55 1 11 114 26 142 1.11e-22 97.4
MS.gene012395.t1 AT2G39880 48.214 112 53 3 6 114 40 149 1.77e-22 97.8
MS.gene012395.t1 AT2G23290 47.170 106 51 3 13 118 13 113 2.53e-22 96.3
MS.gene012395.t1 AT4G33450 38.843 121 71 3 2 121 7 125 1.51e-21 92.8
MS.gene012395.t1 AT1G17950 41.379 116 59 4 13 121 5 118 1.77e-21 92.8
MS.gene012395.t1 AT3G55730 47.573 103 50 3 13 114 56 155 2.22e-21 94.7
MS.gene012395.t1 AT3G09230 45.098 102 54 2 13 114 55 154 2.50e-21 94.7
MS.gene012395.t1 AT4G32730 43.925 107 58 2 8 114 82 186 3.22e-21 95.9
MS.gene012395.t1 AT4G32730 34.021 97 63 1 13 109 35 130 8.83e-13 70.1
MS.gene012395.t1 AT4G32730 43.925 107 58 2 8 114 82 186 3.22e-21 95.9
MS.gene012395.t1 AT4G32730 34.021 97 63 1 13 109 35 130 8.83e-13 70.1
MS.gene012395.t1 AT4G32730 43.925 107 58 2 8 114 82 186 3.22e-21 95.9
MS.gene012395.t1 AT4G32730 34.021 97 63 1 13 109 35 130 8.83e-13 70.1
MS.gene012395.t1 AT4G32730 43.925 107 58 2 8 114 82 186 3.22e-21 95.9
MS.gene012395.t1 AT4G32730 34.021 97 63 1 13 109 35 130 8.83e-13 70.1
MS.gene012395.t1 AT5G11510 42.056 107 60 2 8 114 76 180 3.30e-21 95.9
MS.gene012395.t1 AT5G11510 32.990 97 64 1 13 109 29 124 3.26e-12 68.6
MS.gene012395.t1 AT5G11510 42.056 107 60 2 8 114 76 180 3.30e-21 95.9
MS.gene012395.t1 AT5G11510 32.990 97 64 1 13 109 29 124 3.26e-12 68.6
MS.gene012395.t1 AT5G11510 42.056 107 60 2 8 114 76 180 3.30e-21 95.9
MS.gene012395.t1 AT5G11510 32.990 97 64 1 13 109 29 124 3.26e-12 68.6
MS.gene012395.t1 AT5G11050 43.396 106 58 2 9 114 101 204 3.35e-21 94.7
MS.gene012395.t1 AT4G32730 43.925 107 58 2 8 114 82 186 3.39e-21 95.9
MS.gene012395.t1 AT4G32730 34.021 97 63 1 13 109 35 130 8.31e-13 70.1
MS.gene012395.t1 AT5G11510 42.056 107 60 2 8 114 76 180 4.21e-21 95.5
MS.gene012395.t1 AT5G11510 32.990 97 64 1 13 109 29 124 3.93e-12 68.2
MS.gene012395.t1 AT5G11510 42.056 107 60 2 8 114 76 180 4.80e-21 95.1
MS.gene012395.t1 AT5G11510 32.990 97 64 1 13 109 29 124 4.39e-12 67.8
MS.gene012395.t1 AT3G53200 56.338 71 30 1 44 114 9 78 4.93e-21 90.5
MS.gene012395.t1 AT3G27810 35.294 136 71 3 44 163 4 138 1.85e-20 88.2
MS.gene012395.t1 AT3G09370 36.879 141 81 3 8 142 130 268 3.21e-20 92.4
MS.gene012395.t1 AT3G09370 34.021 97 63 1 13 109 83 178 8.74e-13 69.7
MS.gene012395.t1 AT3G09370 36.879 141 81 3 8 142 125 263 3.22e-20 92.4
MS.gene012395.t1 AT3G09370 34.021 97 63 1 13 109 78 173 9.07e-13 69.7
MS.gene012395.t1 AT5G17800 40.000 120 66 3 9 124 89 206 3.65e-20 90.5
MS.gene012395.t1 AT3G09370 36.879 141 81 3 8 142 138 276 4.00e-20 92.0
MS.gene012395.t1 AT3G09370 34.021 97 63 1 13 109 91 186 1.09e-12 69.7
MS.gene012395.t1 AT2G25230 40.157 127 66 5 5 124 13 136 5.72e-20 88.2
MS.gene012395.t1 AT1G69560 38.596 114 65 3 2 112 96 207 8.66e-20 89.4
