AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012558

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012558.t1 MTR_4g130900 93.373 498 32 1 1 498 1 497 0.0 905
MS.gene012558.t1 MTR_3g056100 37.576 330 167 11 115 425 12 321 1.66e-51 182
MS.gene012558.t1 MTR_3g056100 43.388 242 117 7 186 425 242 465 1.02e-50 182
MS.gene012558.t1 MTR_7g011820 40.136 294 133 8 185 455 226 499 1.41e-50 181
MS.gene012558.t1 MTR_3g056100 36.842 342 166 12 115 425 12 334 9.26e-50 177
MS.gene012558.t1 MTR_5g094430 37.175 269 155 5 156 422 36 292 2.70e-49 175
MS.gene012558.t1 MTR_5g094430 53.731 67 30 1 359 425 65 130 6.76e-15 77.0
MS.gene012558.t1 MTR_3g056100 36.842 342 166 12 115 425 156 478 4.55e-49 178
MS.gene012558.t1 MTR_5g094430 37.175 269 155 5 156 422 58 314 5.54e-49 175
MS.gene012558.t1 MTR_5g094430 53.731 67 30 1 359 425 87 152 6.78e-15 77.4
MS.gene012558.t1 MTR_5g094430 37.175 269 155 5 156 422 170 426 7.33e-49 177
MS.gene012558.t1 MTR_5g094430 53.731 67 30 1 359 425 199 264 4.61e-15 78.2
MS.gene012558.t1 MTR_5g042920 40.000 250 137 7 177 422 142 382 2.72e-48 173
MS.gene012558.t1 MTR_5g042920 54.688 64 28 1 361 424 152 214 1.10e-15 79.7
MS.gene012558.t1 MTR_4g082580 37.261 314 140 11 111 422 82 340 1.03e-46 167
MS.gene012558.t1 MTR_4g082580 44.444 90 44 2 335 423 124 208 9.72e-13 70.1
MS.gene012558.t1 MTR_7g080020 38.652 282 123 7 186 422 279 555 1.00e-44 168
MS.gene012558.t1 MTR_7g080020 44.898 98 52 2 343 440 264 359 6.18e-16 81.3
MS.gene012558.t1 MTR_3g031220 39.526 253 129 5 179 422 190 427 3.27e-44 163
MS.gene012558.t1 MTR_3g031220 52.239 67 31 1 359 425 197 262 9.57e-16 80.1
MS.gene012558.t1 MTR_3g009470 35.986 289 137 7 179 422 272 557 3.42e-44 166
MS.gene012558.t1 MTR_3g009470 49.333 75 33 2 356 426 272 345 6.25e-16 81.3
MS.gene012558.t1 MTR_5g074400 39.286 252 127 6 186 422 242 482 1.41e-43 163
MS.gene012558.t1 MTR_7g100510 35.341 249 156 3 174 420 176 421 4.67e-43 159
MS.gene012558.t1 MTR_7g100510 47.368 76 39 1 359 434 188 262 3.12e-17 84.3
MS.gene012558.t1 MTR_7g080000 37.594 266 129 7 188 422 235 494 2.35e-42 161
MS.gene012558.t1 MTR_7g071120 38.710 248 123 7 186 426 165 390 4.64e-42 157
MS.gene012558.t1 MTR_4g013260 34.137 249 141 4 175 422 172 398 5.82e-38 145
MS.gene012558.t1 MTR_5g097490 36.596 235 132 5 188 420 93 312 2.67e-37 142
MS.gene012558.t1 MTR_3g009470 33.198 247 117 7 179 380 272 515 2.12e-26 112
MS.gene012558.t1 MTR_3g009470 49.333 75 33 2 356 426 272 345 3.19e-16 81.6
MS.gene012558.t1 MTR_3g031220 36.019 211 111 5 179 380 190 385 7.39e-25 106
MS.gene012558.t1 MTR_3g031220 52.239 67 31 1 359 425 197 262 3.38e-16 80.9
MS.gene012558.t1 MTR_5g097500 30.833 240 124 7 188 419 84 289 1.31e-23 101
MS.gene012558.t1 MTR_1g015140 51.316 76 37 0 341 416 83 158 1.14e-21 92.0
MS.gene012558.t1 MTR_2g033820 41.818 110 55 2 343 447 186 291 2.88e-21 95.9
MS.gene012558.t1 MTR_1g077780 39.655 116 62 2 305 419 13 121 7.91e-21 89.4
MS.gene012558.t1 MTR_4g094412 50.000 80 39 1 342 420 216 295 2.05e-20 94.4
MS.gene012558.t1 MTR_4g094412 50.000 80 39 1 342 420 225 304 2.13e-20 94.4
MS.gene012558.t1 MTR_3g104750 52.857 70 33 0 347 416 91 160 3.11e-20 88.2
MS.gene012558.t1 MTR_1g086790 41.489 94 55 0 326 419 124 217 4.89e-20 91.7
MS.gene012558.t1 MTR_4g094588 44.231 104 49 2 346 449 164 258 6.69e-20 91.3
MS.gene012558.t1 MTR_4g107970 50.000 80 39 1 342 420 160 239 6.94e-20 93.2
MS.gene012558.t1 MTR_8g007270 47.945 73 38 0 344 416 138 210 9.02e-20 88.6
MS.gene012558.t1 MTR_4g107970 50.000 80 39 1 342 420 237 316 1.28e-19 92.8
MS.gene012558.t1 MTR_7g109800 38.679 106 65 0 315 420 100 205 1.53e-19 89.7
MS.gene012558.t1 MTR_8g092010 46.250 80 43 0 341 420 89 168 2.13e-19 86.3
MS.gene012558.t1 MTR_7g110720 49.367 79 39 1 342 419 171 249 2.76e-19 90.5
MS.gene012558.t1 MTR_3g095080 47.945 73 38 0 344 416 152 224 2.99e-19 87.4
MS.gene012558.t1 MTR_4g094908 57.895 57 23 1 361 416 267 323 3.37e-19 89.4
MS.gene012558.t1 MTR_4g132430 49.351 77 38 1 344 419 111 187 3.46e-19 89.7
MS.gene012558.t1 MTR_3g095080 47.945 73 38 0 344 416 128 200 3.53e-19 86.7
MS.gene012558.t1 MTR_7g110720 49.367 79 39 1 342 419 198 276 3.70e-19 90.5
MS.gene012558.t1 MTR_3g053330 39.623 106 55 2 344 448 235 332 7.85e-19 89.7
MS.gene012558.t1 MTR_2g045360 30.481 187 117 4 300 482 148 325 8.56e-19 89.4
MS.gene012558.t1 MTR_2g023930 48.052 77 39 1 344 419 289 365 1.15e-18 89.4
MS.gene012558.t1 MTR_4g132430 49.367 79 37 2 344 421 245 321 1.42e-18 89.0
MS.gene012558.t1 MTR_7g009730 48.750 80 40 1 338 416 197 276 1.85e-18 89.0
MS.gene012558.t1 MTR_7g028415 48.000 75 37 1 348 422 81 153 2.56e-18 82.8
MS.gene012558.t1 MTR_7g028710 48.000 75 37 1 348 422 81 153 2.56e-18 82.8
MS.gene012558.t1 MTR_7g062220 47.368 76 39 1 341 416 106 180 3.49e-18 85.9
MS.gene012558.t1 MTR_8g096730 46.154 78 40 1 345 422 55 130 3.79e-18 81.6
MS.gene012558.t1 MTR_5g016610 57.895 57 23 1 361 416 200 256 3.97e-18 84.7
MS.gene012558.t1 MTR_3g095040 33.077 130 84 2 292 420 51 178 3.97e-18 83.2
MS.gene012558.t1 MTR_2g088000 49.351 77 38 1 344 419 333 409 4.02e-18 87.8
MS.gene012558.t1 MTR_5g043880 43.158 95 46 1 324 418 96 182 5.78e-18 84.7
MS.gene012558.t1 MTR_7g079010 44.737 76 42 0 341 416 122 197 6.01e-18 83.2
MS.gene012558.t1 MTR_8g092140 47.297 74 38 1 344 416 143 216 6.85e-18 83.6
MS.gene012558.t1 MTR_5g091390 46.667 75 40 0 346 420 143 217 8.98e-18 84.7
MS.gene012558.t1 MTR_1g099600 43.373 83 45 2 341 422 167 248 3.81e-17 82.8
MS.gene012558.t1 MTR_1g009613 56.140 57 24 1 361 416 263 319 5.36e-17 82.8
MS.gene012558.t1 MTR_1g070455 56.140 57 24 1 361 416 294 350 7.93e-17 82.4
MS.gene012558.t1 MTR_4g122530 54.545 66 30 0 355 420 203 268 1.07e-16 82.8
MS.gene012558.t1 MTR_4g049790 33.103 145 81 5 345 473 297 441 1.37e-16 83.2
MS.gene012558.t1 MTR_4g127040 53.333 60 27 1 358 416 243 302 1.81e-16 80.9
MS.gene012558.t1 MTR_4g007060 37.391 115 57 4 348 458 115 218 3.81e-16 79.3
MS.gene012558.t1 MTR_3g106060 40.506 79 45 2 340 416 117 195 4.30e-16 79.3
MS.gene012558.t1 MTR_4g007060 37.391 115 57 4 348 458 149 252 5.80e-16 79.3
MS.gene012558.t1 MTR_2g083870 48.485 66 33 1 361 425 81 146 8.75e-16 77.8
MS.gene012558.t1 MTR_6g086555 50.769 65 31 1 361 424 207 271 2.07e-15 78.6
MS.gene012558.t1 MTR_4g049760 40.000 95 56 1 330 423 260 354 2.48e-15 79.0
MS.gene012558.t1 MTR_7g109600 46.154 65 34 1 357 420 50 114 3.18e-15 76.3
MS.gene012558.t1 MTR_8g087000 52.381 63 29 1 361 422 78 140 3.60e-15 75.9
MS.gene012558.t1 MTR_8g087000 52.381 63 29 1 361 422 77 139 3.97e-15 75.5
MS.gene012558.t1 MTR_3g108960 52.459 61 28 1 358 417 312 372 6.01e-15 77.0
MS.gene012558.t1 MTR_1g013760 49.123 57 28 1 361 416 141 197 1.06e-14 75.1
MS.gene012558.t1 MTR_2g105060 42.466 73 41 1 348 419 82 154 1.11e-14 74.3
MS.gene012558.t1 MTR_2g105060 47.619 63 32 1 358 419 167 229 1.63e-14 75.1
MS.gene012558.t1 MTR_0117s0040 51.613 62 29 1 358 418 72 133 1.73e-14 73.6
MS.gene012558.t1 MTR_2g024350 46.875 64 33 1 361 423 9 72 4.06e-14 72.4
MS.gene012558.t1 MTR_8g028565 40.000 95 50 3 335 424 126 218 7.22e-14 73.2
MS.gene012558.t1 MTR_1g013790 44.444 63 34 1 358 419 99 161 7.60e-14 72.0
