AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012560.t1 MTR_4g130900 93.373 498 32 1 1 498 1 497 0.0 905
MS.gene012560.t1 MTR_3g056100 37.576 330 167 11 115 425 12 321 1.66e-51 182
MS.gene012560.t1 MTR_3g056100 43.388 242 117 7 186 425 242 465 1.02e-50 182
MS.gene012560.t1 MTR_7g011820 40.136 294 133 8 185 455 226 499 1.41e-50 181
MS.gene012560.t1 MTR_3g056100 36.842 342 166 12 115 425 12 334 9.26e-50 177
MS.gene012560.t1 MTR_5g094430 37.175 269 155 5 156 422 36 292 2.70e-49 175
MS.gene012560.t1 MTR_5g094430 53.731 67 30 1 359 425 65 130 6.76e-15 77.0
MS.gene012560.t1 MTR_3g056100 36.842 342 166 12 115 425 156 478 4.55e-49 178
MS.gene012560.t1 MTR_5g094430 37.175 269 155 5 156 422 58 314 5.54e-49 175
MS.gene012560.t1 MTR_5g094430 53.731 67 30 1 359 425 87 152 6.78e-15 77.4
MS.gene012560.t1 MTR_5g094430 37.175 269 155 5 156 422 170 426 7.33e-49 177
MS.gene012560.t1 MTR_5g094430 53.731 67 30 1 359 425 199 264 4.61e-15 78.2
MS.gene012560.t1 MTR_5g042920 40.000 250 137 7 177 422 142 382 2.72e-48 173
MS.gene012560.t1 MTR_5g042920 54.688 64 28 1 361 424 152 214 1.10e-15 79.7
MS.gene012560.t1 MTR_4g082580 37.261 314 140 11 111 422 82 340 1.03e-46 167
MS.gene012560.t1 MTR_4g082580 44.444 90 44 2 335 423 124 208 9.72e-13 70.1
MS.gene012560.t1 MTR_7g080020 38.652 282 123 7 186 422 279 555 1.00e-44 168
MS.gene012560.t1 MTR_7g080020 44.898 98 52 2 343 440 264 359 6.18e-16 81.3
MS.gene012560.t1 MTR_3g031220 39.526 253 129 5 179 422 190 427 3.27e-44 163
MS.gene012560.t1 MTR_3g031220 52.239 67 31 1 359 425 197 262 9.57e-16 80.1
MS.gene012560.t1 MTR_3g009470 35.986 289 137 7 179 422 272 557 3.42e-44 166
MS.gene012560.t1 MTR_3g009470 49.333 75 33 2 356 426 272 345 6.25e-16 81.3
MS.gene012560.t1 MTR_5g074400 39.286 252 127 6 186 422 242 482 1.41e-43 163
MS.gene012560.t1 MTR_7g100510 35.341 249 156 3 174 420 176 421 4.67e-43 159
MS.gene012560.t1 MTR_7g100510 47.368 76 39 1 359 434 188 262 3.12e-17 84.3
MS.gene012560.t1 MTR_7g080000 37.594 266 129 7 188 422 235 494 2.35e-42 161
MS.gene012560.t1 MTR_7g071120 38.710 248 123 7 186 426 165 390 4.64e-42 157
MS.gene012560.t1 MTR_4g013260 34.137 249 141 4 175 422 172 398 5.82e-38 145
MS.gene012560.t1 MTR_5g097490 36.596 235 132 5 188 420 93 312 2.67e-37 142
MS.gene012560.t1 MTR_3g009470 33.198 247 117 7 179 380 272 515 2.12e-26 112
MS.gene012560.t1 MTR_3g009470 49.333 75 33 2 356 426 272 345 3.19e-16 81.6
MS.gene012560.t1 MTR_3g031220 36.019 211 111 5 179 380 190 385 7.39e-25 106
MS.gene012560.t1 MTR_3g031220 52.239 67 31 1 359 425 197 262 3.38e-16 80.9
MS.gene012560.t1 MTR_5g097500 30.833 240 124 7 188 419 84 289 1.31e-23 101
MS.gene012560.t1 MTR_1g015140 51.316 76 37 0 341 416 83 158 1.14e-21 92.0
MS.gene012560.t1 MTR_2g033820 41.818 110 55 2 343 447 186 291 2.88e-21 95.9
MS.gene012560.t1 MTR_1g077780 39.655 116 62 2 305 419 13 121 7.91e-21 89.4
MS.gene012560.t1 MTR_4g094412 50.000 80 39 1 342 420 216 295 2.05e-20 94.4
MS.gene012560.t1 MTR_4g094412 50.000 80 39 1 342 420 225 304 2.13e-20 94.4
MS.gene012560.t1 MTR_3g104750 52.857 70 33 0 347 416 91 160 3.11e-20 88.2
MS.gene012560.t1 MTR_1g086790 41.489 94 55 0 326 419 124 217 4.89e-20 91.7
MS.gene012560.t1 MTR_4g094588 44.231 104 49 2 346 449 164 258 6.69e-20 91.3
MS.gene012560.t1 MTR_4g107970 50.000 80 39 1 342 420 160 239 6.94e-20 93.2
MS.gene012560.t1 MTR_8g007270 47.945 73 38 0 344 416 138 210 9.02e-20 88.6
MS.gene012560.t1 MTR_4g107970 50.000 80 39 1 342 420 237 316 1.28e-19 92.8
MS.gene012560.t1 MTR_7g109800 38.679 106 65 0 315 420 100 205 1.53e-19 89.7
MS.gene012560.t1 MTR_8g092010 46.250 80 43 0 341 420 89 168 2.13e-19 86.3
MS.gene012560.t1 MTR_7g110720 49.367 79 39 1 342 419 171 249 2.76e-19 90.5
MS.gene012560.t1 MTR_3g095080 47.945 73 38 0 344 416 152 224 2.99e-19 87.4
MS.gene012560.t1 MTR_4g094908 57.895 57 23 1 361 416 267 323 3.37e-19 89.4
MS.gene012560.t1 MTR_4g132430 49.351 77 38 1 344 419 111 187 3.46e-19 89.7
MS.gene012560.t1 MTR_3g095080 47.945 73 38 0 344 416 128 200 3.53e-19 86.7
MS.gene012560.t1 MTR_7g110720 49.367 79 39 1 342 419 198 276 3.70e-19 90.5
MS.gene012560.t1 MTR_3g053330 39.623 106 55 2 344 448 235 332 7.85e-19 89.7
MS.gene012560.t1 MTR_2g045360 30.481 187 117 4 300 482 148 325 8.56e-19 89.4
MS.gene012560.t1 MTR_2g023930 48.052 77 39 1 344 419 289 365 1.15e-18 89.4
MS.gene012560.t1 MTR_4g132430 49.367 79 37 2 344 421 245 321 1.42e-18 89.0
MS.gene012560.t1 MTR_7g009730 48.750 80 40 1 338 416 197 276 1.85e-18 89.0
MS.gene012560.t1 MTR_7g028415 48.000 75 37 1 348 422 81 153 2.56e-18 82.8
MS.gene012560.t1 MTR_7g028710 48.000 75 37 1 348 422 81 153 2.56e-18 82.8