MS.gene012395.t1 AT1G69560 38.596 114 65 3 2 112 112 223 9.81e-20 89.7
MS.gene012395.t1 AT5G02320 40.909 110 62 3 8 116 122 229 2.06e-19 90.1
MS.gene012395.t1 AT5G02320 35.052 97 62 1 13 109 75 170 5.43e-13 70.5
MS.gene012395.t1 AT5G02320 40.909 110 62 3 8 116 122 229 2.06e-19 90.1
MS.gene012395.t1 AT5G02320 35.052 97 62 1 13 109 75 170 5.43e-13 70.5
MS.gene012395.t1 AT1G26780 41.000 100 57 2 11 110 96 193 2.23e-19 87.4
MS.gene012395.t1 AT5G35550 41.818 110 61 2 44 151 50 158 2.48e-19 87.0
MS.gene012395.t1 AT5G02320 40.187 107 62 2 8 114 62 166 2.71e-19 89.4
MS.gene012395.t1 AT5G02320 35.052 97 62 1 13 109 15 110 6.08e-13 70.1
MS.gene012395.t1 AT1G26780 41.121 107 58 3 11 114 96 200 3.05e-19 88.2
MS.gene012395.t1 AT1G73410 40.541 111 62 3 13 122 6 113 4.51e-19 84.7
MS.gene012395.t1 AT1G73410 40.541 111 62 3 13 122 6 113 4.73e-19 85.9
MS.gene012395.t1 AT3G12820 51.351 74 33 2 46 117 1 73 4.94e-19 84.3
MS.gene012395.t1 AT5G14750 47.826 69 35 1 46 114 17 84 5.68e-19 83.6
MS.gene012395.t1 AT1G66380 50.746 67 33 0 7 73 4 70 1.48e-18 80.9
MS.gene012395.t1 AT3G47600 49.333 75 36 2 44 117 39 112 6.88e-18 84.0
MS.gene012395.t1 AT3G46130 46.988 83 40 2 43 122 9 90 1.39e-17 81.3
MS.gene012395.t1 AT2G37630 42.056 107 59 2 13 117 4 109 1.96e-17 83.2
MS.gene012395.t1 AT5G59780 47.561 82 39 2 44 122 20 100 2.92e-17 80.1
MS.gene012395.t1 AT4G00540 40.000 120 63 5 11 127 101 214 2.95e-17 82.8
MS.gene012395.t1 AT3G46130 47.561 82 39 2 44 122 20 100 3.91e-17 80.1
MS.gene012395.t1 AT4G00540 40.000 120 63 5 11 127 99 212 4.73e-17 82.4
MS.gene012395.t1 AT3G29020 35.652 115 72 2 13 127 65 177 4.83e-17 80.1
MS.gene012395.t1 AT3G29020 38.182 110 65 3 13 121 67 174 5.37e-17 81.3
MS.gene012395.t1 AT5G40430 37.273 110 64 4 11 119 52 157 2.18e-16 78.6
MS.gene012395.t1 AT1G66380 47.887 71 36 1 44 114 8 77 8.85e-16 72.8
MS.gene012395.t1 AT1G22640 50.000 66 31 2 58 122 2 66 2.03e-14 71.6
MS.gene012395.t1 AT2G02820 33.645 107 68 3 16 121 33 137 3.12e-13 71.2
MS.gene012395.t1 AT2G02820 33.645 107 68 3 16 121 33 137 3.48e-13 70.9
MS.gene012395.t1 AT1G14350 33.645 107 68 3 16 121 28 132 6.42e-13 70.1
MS.gene012395.t1 AT1G14350 33.645 107 68 3 16 121 28 132 6.42e-13 70.1
MS.gene012395.t1 AT2G02820 33.645 107 68 3 16 121 33 137 8.75e-13 68.9
MS.gene012395.t1 AT5G39700 34.286 105 67 2 14 118 57 159 1.72e-12 65.9
MS.gene012395.t1 AT3G18100 38.144 97 58 2 12 108 545 639 2.11e-12 68.9
MS.gene012395.t1 AT3G18100 33.663 101 65 2 8 108 490 588 2.12e-11 65.9
MS.gene012395.t1 AT3G18100 38.144 97 58 2 12 108 497 591 2.25e-12 68.9
MS.gene012395.t1 AT3G18100 33.663 101 65 2 8 108 442 540 2.48e-11 65.5
MS.gene012395.t1 AT3G18100 38.144 97 58 2 12 108 384 478 2.59e-12 68.6
MS.gene012395.t1 AT3G18100 33.663 101 65 2 8 108 329 427 3.12e-11 65.1