MS.gene012558.t1 MTR_2g016770 46.032 63 33 1 361 422 36 98 8.41e-14 71.2
MS.gene012558.t1 MTR_2g016770 46.032 63 33 1 361 422 28 90 1.20e-13 70.5
MS.gene012558.t1 MTR_1g078260 42.308 78 44 1 347 423 234 311 2.07e-13 72.8
MS.gene012558.t1 MTR_7g079040 46.970 66 34 1 358 422 152 217 2.11e-13 71.6
MS.gene012558.t1 MTR_2g032030 46.269 67 33 2 361 426 268 332 3.93e-13 71.6
MS.gene012558.t1 MTR_8g069935 36.842 95 46 3 326 419 310 391 3.96e-13 72.0
MS.gene012558.t1 MTR_2g032030 46.269 67 33 2 361 426 268 332 4.01e-13 72.0
MS.gene012558.t1 MTR_8g067635 44.444 72 39 1 349 419 338 409 4.62e-13 72.0
MS.gene012558.t1 MTR_8g067650 47.619 63 32 1 358 419 337 399 5.33e-13 71.6
MS.gene012558.t1 MTR_2g024380 46.875 64 33 1 361 423 252 315 6.29e-13 71.2
MS.gene012558.t1 MTR_8g098945 38.000 100 49 4 357 453 126 215 7.31e-13 69.3
MS.gene012558.t1 MTR_5g067680 47.368 57 27 1 361 414 203 259 1.54e-11 66.2
MS.gene012558.t1 MTR_6g053200 37.879 66 40 1 358 422 328 393 1.96e-11 66.6
MS.gene012558.t1 MTR_5g044695 55.556 45 20 0 344 388 61 105 5.44e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012558.t1 AT4G30935 48.692 497 199 16 28 518 20 466 5.73e-125 374
MS.gene012558.t1 AT2G03340 34.000 350 192 10 92 422 148 477 2.61e-50 180
MS.gene012558.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene012558.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene012558.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene012558.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene012558.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene012558.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene012558.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene012558.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene012558.t1 AT1G13960 38.683 243 140 4 185 419 74 315 8.77e-48 169
MS.gene012558.t1 AT4G26640 36.149 296 154 6 141 422 97 371 9.71e-48 172
MS.gene012558.t1 AT4G26640 52.239 67 31 1 358 424 137 202 1.03e-14 77.0
MS.gene012558.t1 AT4G26640 36.149 296 154 6 141 422 129 403 1.20e-47 173
MS.gene012558.t1 AT4G26640 52.239 67 31 1 358 424 169 234 9.49e-15 77.4
MS.gene012558.t1 AT4G26640 36.149 296 154 6 141 422 169 443 1.77e-47 173
MS.gene012558.t1 AT4G26640 52.239 67 31 1 358 424 209 274 9.43e-15 77.4
MS.gene012558.t1 AT1G13960 34.132 334 200 9 94 419 147 468 2.48e-47 172
MS.gene012558.t1 AT2G38470 38.583 254 123 5 188 422 185 424 3.78e-45 166
MS.gene012558.t1 AT4G26440 38.202 267 128 8 185 422 176 434 5.25e-45 167
MS.gene012558.t1 AT4G26440 45.714 70 37 1 361 430 179 247 3.02e-13 72.8
MS.gene012558.t1 AT5G07100 41.152 243 83 9 186 427 116 299 1.47e-43 157
MS.gene012558.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene012558.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene012558.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene012558.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene012558.t1 AT2G04880 35.650 331 165 11 122 419 27 342 4.54e-43 159
MS.gene012558.t1 AT2G04880 33.815 346 175 11 122 419 27 366 3.71e-40 152
MS.gene012558.t1 AT2G04880 50.000 60 29 1 361 420 112 170 2.66e-12 69.3
MS.gene012558.t1 AT3G01080 35.443 237 115 5 185 419 165 365 3.26e-36 139
MS.gene012558.t1 AT3G01080 46.753 77 40 1 361 437 168 243 1.09e-14 76.6
MS.gene012558.t1 AT3G01080 35.443 237 115 5 185 419 203 403 3.53e-36 140
MS.gene012558.t1 AT3G01080 46.753 77 40 1 361 437 206 281 9.21e-15 77.0
MS.gene012558.t1 AT2G30250 35.124 242 140 4 186 424 165 392 1.51e-35 137
MS.gene012558.t1 AT2G30250 49.315 73 36 1 359 431 165 236 3.40e-12 68.6
MS.gene012558.t1 AT2G37260 37.743 257 119 9 186 416 84 325 9.24e-34 131
MS.gene012558.t1 AT2G37260 37.743 257 119 9 186 416 82 323 1.14e-33 130
MS.gene012558.t1 AT2G37260 37.743 257 119 9 186 416 164 405 1.68e-33 132
MS.gene012558.t1 AT5G56270 51.020 98 48 0 325 422 452 549 1.31e-26 114
MS.gene012558.t1 AT5G56270 51.515 66 31 1 361 426 274 338 3.47e-15 79.0
MS.gene012558.t1 AT5G56270 32.800 125 81 2 131 253 217 340 1.95e-12 70.5
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 6.91e-24 107
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.70e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 6.91e-24 107
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.76e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 7.05e-24 107
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.17e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 7.31e-24 106
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.07e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 8.70e-24 106
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.71e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 8.70e-24 106
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.71e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.01e-24 106
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.86e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.14e-24 106
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.11e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.14e-24 106
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.11e-12 69.3
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 401 594 9.98e-24 106
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 402 459 6.63e-12 68.9
MS.gene012558.t1 AT4G12020 34.328 201 118 5 187 380 468 661 1.89e-23 105
MS.gene012558.t1 AT4G12020 49.153 59 29 1 361 419 469 526 8.52e-12 68.6
MS.gene012558.t1 AT1G55600 45.679 81 44 0 339 419 286 366 1.59e-20 95.1
MS.gene012558.t1 AT5G49520 42.105 95 54 1 344 437 205 299 2.36e-20 93.6
MS.gene012558.t1 AT5G41570 47.368 76 40 0 341 416 79 154 2.77e-20 89.0
MS.gene012558.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene012558.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene012558.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene012558.t1 AT5G26170 54.839 62 28 0 355 416 108 169 1.14e-19 87.0
MS.gene012558.t1 AT2G23320 61.404 57 21 1 361 416 241 297 1.33e-19 90.1
MS.gene012558.t1 AT2G44745 43.023 86 49 0 331 416 116 201 1.69e-19 87.8
MS.gene012558.t1 AT5G13080 47.368 76 38 1 347 422 54 127 1.83e-19 85.5
MS.gene012558.t1 AT4G04450 43.689 103 49 3 344 445 182 276 2.59e-19 90.9
MS.gene012558.t1 AT5G15130 39.823 113 63 2 344 455 169 277 3.36e-19 90.9
MS.gene012558.t1 AT1G68150 47.619 84 43 1 338 420 213 296 3.66e-19 89.7
MS.gene012558.t1 AT5G15130 39.823 113 63 2 344 455 211 319 4.10e-19 90.9
MS.gene012558.t1 AT1G64000 48.571 70 36 0 347 416 101 170 4.69e-19 85.9
MS.gene012558.t1 AT2G24570 50.000 78 38 1 361 437 244 321 4.88e-19 88.6
MS.gene012558.t1 AT4G04450 43.689 103 49 3 344 445 276 370 6.40e-19 90.1
MS.gene012558.t1 AT4G18170 44.828 87 46 1 340 426 152 236 8.54e-19 87.8
MS.gene012558.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene012558.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene012558.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene012558.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene012558.t1 AT3G01970 48.571 70 36 0 347 416 52 121 1.11e-18 83.2
MS.gene012558.t1 AT4G24240 56.667 60 25 1 358 416 279 338 1.53e-18 87.8