MS.gene012560.t1 MTR_7g062220 47.368 76 39 1 341 416 106 180 3.49e-18 85.9
MS.gene012560.t1 MTR_8g096730 46.154 78 40 1 345 422 55 130 3.79e-18 81.6
MS.gene012560.t1 MTR_5g016610 57.895 57 23 1 361 416 200 256 3.97e-18 84.7
MS.gene012560.t1 MTR_3g095040 33.077 130 84 2 292 420 51 178 3.97e-18 83.2
MS.gene012560.t1 MTR_2g088000 49.351 77 38 1 344 419 333 409 4.02e-18 87.8
MS.gene012560.t1 MTR_5g043880 43.158 95 46 1 324 418 96 182 5.78e-18 84.7
MS.gene012560.t1 MTR_7g079010 44.737 76 42 0 341 416 122 197 6.01e-18 83.2
MS.gene012560.t1 MTR_8g092140 47.297 74 38 1 344 416 143 216 6.85e-18 83.6
MS.gene012560.t1 MTR_5g091390 46.667 75 40 0 346 420 143 217 8.98e-18 84.7
MS.gene012560.t1 MTR_1g099600 43.373 83 45 2 341 422 167 248 3.81e-17 82.8
MS.gene012560.t1 MTR_1g009613 56.140 57 24 1 361 416 263 319 5.36e-17 82.8
MS.gene012560.t1 MTR_1g070455 56.140 57 24 1 361 416 294 350 7.93e-17 82.4
MS.gene012560.t1 MTR_4g122530 54.545 66 30 0 355 420 203 268 1.07e-16 82.8
MS.gene012560.t1 MTR_4g049790 33.103 145 81 5 345 473 297 441 1.37e-16 83.2
MS.gene012560.t1 MTR_4g127040 53.333 60 27 1 358 416 243 302 1.81e-16 80.9
MS.gene012560.t1 MTR_4g007060 37.391 115 57 4 348 458 115 218 3.81e-16 79.3
MS.gene012560.t1 MTR_3g106060 40.506 79 45 2 340 416 117 195 4.30e-16 79.3
MS.gene012560.t1 MTR_4g007060 37.391 115 57 4 348 458 149 252 5.80e-16 79.3
MS.gene012560.t1 MTR_2g083870 48.485 66 33 1 361 425 81 146 8.75e-16 77.8
MS.gene012560.t1 MTR_6g086555 50.769 65 31 1 361 424 207 271 2.07e-15 78.6
MS.gene012560.t1 MTR_4g049760 40.000 95 56 1 330 423 260 354 2.48e-15 79.0
MS.gene012560.t1 MTR_7g109600 46.154 65 34 1 357 420 50 114 3.18e-15 76.3
MS.gene012560.t1 MTR_8g087000 52.381 63 29 1 361 422 78 140 3.60e-15 75.9
MS.gene012560.t1 MTR_8g087000 52.381 63 29 1 361 422 77 139 3.97e-15 75.5
MS.gene012560.t1 MTR_3g108960 52.459 61 28 1 358 417 312 372 6.01e-15 77.0
MS.gene012560.t1 MTR_1g013760 49.123 57 28 1 361 416 141 197 1.06e-14 75.1
MS.gene012560.t1 MTR_2g105060 42.466 73 41 1 348 419 82 154 1.11e-14 74.3
MS.gene012560.t1 MTR_2g105060 47.619 63 32 1 358 419 167 229 1.63e-14 75.1
MS.gene012560.t1 MTR_0117s0040 51.613 62 29 1 358 418 72 133 1.73e-14 73.6
MS.gene012560.t1 MTR_2g024350 46.875 64 33 1 361 423 9 72 4.06e-14 72.4
MS.gene012560.t1 MTR_8g028565 40.000 95 50 3 335 424 126 218 7.22e-14 73.2
MS.gene012560.t1 MTR_1g013790 44.444 63 34 1 358 419 99 161 7.60e-14 72.0
MS.gene012560.t1 MTR_2g016770 46.032 63 33 1 361 422 36 98 8.41e-14 71.2
MS.gene012560.t1 MTR_2g016770 46.032 63 33 1 361 422 28 90 1.20e-13 70.5
MS.gene012560.t1 MTR_1g078260 42.308 78 44 1 347 423 234 311 2.07e-13 72.8
MS.gene012560.t1 MTR_7g079040 46.970 66 34 1 358 422 152 217 2.11e-13 71.6
MS.gene012560.t1 MTR_2g032030 46.269 67 33 2 361 426 268 332 3.93e-13 71.6
MS.gene012560.t1 MTR_8g069935 36.842 95 46 3 326 419 310 391 3.96e-13 72.0
MS.gene012560.t1 MTR_2g032030 46.269 67 33 2 361 426 268 332 4.01e-13 72.0
MS.gene012560.t1 MTR_8g067635 44.444 72 39 1 349 419 338 409 4.62e-13 72.0
MS.gene012560.t1 MTR_8g067650 47.619 63 32 1 358 419 337 399 5.33e-13 71.6
MS.gene012560.t1 MTR_2g024380 46.875 64 33 1 361 423 252 315 6.29e-13 71.2
MS.gene012560.t1 MTR_8g098945 38.000 100 49 4 357 453 126 215 7.31e-13 69.3
MS.gene012560.t1 MTR_5g067680 47.368 57 27 1 361 414 203 259 1.54e-11 66.2
MS.gene012560.t1 MTR_6g053200 37.879 66 40 1 358 422 328 393 1.96e-11 66.6
MS.gene012560.t1 MTR_5g044695 55.556 45 20 0 344 388 61 105 5.44e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012560.t1 AT4G30935 48.692 497 199 16 28 518 20 466 5.73e-125 374
MS.gene012560.t1 AT2G03340 34.000 350 192 10 92 422 148 477 2.61e-50 180
MS.gene012560.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene012560.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene012560.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene012560.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene012560.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene012560.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene012560.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene012560.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene012560.t1 AT1G13960 38.683 243 140 4 185 419 74 315 8.77e-48 169
MS.gene012560.t1 AT4G26640 36.149 296 154 6 141 422 97 371 9.71e-48 172
MS.gene012560.t1 AT4G26640 52.239 67 31 1 358 424 137 202 1.03e-14 77.0
MS.gene012560.t1 AT4G26640 36.149 296 154 6 141 422 129 403 1.20e-47 173
MS.gene012560.t1 AT4G26640 52.239 67 31 1 358 424 169 234 9.49e-15 77.4
MS.gene012560.t1 AT4G26640 36.149 296 154 6 141 422 169 443 1.77e-47 173