MS.gene012395.t1 AT3G18100 38.144 97 58 2 12 108 332 426 2.79e-12 68.6
MS.gene012395.t1 AT3G18100 33.663 101 65 2 8 108 277 375 3.28e-11 65.1
MS.gene012395.t1 AT1G71030 36.250 80 49 2 50 128 5 83 3.96e-11 62.0
MS.gene012395.t1 AT1G71030 36.250 80 49 2 50 128 19 97 5.96e-11 61.6

Find 79 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATACCTCGTTCCAATTTC+TGG 0.105695 8.3:-3026216 None:intergenic
ATAAATTTGGTTGATGAAAA+AGG 0.165254 8.3:+3027542 MS.gene012395:CDS
TATATACCACAAGTGAAATT+TGG 0.178507 8.3:+3027032 MS.gene012395:CDS
ATACTACTTCAATGATTTAT+AGG 0.202569 8.3:+3027162 MS.gene012395:CDS
ACAAATTTGGTTGATGAAAA+AGG 0.207164 8.3:+3027674 MS.gene012395:CDS
GCATTCCTCTGAGATAAATT+TGG 0.210289 8.3:+3027529 MS.gene012395:CDS
ACATTGTCCTCCAAAGAAAT+TGG 0.248860 8.3:-3027704 None:intergenic
AGGAAAGAAGCCAATTTCTT+TGG 0.257544 8.3:+3027694 MS.gene012395:CDS
AGCAAGCCATGGTGACTTTA+TGG 0.262915 8.3:+3027598 MS.gene012395:CDS
ACATTATTGTAGAGCATGTT+TGG 0.311255 8.3:-3027116 None:intergenic
AAAATTCTTGATGTCATTAT+CGG 0.314551 8.3:-3026877 None:intergenic
CTTGTGAATCCTTAACTTGT+TGG 0.323790 8.3:-3026998 None:intergenic
TTTCAGTTCTTTAACATGTT+TGG 0.331177 8.3:+3026350 MS.gene012395:CDS
TTCAAATAGCCAACAAGTTA+AGG 0.336113 8.3:+3026989 MS.gene012395:CDS
TGTTATATAGACAAGAGAAT+TGG 0.344046 8.3:+3027483 MS.gene012395:CDS
GCATTCGTCTGAGACAAATT+TGG 0.360277 8.3:+3027661 MS.gene012395:CDS
TCATTCAGTTCCATCTTGTC+AGG 0.372533 8.3:-3026948 None:intergenic
AGCAAACCTTGGTGACTTCA+TGG 0.377523 8.3:+3027730 MS.gene012395:CDS
ATGTCATTATCGGATCTTCC+AGG 0.377868 8.3:-3026867 None:intergenic
AGGGAAGAAGTCAATTGCTT+TGG 0.381080 8.3:+3027562 MS.gene012395:CDS
CCATGGTGACTTTATGGATC+TGG 0.413335 8.3:+3027604 MS.gene012395:CDS
CATTATTGTAGAGCATGTTT+GGG 0.426415 8.3:-3027115 None:intergenic
ATCAATTTCAGGGGTAGCAT+TGG 0.428509 8.3:+3027278 MS.gene012395:intron
GTTAAAGAACTGAAAGACTT+TGG 0.428943 8.3:-3026342 None:intergenic
AAAGGACCCTTCTTCACATC+TGG 0.430441 8.3:-3026302 None:intergenic
TCCTCAAATTCCACCACCTA+TGG 0.435136 8.3:+3027400 MS.gene012395:CDS
ACATGTTTGGTGAATTCAAA+TGG 0.437146 8.3:+3026363 MS.gene012395:CDS
ACTTTATGGATCTGGATCTT+CGG 0.437208 8.3:+3027612 MS.gene012395:CDS
CCTTCTTCACATCTGGTTGA+AGG 0.447401 8.3:-3026295 None:intergenic
TGGAACTTCTTGTATACCTA+TGG 0.450618 8.3:+3027298 MS.gene012395:CDS
GTTATATAGACAAGAGAATT+GGG 0.451821 8.3:+3027484 MS.gene012395:CDS
CATCACAATGTCTTCATCAA+TGG 0.455355 8.3:+3026112 None:intergenic
AAAGAAGCCAATTTCTTTGG+AGG 0.456698 8.3:+3027697 MS.gene012395:CDS
TCCATAGGTGGTGGAATTTG+AGG 0.460831 8.3:-3027401 None:intergenic
TGCGTATAAAAGTGTCTCAT+TGG 0.466056 8.3:+3027454 MS.gene012395:CDS
GTCACCCTTCCCTGACAAGA+TGG 0.495250 8.3:+3026938 MS.gene012395:CDS
TGAAATGTTAAAAGCATATG+TGG 0.496688 8.3:+3026181 MS.gene012395:CDS