MS.gene012558.t1 AT4G39410 49.315 73 37 0 344 416 207 279 1.64e-18 86.7
MS.gene012558.t1 AT4G01720 49.367 79 39 1 342 419 221 299 3.23e-18 87.8
MS.gene012558.t1 AT1G62300 49.367 79 37 2 344 421 296 372 3.66e-18 88.2
MS.gene012558.t1 AT3G04670 57.895 57 23 1 361 416 263 319 4.55e-18 85.9
MS.gene012558.t1 AT4G31550 58.621 58 23 1 361 417 247 304 5.35e-18 85.5
MS.gene012558.t1 AT4G31550 58.621 58 23 1 361 417 246 303 5.38e-18 85.5
MS.gene012558.t1 AT5G28650 57.895 57 23 1 361 416 263 319 9.84e-18 84.7
MS.gene012558.t1 AT5G43290 51.613 62 30 0 357 418 111 172 1.08e-17 83.6
MS.gene012558.t1 AT5G46350 38.739 111 55 4 361 468 184 284 1.16e-17 84.7
MS.gene012558.t1 AT2G47260 52.381 63 30 0 361 423 175 237 1.32e-17 84.7
MS.gene012558.t1 AT1G29860 46.988 83 40 2 361 441 137 217 1.83e-17 83.2
MS.gene012558.t1 AT5G64810 49.206 63 32 0 356 418 106 168 1.85e-17 81.3
MS.gene012558.t1 AT2G46130 46.053 76 41 0 341 416 11 86 2.27e-17 78.2
MS.gene012558.t1 AT3G62340 47.436 78 41 0 343 420 101 178 1.33e-16 80.5
MS.gene012558.t1 AT1G29280 48.529 68 34 1 354 420 68 135 5.34e-16 78.6
MS.gene012558.t1 AT1G18860 46.835 79 39 2 344 421 223 299 9.70e-16 80.5
MS.gene012558.t1 AT2G30590 52.632 57 26 1 361 416 314 370 1.33e-15 79.0
MS.gene012558.t1 AT1G69310 40.816 98 48 2 344 441 131 218 1.95e-15 77.4
MS.gene012558.t1 AT2G21900 49.153 59 30 0 361 419 110 168 3.48e-15 74.7
MS.gene012558.t1 AT3G01080 46.753 77 40 1 361 437 206 281 4.40e-15 77.0
MS.gene012558.t1 AT4G31800 45.000 60 32 1 361 419 112 171 1.52e-14 73.9
MS.gene012558.t1 AT5G52830 50.000 64 31 1 358 420 163 226 1.79e-14 75.1
MS.gene012558.t1 AT4G23550 29.814 161 86 3 263 422 69 203 1.85e-14 74.7
MS.gene012558.t1 AT4G31800 45.000 60 32 1 361 419 177 236 1.97e-14 74.7
MS.gene012558.t1 AT4G01250 45.000 80 40 3 347 425 116 192 4.24e-14 73.6
MS.gene012558.t1 AT2G25000 45.000 60 32 1 361 419 104 163 5.63e-14 72.0
MS.gene012558.t1 AT2G25000 45.000 60 32 1 361 419 104 163 5.63e-14 72.0
MS.gene012558.t1 AT1G80840 38.356 73 44 1 348 419 134 206 6.65e-14 73.2
MS.gene012558.t1 AT1G69810 45.570 79 41 2 344 420 129 207 8.31e-14 73.2
MS.gene012558.t1 AT1G69810 45.570 79 41 2 344 420 187 265 8.70e-14 73.6
MS.gene012558.t1 AT2G25000 45.000 60 32 1 361 419 126 185 1.24e-13 71.2
MS.gene012558.t1 AT2G25000 45.000 60 32 1 361 419 147 206 1.36e-13 71.6
MS.gene012558.t1 AT3G58710 47.761 67 34 1 354 419 65 131 1.57e-13 71.2
MS.gene012558.t1 AT2G34830 43.421 76 39 3 352 426 208 280 1.62e-13 73.2
MS.gene012558.t1 AT3G58710 47.761 67 34 1 354 419 64 130 1.64e-13 71.2
MS.gene012558.t1 AT2G34830 43.421 76 39 3 352 426 217 289 1.71e-13 72.8
MS.gene012558.t1 AT1G30650 43.056 72 39 2 352 422 210 280 9.74e-13 70.5
MS.gene012558.t1 AT2G46130 42.105 76 40 1 341 416 11 82 1.54e-12 64.3
MS.gene012558.t1 AT5G45050 45.588 68 34 2 359 425 1040 1105 3.02e-11 67.0
MS.gene012558.t1 AT5G45050 45.588 68 34 2 359 425 1179 1244 3.10e-11 67.0
MS.gene012558.t1 AT5G45050 45.588 68 34 2 359 425 1151 1216 3.11e-11 66.6

Find 130 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACCGAATTCAGCGTATT+AGG 0.178386 8.4:-3148978 None:intergenic
GGATTCAACTGGCGGAAATA+TGG 0.214937 8.4:+3150350 MS.gene012558:CDS
CCAAAGATGGAAAAGCAATT+AGG 0.223190 8.4:-3148830 None:intergenic
GGTTGTCAAATCCGAAATTA+AGG 0.234424 8.4:+3148995 MS.gene012558:CDS
ACGCGGACTTGCCTTCGTTT+TGG 0.267382 8.4:-3150755 None:intergenic
CAACCGAATTCAGCGTATTA+GGG 0.297461 8.4:-3148977 None:intergenic
CAAAGATGGAAAAGCAATTA+GGG 0.304686 8.4:-3148829 None:intergenic
AAATTATCTAACCTTAATTT+CGG 0.308223 8.4:-3149006 None:intergenic
CCGGGGAAGCCAAGGACCTT+GGG 0.325495 8.4:+3153156 MS.gene012558:CDS
CGGCCTGAGCTGAAGGTTCC+TGG 0.331309 8.4:-3150106 None:intergenic
GGATACCGATGGCGCAAGTA+TGG 0.334207 8.4:+3150985 MS.gene012558:CDS
AGGTGTTTCTTCTTGAGCTT+TGG 0.353643 8.4:-3150642 None:intergenic
CGCAAACTTACTTTCCCTAA+TGG 0.358180 8.4:-3150537 None:intergenic
GCGCAAGTATGGACAGAAAA+TGG 0.361245 8.4:+3150996 MS.gene012558:CDS
ACTCAACTGCAAATTATTCA+TGG 0.361645 8.4:-3153066 None:intergenic
GCAGGAGATGTGGGGATATC+TGG 0.371320 8.4:+3150958 MS.gene012558:CDS
CAGGTTCTCGAAGCTATTAC+AGG 0.382750 8.4:+3150399 MS.gene012558:CDS
ACGGAAGATTAGTTCCATTA+GGG 0.383627 8.4:+3150523 MS.gene012558:CDS
ATTGAATGCTGGGATCATTC+AGG 0.394765 8.4:+3150452 MS.gene012558:CDS
AGACATATTCTGTATTTGTA+TGG 0.407890 8.4:-3150222 None:intergenic
CACGGAAGATTAGTTCCATT+AGG 0.408040 8.4:+3150522 MS.gene012558:CDS
TGCTGCATGTACAACAAACT+TGG 0.409694 8.4:-3150938 None:intergenic
CCATCAGATGATGGTGTCCT+TGG 0.410812 8.4:-3150329 None:intergenic
CCCAAGGTCCTTGGCTTCCC+CGG 0.414124 8.4:-3153156 None:intergenic
GGTGGGCCGTGTCGTTTCTT+CGG 0.415960 8.4:-3152948 None:intergenic
TTCTTGAGCTTTGGAAGATG+TGG 0.417147 8.4:-3150633 None:intergenic
GTCTCAATGTGCTTTCGAAC+AGG 0.417742 8.4:-3152858 None:intergenic
TGGGCACAGCAAATTATTCA+TGG 0.422354 8.4:-3153006 None:intergenic
TGTCTTCTGTTTCTGTTCCA+AGG 0.425869 8.4:+3150312 MS.gene012558:CDS
ACCGGGGAAGCCAAGGACCT+TGG 0.430810 8.4:+3153155 MS.gene012558:CDS
AATCCCTAATACGCTGAATT+CGG 0.433253 8.4:+3148974 MS.gene012558:CDS
CTCTGCAGTCGGTTCGTTGG+AGG 0.433498 8.4:-3150561 None:intergenic
ATCAGAAAATTTCTACTCAA+TGG 0.437791 8.4:+3153108 MS.gene012558:CDS
GGTGCTGCAGCAGCCACAAG+AGG 0.441768 8.4:-3152978 None:intergenic
ATATTCTGTATTTGTATGGT+TGG 0.451171 8.4:-3150218 None:intergenic
TTCCCCGGTTAGTTCTCCTT+CGG 0.452841 8.4:-3153141 None:intergenic
TACTACAGATGCACTTCTGC+TGG 0.452929 8.4:+3152831 MS.gene012558:CDS
GTGGATGGATCAGAATCTTT+CGG 0.455352 8.4:-3150614 None:intergenic
CCGTGTCGTTTCTTCGGCAC+AGG 0.460742 8.4:-3152942 None:intergenic
TGCTAAAAGAGAAGCTGTCC+AGG 0.461739 8.4:+3150088 MS.gene012558:CDS
GATTCAACTGGCGGAAATAT+GGG 0.464037 8.4:+3150351 MS.gene012558:CDS
TCTGTCCATACTTGCGCCAT+CGG 0.468804 8.4:-3150990 None:intergenic
CGTTGATCCAAAACCAAAGA+TGG 0.472386 8.4:-3148843 None:intergenic
AGAAGCTGAGTGGGTCCCAC+AGG 0.472843 8.4:-3148690 None:intergenic
TGCTCTTCGGCCTGAGCTGA+AGG 0.475117 8.4:-3150113 None:intergenic
TAATTTGCAGTTGAGTAAAC+CGG 0.477622 8.4:+3153073 MS.gene012558:CDS
GTTCTCTGCAGTCGGTTCGT+TGG 0.479965 8.4:-3150564 None:intergenic
GAATCTTTCGGAGCATTGAC+AGG 0.481035 8.4:-3150602 None:intergenic
TGTATTTGTATGGTTGGACT+AGG 0.483789 8.4:-3150212 None:intergenic
TCATCTGATATCAATGGTAA+TGG 0.485405 8.4:+3150692 MS.gene012558:CDS
GACACCGAAGGAGAACTAAC+CGG 0.487157 8.4:+3153137 MS.gene012558:CDS
GCTGACGGTGATTCGCCGAC+TGG 0.493066 8.4:-3148750 None:intergenic
TGTCCAGGAACCTTCAGCTC+AGG 0.494745 8.4:+3150103 MS.gene012558:CDS
AAAGACCTTTACCTGGGATG+TGG 0.496114 8.4:-3151030 None:intergenic
TCTGCAGTCGGTTCGTTGGA+GGG 0.497315 8.4:-3150560 None:intergenic
TGCTAAGAAGATTGAATGCT+GGG 0.499049 8.4:+3150442 MS.gene012558:CDS
CATCATCTGATGGATTCAAC+TGG 0.499437 8.4:+3150339 MS.gene012558:CDS
CCCACCAAGTGCTCCTCTTG+TGG 0.499953 8.4:+3153025 MS.gene012558:CDS
TGCTGTCATCATAACTTACA+AGG 0.506337 8.4:+3152899 MS.gene012558:CDS
AAGTTTGTTGTACATGCAGC+AGG 0.506685 8.4:+3150940 MS.gene012558:CDS
GTCTCCGAAGCTCTCCCTGT+GGG 0.511729 8.4:+3148675 MS.gene012558:CDS
CAGAAAGGAGAAAGGTGACT+TGG 0.514032 8.4:+3150879 MS.gene012558:intron
CCCACCAAGTGCTCCTCTTG+TGG 0.523692 8.4:+3152965 MS.gene012558:CDS