MS.gene012560.t1 AT4G26640 52.239 67 31 1 358 424 209 274 9.43e-15 77.4
MS.gene012560.t1 AT1G13960 34.132 334 200 9 94 419 147 468 2.48e-47 172
MS.gene012560.t1 AT2G38470 38.583 254 123 5 188 422 185 424 3.78e-45 166
MS.gene012560.t1 AT4G26440 38.202 267 128 8 185 422 176 434 5.25e-45 167
MS.gene012560.t1 AT4G26440 45.714 70 37 1 361 430 179 247 3.02e-13 72.8
MS.gene012560.t1 AT5G07100 41.152 243 83 9 186 427 116 299 1.47e-43 157
MS.gene012560.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene012560.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene012560.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene012560.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene012560.t1 AT2G04880 35.650 331 165 11 122 419 27 342 4.54e-43 159
MS.gene012560.t1 AT2G04880 33.815 346 175 11 122 419 27 366 3.71e-40 152
MS.gene012560.t1 AT2G04880 50.000 60 29 1 361 420 112 170 2.66e-12 69.3
MS.gene012560.t1 AT3G01080 35.443 237 115 5 185 419 165 365 3.26e-36 139
MS.gene012560.t1 AT3G01080 46.753 77 40 1 361 437 168 243 1.09e-14 76.6
MS.gene012560.t1 AT3G01080 35.443 237 115 5 185 419 203 403 3.53e-36 140
MS.gene012560.t1 AT3G01080 46.753 77 40 1 361 437 206 281 9.21e-15 77.0
MS.gene012560.t1 AT2G30250 35.124 242 140 4 186 424 165 392 1.51e-35 137
MS.gene012560.t1 AT2G30250 49.315 73 36 1 359 431 165 236 3.40e-12 68.6
MS.gene012560.t1 AT2G37260 37.743 257 119 9 186 416 84 325 9.24e-34 131
MS.gene012560.t1 AT2G37260 37.743 257 119 9 186 416 82 323 1.14e-33 130
MS.gene012560.t1 AT2G37260 37.743 257 119 9 186 416 164 405 1.68e-33 132
MS.gene012560.t1 AT5G56270 51.020 98 48 0 325 422 452 549 1.31e-26 114
MS.gene012560.t1 AT5G56270 51.515 66 31 1 361 426 274 338 3.47e-15 79.0
MS.gene012560.t1 AT5G56270 32.800 125 81 2 131 253 217 340 1.95e-12 70.5
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 6.91e-24 107
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.70e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 6.91e-24 107
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.76e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 7.05e-24 107
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.17e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 7.31e-24 106
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.07e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 8.70e-24 106
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.71e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 8.70e-24 106
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.71e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.01e-24 106
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.86e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.14e-24 106
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.11e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.14e-24 106
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.11e-12 69.3
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 401 594 9.98e-24 106
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 402 459 6.63e-12 68.9
MS.gene012560.t1 AT4G12020 34.328 201 118 5 187 380 468 661 1.89e-23 105
MS.gene012560.t1 AT4G12020 49.153 59 29 1 361 419 469 526 8.52e-12 68.6
MS.gene012560.t1 AT1G55600 45.679 81 44 0 339 419 286 366 1.59e-20 95.1
MS.gene012560.t1 AT5G49520 42.105 95 54 1 344 437 205 299 2.36e-20 93.6
MS.gene012560.t1 AT5G41570 47.368 76 40 0 341 416 79 154 2.77e-20 89.0
MS.gene012560.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene012560.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene012560.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene012560.t1 AT5G26170 54.839 62 28 0 355 416 108 169 1.14e-19 87.0
MS.gene012560.t1 AT2G23320 61.404 57 21 1 361 416 241 297 1.33e-19 90.1
MS.gene012560.t1 AT2G44745 43.023 86 49 0 331 416 116 201 1.69e-19 87.8
MS.gene012560.t1 AT5G13080 47.368 76 38 1 347 422 54 127 1.83e-19 85.5
MS.gene012560.t1 AT4G04450 43.689 103 49 3 344 445 182 276 2.59e-19 90.9
MS.gene012560.t1 AT5G15130 39.823 113 63 2 344 455 169 277 3.36e-19 90.9
MS.gene012560.t1 AT1G68150 47.619 84 43 1 338 420 213 296 3.66e-19 89.7
MS.gene012560.t1 AT5G15130 39.823 113 63 2 344 455 211 319 4.10e-19 90.9
MS.gene012560.t1 AT1G64000 48.571 70 36 0 347 416 101 170 4.69e-19 85.9
MS.gene012560.t1 AT2G24570 50.000 78 38 1 361 437 244 321 4.88e-19 88.6
MS.gene012560.t1 AT4G04450 43.689 103 49 3 344 445 276 370 6.40e-19 90.1
MS.gene012560.t1 AT4G18170 44.828 87 46 1 340 426 152 236 8.54e-19 87.8