GTAAAAGTTGTCGTCTAAGA+TGG 0.497716 8.3:+3026264 MS.gene012395:CDS
CCTTCAACCAGATGTGAAGA+AGG 0.500980 8.3:+3026295 MS.gene012395:CDS
GAGACTCGATATAAGATGTC+AGG 0.509413 8.3:+3027422 MS.gene012395:CDS
TTCTTGTATACCTATGGCTA+TGG 0.515629 8.3:+3027304 MS.gene012395:CDS
AACGAGGTATCAAGAAATGC+GGG 0.517508 8.3:+3026227 MS.gene012395:CDS
CAGTTCCATCTTGTCAGGGA+AGG 0.522410 8.3:-3026943 None:intergenic
TGGAAGGTATGAACATTCTG+AGG 0.522722 8.3:-3027345 None:intergenic
CTTCCTTCACGTATGATGCT+TGG 0.537178 8.3:+3027371 MS.gene012395:CDS
AAACATGCTCTACAATAATG+TGG 0.540325 8.3:+3027118 MS.gene012395:CDS
TGAATTCAAATGGTCTAAGC+TGG 0.550324 8.3:+3026373 MS.gene012395:CDS
AGGAAAATGGTCAAAAGAAG+AGG 0.551314 8.3:+3026157 MS.gene012395:CDS
CATCAATGGATACTAACAAA+GGG 0.551570 8.3:+3026126 MS.gene012395:CDS
TATCGAGTCTCCATAGGTGG+TGG 0.555040 8.3:-3027410 None:intergenic
ATCAACCAAATTTATCTCAG+AGG 0.568116 8.3:-3027534 None:intergenic
AGTTCCATCTTGTCAGGGAA+GGG 0.568728 8.3:-3026942 None:intergenic
AACGATGTTGCAGCAAGCCA+TGG 0.571591 8.3:+3027587 MS.gene012395:CDS
GGTTAGACAATAACGATGCT+AGG 0.577069 8.3:+3027633 MS.gene012395:CDS
AAAAGAAAACTTAAAAGGCG+TGG 0.582597 8.3:+3026912 MS.gene012395:CDS
AACATGCTCTACAATAATGT+GGG 0.582958 8.3:+3027119 MS.gene012395:CDS
GACAATGTTGAAGCAAACCT+TGG 0.585388 8.3:+3027719 MS.gene012395:CDS
AGATCTGATACCATAGCCAT+AGG 0.586469 8.3:-3027314 None:intergenic
CATTCAGTTCCATCTTGTCA+GGG 0.589321 8.3:-3026947 None:intergenic
TTGGTGACTTCATGGATCCG+TGG 0.591282 8.3:+3027738 MS.gene012395:CDS
ATGGTCTAAGCTGGCTCACG+AGG 0.595641 8.3:+3026382 MS.gene012395:CDS
TCATCAATGGATACTAACAA+AGG 0.597651 8.3:+3026125 MS.gene012395:CDS
TATGAACATTCTGAGGGTGG+AGG 0.607733 8.3:-3027338 None:intergenic
ATCTTATATCGAGTCTCCAT+AGG 0.609623 8.3:-3027416 None:intergenic
TATAGACAAGAGAATTGGGA+AGG 0.611752 8.3:+3027488 MS.gene012395:CDS
CTGAAGTCAATCAAAAGCCA+CGG 0.625068 8.3:-3027755 None:intergenic
GGAAGGTATGAACATTCTGA+GGG 0.632273 8.3:-3027344 None:intergenic
AGGTATGAACATTCTGAGGG+TGG 0.639412 8.3:-3027341 None:intergenic
CTTCAACCAGATGTGAAGAA+GGG 0.643415 8.3:+3026296 MS.gene012395:CDS
GAACGAGGTATCAAGAAATG+CGG 0.646070 8.3:+3026226 MS.gene012395:CDS
TTATATCGAGTCTCCATAGG+TGG 0.647338 8.3:-3027413 None:intergenic
TACGTGAAGGAAGTAGTGGA+AGG 0.655267 8.3:-3027361 None:intergenic
ATCATACGTGAAGGAAGTAG+TGG 0.655466 8.3:-3027365 None:intergenic
TCACCAAGCATCATACGTGA+AGG 0.660770 8.3:-3027374 None:intergenic
CCAGATCCATAAAGTCACCA+TGG 0.674040 8.3:-3027604 None:intergenic
AATGCGGGGCTTATACGTTG+CGG 0.702899 8.3:+3026242 MS.gene012395:CDS
ACGAGGTATCAAGAAATGCG+GGG 0.708909 8.3:+3026228 MS.gene012395:CDS
ACGGATCCATGAAGTCACCA+AGG 0.720046 8.3:-3027736 None:intergenic