ACACCGAAGGAGAACTAACC+GGG 0.523728 8.4:+3153138 MS.gene012558:CDS
GGGTCCCACAGGGAGAGCTT+CGG 0.524421 8.4:-3148679 None:intergenic
CAAAACTCATCTGATATCAA+TGG 0.525848 8.4:+3150686 MS.gene012558:CDS
TGGACCTCTTGAAAATGAAA+AGG 0.527268 8.4:+3150061 MS.gene012558:CDS
TGCAAATTATTCATGGAGGC+AGG 0.533719 8.4:-3153059 None:intergenic
AGCAAATTATTCATGGAGGC+AGG 0.536158 8.4:-3152999 None:intergenic
GCCACAAGAGGAGCACTTGG+TGG 0.539995 8.4:-3152966 None:intergenic
GCTCGAACGCTTCTGAGCAT+AGG 0.544980 8.4:+3153200 MS.gene012558:CDS
TTTGGTGATAGTTCAGATGG+TGG 0.547468 8.4:-3150161 None:intergenic
TTTCATGCTCAGGAAACGGT+TGG 0.552316 8.4:+3150041 MS.gene012558:intron
TTCTGCGACTCGGTGGCTGA+CGG 0.553411 8.4:-3148765 None:intergenic
GAATTTGGTGATAGTTCAGA+TGG 0.554364 8.4:-3150164 None:intergenic
AGAACTAACCGGGGAAGCCA+AGG 0.555363 8.4:+3153148 MS.gene012558:CDS
GCCACAAGAGGAGCACTTGG+TGG 0.560730 8.4:-3153026 None:intergenic
TAATGGAACTAATCTTCCGT+GGG 0.563190 8.4:-3150520 None:intergenic
TAGCTTCGAGAACCTGTAGT+AGG 0.565059 8.4:-3150392 None:intergenic
CGGGGAAGCCAAGGACCTTG+GGG 0.569355 8.4:+3153157 MS.gene012558:CDS
GCAGCCACAAGAGGAGCACT+TGG 0.569920 8.4:-3152969 None:intergenic
CCACAAGAGGAGCACTTGGT+GGG 0.571996 8.4:-3153025 None:intergenic
GACAGCATCTGAGTTGTCTA+CGG 0.572444 8.4:-3152883 None:intergenic
CCAAGGACACCATCATCTGA+TGG 0.573655 8.4:+3150329 MS.gene012558:CDS
CAGTTGAATCCATCAGATGA+TGG 0.574887 8.4:-3150338 None:intergenic
CAAGTTAAGAGTCCTACTAC+AGG 0.575076 8.4:+3150380 MS.gene012558:CDS
AAGACCTTTACCTGGGATGT+GGG 0.577183 8.4:-3151029 None:intergenic
TGTTCTGGGAGAAGCTGAGT+GGG 0.577794 8.4:-3148699 None:intergenic
GTTGATTTCACAGATGTGCA+AGG 0.578017 8.4:+3148951 MS.gene012558:intron
TGAGCTTTGGAAGATGTGGA+TGG 0.579447 8.4:-3150629 None:intergenic
GCTGCATGTACAACAAACTT+GGG 0.581848 8.4:-3150937 None:intergenic
TTGATAACCAGAAAGGAGAA+AGG 0.582120 8.4:+3150871 MS.gene012558:intron
TTGTATGGTTGGACTAGGAA+CGG 0.583444 8.4:-3150207 None:intergenic
CCACAAGAGGAGCACTTGGT+GGG 0.590936 8.4:-3152965 None:intergenic
AGTCACTTGAAGCTGCTCTT+CGG 0.591198 8.4:-3150126 None:intergenic
GGTGCTGCATCAGCCACAAG+AGG 0.591740 8.4:-3153038 None:intergenic
GTGCTAAGAAGATTGAATGC+TGG 0.592242 8.4:+3150441 MS.gene012558:CDS
CTAATGGAACTAATCTTCCG+TGG 0.592547 8.4:-3150521 None:intergenic
GGAGACGCGATGCTCAGCCA+TGG 0.594531 8.4:-3148658 None:intergenic
GGCGTATTACTAACGATTGG+AGG 0.596429 8.4:-3150245 None:intergenic
GATGTGGGGATATCTGGTGA+TGG 0.598874 8.4:+3150964 MS.gene012558:CDS
TCAGCCACAAGAGGAGCACT+TGG 0.605078 8.4:-3153029 None:intergenic
GTACATGCAGCAGGAGATGT+GGG 0.608887 8.4:+3150949 MS.gene012558:CDS
TGAAGGGTAACCCACATCCC+AGG 0.609054 8.4:+3151019 MS.gene012558:CDS
ACAGGCGTATTACTAACGAT+TGG 0.613651 8.4:-3150248 None:intergenic
AAAACACTGTTCTCTGCAGT+CGG 0.615994 8.4:-3150572 None:intergenic
GTATGGACAGAAAATGGTGA+AGG 0.618010 8.4:+3151002 MS.gene012558:CDS
CATCTGATGGATTCAACTGG+CGG 0.620518 8.4:+3150342 MS.gene012558:CDS
TATGGACAGAAAATGGTGAA+GGG 0.621435 8.4:+3151003 MS.gene012558:CDS
GGTTTCTTGTCAGAACTGCA+AGG 0.624573 8.4:-3150662 None:intergenic
TCTGAATGATGAATTCAGCA+AGG 0.627601 8.4:-3153236 None:intergenic
CGTCTCCGAAGCTCTCCCTG+TGG 0.630117 8.4:+3148674 MS.gene012558:CDS
GGGGAAGCCAAGGACCTTGG+GGG 0.641628 8.4:+3153158 MS.gene012558:CDS
TGGAACAGAAACAGAAGACA+AGG 0.643346 8.4:-3150309 None:intergenic
AATTTCTACTCAATGGTCAG+TGG 0.645416 8.4:+3153115 MS.gene012558:CDS
TTGTTCTGGGAGAAGCTGAG+TGG 0.645709 8.4:-3148700 None:intergenic
CAATGGTCAGTGGACACCGA+AGG 0.651277 8.4:+3153125 MS.gene012558:CDS
TGTACATGCAGCAGGAGATG+TGG 0.652491 8.4:+3150948 MS.gene012558:CDS
GAAGCTGAGTGGGTCCCACA+GGG 0.663562 8.4:-3148689 None:intergenic
GCTGTCATCATAACTTACAA+GGG 0.670071 8.4:+3152900 MS.gene012558:CDS
AATCGTTAGTAATACGCCTG+TGG 0.690746 8.4:+3150250 MS.gene012558:CDS
TACATGCAGCAGGAGATGTG+GGG 0.691459 8.4:+3150950 MS.gene012558:CDS
ACGAGCCAGATCCAAAACGA+AGG 0.695030 8.4:+3150744 MS.gene012558:CDS
TATCTGGTGATGGATACCGA+TGG 0.698652 8.4:+3150974 MS.gene012558:CDS
CCTGTGCCGAAGAAACGACA+CGG 0.708728 8.4:+3152942 MS.gene012558:CDS
ATGGAACTAATCTTCCGTGG+GGG 0.722546 8.4:-3150518 None:intergenic
CAACTGCAAATTATTCATGG+AGG 0.726603 8.4:-3153063 None:intergenic
AATGGAACTAATCTTCCGTG+GGG 0.732859 8.4:-3150519 None:intergenic
CACCGAAGGAGAACTAACCG+GGG 0.738224 8.4:+3153139 MS.gene012558:CDS
GCACAGCAAATTATTCATGG+AGG 0.739037 8.4:-3153003 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAATAAATTAAACTTA+AGG - chr8.4:3151551-3151570 None:intergenic 10.0%
!! ATATATAAATGTAAGTATAT+TGG + chr8.4:3151935-3151954 MS.gene012558:intron 10.0%
!! ATATTGTTCATAAATTTATA+TGG + chr8.4:3151348-3151367 MS.gene012558:intron 10.0%
!! AAATTATCTAACCTTAATTT+CGG - chr8.4:3149009-3149028 None:intergenic 15.0%
!! AATATTGTCATATTATCTTA+GGG + chr8.4:3151440-3151459 MS.gene012558:intron 15.0%
!! ACAAAATAAATAATAACCAA+AGG - chr8.4:3151088-3151107 None:intergenic 15.0%
!! ATGATAGTATATAAATGTTA+AGG + chr8.4:3151911-3151930 MS.gene012558:intron 15.0%
!! TTAATATCATTCATATAAAC+AGG - chr8.4:3152720-3152739 None:intergenic 15.0%
!! AAATAATATGATTTCATACG+CGG - chr8.4:3150775-3150794 None:intergenic 20.0%
!! AAGTTAAGCTAAAACAAATA+TGG + chr8.4:3151756-3151775 MS.gene012558:intron 20.0%
!! ACGGTAATAAAGTTAAAATT+TGG - chr8.4:3149038-3149057 None:intergenic 20.0%
!! AGAAAAGGAAAAAAATTCAA+TGG - chr8.4:3152801-3152820 None:intergenic 20.0%
!! ATATTATGAAAGTTGAGTTT+AGG + chr8.4:3151159-3151178 MS.gene012558:intron 20.0%
!! ATGGATAGAATAAAAAACTT+GGG + chr8.4:3152498-3152517 MS.gene012558:intron 20.0%
!! GAAAAAAATTGTGAATTGTT+TGG + chr8.4:3148929-3148948 MS.gene012558:intron 20.0%
!! GAATATTGTCATATTATCTT+AGG + chr8.4:3151439-3151458 MS.gene012558:intron 20.0%
!! GTGTTAAATTAATACATGAA+AGG + chr8.4:3151784-3151803 MS.gene012558:intron 20.0%
!! TCTGTTTCAATAAAATAACA+CGG - chr8.4:3149057-3149076 None:intergenic 20.0%
!! TGCTTTATAGATTATGAATT+TGG + chr8.4:3149363-3149382 MS.gene012558:intron 20.0%
!! TGTTCATAAATTTATATGGA+TGG + chr8.4:3151352-3151371 MS.gene012558:intron 20.0%
!! TTTATTAGTACAAAATCTAC+AGG + chr8.4:3149825-3149844 MS.gene012558:intron 20.0%
!!! AAAGATTTTGTAACAGAATT+TGG - chr8.4:3150182-3150201 None:intergenic 20.0%
!!! AGTCAAATTTATCTAGAATT+TGG - chr8.4:3151476-3151495 None:intergenic 20.0%
!!! ATTTAATTTGATAACCAGAA+AGG + chr8.4:3150864-3150883 MS.gene012558:intron 20.0%
!!! ATTTTGTGCATGTTTATATT+TGG + chr8.4:3151655-3151674 MS.gene012558:intron 20.0%
!!! TTGAAAAGTTTGTTTGATTA+GGG + chr8.4:3149220-3149239 MS.gene012558:intron 20.0%
!!! TTGCAACTTTTTATTTTTGA+AGG + chr8.4:3151625-3151644 MS.gene012558:intron 20.0%
!!! TTGTTAAATGCTTCTATTTT+TGG + chr8.4:3149404-3149423 MS.gene012558:intron 20.0%
!!! TTGTTTCTTACTTTGAAATA+CGG + chr8.4:3152180-3152199 MS.gene012558:intron 20.0%
!!! TTTTTTTTTGTTGCTGAAAA+AGG - chr8.4:3148904-3148923 None:intergenic 20.0%
! AAAAGCTCAAGAGATAAAAA+AGG + chr8.4:3148725-3148744 MS.gene012558:CDS 25.0%
! AAACAGAAATTATGCATACT+TGG - chr8.4:3151065-3151084 None:intergenic 25.0%
! AATTCAAAGTAAGAAACATG+TGG - chr8.4:3152246-3152265 None:intergenic 25.0%
! AGACATATTCTGTATTTGTA+TGG - chr8.4:3150225-3150244 None:intergenic 25.0%