MS.gene012560.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene012560.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene012560.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene012560.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene012560.t1 AT3G01970 48.571 70 36 0 347 416 52 121 1.11e-18 83.2
MS.gene012560.t1 AT4G24240 56.667 60 25 1 358 416 279 338 1.53e-18 87.8
MS.gene012560.t1 AT4G39410 49.315 73 37 0 344 416 207 279 1.64e-18 86.7
MS.gene012560.t1 AT4G01720 49.367 79 39 1 342 419 221 299 3.23e-18 87.8
MS.gene012560.t1 AT1G62300 49.367 79 37 2 344 421 296 372 3.66e-18 88.2
MS.gene012560.t1 AT3G04670 57.895 57 23 1 361 416 263 319 4.55e-18 85.9
MS.gene012560.t1 AT4G31550 58.621 58 23 1 361 417 247 304 5.35e-18 85.5
MS.gene012560.t1 AT4G31550 58.621 58 23 1 361 417 246 303 5.38e-18 85.5
MS.gene012560.t1 AT5G28650 57.895 57 23 1 361 416 263 319 9.84e-18 84.7
MS.gene012560.t1 AT5G43290 51.613 62 30 0 357 418 111 172 1.08e-17 83.6
MS.gene012560.t1 AT5G46350 38.739 111 55 4 361 468 184 284 1.16e-17 84.7
MS.gene012560.t1 AT2G47260 52.381 63 30 0 361 423 175 237 1.32e-17 84.7
MS.gene012560.t1 AT1G29860 46.988 83 40 2 361 441 137 217 1.83e-17 83.2
MS.gene012560.t1 AT5G64810 49.206 63 32 0 356 418 106 168 1.85e-17 81.3
MS.gene012560.t1 AT2G46130 46.053 76 41 0 341 416 11 86 2.27e-17 78.2
MS.gene012560.t1 AT3G62340 47.436 78 41 0 343 420 101 178 1.33e-16 80.5
MS.gene012560.t1 AT1G29280 48.529 68 34 1 354 420 68 135 5.34e-16 78.6
MS.gene012560.t1 AT1G18860 46.835 79 39 2 344 421 223 299 9.70e-16 80.5
MS.gene012560.t1 AT2G30590 52.632 57 26 1 361 416 314 370 1.33e-15 79.0
MS.gene012560.t1 AT1G69310 40.816 98 48 2 344 441 131 218 1.95e-15 77.4
MS.gene012560.t1 AT2G21900 49.153 59 30 0 361 419 110 168 3.48e-15 74.7
MS.gene012560.t1 AT3G01080 46.753 77 40 1 361 437 206 281 4.40e-15 77.0
MS.gene012560.t1 AT4G31800 45.000 60 32 1 361 419 112 171 1.52e-14 73.9
MS.gene012560.t1 AT5G52830 50.000 64 31 1 358 420 163 226 1.79e-14 75.1
MS.gene012560.t1 AT4G23550 29.814 161 86 3 263 422 69 203 1.85e-14 74.7
MS.gene012560.t1 AT4G31800 45.000 60 32 1 361 419 177 236 1.97e-14 74.7
MS.gene012560.t1 AT4G01250 45.000 80 40 3 347 425 116 192 4.24e-14 73.6
MS.gene012560.t1 AT2G25000 45.000 60 32 1 361 419 104 163 5.63e-14 72.0
MS.gene012560.t1 AT2G25000 45.000 60 32 1 361 419 104 163 5.63e-14 72.0
MS.gene012560.t1 AT1G80840 38.356 73 44 1 348 419 134 206 6.65e-14 73.2
MS.gene012560.t1 AT1G69810 45.570 79 41 2 344 420 129 207 8.31e-14 73.2
MS.gene012560.t1 AT1G69810 45.570 79 41 2 344 420 187 265 8.70e-14 73.6
MS.gene012560.t1 AT2G25000 45.000 60 32 1 361 419 126 185 1.24e-13 71.2
MS.gene012560.t1 AT2G25000 45.000 60 32 1 361 419 147 206 1.36e-13 71.6
MS.gene012560.t1 AT3G58710 47.761 67 34 1 354 419 65 131 1.57e-13 71.2
MS.gene012560.t1 AT2G34830 43.421 76 39 3 352 426 208 280 1.62e-13 73.2
MS.gene012560.t1 AT3G58710 47.761 67 34 1 354 419 64 130 1.64e-13 71.2
MS.gene012560.t1 AT2G34830 43.421 76 39 3 352 426 217 289 1.71e-13 72.8
MS.gene012560.t1 AT1G30650 43.056 72 39 2 352 422 210 280 9.74e-13 70.5
MS.gene012560.t1 AT2G46130 42.105 76 40 1 341 416 11 82 1.54e-12 64.3
MS.gene012560.t1 AT5G45050 45.588 68 34 2 359 425 1040 1105 3.02e-11 67.0
MS.gene012560.t1 AT5G45050 45.588 68 34 2 359 425 1179 1244 3.10e-11 67.0
MS.gene012560.t1 AT5G45050 45.588 68 34 2 359 425 1151 1216 3.11e-11 66.6

Find 130 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACCGAATTCAGCGTATT+AGG 0.178386 8.4:-3034892 None:intergenic
GGATTCAACTGGCGGAAATA+TGG 0.214937 8.4:+3036264 MS.gene012560:CDS
CCAAAGATGGAAAAGCAATT+AGG 0.223190 8.4:-3034744 None:intergenic
GGTTGTCAAATCCGAAATTA+AGG 0.234424 8.4:+3034909 MS.gene012560:CDS
ACGCGGACTTGCCTTCGTTT+TGG 0.267382 8.4:-3036669 None:intergenic
CAACCGAATTCAGCGTATTA+GGG 0.297461 8.4:-3034891 None:intergenic
CAAAGATGGAAAAGCAATTA+GGG 0.304686 8.4:-3034743 None:intergenic
AAATTATCTAACCTTAATTT+CGG 0.308223 8.4:-3034920 None:intergenic
CCGGGGAAGCCAAGGACCTT+GGG 0.325495 8.4:+3039070 MS.gene012560:CDS
CGGCCTGAGCTGAAGGTTCC+TGG 0.331309 8.4:-3036020 None:intergenic
GGATACCGATGGCGCAAGTA+TGG 0.334207 8.4:+3036899 MS.gene012560:CDS
AGGTGTTTCTTCTTGAGCTT+TGG 0.353643 8.4:-3036556 None:intergenic
CGCAAACTTACTTTCCCTAA+TGG 0.358180 8.4:-3036451 None:intergenic
GCGCAAGTATGGACAGAAAA+TGG 0.361245 8.4:+3036910 MS.gene012560:CDS
ACTCAACTGCAAATTATTCA+TGG 0.361645 8.4:-3038980 None:intergenic
GCAGGAGATGTGGGGATATC+TGG 0.371320 8.4:+3036872 MS.gene012560:CDS
CAGGTTCTCGAAGCTATTAC+AGG 0.382750 8.4:+3036313 MS.gene012560:CDS
ACGGAAGATTAGTTCCATTA+GGG 0.383627 8.4:+3036437 MS.gene012560:CDS
ATTGAATGCTGGGATCATTC+AGG 0.394765 8.4:+3036366 MS.gene012560:CDS
AGACATATTCTGTATTTGTA+TGG 0.407890 8.4:-3036136 None:intergenic