TGGAACCAGAAATTGGAACG+AGG 0.777296 8.3:+3026211 MS.gene012395:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTTAAAATTGTTTATATG+AGG + chr8.3:3027233-3027252 MS.gene012395:intron 15.0%
!!! ATTAATTTGTATTTGTTCTT+GGG + chr8.3:3026577-3026596 MS.gene012395:intron 15.0%
!! AAAATTCTTGATGTCATTAT+CGG - chr8.3:3026880-3026899 None:intergenic 20.0%
!! AATCTAATAAATAACCAACA+AGG - chr8.3:3026632-3026651 None:intergenic 20.0%
!! ATACTACTTCAATGATTTAT+AGG + chr8.3:3027162-3027181 MS.gene012395:CDS 20.0%
!! CAAGAAAAAGAAAACTTAAA+AGG + chr8.3:3026907-3026926 MS.gene012395:CDS 20.0%
!! TATCATCAAAATAATCAACA+AGG - chr8.3:3026552-3026571 None:intergenic 20.0%
!!! AATGATGAGTTGAATAAAAA+TGG + chr8.3:3026966-3026985 MS.gene012395:CDS 20.0%
!!! ATAAATTTGGTTGATGAAAA+AGG + chr8.3:3027542-3027561 MS.gene012395:CDS 20.0%
!!! ATAATGACATCAAGAATTTT+TGG + chr8.3:3026880-3026899 MS.gene012395:CDS 20.0%
!!! CATTAATTTGTATTTGTTCT+TGG + chr8.3:3026576-3026595 MS.gene012395:intron 20.0%
!!! TAAATTTGGTTGATGAAAAA+GGG + chr8.3:3027543-3027562 MS.gene012395:CDS 20.0%
! AGTTACATTCATCAATTTCA+GGG + chr8.3:3027268-3027287 MS.gene012395:intron 25.0%
! ATCTCTACTAAACAACTTAT+AGG - chr8.3:3026739-3026758 None:intergenic 25.0%
! GTTATATAGACAAGAGAATT+GGG + chr8.3:3027484-3027503 MS.gene012395:CDS 25.0%
! TATATACCACAAGTGAAATT+TGG + chr8.3:3027032-3027051 MS.gene012395:CDS 25.0%
! TGTTATATAGACAAGAGAAT+TGG + chr8.3:3027483-3027502 MS.gene012395:CDS 25.0%
! TTTCAGTTCTTTAACATGTT+TGG + chr8.3:3026350-3026369 MS.gene012395:CDS 25.0%
!! TATTTTCCAAATTTCACTTG+TGG - chr8.3:3027041-3027060 None:intergenic 25.0%
!! TGAAATGTTAAAAGCATATG+TGG + chr8.3:3026181-3026200 MS.gene012395:CDS 25.0%
!!! ACAAATTTGGTTGATGAAAA+AGG + chr8.3:3027674-3027693 MS.gene012395:CDS 25.0%
AAAAACATGGAACCAGAAAT+TGG + chr8.3:3026204-3026223 MS.gene012395:CDS 30.0%
AAAAGAAAACTTAAAAGGCG+TGG + chr8.3:3026912-3026931 MS.gene012395:CDS 30.0%
AAACATGCTCTACAATAATG+TGG + chr8.3:3027118-3027137 MS.gene012395:CDS 30.0%
AAAGCATATGTGGAAAAACA+TGG + chr8.3:3026191-3026210 MS.gene012395:CDS 30.0%
AACATGCTCTACAATAATGT+GGG + chr8.3:3027119-3027138 MS.gene012395:CDS 30.0%
AAGGGTTGAAAAAAGGAAAA+TGG + chr8.3:3026144-3026163 MS.gene012395:CDS 30.0%
AATGTGTGATCTAACGAATA+TGG - chr8.3:3026480-3026499 None:intergenic 30.0%
ACATTATTGTAGAGCATGTT+TGG - chr8.3:3027119-3027138 None:intergenic 30.0%
ACTAACAAAGGGTTGAAAAA+AGG + chr8.3:3026137-3026156 MS.gene012395:CDS 30.0%
ATCAACCAAATTTATCTCAG+AGG - chr8.3:3027537-3027556 None:intergenic 30.0%
CAGTTACATTCATCAATTTC+AGG + chr8.3:3027267-3027286 MS.gene012395:intron 30.0%
CATCAATGGATACTAACAAA+GGG + chr8.3:3026126-3026145 MS.gene012395:CDS 30.0%
CATTATTGTAGAGCATGTTT+GGG - chr8.3:3027118-3027137 None:intergenic 30.0%
GAATTGTATATGAAAGACAG+TGG - chr8.3:3027206-3027225 None:intergenic 30.0%
GTTAAAGAACTGAAAGACTT+TGG - chr8.3:3026345-3026364 None:intergenic 30.0%