! AGTAGAAAAGAAAGCAAAAA+AGG - chr8.4:3151312-3151331 None:intergenic 25.0%
! ATATTCTGTATTTGTATGGT+TGG - chr8.4:3150221-3150240 None:intergenic 25.0%
! ATCAGAAAATTTCTACTCAA+TGG + chr8.4:3153108-3153127 MS.gene012558:CDS 25.0%
! ATGTTTCTTACTTTGAATTC+CGG + chr8.4:3152247-3152266 MS.gene012558:intron 25.0%
! ATTTCAAAGTAAGAAACAAG+TGG - chr8.4:3152179-3152198 None:intergenic 25.0%
! CATGGATAGAATAAAAAACT+TGG + chr8.4:3152497-3152516 MS.gene012558:intron 25.0%
! CTAAAGAAATCAAATACCTT+GGG - chr8.4:3150007-3150026 None:intergenic 25.0%
! CTGCCACAATTAAAATAAAT+GGG - chr8.4:3150821-3150840 None:intergenic 25.0%
! GATAAATTACTATAGCCTAT+TGG + chr8.4:3152007-3152026 MS.gene012558:intron 25.0%
! GTTACATTCATAGAAGTTTA+CGG - chr8.4:3152396-3152415 None:intergenic 25.0%
! TAGTAGTTTCTGATAAGAAA+AGG - chr8.4:3152816-3152835 None:intergenic 25.0%
! TGATTTCTTTAGCACTAAAT+AGG + chr8.4:3150015-3150034 MS.gene012558:intron 25.0%
! TGGATAGAATAAAAAACTTG+GGG + chr8.4:3152499-3152518 MS.gene012558:intron 25.0%
! TGTTTCACAATTTAACCAAT+AGG - chr8.4:3152025-3152044 None:intergenic 25.0%
!! AAAACTTGAAGTCTCAATTT+TGG - chr8.4:3149680-3149699 None:intergenic 25.0%
!! AAATTCATTCCTCCTTTTTA+TGG - chr8.4:3149547-3149566 None:intergenic 25.0%
!! AATTCATTCCTCCTTTTTAT+GGG - chr8.4:3149546-3149565 None:intergenic 25.0%
!! AGATACATTTTGTAGAACAA+GGG - chr8.4:3152591-3152610 None:intergenic 25.0%
!! ATAATGTGTAATTTGTATCG+TGG + chr8.4:3151962-3151981 MS.gene012558:intron 25.0%
!! ATTCAACTTTTATGCGATTT+TGG - chr8.4:3149628-3149647 None:intergenic 25.0%
!! CTAATCAAACAAACTTTTCA+AGG - chr8.4:3149221-3149240 None:intergenic 25.0%
!! CTTGAAAAGTTTGTTTGATT+AGG + chr8.4:3149219-3149238 MS.gene012558:intron 25.0%
!! GAGTTTTCATCTAACAAATT+AGG + chr8.4:3149876-3149895 MS.gene012558:intron 25.0%
!! GTAGAAATTTTCTGATTTTG+TGG - chr8.4:3153104-3153123 None:intergenic 25.0%
!! GTTTAGGACTTAGTTATTAT+AGG + chr8.4:3149431-3149450 MS.gene012558:intron 25.0%
!! TAGATACATTTTGTAGAACA+AGG - chr8.4:3152592-3152611 None:intergenic 25.0%
!! TAGATTATGAATTTGGAATC+TGG + chr8.4:3149370-3149389 MS.gene012558:intron 25.0%
!! TTCGAATTTTCATTAGAACT+CGG - chr8.4:3148801-3148820 None:intergenic 25.0%
!!! AAATGCTTCTATTTTTGGTA+GGG + chr8.4:3149409-3149428 MS.gene012558:intron 25.0%
!!! AAGCCCATTTATTTTAATTG+TGG + chr8.4:3150815-3150834 MS.gene012558:intron 25.0%
!!! GTAAACAAAAAAAGTACTTC+TGG + chr8.4:3150278-3150297 MS.gene012558:CDS 25.0%
!!! TAAATGCTTCTATTTTTGGT+AGG + chr8.4:3149408-3149427 MS.gene012558:intron 25.0%
!!! TATTTGCCAAACTGATTTTT+CGG + chr8.4:3152682-3152701 MS.gene012558:intron 25.0%
!!! TGAATTCTGAATTTTAACAC+TGG + chr8.4:3149764-3149783 MS.gene012558:intron 25.0%
!!! TGTTTCTTACTTTGAAATAC+GGG + chr8.4:3152181-3152200 MS.gene012558:intron 25.0%
AAAAAGCCGAAAAATCAGTT+TGG - chr8.4:3152691-3152710 None:intergenic 30.0%
AAGAAATACTGTCTTGTCTT+GGG - chr8.4:3149944-3149963 None:intergenic 30.0%
AAGCAGTTTGAAAAATGACA+AGG + chr8.4:3151263-3151282 MS.gene012558:intron 30.0%
AATTCAGCATTTAAGCTACT+GGG - chr8.4:3149750-3149769 None:intergenic 30.0%
ACTCAACTGCAAATTATTCA+TGG - chr8.4:3153069-3153088 None:intergenic 30.0%
ATGGTAGTATTATGTATCCA+TGG + chr8.4:3152618-3152637 MS.gene012558:intron 30.0%
CAAAACTCATCTGATATCAA+TGG + chr8.4:3150686-3150705 MS.gene012558:CDS 30.0%
CAAAATGTATCTATCCATCA+TGG + chr8.4:3152599-3152618 MS.gene012558:intron 30.0%
CAAAGATGGAAAAGCAATTA+GGG - chr8.4:3148832-3148851 None:intergenic 30.0%
CAATATTTACCAACTTACCT+AGG - chr8.4:3152053-3152072 None:intergenic 30.0%
CCTGCCACAATTAAAATAAA+TGG - chr8.4:3150822-3150841 None:intergenic 30.0%
GACAAATTACTATAGCCTAT+AGG + chr8.4:3151811-3151830 MS.gene012558:intron 30.0%
GATACATAATACTACCATGA+TGG - chr8.4:3152616-3152635 None:intergenic 30.0%
GCTAAAGAAATCAAATACCT+TGG - chr8.4:3150008-3150027 None:intergenic 30.0%
GGATAGAATAAAAAACTTGG+GGG + chr8.4:3152500-3152519 MS.gene012558:intron 30.0%
GTACAAATGAAATGTCTATC+CGG + chr8.4:3149795-3149814 MS.gene012558:intron 30.0%
TCATCTGATATCAATGGTAA+TGG + chr8.4:3150692-3150711 MS.gene012558:CDS 30.0%
TCTAACATCAACACATCATA+TGG - chr8.4:3152418-3152437 None:intergenic 30.0%
TGCATAATTTCTGTTTCCTT+TGG + chr8.4:3151069-3151088 MS.gene012558:intron 30.0%
TGGTTAAATTGTGAAACAAG+AGG + chr8.4:3152027-3152046 MS.gene012558:intron 30.0%
TGTTTCTTACTTTGAATTCC+GGG + chr8.4:3152248-3152267 MS.gene012558:intron 30.0%
TTCTCAGATTCAGAACAAAA+AGG - chr8.4:3149319-3149338 None:intergenic 30.0%
TTGAATGTAATACCCTTATG+TGG + chr8.4:3149246-3149265 MS.gene012558:intron 30.0%
! GTTTAACTTAGACCAATAAG+TGG + chr8.4:3151878-3151897 MS.gene012558:intron 30.0%
! GTTTGGCAAATAATTTTGTC+CGG - chr8.4:3152674-3152693 None:intergenic 30.0%
! TAATTTGCAGTTGAGTAAAC+CGG + chr8.4:3153073-3153092 MS.gene012558:CDS 30.0%
! TGAAGTCTCAATTTTGGATA+TGG - chr8.4:3149674-3149693 None:intergenic 30.0%
! TGTATTTTCTTGAGGAAACA+TGG - chr8.4:3152292-3152311 None:intergenic 30.0%
! TTGATATCAGATGAGTTTTG+TGG - chr8.4:3150686-3150705 None:intergenic 30.0%
! TTGTTCTGAATCTGAGAATA+AGG + chr8.4:3149321-3149340 MS.gene012558:intron 30.0%
! TTTAGGGCATGGTTATAATT+GGG + chr8.4:3149187-3149206 MS.gene012558:intron 30.0%
!! AACAAAAAAAGTACTTCTGG+CGG + chr8.4:3150281-3150300 MS.gene012558:CDS 30.0%
!! ACTTCCTTTTCATTTTCAAG+AGG - chr8.4:3150068-3150087 None:intergenic 30.0%
!! GTTTCTTACTTTGAAATACG+GGG + chr8.4:3152182-3152201 MS.gene012558:intron 30.0%
!! TTTTGACTGATCCCATAAAA+AGG + chr8.4:3149532-3149551 MS.gene012558:intron 30.0%
!! TTTTTCCTTTTACGGATTGT+TGG + chr8.4:3152748-3152767 MS.gene012558:intron 30.0%
!!! AGCTCACTTTTTTCCTTTTA+CGG + chr8.4:3152740-3152759 MS.gene012558:intron 30.0%
!!! CCATTTATTTTAATTGTGGC+AGG + chr8.4:3150819-3150838 MS.gene012558:intron 30.0%
!!! TGGTAAAATAGTTTTGAACG+AGG + chr8.4:3150712-3150731 MS.gene012558:CDS 30.0%
!!! TTCTATTTTTGGTAGGGTTT+AGG + chr8.4:3149415-3149434 MS.gene012558:intron 30.0%
AACAAGAGGCTAAGATAAGT+TGG + chr8.4:3151845-3151864 MS.gene012558:intron 35.0%
AAGATACAGTTCTGTTTCCA+TGG - chr8.4:3152638-3152657 None:intergenic 35.0%
AAGGCAAAAATGCGCTTAAA+AGG + chr8.4:3152317-3152336 MS.gene012558:intron 35.0%
AATAGACCGAAAATCGAAAC+AGG - chr8.4:3149475-3149494 None:intergenic 35.0%
AATCCCTAATACGCTGAATT+CGG + chr8.4:3148974-3148993 MS.gene012558:CDS 35.0%
AATTTCTACTCAATGGTCAG+TGG + chr8.4:3153115-3153134 MS.gene012558:CDS 35.0%
CAACTGCAAATTATTCATGG+AGG - chr8.4:3153066-3153085 None:intergenic 35.0%
CCAAAGATGGAAAAGCAATT+AGG - chr8.4:3148833-3148852 None:intergenic 35.0%
CTCAAGAAAATACACTGGAA+AGG + chr8.4:3152298-3152317 MS.gene012558:intron 35.0%
CTGAAAAAGGATAAACAGAG+TGG - chr8.4:3148891-3148910 None:intergenic 35.0%
GAAAACCAACAATCCGTAAA+AGG - chr8.4:3152756-3152775 None:intergenic 35.0%
GAAGAAATACTGTCTTGTCT+TGG - chr8.4:3149945-3149964 None:intergenic 35.0%
GAATTCAGCATTTAAGCTAC+TGG - chr8.4:3149751-3149770 None:intergenic 35.0%
GAGATAAAAAAGGAACCAGT+CGG + chr8.4:3148735-3148754 MS.gene012558:CDS 35.0%
GATAAACAGAGTGGAAATTG+AGG - chr8.4:3148882-3148901 None:intergenic 35.0%
GCTGTCATCATAACTTACAA+GGG + chr8.4:3152900-3152919 MS.gene012558:CDS 35.0%
GGATTAAACCACTATACCAA+TGG - chr8.4:3152225-3152244 None:intergenic 35.0%
GGTTGTCAAATCCGAAATTA+AGG + chr8.4:3148995-3149014 MS.gene012558:CDS 35.0%