CACGGAAGATTAGTTCCATT+AGG 0.408040 8.4:+3036436 MS.gene012560:CDS
TGCTGCATGTACAACAAACT+TGG 0.409694 8.4:-3036852 None:intergenic
CCATCAGATGATGGTGTCCT+TGG 0.410812 8.4:-3036243 None:intergenic
CCCAAGGTCCTTGGCTTCCC+CGG 0.414124 8.4:-3039070 None:intergenic
GGTGGGCCGTGTCGTTTCTT+CGG 0.415960 8.4:-3038862 None:intergenic
TTCTTGAGCTTTGGAAGATG+TGG 0.417147 8.4:-3036547 None:intergenic
GTCTCAATGTGCTTTCGAAC+AGG 0.417742 8.4:-3038772 None:intergenic
TGGGCACAGCAAATTATTCA+TGG 0.422354 8.4:-3038920 None:intergenic
TGTCTTCTGTTTCTGTTCCA+AGG 0.425869 8.4:+3036226 MS.gene012560:CDS
ACCGGGGAAGCCAAGGACCT+TGG 0.430810 8.4:+3039069 MS.gene012560:CDS
AATCCCTAATACGCTGAATT+CGG 0.433253 8.4:+3034888 MS.gene012560:CDS
CTCTGCAGTCGGTTCGTTGG+AGG 0.433498 8.4:-3036475 None:intergenic
ATCAGAAAATTTCTACTCAA+TGG 0.437791 8.4:+3039022 MS.gene012560:CDS
GGTGCTGCAGCAGCCACAAG+AGG 0.441768 8.4:-3038892 None:intergenic
ATATTCTGTATTTGTATGGT+TGG 0.451171 8.4:-3036132 None:intergenic
TTCCCCGGTTAGTTCTCCTT+CGG 0.452841 8.4:-3039055 None:intergenic
TACTACAGATGCACTTCTGC+TGG 0.452929 8.4:+3038745 MS.gene012560:CDS
GTGGATGGATCAGAATCTTT+CGG 0.455352 8.4:-3036528 None:intergenic
CCGTGTCGTTTCTTCGGCAC+AGG 0.460742 8.4:-3038856 None:intergenic
TGCTAAAAGAGAAGCTGTCC+AGG 0.461739 8.4:+3036002 MS.gene012560:CDS
GATTCAACTGGCGGAAATAT+GGG 0.464037 8.4:+3036265 MS.gene012560:CDS
TCTGTCCATACTTGCGCCAT+CGG 0.468804 8.4:-3036904 None:intergenic
CGTTGATCCAAAACCAAAGA+TGG 0.472386 8.4:-3034757 None:intergenic
AGAAGCTGAGTGGGTCCCAC+AGG 0.472843 8.4:-3034604 None:intergenic
TGCTCTTCGGCCTGAGCTGA+AGG 0.475117 8.4:-3036027 None:intergenic
TAATTTGCAGTTGAGTAAAC+CGG 0.477622 8.4:+3038987 MS.gene012560:CDS
GTTCTCTGCAGTCGGTTCGT+TGG 0.479965 8.4:-3036478 None:intergenic
GAATCTTTCGGAGCATTGAC+AGG 0.481035 8.4:-3036516 None:intergenic
TGTATTTGTATGGTTGGACT+AGG 0.483789 8.4:-3036126 None:intergenic
TCATCTGATATCAATGGTAA+TGG 0.485405 8.4:+3036606 MS.gene012560:CDS
GACACCGAAGGAGAACTAAC+CGG 0.487157 8.4:+3039051 MS.gene012560:CDS
GCTGACGGTGATTCGCCGAC+TGG 0.493066 8.4:-3034664 None:intergenic
TGTCCAGGAACCTTCAGCTC+AGG 0.494745 8.4:+3036017 MS.gene012560:CDS
AAAGACCTTTACCTGGGATG+TGG 0.496114 8.4:-3036944 None:intergenic
TCTGCAGTCGGTTCGTTGGA+GGG 0.497315 8.4:-3036474 None:intergenic
TGCTAAGAAGATTGAATGCT+GGG 0.499049 8.4:+3036356 MS.gene012560:CDS
CATCATCTGATGGATTCAAC+TGG 0.499437 8.4:+3036253 MS.gene012560:CDS
CCCACCAAGTGCTCCTCTTG+TGG 0.499953 8.4:+3038939 MS.gene012560:CDS
TGCTGTCATCATAACTTACA+AGG 0.506337 8.4:+3038813 MS.gene012560:CDS
AAGTTTGTTGTACATGCAGC+AGG 0.506685 8.4:+3036854 MS.gene012560:CDS
GTCTCCGAAGCTCTCCCTGT+GGG 0.511729 8.4:+3034589 MS.gene012560:CDS
CAGAAAGGAGAAAGGTGACT+TGG 0.514032 8.4:+3036793 MS.gene012560:intron
CCCACCAAGTGCTCCTCTTG+TGG 0.523692 8.4:+3038879 MS.gene012560:CDS
ACACCGAAGGAGAACTAACC+GGG 0.523728 8.4:+3039052 MS.gene012560:CDS
GGGTCCCACAGGGAGAGCTT+CGG 0.524421 8.4:-3034593 None:intergenic
CAAAACTCATCTGATATCAA+TGG 0.525848 8.4:+3036600 MS.gene012560:CDS
TGGACCTCTTGAAAATGAAA+AGG 0.527268 8.4:+3035975 MS.gene012560:CDS
TGCAAATTATTCATGGAGGC+AGG 0.533719 8.4:-3038973 None:intergenic
AGCAAATTATTCATGGAGGC+AGG 0.536158 8.4:-3038913 None:intergenic
GCCACAAGAGGAGCACTTGG+TGG 0.539995 8.4:-3038880 None:intergenic
GCTCGAACGCTTCTGAGCAT+AGG 0.544980 8.4:+3039114 MS.gene012560:CDS
TTTGGTGATAGTTCAGATGG+TGG 0.547468 8.4:-3036075 None:intergenic
TTTCATGCTCAGGAAACGGT+TGG 0.552316 8.4:+3035955 MS.gene012560:intron
TTCTGCGACTCGGTGGCTGA+CGG 0.553411 8.4:-3034679 None:intergenic
GAATTTGGTGATAGTTCAGA+TGG 0.554364 8.4:-3036078 None:intergenic
AGAACTAACCGGGGAAGCCA+AGG 0.555363 8.4:+3039062 MS.gene012560:CDS
GCCACAAGAGGAGCACTTGG+TGG 0.560730 8.4:-3038940 None:intergenic
TAATGGAACTAATCTTCCGT+GGG 0.563190 8.4:-3036434 None:intergenic
TAGCTTCGAGAACCTGTAGT+AGG 0.565059 8.4:-3036306 None:intergenic
CGGGGAAGCCAAGGACCTTG+GGG 0.569355 8.4:+3039071 MS.gene012560:CDS
GCAGCCACAAGAGGAGCACT+TGG 0.569920 8.4:-3038883 None:intergenic
CCACAAGAGGAGCACTTGGT+GGG 0.571996 8.4:-3038939 None:intergenic
GACAGCATCTGAGTTGTCTA+CGG 0.572444 8.4:-3038797 None:intergenic
CCAAGGACACCATCATCTGA+TGG 0.573655 8.4:+3036243 MS.gene012560:CDS
CAGTTGAATCCATCAGATGA+TGG 0.574887 8.4:-3036252 None:intergenic
CAAGTTAAGAGTCCTACTAC+AGG 0.575076 8.4:+3036294 MS.gene012560:CDS
AAGACCTTTACCTGGGATGT+GGG 0.577183 8.4:-3036943 None:intergenic
TGTTCTGGGAGAAGCTGAGT+GGG 0.577794 8.4:-3034613 None:intergenic
GTTGATTTCACAGATGTGCA+AGG 0.578017 8.4:+3034865 MS.gene012560:intron
TGAGCTTTGGAAGATGTGGA+TGG 0.579447 8.4:-3036543 None:intergenic
GCTGCATGTACAACAAACTT+GGG 0.581848 8.4:-3036851 None:intergenic