GTTACATTCATCAATTTCAG+GGG + chr8.3:3027269-3027288 MS.gene012395:intron 30.0%
TACTAAACAACTTATAGGCA+TGG - chr8.3:3026734-3026753 None:intergenic 30.0%
TCATCAATGGATACTAACAA+AGG + chr8.3:3026125-3026144 MS.gene012395:CDS 30.0%
TGATAAGTTGCATGTGAATA+AGG + chr8.3:3026759-3026778 MS.gene012395:intron 30.0%
TTCAAATAGCCAACAAGTTA+AGG + chr8.3:3026989-3027008 MS.gene012395:CDS 30.0%
! ACATGTTTGGTGAATTCAAA+TGG + chr8.3:3026363-3026382 MS.gene012395:CDS 30.0%
!!! GTTTTTTCTTCTTCGCTAAA+AGG - chr8.3:3026323-3026342 None:intergenic 30.0%
AAAGAAGCCAATTTCTTTGG+AGG + chr8.3:3027697-3027716 MS.gene012395:CDS 35.0%
ACATTGTCCTCCAAAGAAAT+TGG - chr8.3:3027707-3027726 None:intergenic 35.0%
ACTTTATGGATCTGGATCTT+CGG + chr8.3:3027612-3027631 MS.gene012395:CDS 35.0%
AGGAAAATGGTCAAAAGAAG+AGG + chr8.3:3026157-3026176 MS.gene012395:CDS 35.0%
AGGAAAGAAGCCAATTTCTT+TGG + chr8.3:3027694-3027713 MS.gene012395:CDS 35.0%
ATCTTATATCGAGTCTCCAT+AGG - chr8.3:3027419-3027438 None:intergenic 35.0%
ATGGTAATTGATAAACTCCG+TGG - chr8.3:3026715-3026734 None:intergenic 35.0%
GTAAAAGTTGTCGTCTAAGA+TGG + chr8.3:3026264-3026283 MS.gene012395:CDS 35.0%
TATAGACAAGAGAATTGGGA+AGG + chr8.3:3027488-3027507 MS.gene012395:CDS 35.0%
TCAACAAGGTATAACACAAG+TGG - chr8.3:3026538-3026557 None:intergenic 35.0%
TGAATTCAAATGGTCTAAGC+TGG + chr8.3:3026373-3026392 MS.gene012395:CDS 35.0%
TGGAACTTCTTGTATACCTA+TGG + chr8.3:3027298-3027317 MS.gene012395:CDS 35.0%
TTCTTGTATACCTATGGCTA+TGG + chr8.3:3027304-3027323 MS.gene012395:CDS 35.0%
! TTTCTTTTGTGATAGTTGCC+TGG + chr8.3:3026849-3026868 MS.gene012395:intron 35.0%
!! CTTGTGAATCCTTAACTTGT+TGG - chr8.3:3027001-3027020 None:intergenic 35.0%
!! GCATTCCTCTGAGATAAATT+TGG + chr8.3:3027529-3027548 MS.gene012395:CDS 35.0%
!! TGCGTATAAAAGTGTCTCAT+TGG + chr8.3:3027454-3027473 MS.gene012395:CDS 35.0%
AATAAGGTTGAGAGAGCTTC+TGG + chr8.3:3026775-3026794 MS.gene012395:intron 40.0%
AGATCTGATACCATAGCCAT+AGG - chr8.3:3027317-3027336 None:intergenic 40.0%
AGGGAAGAAGTCAATTGCTT+TGG + chr8.3:3027562-3027581 MS.gene012395:CDS 40.0%
ATCAATTTCAGGGGTAGCAT+TGG + chr8.3:3027278-3027297 MS.gene012395:intron 40.0%
ATCATACGTGAAGGAAGTAG+TGG - chr8.3:3027368-3027387 None:intergenic 40.0%
ATGTCATTATCGGATCTTCC+AGG - chr8.3:3026870-3026889 None:intergenic 40.0%
CATTCAGTTCCATCTTGTCA+GGG - chr8.3:3026950-3026969 None:intergenic 40.0%
CTGAAGTCAATCAAAAGCCA+CGG - chr8.3:3027758-3027777 None:intergenic 40.0%
CTTCAACCAGATGTGAAGAA+GGG + chr8.3:3026296-3026315 MS.gene012395:CDS 40.0%
GACAATGTTGAAGCAAACCT+TGG + chr8.3:3027719-3027738 MS.gene012395:CDS 40.0%
GAGACTCGATATAAGATGTC+AGG + chr8.3:3027422-3027441 MS.gene012395:CDS 40.0%
GGTTAGACAATAACGATGCT+AGG + chr8.3:3027633-3027652 MS.gene012395:CDS 40.0%