GTTTCCTCAAGAAAATACAC+TGG + chr8.4:3152293-3152312 MS.gene012558:intron 35.0%
GTTTCTTACTTTGAATTCCG+GGG + chr8.4:3152249-3152268 MS.gene012558:intron 35.0%
TAAACCACTATACCAATGGT+AGG - chr8.4:3152221-3152240 None:intergenic 35.0%
TAACTTAGACCAATAAGTGG+CGG + chr8.4:3151881-3151900 MS.gene012558:intron 35.0%
TAATGGAACTAATCTTCCGT+GGG - chr8.4:3150523-3150542 None:intergenic 35.0%
TATGGACAGAAAATGGTGAA+GGG + chr8.4:3151003-3151022 MS.gene012558:CDS 35.0%
TGATCTTCGTGAAGATTCTT+AGG + chr8.4:3149714-3149733 MS.gene012558:intron 35.0%
TGATTAAGCTGAAGCTTCTA+AGG - chr8.4:3149502-3149521 None:intergenic 35.0%
TGCTAAGAAGATTGAATGCT+GGG + chr8.4:3150442-3150461 MS.gene012558:CDS 35.0%
TGCTGTCATCATAACTTACA+AGG + chr8.4:3152899-3152918 MS.gene012558:CDS 35.0%
TGGACCTCTTGAAAATGAAA+AGG + chr8.4:3150061-3150080 MS.gene012558:CDS 35.0%
TGTACTAATAAATGCGCTAC+CGG - chr8.4:3149817-3149836 None:intergenic 35.0%
TGTATGTTATGTACATCCCA+AGG + chr8.4:3149988-3150007 MS.gene012558:intron 35.0%
TGTATTTGTATGGTTGGACT+AGG - chr8.4:3150215-3150234 None:intergenic 35.0%
TGTTTCATAAGCTGACCTAT+AGG - chr8.4:3151829-3151848 None:intergenic 35.0%
TTAGGGCATGGTTATAATTG+GGG + chr8.4:3149188-3149207 MS.gene012558:intron 35.0%
! AATTATGCATACTTGGCTTG+TGG - chr8.4:3151058-3151077 None:intergenic 35.0%
! ACAAACTTGGGTTTCTTTTC+AGG - chr8.4:3150928-3150947 None:intergenic 35.0%
! ACATTTTGTAGAACAAGGGA+TGG - chr8.4:3152587-3152606 None:intergenic 35.0%
! ACGGAAGATTAGTTCCATTA+GGG + chr8.4:3150523-3150542 MS.gene012558:CDS 35.0%
! CTTTCCAGTGTATTTTCTTG+AGG - chr8.4:3152300-3152319 None:intergenic 35.0%
! GAATTTGGTGATAGTTCAGA+TGG - chr8.4:3150167-3150186 None:intergenic 35.0%
! GTTTAGGGCATGGTTATAAT+TGG + chr8.4:3149186-3149205 MS.gene012558:intron 35.0%
! TTGATAACCAGAAAGGAGAA+AGG + chr8.4:3150871-3150890 MS.gene012558:intron 35.0%
! TTTTCTTGAGGAAACATGGT+AGG - chr8.4:3152288-3152307 None:intergenic 35.0%
!! CCTAATTGCTTTTCCATCTT+TGG + chr8.4:3148830-3148849 MS.gene012558:CDS 35.0%
!! GTTTTGGATCAACGTAGTTT+CGG + chr8.4:3148852-3148871 MS.gene012558:CDS 35.0%
!! TAATTCACTTTTCTGCGACT+CGG - chr8.4:3148778-3148797 None:intergenic 35.0%
!! TGCTTTTCCATCTTTGGTTT+TGG + chr8.4:3148836-3148855 MS.gene012558:CDS 35.0%
!! TTTTTGTTTACTTCTGCCAC+AGG - chr8.4:3150269-3150288 None:intergenic 35.0%
!!! CTTGAGCTTTTTGTTGTTCT+GGG - chr8.4:3148716-3148735 None:intergenic 35.0%
!!! GCAGCTTGCAACTTTTTTAT+TGG - chr8.4:3151230-3151249 None:intergenic 35.0%
!!! TAGAGGGGGTCAATTTTTTA+TGG + chr8.4:3152090-3152109 MS.gene012558:intron 35.0%
!!! TCTTGAGCTTTTTGTTGTTC+TGG - chr8.4:3148717-3148736 None:intergenic 35.0%
AAAAAATTGACCCCCTCTAC+TGG - chr8.4:3152089-3152108 None:intergenic 40.0%
AAAACACTGTTCTCTGCAGT+CGG - chr8.4:3150575-3150594 None:intergenic 40.0%
AAATACGGGGTTCGAATCTT+GGG + chr8.4:3152195-3152214 MS.gene012558:intron 40.0%
AAATAGGCCATTTCATGCTC+AGG + chr8.4:3150031-3150050 MS.gene012558:intron 40.0%
AATCGTTAGTAATACGCCTG+TGG + chr8.4:3150250-3150269 MS.gene012558:CDS 40.0%
AATGGAACTAATCTTCCGTG+GGG - chr8.4:3150522-3150541 None:intergenic 40.0%
AATTGTGAAACAAGAGGCCT+AGG + chr8.4:3152033-3152052 MS.gene012558:intron 40.0%
ACAACCGAATTCAGCGTATT+AGG - chr8.4:3148981-3149000 None:intergenic 40.0%
ACAGGCGTATTACTAACGAT+TGG - chr8.4:3150251-3150270 None:intergenic 40.0%
ACATCCACATCCTTAATTCG+AGG + chr8.4:3152463-3152482 MS.gene012558:intron 40.0%
AGCAAATTATTCATGGAGGC+AGG - chr8.4:3153002-3153021 None:intergenic 40.0%
AGCTACACAGTTTCCACATA+AGG - chr8.4:3149262-3149281 None:intergenic 40.0%
AGGTCAGCTTATGAAACAAG+AGG + chr8.4:3151831-3151850 MS.gene012558:intron 40.0%
AGGTGTTTCTTCTTGAGCTT+TGG - chr8.4:3150645-3150664 None:intergenic 40.0%
ATTGAATGCTGGGATCATTC+AGG + chr8.4:3150452-3150471 MS.gene012558:CDS 40.0%
CAACCGAATTCAGCGTATTA+GGG - chr8.4:3148980-3148999 None:intergenic 40.0%
CAAGTTAAGAGTCCTACTAC+AGG + chr8.4:3150380-3150399 MS.gene012558:CDS 40.0%
CACCAGCTTGAATAAGATCT+TGG - chr8.4:3151289-3151308 None:intergenic 40.0%
CAGTTGAATCCATCAGATGA+TGG - chr8.4:3150341-3150360 None:intergenic 40.0%
CGCAAACTTACTTTCCCTAA+TGG - chr8.4:3150540-3150559 None:intergenic 40.0%
CGTTGATCCAAAACCAAAGA+TGG - chr8.4:3148846-3148865 None:intergenic 40.0%
CTAATGGAACTAATCTTCCG+TGG - chr8.4:3150524-3150543 None:intergenic 40.0%
GAAAATCGAAACAGGAGACT+CGG - chr8.4:3149467-3149486 None:intergenic 40.0%
GATTCAACTGGCGGAAATAT+GGG + chr8.4:3150351-3150370 MS.gene012558:CDS 40.0%
GCACAGCAAATTATTCATGG+AGG - chr8.4:3153006-3153025 None:intergenic 40.0%
GCTACACAGTTTCCACATAA+GGG - chr8.4:3149261-3149280 None:intergenic 40.0%
GCTGCATGTACAACAAACTT+GGG - chr8.4:3150940-3150959 None:intergenic 40.0%
GGATGGAAACAGACATGTTT+CGG - chr8.4:3152570-3152589 None:intergenic 40.0%
GTATGGACAGAAAATGGTGA+AGG + chr8.4:3151002-3151021 MS.gene012558:CDS 40.0%
GTGCTAAGAAGATTGAATGC+TGG + chr8.4:3150441-3150460 MS.gene012558:CDS 40.0%
GTGGATAAAGACCTTTACCT+GGG - chr8.4:3151039-3151058 None:intergenic 40.0%
GTGGATGGATCAGAATCTTT+CGG - chr8.4:3150617-3150636 None:intergenic 40.0%
GTTAAACTGAGACCAGTAGA+GGG + chr8.4:3152074-3152093 MS.gene012558:intron 40.0%
TGACTGATCCCATAAAAAGG+AGG + chr8.4:3149535-3149554 MS.gene012558:intron 40.0%
TGATCATTTGCAGTAGTTGC+TGG + chr8.4:3149164-3149183 MS.gene012558:intron 40.0%
TGCAAATTATTCATGGAGGC+AGG - chr8.4:3153062-3153081 None:intergenic 40.0%
TGCTGCATGTACAACAAACT+TGG - chr8.4:3150941-3150960 None:intergenic 40.0%
TGGAACAGAAACAGAAGACA+AGG - chr8.4:3150312-3150331 None:intergenic 40.0%
TGGGCACAGCAAATTATTCA+TGG - chr8.4:3153009-3153028 None:intergenic 40.0%
TGTGGATAAAGACCTTTACC+TGG - chr8.4:3151040-3151059 None:intergenic 40.0%
TGTTAAACTGAGACCAGTAG+AGG + chr8.4:3152073-3152092 MS.gene012558:intron 40.0%
TTAAACTGAGACCAGTAGAG+GGG + chr8.4:3152075-3152094 MS.gene012558:intron 40.0%
! ATAACGTGTAGCTTGTATCG+TGG + chr8.4:3152139-3152158 MS.gene012558:intron 40.0%
! CACGGAAGATTAGTTCCATT+AGG + chr8.4:3150522-3150541 MS.gene012558:CDS 40.0%
! GAGTCTCCTGTTTCGATTTT+CGG + chr8.4:3149466-3149485 MS.gene012558:intron 40.0%
! GTTGATTTCACAGATGTGCA+AGG + chr8.4:3148951-3148970 MS.gene012558:intron 40.0%
! TAGCTTGTATCGTGGTATAG+TGG + chr8.4:3152147-3152166 MS.gene012558:intron 40.0%
! TTGTATGGTTGGACTAGGAA+CGG - chr8.4:3150210-3150229 None:intergenic 40.0%
! TTTGGTGATAGTTCAGATGG+TGG - chr8.4:3150164-3150183 None:intergenic 40.0%
!! AAGTTTGTTGTACATGCAGC+AGG + chr8.4:3150940-3150959 MS.gene012558:CDS 40.0%
!! CATCATCTGATGGATTCAAC+TGG + chr8.4:3150339-3150358 MS.gene012558:CDS 40.0%
!! TGTCTTCTGTTTCTGTTCCA+AGG + chr8.4:3150312-3150331 MS.gene012558:CDS 40.0%
!! TTCTTGAGCTTTGGAAGATG+TGG - chr8.4:3150636-3150655 None:intergenic 40.0%
!! TTGCAGTAGTTGCTGGTTTA+GGG + chr8.4:3149171-3149190 MS.gene012558:intron 40.0%
!! TTTGCAGTAGTTGCTGGTTT+AGG + chr8.4:3149170-3149189 MS.gene012558:intron 40.0%
!!! GTTGCTAAGCTAGTTTTGCA+AGG - chr8.4:3152366-3152385 None:intergenic 40.0%
AAACATGGTAGGCCCAAGAT+TGG - chr8.4:3152277-3152296 None:intergenic 45.0%
AAAGACCTTTACCTGGGATG+TGG - chr8.4:3151033-3151052 None:intergenic 45.0%
AACAAGAGGCCTAGGTAAGT+TGG + chr8.4:3152041-3152060 MS.gene012558:intron 45.0%
AAGACCTTTACCTGGGATGT+GGG - chr8.4:3151032-3151051 None:intergenic 45.0%