TTGATAACCAGAAAGGAGAA+AGG 0.582120 8.4:+3036785 MS.gene012560:intron
TTGTATGGTTGGACTAGGAA+CGG 0.583444 8.4:-3036121 None:intergenic
CCACAAGAGGAGCACTTGGT+GGG 0.590936 8.4:-3038879 None:intergenic
AGTCACTTGAAGCTGCTCTT+CGG 0.591198 8.4:-3036040 None:intergenic
GGTGCTGCATCAGCCACAAG+AGG 0.591740 8.4:-3038952 None:intergenic
GTGCTAAGAAGATTGAATGC+TGG 0.592242 8.4:+3036355 MS.gene012560:CDS
CTAATGGAACTAATCTTCCG+TGG 0.592547 8.4:-3036435 None:intergenic
GGAGACGCGATGCTCAGCCA+TGG 0.594531 8.4:-3034572 None:intergenic
GGCGTATTACTAACGATTGG+AGG 0.596429 8.4:-3036159 None:intergenic
GATGTGGGGATATCTGGTGA+TGG 0.598874 8.4:+3036878 MS.gene012560:CDS
TCAGCCACAAGAGGAGCACT+TGG 0.605078 8.4:-3038943 None:intergenic
GTACATGCAGCAGGAGATGT+GGG 0.608887 8.4:+3036863 MS.gene012560:CDS
TGAAGGGTAACCCACATCCC+AGG 0.609054 8.4:+3036933 MS.gene012560:CDS
ACAGGCGTATTACTAACGAT+TGG 0.613651 8.4:-3036162 None:intergenic
AAAACACTGTTCTCTGCAGT+CGG 0.615994 8.4:-3036486 None:intergenic
GTATGGACAGAAAATGGTGA+AGG 0.618010 8.4:+3036916 MS.gene012560:CDS
CATCTGATGGATTCAACTGG+CGG 0.620518 8.4:+3036256 MS.gene012560:CDS
TATGGACAGAAAATGGTGAA+GGG 0.621435 8.4:+3036917 MS.gene012560:CDS
GGTTTCTTGTCAGAACTGCA+AGG 0.624573 8.4:-3036576 None:intergenic
TCTGAATGATGAATTCAGCA+AGG 0.627601 8.4:-3039150 None:intergenic
CGTCTCCGAAGCTCTCCCTG+TGG 0.630117 8.4:+3034588 MS.gene012560:CDS
GGGGAAGCCAAGGACCTTGG+GGG 0.641628 8.4:+3039072 MS.gene012560:CDS
TGGAACAGAAACAGAAGACA+AGG 0.643346 8.4:-3036223 None:intergenic
AATTTCTACTCAATGGTCAG+TGG 0.645416 8.4:+3039029 MS.gene012560:CDS
TTGTTCTGGGAGAAGCTGAG+TGG 0.645709 8.4:-3034614 None:intergenic
CAATGGTCAGTGGACACCGA+AGG 0.651277 8.4:+3039039 MS.gene012560:CDS
TGTACATGCAGCAGGAGATG+TGG 0.652491 8.4:+3036862 MS.gene012560:CDS
GAAGCTGAGTGGGTCCCACA+GGG 0.663562 8.4:-3034603 None:intergenic
GCTGTCATCATAACTTACAA+GGG 0.670071 8.4:+3038814 MS.gene012560:CDS
AATCGTTAGTAATACGCCTG+TGG 0.690746 8.4:+3036164 MS.gene012560:CDS
TACATGCAGCAGGAGATGTG+GGG 0.691459 8.4:+3036864 MS.gene012560:CDS
ACGAGCCAGATCCAAAACGA+AGG 0.695030 8.4:+3036658 MS.gene012560:CDS
TATCTGGTGATGGATACCGA+TGG 0.698652 8.4:+3036888 MS.gene012560:CDS
CCTGTGCCGAAGAAACGACA+CGG 0.708728 8.4:+3038856 MS.gene012560:CDS
ATGGAACTAATCTTCCGTGG+GGG 0.722546 8.4:-3036432 None:intergenic
CAACTGCAAATTATTCATGG+AGG 0.726603 8.4:-3038977 None:intergenic
AATGGAACTAATCTTCCGTG+GGG 0.732859 8.4:-3036433 None:intergenic
CACCGAAGGAGAACTAACCG+GGG 0.738224 8.4:+3039053 MS.gene012560:CDS
GCACAGCAAATTATTCATGG+AGG 0.739037 8.4:-3038917 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAATAAATTAAACTTA+AGG - chr8.4:3037465-3037484 None:intergenic 10.0%
!! ATATATAAATGTAAGTATAT+TGG + chr8.4:3037849-3037868 MS.gene012560:intron 10.0%
!! ATATTGTTCATAAATTTATA+TGG + chr8.4:3037262-3037281 MS.gene012560:intron 10.0%
!! AAATTATCTAACCTTAATTT+CGG - chr8.4:3034923-3034942 None:intergenic 15.0%
!! AATATTGTCATATTATCTTA+GGG + chr8.4:3037354-3037373 MS.gene012560:intron 15.0%
!! ACAAAATAAATAATAACCAA+AGG - chr8.4:3037002-3037021 None:intergenic 15.0%
!! ATGATAGTATATAAATGTTA+AGG + chr8.4:3037825-3037844 MS.gene012560:intron 15.0%
!! TTAATATCATTCATATAAAC+AGG - chr8.4:3038634-3038653 None:intergenic 15.0%
!! AAATAATATGATTTCATACG+CGG - chr8.4:3036689-3036708 None:intergenic 20.0%
!! AAGTTAAGCTAAAACAAATA+TGG + chr8.4:3037670-3037689 MS.gene012560:intron 20.0%
!! ACGGTAATAAAGTTAAAATT+TGG - chr8.4:3034952-3034971 None:intergenic 20.0%
!! AGAAAAGGAAAAAAATTCAA+TGG - chr8.4:3038715-3038734 None:intergenic 20.0%
!! ATATTATGAAAGTTGAGTTT+AGG + chr8.4:3037073-3037092 MS.gene012560:intron 20.0%
!! ATGGATAGAATAAAAAACTT+GGG + chr8.4:3038412-3038431 MS.gene012560:intron 20.0%
!! GAAAAAAATTGTGAATTGTT+TGG + chr8.4:3034843-3034862 MS.gene012560:intron 20.0%
!! GAATATTGTCATATTATCTT+AGG + chr8.4:3037353-3037372 MS.gene012560:intron 20.0%
!! GTGTTAAATTAATACATGAA+AGG + chr8.4:3037698-3037717 MS.gene012560:intron 20.0%
!! TCTGTTTCAATAAAATAACA+CGG - chr8.4:3034971-3034990 None:intergenic 20.0%
!! TGCTTTATAGATTATGAATT+TGG + chr8.4:3035277-3035296 MS.gene012560:intron 20.0%
!! TGTTCATAAATTTATATGGA+TGG + chr8.4:3037266-3037285 MS.gene012560:intron 20.0%
!! TTTATTAGTACAAAATCTAC+AGG + chr8.4:3035739-3035758 MS.gene012560:intron 20.0%
!!! AAAGATTTTGTAACAGAATT+TGG - chr8.4:3036096-3036115 None:intergenic 20.0%
!!! AGTCAAATTTATCTAGAATT+TGG - chr8.4:3037390-3037409 None:intergenic 20.0%
!!! ATTTAATTTGATAACCAGAA+AGG + chr8.4:3036778-3036797 MS.gene012560:intron 20.0%
!!! ATTTTGTGCATGTTTATATT+TGG + chr8.4:3037569-3037588 MS.gene012560:intron 20.0%
!!! TTGAAAAGTTTGTTTGATTA+GGG + chr8.4:3035134-3035153 MS.gene012560:intron 20.0%