TCATTCAGTTCCATCTTGTC+AGG - chr8.3:3026951-3026970 None:intergenic 40.0%
TGATACCTCGTTCCAATTTC+TGG - chr8.3:3026219-3026238 None:intergenic 40.0%
TTATATCGAGTCTCCATAGG+TGG - chr8.3:3027416-3027435 None:intergenic 40.0%
! AACGAGGTATCAAGAAATGC+GGG + chr8.3:3026227-3026246 MS.gene012395:CDS 40.0%
! GAACGAGGTATCAAGAAATG+CGG + chr8.3:3026226-3026245 MS.gene012395:CDS 40.0%
! GCATTCGTCTGAGACAAATT+TGG + chr8.3:3027661-3027680 MS.gene012395:CDS 40.0%
! GGAAGGTATGAACATTCTGA+GGG - chr8.3:3027347-3027366 None:intergenic 40.0%
! GTGCTATGAATTTGAAGCCA+CGG + chr8.3:3026695-3026714 MS.gene012395:intron 40.0%
! TGGAAGGTATGAACATTCTG+AGG - chr8.3:3027348-3027367 None:intergenic 40.0%
AAAGGACCCTTCTTCACATC+TGG - chr8.3:3026305-3026324 None:intergenic 45.0%
AGCAAGCCATGGTGACTTTA+TGG + chr8.3:3027598-3027617 MS.gene012395:CDS 45.0%
AGTTCCATCTTGTCAGGGAA+GGG - chr8.3:3026945-3026964 None:intergenic 45.0%
CCAACAAGGTATAACAGACG+TGG - chr8.3:3026618-3026637 None:intergenic 45.0%
CCACGTCTGTTATACCTTGT+TGG + chr8.3:3026615-3026634 MS.gene012395:intron 45.0%
CCAGATCCATAAAGTCACCA+TGG - chr8.3:3027607-3027626 None:intergenic 45.0%
CCATGGTGACTTTATGGATC+TGG + chr8.3:3027604-3027623 MS.gene012395:CDS 45.0%
CCTTCAACCAGATGTGAAGA+AGG + chr8.3:3026295-3026314 MS.gene012395:CDS 45.0%
CCTTCTTCACATCTGGTTGA+AGG - chr8.3:3026298-3026317 None:intergenic 45.0%
CTTCCTTCACGTATGATGCT+TGG + chr8.3:3027371-3027390 MS.gene012395:CDS 45.0%
TCACCAAGCATCATACGTGA+AGG - chr8.3:3027377-3027396 None:intergenic 45.0%
TCCTCAAATTCCACCACCTA+TGG + chr8.3:3027400-3027419 MS.gene012395:CDS 45.0%
TGGAACCAGAAATTGGAACG+AGG + chr8.3:3026211-3026230 MS.gene012395:CDS 45.0%
! ACGAGGTATCAAGAAATGCG+GGG + chr8.3:3026228-3026247 MS.gene012395:CDS 45.0%
! AGCAAACCTTGGTGACTTCA+TGG + chr8.3:3027730-3027749 MS.gene012395:CDS 45.0%
! AGGTATGAACATTCTGAGGG+TGG - chr8.3:3027344-3027363 None:intergenic 45.0%
! TACGTGAAGGAAGTAGTGGA+AGG - chr8.3:3027364-3027383 None:intergenic 45.0%
! TATGAACATTCTGAGGGTGG+AGG - chr8.3:3027341-3027360 None:intergenic 45.0%
!! TCCATAGGTGGTGGAATTTG+AGG - chr8.3:3027404-3027423 None:intergenic 45.0%
AACGATGTTGCAGCAAGCCA+TGG + chr8.3:3027587-3027606 MS.gene012395:CDS 50.0%
AATGCGGGGCTTATACGTTG+CGG + chr8.3:3026242-3026261 MS.gene012395:CDS 50.0%
ACGGATCCATGAAGTCACCA+AGG - chr8.3:3027739-3027758 None:intergenic 50.0%
CAGTTCCATCTTGTCAGGGA+AGG - chr8.3:3026946-3026965 None:intergenic 50.0%
TATCGAGTCTCCATAGGTGG+TGG - chr8.3:3027413-3027432 None:intergenic 50.0%
! TTGGTGACTTCATGGATCCG+TGG + chr8.3:3027738-3027757 MS.gene012395:CDS 50.0%
GTCACCCTTCCCTGACAAGA+TGG + chr8.3:3026938-3026957 MS.gene012395:CDS 55.0%
! ATGGTCTAAGCTGGCTCACG+AGG + chr8.3:3026382-3026401 MS.gene012395:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 3026119 3027781 3026119 ID=MS.gene012395