AATTCCGGGGTTCCAATCTT+GGG + chr8.4:3152262-3152281 MS.gene012558:intron 45.0%
ACATCCTTAATTCGAGGCGT+CGG + chr8.4:3152469-3152488 MS.gene012558:intron 45.0%
ACCGTTTCCTGAGCATGAAA+TGG - chr8.4:3150041-3150060 None:intergenic 45.0%
AGTCACTTGAAGCTGCTCTT+CGG - chr8.4:3150129-3150148 None:intergenic 45.0%
ATGGAACTAATCTTCCGTGG+GGG - chr8.4:3150521-3150540 None:intergenic 45.0%
CAAGTCACCTTTCTCCTTTC+TGG - chr8.4:3150881-3150900 None:intergenic 45.0%
CAGAAAGGAGAAAGGTGACT+TGG + chr8.4:3150879-3150898 MS.gene012558:intron 45.0%
CAGGTTCTCGAAGCTATTAC+AGG + chr8.4:3150399-3150418 MS.gene012558:CDS 45.0%
CATGTTTCGGTGGTCAGTAA+CGG - chr8.4:3152557-3152576 None:intergenic 45.0%
CATTCGCACATGCTGAACAT+CGG + chr8.4:3152438-3152457 MS.gene012558:intron 45.0%
GAAAACGAGATGCAATGACC+AGG + chr8.4:3149582-3149601 MS.gene012558:intron 45.0%
GAAATACGGGGTTCGAATCT+TGG + chr8.4:3152194-3152213 MS.gene012558:intron 45.0%
GACAGCATCTGAGTTGTCTA+CGG - chr8.4:3152886-3152905 None:intergenic 45.0%
GCCATTTCATGCTCAGGAAA+CGG + chr8.4:3150037-3150056 MS.gene012558:intron 45.0%
GCGCAAGTATGGACAGAAAA+TGG + chr8.4:3150996-3151015 MS.gene012558:CDS 45.0%
GGATTCAACTGGCGGAAATA+TGG + chr8.4:3150350-3150369 MS.gene012558:CDS 45.0%
GGCCAAGATCTTATTCAAGC+TGG + chr8.4:3151284-3151303 MS.gene012558:intron 45.0%
GGCGTATTACTAACGATTGG+AGG - chr8.4:3150248-3150267 None:intergenic 45.0%
GGTTTCTTGTCAGAACTGCA+AGG - chr8.4:3150665-3150684 None:intergenic 45.0%
GTCTCAATGTGCTTTCGAAC+AGG - chr8.4:3152861-3152880 None:intergenic 45.0%
TAAACTGAGACCAGTAGAGG+GGG + chr8.4:3152076-3152095 MS.gene012558:intron 45.0%
TACTACAGATGCACTTCTGC+TGG + chr8.4:3152831-3152850 MS.gene012558:CDS 45.0%
TAGCTTCGAGAACCTGTAGT+AGG - chr8.4:3150395-3150414 None:intergenic 45.0%
TGAGGTACAGATGGAAGTCA+CGG - chr8.4:3152528-3152547 None:intergenic 45.0%
TGCTAAAAGAGAAGCTGTCC+AGG + chr8.4:3150088-3150107 MS.gene012558:CDS 45.0%
TGGAAACAGACATGTTTCGG+TGG - chr8.4:3152567-3152586 None:intergenic 45.0%
TTTCATGCTCAGGAAACGGT+TGG + chr8.4:3150041-3150060 MS.gene012558:intron 45.0%
! TTCTGATTTTGTGGCGAGTC+CGG - chr8.4:3153095-3153114 None:intergenic 45.0%
!! ACTTGCCTTCGTTTTGGATC+TGG - chr8.4:3150752-3150771 None:intergenic 45.0%
!! CATCTGATGGATTCAACTGG+CGG + chr8.4:3150342-3150361 MS.gene012558:CDS 45.0%
!! GAATCTTTCGGAGCATTGAC+AGG - chr8.4:3150605-3150624 None:intergenic 45.0%
!! TATCTGGTGATGGATACCGA+TGG + chr8.4:3150974-3150993 MS.gene012558:CDS 45.0%
!! TGAGCTTTGGAAGATGTGGA+TGG - chr8.4:3150632-3150651 None:intergenic 45.0%
!!! AGCTAGTTTTGCAAGGAGGA+CGG - chr8.4:3152359-3152378 None:intergenic 45.0%
!!! CGGATCTTTTGAGGTACAGA+TGG - chr8.4:3152537-3152556 None:intergenic 45.0%
!!! GCTAAGCTAGTTTTGCAAGG+AGG - chr8.4:3152363-3152382 None:intergenic 45.0%
!!! GGTCAGTAACGGATCTTTTG+AGG - chr8.4:3152546-3152565 None:intergenic 45.0%
ACACCGAAGGAGAACTAACC+GGG + chr8.4:3153138-3153157 MS.gene012558:CDS 50.0%
ACGAGCCAGATCCAAAACGA+AGG + chr8.4:3150744-3150763 MS.gene012558:CDS 50.0%
ATCCATGCTCCGCCACTTAT+TGG - chr8.4:3151893-3151912 None:intergenic 50.0%
CCAAGGACACCATCATCTGA+TGG + chr8.4:3150329-3150348 MS.gene012558:CDS 50.0%
CTATTGCTTTCTCACCCCCA+AGG - chr8.4:3153175-3153194 None:intergenic 50.0%
GAATTCCGGGGTTCCAATCT+TGG + chr8.4:3152261-3152280 MS.gene012558:intron 50.0%
GACACCGAAGGAGAACTAAC+CGG + chr8.4:3153137-3153156 MS.gene012558:CDS 50.0%
GACGCCTCGAATTAAGGATG+TGG - chr8.4:3152470-3152489 None:intergenic 50.0%
GATGTGGGGATATCTGGTGA+TGG + chr8.4:3150964-3150983 MS.gene012558:CDS 50.0%
GTAACCCACATCCCAGGTAA+AGG + chr8.4:3151025-3151044 MS.gene012558:intron 50.0%
GTACATGCAGCAGGAGATGT+GGG + chr8.4:3150949-3150968 MS.gene012558:CDS 50.0%
TACATGCAGCAGGAGATGTG+GGG + chr8.4:3150950-3150969 MS.gene012558:CDS 50.0%
TCGAATCTTGGGCCTACCAT+TGG + chr8.4:3152206-3152225 MS.gene012558:intron 50.0%
TCTGTCCATACTTGCGCCAT+CGG - chr8.4:3150993-3151012 None:intergenic 50.0%
TGGGCCTACCATTGGTATAG+TGG + chr8.4:3152214-3152233 MS.gene012558:intron 50.0%
TGTACATGCAGCAGGAGATG+TGG + chr8.4:3150948-3150967 MS.gene012558:CDS 50.0%
! CCATCAGATGATGGTGTCCT+TGG - chr8.4:3150332-3150351 None:intergenic 50.0%
! TTCCCCGGTTAGTTCTCCTT+CGG - chr8.4:3153144-3153163 None:intergenic 50.0%
!! GTAGTTGCTGGTTTAGGGCA+TGG + chr8.4:3149176-3149195 MS.gene012558:intron 50.0%
!! TGTTCTGGGAGAAGCTGAGT+GGG - chr8.4:3148702-3148721 None:intergenic 50.0%
!! TTCACTTTTCTGCGACTCGG+TGG - chr8.4:3148775-3148794 None:intergenic 50.0%
!! TTGTTCTGGGAGAAGCTGAG+TGG - chr8.4:3148703-3148722 None:intergenic 50.0%
!!! CTAGTTTTGCAAGGAGGACG+GGG - chr8.4:3152357-3152376 None:intergenic 50.0%
!!! GCTAGTTTTGCAAGGAGGAC+GGG - chr8.4:3152358-3152377 None:intergenic 50.0%
AGAACTAACCGGGGAAGCCA+AGG + chr8.4:3153148-3153167 MS.gene012558:CDS 55.0%
AGCACAGTCATGATCCCCCA+CGG + chr8.4:3150504-3150523 MS.gene012558:CDS 55.0%
CAATGGTCAGTGGACACCGA+AGG + chr8.4:3153125-3153144 MS.gene012558:CDS 55.0%
CACCGAAGGAGAACTAACCG+GGG + chr8.4:3153139-3153158 MS.gene012558:CDS 55.0%
CACTTTGTAGCCAGAGAGCC+TGG - chr8.4:3149603-3149622 None:intergenic 55.0%
CCTGTGCCGAAGAAACGACA+CGG + chr8.4:3152942-3152961 MS.gene012558:CDS 55.0%
GATGCAATGACCAGGCTCTC+TGG + chr8.4:3149590-3149609 MS.gene012558:intron 55.0%
GCAGGAGATGTGGGGATATC+TGG + chr8.4:3150958-3150977 MS.gene012558:CDS 55.0%
GCTCGAACGCTTCTGAGCAT+AGG + chr8.4:3153200-3153219 MS.gene012558:CDS 55.0%
GGATACCGATGGCGCAAGTA+TGG + chr8.4:3150985-3151004 MS.gene012558:CDS 55.0%
TAGGCCCAAGATTGGAACCC+CGG - chr8.4:3152269-3152288 None:intergenic 55.0%
TGAAGGGTAACCCACATCCC+AGG + chr8.4:3151019-3151038 MS.gene012558:CDS 55.0%
TGTCCAGGAACCTTCAGCTC+AGG + chr8.4:3150103-3150122 MS.gene012558:CDS 55.0%
TTTCTCACCCCCAAGGTCCT+TGG - chr8.4:3153168-3153187 None:intergenic 55.0%
! ACGCGGACTTGCCTTCGTTT+TGG - chr8.4:3150758-3150777 None:intergenic 55.0%
! GACCAATAAGTGGCGGAGCA+TGG + chr8.4:3151888-3151907 MS.gene012558:intron 55.0%
!! AGCACCGACGCCTCGAATTA+AGG - chr8.4:3152476-3152495 None:intergenic 55.0%
!! CCACAAGAGGAGCACTTGGT+GGG - chr8.4:3152968-3152987 None:intergenic 55.0%
!! GTTCTCTGCAGTCGGTTCGT+TGG - chr8.4:3150567-3150586 None:intergenic 55.0%
!! TCAGCCACAAGAGGAGCACT+TGG - chr8.4:3153032-3153051 None:intergenic 55.0%
!! TCTGCAGTCGGTTCGTTGGA+GGG - chr8.4:3150563-3150582 None:intergenic 55.0%
AGAAGCTGAGTGGGTCCCAC+AGG - chr8.4:3148693-3148712 None:intergenic 60.0%
CCCACCAAGTGCTCCTCTTG+TGG + chr8.4:3152965-3152984 MS.gene012558:CDS 60.0%
GAAGCTGAGTGGGTCCCACA+GGG - chr8.4:3148692-3148711 None:intergenic 60.0%
GTCTCCGAAGCTCTCCCTGT+GGG + chr8.4:3148675-3148694 MS.gene012558:CDS 60.0%
TGCTCTTCGGCCTGAGCTGA+AGG - chr8.4:3150116-3150135 None:intergenic 60.0%
TTGCAAGGAGGACGGGGACT+TGG - chr8.4:3152351-3152370 None:intergenic 60.0%
! GGTGCTGCATCAGCCACAAG+AGG - chr8.4:3153041-3153060 None:intergenic 60.0%
!! CCGTGTCGTTTCTTCGGCAC+AGG - chr8.4:3152945-3152964 None:intergenic 60.0%
!! CTCTGCAGTCGGTTCGTTGG+AGG - chr8.4:3150564-3150583 None:intergenic 60.0%
!! GCAGCCACAAGAGGAGCACT+TGG - chr8.4:3152972-3152991 None:intergenic 60.0%
!! GCCACAAGAGGAGCACTTGG+TGG - chr8.4:3152969-3152988 None:intergenic 60.0%
!! GGTGGGCCGTGTCGTTTCTT+CGG - chr8.4:3152951-3152970 None:intergenic 60.0%