!!! TTGCAACTTTTTATTTTTGA+AGG + chr8.4:3037539-3037558 MS.gene012560:intron 20.0%
!!! TTGTTAAATGCTTCTATTTT+TGG + chr8.4:3035318-3035337 MS.gene012560:intron 20.0%
!!! TTGTTTCTTACTTTGAAATA+CGG + chr8.4:3038094-3038113 MS.gene012560:intron 20.0%
!!! TTTTTTTTTGTTGCTGAAAA+AGG - chr8.4:3034818-3034837 None:intergenic 20.0%
! AAAAGCTCAAGAGATAAAAA+AGG + chr8.4:3034639-3034658 MS.gene012560:CDS 25.0%
! AAACAGAAATTATGCATACT+TGG - chr8.4:3036979-3036998 None:intergenic 25.0%
! AATTCAAAGTAAGAAACATG+TGG - chr8.4:3038160-3038179 None:intergenic 25.0%
! AGACATATTCTGTATTTGTA+TGG - chr8.4:3036139-3036158 None:intergenic 25.0%
! AGTAGAAAAGAAAGCAAAAA+AGG - chr8.4:3037226-3037245 None:intergenic 25.0%
! ATATTCTGTATTTGTATGGT+TGG - chr8.4:3036135-3036154 None:intergenic 25.0%
! ATCAGAAAATTTCTACTCAA+TGG + chr8.4:3039022-3039041 MS.gene012560:CDS 25.0%
! ATGTTTCTTACTTTGAATTC+CGG + chr8.4:3038161-3038180 MS.gene012560:intron 25.0%
! ATTTCAAAGTAAGAAACAAG+TGG - chr8.4:3038093-3038112 None:intergenic 25.0%
! CATGGATAGAATAAAAAACT+TGG + chr8.4:3038411-3038430 MS.gene012560:intron 25.0%
! CTAAAGAAATCAAATACCTT+GGG - chr8.4:3035921-3035940 None:intergenic 25.0%
! CTGCCACAATTAAAATAAAT+GGG - chr8.4:3036735-3036754 None:intergenic 25.0%
! GATAAATTACTATAGCCTAT+TGG + chr8.4:3037921-3037940 MS.gene012560:intron 25.0%
! GTTACATTCATAGAAGTTTA+CGG - chr8.4:3038310-3038329 None:intergenic 25.0%
! TAGTAGTTTCTGATAAGAAA+AGG - chr8.4:3038730-3038749 None:intergenic 25.0%
! TGATTTCTTTAGCACTAAAT+AGG + chr8.4:3035929-3035948 MS.gene012560:intron 25.0%
! TGGATAGAATAAAAAACTTG+GGG + chr8.4:3038413-3038432 MS.gene012560:intron 25.0%
! TGTTTCACAATTTAACCAAT+AGG - chr8.4:3037939-3037958 None:intergenic 25.0%
!! AAAACTTGAAGTCTCAATTT+TGG - chr8.4:3035594-3035613 None:intergenic 25.0%
!! AAATTCATTCCTCCTTTTTA+TGG - chr8.4:3035461-3035480 None:intergenic 25.0%
!! AATTCATTCCTCCTTTTTAT+GGG - chr8.4:3035460-3035479 None:intergenic 25.0%
!! AGATACATTTTGTAGAACAA+GGG - chr8.4:3038505-3038524 None:intergenic 25.0%
!! ATAATGTGTAATTTGTATCG+TGG + chr8.4:3037876-3037895 MS.gene012560:intron 25.0%
!! ATTCAACTTTTATGCGATTT+TGG - chr8.4:3035542-3035561 None:intergenic 25.0%
!! CTAATCAAACAAACTTTTCA+AGG - chr8.4:3035135-3035154 None:intergenic 25.0%
!! CTTGAAAAGTTTGTTTGATT+AGG + chr8.4:3035133-3035152 MS.gene012560:intron 25.0%
!! GAGTTTTCATCTAACAAATT+AGG + chr8.4:3035790-3035809 MS.gene012560:intron 25.0%
!! GTAGAAATTTTCTGATTTTG+TGG - chr8.4:3039018-3039037 None:intergenic 25.0%
!! GTTTAGGACTTAGTTATTAT+AGG + chr8.4:3035345-3035364 MS.gene012560:intron 25.0%
!! TAGATACATTTTGTAGAACA+AGG - chr8.4:3038506-3038525 None:intergenic 25.0%
!! TAGATTATGAATTTGGAATC+TGG + chr8.4:3035284-3035303 MS.gene012560:intron 25.0%
!! TTCGAATTTTCATTAGAACT+CGG - chr8.4:3034715-3034734 None:intergenic 25.0%
!!! AAATGCTTCTATTTTTGGTA+GGG + chr8.4:3035323-3035342 MS.gene012560:intron 25.0%
!!! AAGCCCATTTATTTTAATTG+TGG + chr8.4:3036729-3036748 MS.gene012560:intron 25.0%
!!! GTAAACAAAAAAAGTACTTC+TGG + chr8.4:3036192-3036211 MS.gene012560:CDS 25.0%
!!! TAAATGCTTCTATTTTTGGT+AGG + chr8.4:3035322-3035341 MS.gene012560:intron 25.0%
!!! TATTTGCCAAACTGATTTTT+CGG + chr8.4:3038596-3038615 MS.gene012560:intron 25.0%
!!! TGAATTCTGAATTTTAACAC+TGG + chr8.4:3035678-3035697 MS.gene012560:intron 25.0%
!!! TGTTTCTTACTTTGAAATAC+GGG + chr8.4:3038095-3038114 MS.gene012560:intron 25.0%
AAAAAGCCGAAAAATCAGTT+TGG - chr8.4:3038605-3038624 None:intergenic 30.0%
AAGAAATACTGTCTTGTCTT+GGG - chr8.4:3035858-3035877 None:intergenic 30.0%
AAGCAGTTTGAAAAATGACA+AGG + chr8.4:3037177-3037196 MS.gene012560:intron 30.0%
AATTCAGCATTTAAGCTACT+GGG - chr8.4:3035664-3035683 None:intergenic 30.0%
ACTCAACTGCAAATTATTCA+TGG - chr8.4:3038983-3039002 None:intergenic 30.0%
ATGGTAGTATTATGTATCCA+TGG + chr8.4:3038532-3038551 MS.gene012560:intron 30.0%
CAAAACTCATCTGATATCAA+TGG + chr8.4:3036600-3036619 MS.gene012560:CDS 30.0%
CAAAATGTATCTATCCATCA+TGG + chr8.4:3038513-3038532 MS.gene012560:intron 30.0%
CAAAGATGGAAAAGCAATTA+GGG - chr8.4:3034746-3034765 None:intergenic 30.0%
CAATATTTACCAACTTACCT+AGG - chr8.4:3037967-3037986 None:intergenic 30.0%
CCTGCCACAATTAAAATAAA+TGG - chr8.4:3036736-3036755 None:intergenic 30.0%
GACAAATTACTATAGCCTAT+AGG + chr8.4:3037725-3037744 MS.gene012560:intron 30.0%
GATACATAATACTACCATGA+TGG - chr8.4:3038530-3038549 None:intergenic 30.0%
GCTAAAGAAATCAAATACCT+TGG - chr8.4:3035922-3035941 None:intergenic 30.0%
GGATAGAATAAAAAACTTGG+GGG + chr8.4:3038414-3038433 MS.gene012560:intron 30.0%
GTACAAATGAAATGTCTATC+CGG + chr8.4:3035709-3035728 MS.gene012560:intron 30.0%
TCATCTGATATCAATGGTAA+TGG + chr8.4:3036606-3036625 MS.gene012560:CDS 30.0%