chr8.3 mRNA 3026119 3027781 3026119 ID=MS.gene012395.t1;Parent=MS.gene012395
chr8.3 exon 3026119 3026403 3026119 ID=MS.gene012395.t1.exon1;Parent=MS.gene012395.t1
chr8.3 CDS 3026119 3026403 3026119 ID=cds.MS.gene012395.t1;Parent=MS.gene012395.t1
chr8.3 exon 3026864 3027183 3026864 ID=MS.gene012395.t1.exon2;Parent=MS.gene012395.t1
chr8.3 CDS 3026864 3027183 3026864 ID=cds.MS.gene012395.t1;Parent=MS.gene012395.t1
chr8.3 exon 3027289 3027781 3027289 ID=MS.gene012395.t1.exon3;Parent=MS.gene012395.t1
chr8.3 CDS 3027289 3027781 3027289 ID=cds.MS.gene012395.t1;Parent=MS.gene012395.t1
Gene Sequence

>MS.gene012395

ATGTCTTCATCAATGGATACTAACAAAGGGTTGAAAAAAGGAAAATGGTCAAAAGAAGAGGATGAAATGTTAAAAGCATATGTGGAAAAACATGGAACCAGAAATTGGAACGAGGTATCAAGAAATGCGGGGCTTATACGTTGCGGTAAAAGTTGTCGTCTAAGATGGTATAATCACCTTCAACCAGATGTGAAGAAGGGTCCTTTTAGCGAAGAAGAAAAAACCAAAGTCTTTCAGTTCTTTAACATGTTTGGTGAATTCAAATGGTCTAAGCTGGCTCACGAGGTTTTATCTTCATGCTTTACTTCTTTTCTTTTTGTTTTATTTGAAATATTTATCTATTCTTCTGCAATTGCAACCATATTCGTTAGATCACACATTGTGCAATTTAATTAAATACTATACTATGATTTTTACCACTTGTGTTATACCTTGTTGATTATTTTGATGATAATGTCATTAATTTGTATTTGTTCTTGGGAGACTCACATATTTACCACGTCTGTTATACCTTGTTGGTTATTTATTAGATTAGTTTCTACTTTTTATTGAAACTGATTTATTAGTTAGCAATTTGTGCTATGAATTTGAAGCCACGGAGTTTATCAATTACCATGCCTATAAGTTGTTTAGTAGAGATTGATAAGTTGCATGTGAATAAGGTTGAGAGAGCTTCTGGAAAATCTAGCTTTACATGTTCTTGTATTTTCTTGATCGTTAATTTGTATTCTTTCTTTTGTGATAGTTGCCTGGAAGATCCGATAATGACATCAAGAATTTTTGGAATGCAAGAAAAAGAAAACTTAAAAGGCGTGGCTTGTCACCCTTCCCTGACAAGATGGAACTGAATGATGAGTTGAATAAAAATGGTTCAAATAGCCAACAAGTTAAGGATTCACAAGATGATGAATTTTATATACCACAAGTGAAATTTGGAAAATATTCATCAATTTATGATAAGATAAGTGAAAACAACTTTGAAAAACTTTTAGATGTCCCAAACATGCTCTACAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAATGATTTATAGGTGAGTAGATTATGTAATGCCACTGTCTTTCATATACAATTCAAATTATATGTTAAAATTGTTTATATGAGGTGTTAAATTTACAGTTACATTCATCAATTTCAGGGGTAGCATTGGAACTTCTTGTATACCTATGGCTATGGTATCAGATCTGCCTCCACCCTCAGAATGTTCATACCTTCCACTACTTCCTTCACGTATGATGCTTGGTGAGTATCCTCAAATTCCACCACCTATGGAGACTCGATATAAGATGTCAGGATCAAGTTCTGCGTATAAAAGTGTCTCATTGGAGTCTATGTTATATAGACAAGAGAATTGGGAAGGCTTCGATGCTAGTCACGTGCATTCCTCTGAGATAAATTTGGTTGATGAAAAAGGGAAGAAGTCAATTGCTTTGGAGAACGATGTTGCAGCAAGCCATGGTGACTTTATGGATCTGGATCTTCGGTTAGACAATAACGATGCTAGGCATGTGCATTCGTCTGAGACAAATTTGGTTGATGAAAAAGGAAAGAAGCCAATTTCTTTGGAGGACAATGTTGAAGCAAACCTTGGTGACTTCATGGATCCGTGGCTTTTGATTGACTTCAGTTGA
Protein sequence

>MS.gene012395.t1

MSSSMDTNKGLKKGKWSKEEDEMLKAYVEKHGTRNWNEVSRNAGLIRCGKSCRLRWYNHLQPDVKKGPFSEEEKTKVFQFFNMFGEFKWSKLAHELPGRSDNDIKNFWNARKRKLKRRGLSPFPDKMELNDELNKNGSNSQQVKDSQDDEFYIPQVKFGKYSSIYDKISENNFEKLLDVPNMLYNNVGSTSTSNHTTSMIYRGSIGTSCIPMAMVSDLPPPSECSYLPLLPSRMMLGEYPQIPPPMETRYKMSGSSSAYKSVSLESMLYRQENWEGFDASHVHSSEINLVDEKGKKSIALENDVAASHGDFMDLDLRLDNNDARHVHSSETNLVDEKGKKPISLEDNVEANLGDFMDPWLLIDFS