!! TTCGAGGCGTCGGTGCTACA+TGG + chr8.4:3152479-3152498 MS.gene012558:intron 60.0%
!! TTCTGCGACTCGGTGGCTGA+CGG - chr8.4:3148768-3148787 None:intergenic 60.0%
ACCGGGGAAGCCAAGGACCT+TGG + chr8.4:3153155-3153174 MS.gene012558:CDS 65.0%
CCCAAGGTCCTTGGCTTCCC+CGG - chr8.4:3153159-3153178 None:intergenic 65.0%
CCGGGGAAGCCAAGGACCTT+GGG + chr8.4:3153156-3153175 MS.gene012558:CDS 65.0%
CGGCCTGAGCTGAAGGTTCC+TGG - chr8.4:3150109-3150128 None:intergenic 65.0%
CGGGGAAGCCAAGGACCTTG+GGG + chr8.4:3153157-3153176 MS.gene012558:CDS 65.0%
CGTCTCCGAAGCTCTCCCTG+TGG + chr8.4:3148674-3148693 MS.gene012558:CDS 65.0%
GCTGACGGTGATTCGCCGAC+TGG - chr8.4:3148753-3148772 None:intergenic 65.0%
GGGGAAGCCAAGGACCTTGG+GGG + chr8.4:3153158-3153177 MS.gene012558:CDS 65.0%
GGGTCCCACAGGGAGAGCTT+CGG - chr8.4:3148682-3148701 None:intergenic 65.0%
! GGTGCTGCAGCAGCCACAAG+AGG - chr8.4:3152981-3153000 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 3148660 3153244 3148660 ID=MS.gene012558
chr8.4 mRNA 3148660 3153244 3148660 ID=MS.gene012558.t1;Parent=MS.gene012558
chr8.4 exon 3148660 3148873 3148660 ID=MS.gene012558.t1.exon1;Parent=MS.gene012558.t1
chr8.4 CDS 3148660 3148873 3148660 ID=cds.MS.gene012558.t1;Parent=MS.gene012558.t1
chr8.4 exon 3148964 3149016 3148964 ID=MS.gene012558.t1.exon2;Parent=MS.gene012558.t1
chr8.4 CDS 3148964 3149016 3148964 ID=cds.MS.gene012558.t1;Parent=MS.gene012558.t1
chr8.4 exon 3150053 3150765 3150053 ID=MS.gene012558.t1.exon3;Parent=MS.gene012558.t1
chr8.4 CDS 3150053 3150765 3150053 ID=cds.MS.gene012558.t1;Parent=MS.gene012558.t1
chr8.4 exon 3150882 3151040 3150882 ID=MS.gene012558.t1.exon4;Parent=MS.gene012558.t1
chr8.4 CDS 3150882 3151040 3150882 ID=cds.MS.gene012558.t1;Parent=MS.gene012558.t1
chr8.4 exon 3152827 3153244 3152827 ID=MS.gene012558.t1.exon5;Parent=MS.gene012558.t1
chr8.4 CDS 3152827 3153244 3152827 ID=cds.MS.gene012558.t1;Parent=MS.gene012558.t1
Gene Sequence

>MS.gene012558

ATGGCTGAGCATCGCGTCTCCGAAGCTCTCCCTGTGGGACCCACTCAGCTTCTCCCAGAACAACAAAAAGCTCAAGAGATAAAAAAGGAACCAGTCGGCGAATCACCGTCAGCCACCGAGTCGCAGAAAAGTGAATTACCGAGTTCTAATGAAAATTCGAATTCAGAAACCCTAATTGCTTTTCCATCTTTGGTTTTGGATCAACGTAGTTTCGGTACGCCTCAATTTCCACTCTGTTTATCCTTTTTCAGCAACAAAAAAAAAATTAAGAAAAAAATTGTGAATTGTTTGGTTGATTTCACAGATGTGCAAGGAATCCCTAATACGCTGAATTCGGTTGTCAAATCCGAAATTAAGGTTAGATAATTTATTGTACCAAATTTTAACTTTATTACCGTGTTATTTTATTGAAACAGATTTTAGTTAAACGTGCGATCGTTCAATTTTTTGTGAATTTTTTATATAGAATTTTTAATTTTTAGTTTTTTTATTGCATACTTTGCTTGATCATTTGCAGTAGTTGCTGGTTTAGGGCATGGTTATAATTGGGGAATTCGACCTTGAAAAGTTTGTTTGATTAGGGTTTTTGAATGTAATACCCTTATGTGGAAACTGTGTAGCTTTCACTGAAAATTTTGAAACAAATTAATTACTCTCCTTTTTGTTCTGAATCTGAGAATAAGGCAGTAGTACTGTTAGTTTCTGCTTTATAGATTATGAATTTGGAATCTGGATTGAAAATGATTGTTAAATGCTTCTATTTTTGGTAGGGTTTAGGACTTAGTTATTATAGGAAAAGACTTACCGAGTCTCCTGTTTCGATTTTCGGTCTATTTAAGCCTTAGAAGCTTCAGCTTAATCATGAACTTAAATTTTGACTGATCCCATAAAAAGGAGGAATGAATTTACTTAAATTTTGAAAGAAAACGAGATGCAATGACCAGGCTCTCTGGCTACAAAGTGATCCAAAATCGCATAAAAGTTGAATCACTTGATGTGTTTAATGATAGACCATATCCAAAATTGAGACTTCAAGTTTTATGTAACTCATTTATGATCTTCGTGAAGATTCTTAGGATTCTTTTTTCCCAGTAGCTTAAATGCTGAATTCTGAATTTTAACACTGGCATATGATGTACAAATGAAATGTCTATCCGGTAGCGCATTTATTAGTACAAAATCTACAGGTTTCAATTGACAGAGATATACATTTCTTGAGTTTTCATCTAACAAATTAGGTTTTTATAGTAATATTTGATTGCTTTTCTTGAATGAACAATTCCCAAGACAAGACAGTATTTCTTCATTCAAATTAAGCATAAAAAAATTGTATGTTATGTACATCCCAAGGTATTTGATTTCTTTAGCACTAAATAGGCCATTTCATGCTCAGGAAACGGTTGGACCTCTTGAAAATGAAAAGGAAGTTGCTAAAAGAGAAGCTGTCCAGGAACCTTCAGCTCAGGCCGAAGAGCAGCTTCAAGTGACTGTGTCTTCAAATCCACCATCTGAACTATCACCAAATTCTGTTACAAAATCTTTATCATCCGTTCCTAGTCCAACCATACAAATACAGAATATGTCTCCTCCAATCGTTAGTAATACGCCTGTGGCAGAAGTAAACAAAAAAAGTACTTCTGGCGGTAGAGCCTTGTCTTCTGTTTCTGTTCCAAGGACACCATCATCTGATGGATTCAACTGGCGGAAATATGGGCAGAAGCAAGTTAAGAGTCCTACTACAGGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAGTTCCATTAGGGAAAGTAAGTTTGCGCCCTCCAACGAACCGACTGCAGAGAACAGTGTTTTAGTGAAGCCTGTCAATGCTCCGAAAGATTCTGATCCATCCACATCTTCCAAAGCTCAAGAAGAAACACCTTGCAGTTCTGACAAGAAACCACAAAACTCATCTGATATCAATGGTAATGGTAAAATAGTTTTGAACGAGGAACATGTCGACGAGCCAGATCCAAAACGAAGGCAAGTCCGCGTATGAAATCATATTATTTATCAGCAAAGCTTAAACAATAAGCCCATTTATTTTAATTGTGGCAGGATATAATGATTTATGTTCTCTCATTTAATTTGATAACCAGAAAGGAGAAAGGTGACTTGGTTCACTCAGATTCTTCTGTAAAACCTGAAAAGAAACCCAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCTGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGGTAAAGGTCTTTATCCACAAGCCAAGTATGCATAATTTCTGTTTCCTTTGGTTATTATTTATTTTGTTCTTGATATGAATCGAATTTGTTGCATTGATGAATCAGTATCTTTAGTTGAATATTATGAAAGTTGAGTTTAGGTGTAAACAGTGTTCAATTTTTTAAAATAAATAAAAAATATAAAGTCCAATAAAAAAGTTGCAAGCTGCATTTATTTATTGTAAGCAGTTTGAAAAATGACAAGGCCAAGATCTTATTCAAGCTGGTGCCTTTTTTGCTTTCTTTTCTACTTAAGTGACTTTTTAAAATATTGTTCATAAATTTATATGGATGGATATTCACTTACATTGAGAGTAATTTTTGTCACAATTAAATTAAATTTTATCAATTAAGTTGCTGAATATTGTCATATTATCTTAGGGATTATGCACACCAAATTCTAGATAAATTTGACTTGTGTAGTTATTTTATAGTTGACATTTATTTTTATTTCACAAATATATCATGCCTTAAGTTTAATTTATTTGATTAAGTATCAAATATCTTTTGAATTTTATGAAATTTGTAAACTAGATAAATGAAGCTTGCAACTTTTTATTTTTGAAGGCACTTGTATTTTGTGCATGTTTATATTTGGCTTATTTTATGCTTAGAATGTGTCTAAAATAGAGATGTTGCTAAGAGAGCTATTATCTATAAAGCTGTTATTTTTTTAAAGTTAAGCTAAAACAAATATGGACAGAGTGTTAAATTAATACATGAAAGGTTTAGACAAATTACTATAGCCTATAGGTCAGCTTATGAAACAAGAGGCTAAGATAAGTTGGTAAATATTATGTTTAACTTAGACCAATAAGTGGCGGAGCATGGATGATAGTATATAAATGTTAAGGAATATATAAATGTAAGTATATTGGACAAATAATGTGTAATTTGTATCGTGGTGTTAATTAATGAAAAGTTTTAGATAAATTACTATAGCCTATTGGTTAAATTGTGAAACAAGAGGCCTAGGTAAGTTGGTAAATATTGTGTTAAACTGAGACCAGTAGAGGGGGTCAATTTTTTATGGAATATACATGTAAATATGTCACACAAATAACGTGTAGCTTGTATCGTGGTATAGTGGTTTAATCCACTTGTTTCTTACTTTGAAATACGGGGTTCGAATCTTGGGCCTACCATTGGTATAGTGGTTTAATCCACATGTTTCTTACTTTGAATTCCGGGGTTCCAATCTTGGGCCTACCATGTTTCCTCAAGAAAATACACTGGAAAGGCAAAAATGCGCTTAAAAGGAATCGACTCCAAGTCCCCGTCCTCCTTGCAAAACTAGCTTAGCAACTAGACTACCGTAAACTTCTATGAATGTAACCATATGATGTGTTGATGTTAGACATTCGCACATGCTGAACATCGGACACATCCACATCCTTAATTCGAGGCGTCGGTGCTACATGGATAGAATAAAAAACTTGGGGGAGCCGTGACTTCCATCTGTACCTCAAAAGATCCGTTACTGACCACCGAAACATGTCTGTTTCCATCCCTTGTTCTACAAAATGTATCTATCCATCATGGTAGTATTATGTATCCATGGAAACAGAACTGTATCTTCAAGAAAATGTATCCGGACAAAATTATTTGCCAAACTGATTTTTCGGCTTTTTTTTCTTCCTGTTTATATGAATGATATTAAAGCTCACTTTTTTCCTTTTACGGATTGTTGGTTTTCTTTTTAAGTTTTCTTTAATTTTCCATTGAATTTTTTTCCTTTTCTTATCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCACATTGAGACTGCCGTAGACAACTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCGAAGAAACGACACGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAATAATTTGCTGTGCCCACCAAGTGCTCCTCTTGTGGCTGATGCAGCACCTGCCTCCATGAATAATTTGCAGTTGAGTAAACCGGACTCGCCACAAAATCAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTAACCGGGGAAGCCAAGGACCTTGGGGGTGAGAAAGCAATAGAGTCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATCAAGCCTTGCTGA
Protein sequence

>MS.gene012558.t1

MAEHRVSEALPVGPTQLLPEQQKAQEIKKEPVGESPSATESQKSELPSSNENSNSETLIAFPSLVLDQRSFDVQGIPNTLNSVVKSEIKETVGPLENEKEVAKREAVQEPSAQAEEQLQVTVSSNPPSELSPNSVTKSLSSVPSPTIQIQNMSPPIVSNTPVAEVNKKSTSGGRALSSVSVPRTPSSDGFNWRKYGQKQVKSPTTGSRSYYRCTQSNCCAKKIECWDHSGHVIETVYKSEHSHDPPRKISSIRESKFAPSNEPTAENSVLVKPVNAPKDSDPSTSSKAQEETPCSSDKKPQNSSDINGNGKIVLNEEHVDEPDPKRRKEKGDLVHSDSSVKPEKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMNNLLCPPSAPLVADAAPASMNNLQLSKPDSPQNQKISTQWSVDTEGELTGEAKDLGGEKAIESARTLLSIGFEIKPC