TCTAACATCAACACATCATA+TGG - chr8.4:3038332-3038351 None:intergenic 30.0%
TGCATAATTTCTGTTTCCTT+TGG + chr8.4:3036983-3037002 MS.gene012560:intron 30.0%
TGGTTAAATTGTGAAACAAG+AGG + chr8.4:3037941-3037960 MS.gene012560:intron 30.0%
TGTTTCTTACTTTGAATTCC+GGG + chr8.4:3038162-3038181 MS.gene012560:intron 30.0%
TTCTCAGATTCAGAACAAAA+AGG - chr8.4:3035233-3035252 None:intergenic 30.0%
TTGAATGTAATACCCTTATG+TGG + chr8.4:3035160-3035179 MS.gene012560:intron 30.0%
! GTTTAACTTAGACCAATAAG+TGG + chr8.4:3037792-3037811 MS.gene012560:intron 30.0%
! GTTTGGCAAATAATTTTGTC+CGG - chr8.4:3038588-3038607 None:intergenic 30.0%
! TAATTTGCAGTTGAGTAAAC+CGG + chr8.4:3038987-3039006 MS.gene012560:CDS 30.0%
! TGAAGTCTCAATTTTGGATA+TGG - chr8.4:3035588-3035607 None:intergenic 30.0%
! TGTATTTTCTTGAGGAAACA+TGG - chr8.4:3038206-3038225 None:intergenic 30.0%
! TTGATATCAGATGAGTTTTG+TGG - chr8.4:3036600-3036619 None:intergenic 30.0%
! TTGTTCTGAATCTGAGAATA+AGG + chr8.4:3035235-3035254 MS.gene012560:intron 30.0%
! TTTAGGGCATGGTTATAATT+GGG + chr8.4:3035101-3035120 MS.gene012560:intron 30.0%
!! AACAAAAAAAGTACTTCTGG+CGG + chr8.4:3036195-3036214 MS.gene012560:CDS 30.0%
!! ACTTCCTTTTCATTTTCAAG+AGG - chr8.4:3035982-3036001 None:intergenic 30.0%
!! GTTTCTTACTTTGAAATACG+GGG + chr8.4:3038096-3038115 MS.gene012560:intron 30.0%
!! TTTTGACTGATCCCATAAAA+AGG + chr8.4:3035446-3035465 MS.gene012560:intron 30.0%
!! TTTTTCCTTTTACGGATTGT+TGG + chr8.4:3038662-3038681 MS.gene012560:intron 30.0%
!!! AGCTCACTTTTTTCCTTTTA+CGG + chr8.4:3038654-3038673 MS.gene012560:intron 30.0%
!!! CCATTTATTTTAATTGTGGC+AGG + chr8.4:3036733-3036752 MS.gene012560:intron 30.0%
!!! TGGTAAAATAGTTTTGAACG+AGG + chr8.4:3036626-3036645 MS.gene012560:CDS 30.0%
!!! TTCTATTTTTGGTAGGGTTT+AGG + chr8.4:3035329-3035348 MS.gene012560:intron 30.0%
AACAAGAGGCTAAGATAAGT+TGG + chr8.4:3037759-3037778 MS.gene012560:intron 35.0%
AAGATACAGTTCTGTTTCCA+TGG - chr8.4:3038552-3038571 None:intergenic 35.0%
AAGGCAAAAATGCGCTTAAA+AGG + chr8.4:3038231-3038250 MS.gene012560:intron 35.0%
AATAGACCGAAAATCGAAAC+AGG - chr8.4:3035389-3035408 None:intergenic 35.0%
AATCCCTAATACGCTGAATT+CGG + chr8.4:3034888-3034907 MS.gene012560:CDS 35.0%
AATTTCTACTCAATGGTCAG+TGG + chr8.4:3039029-3039048 MS.gene012560:CDS 35.0%
CAACTGCAAATTATTCATGG+AGG - chr8.4:3038980-3038999 None:intergenic 35.0%
CCAAAGATGGAAAAGCAATT+AGG - chr8.4:3034747-3034766 None:intergenic 35.0%
CTCAAGAAAATACACTGGAA+AGG + chr8.4:3038212-3038231 MS.gene012560:intron 35.0%
CTGAAAAAGGATAAACAGAG+TGG - chr8.4:3034805-3034824 None:intergenic 35.0%
GAAAACCAACAATCCGTAAA+AGG - chr8.4:3038670-3038689 None:intergenic 35.0%
GAAGAAATACTGTCTTGTCT+TGG - chr8.4:3035859-3035878 None:intergenic 35.0%
GAATTCAGCATTTAAGCTAC+TGG - chr8.4:3035665-3035684 None:intergenic 35.0%
GAGATAAAAAAGGAACCAGT+CGG + chr8.4:3034649-3034668 MS.gene012560:CDS 35.0%
GATAAACAGAGTGGAAATTG+AGG - chr8.4:3034796-3034815 None:intergenic 35.0%
GCTGTCATCATAACTTACAA+GGG + chr8.4:3038814-3038833 MS.gene012560:CDS 35.0%
GGATTAAACCACTATACCAA+TGG - chr8.4:3038139-3038158 None:intergenic 35.0%
GGTTGTCAAATCCGAAATTA+AGG + chr8.4:3034909-3034928 MS.gene012560:CDS 35.0%
GTTTCCTCAAGAAAATACAC+TGG + chr8.4:3038207-3038226 MS.gene012560:intron 35.0%
GTTTCTTACTTTGAATTCCG+GGG + chr8.4:3038163-3038182 MS.gene012560:intron 35.0%
TAAACCACTATACCAATGGT+AGG - chr8.4:3038135-3038154 None:intergenic 35.0%
TAACTTAGACCAATAAGTGG+CGG + chr8.4:3037795-3037814 MS.gene012560:intron 35.0%
TAATGGAACTAATCTTCCGT+GGG - chr8.4:3036437-3036456 None:intergenic 35.0%
TATGGACAGAAAATGGTGAA+GGG + chr8.4:3036917-3036936 MS.gene012560:CDS 35.0%
TGATCTTCGTGAAGATTCTT+AGG + chr8.4:3035628-3035647 MS.gene012560:intron 35.0%
TGATTAAGCTGAAGCTTCTA+AGG - chr8.4:3035416-3035435 None:intergenic 35.0%
TGCTAAGAAGATTGAATGCT+GGG + chr8.4:3036356-3036375 MS.gene012560:CDS 35.0%
TGCTGTCATCATAACTTACA+AGG + chr8.4:3038813-3038832 MS.gene012560:CDS 35.0%
TGGACCTCTTGAAAATGAAA+AGG + chr8.4:3035975-3035994 MS.gene012560:CDS 35.0%
TGTACTAATAAATGCGCTAC+CGG - chr8.4:3035731-3035750 None:intergenic 35.0%
TGTATGTTATGTACATCCCA+AGG + chr8.4:3035902-3035921 MS.gene012560:intron 35.0%
TGTATTTGTATGGTTGGACT+AGG - chr8.4:3036129-3036148 None:intergenic 35.0%
TGTTTCATAAGCTGACCTAT+AGG - chr8.4:3037743-3037762 None:intergenic 35.0%
TTAGGGCATGGTTATAATTG+GGG + chr8.4:3035102-3035121 MS.gene012560:intron 35.0%
! AATTATGCATACTTGGCTTG+TGG - chr8.4:3036972-3036991 None:intergenic 35.0%
! ACAAACTTGGGTTTCTTTTC+AGG - chr8.4:3036842-3036861 None:intergenic 35.0%
! ACATTTTGTAGAACAAGGGA+TGG - chr8.4:3038501-3038520 None:intergenic 35.0%
! ACGGAAGATTAGTTCCATTA+GGG + chr8.4:3036437-3036456 MS.gene012560:CDS 35.0%
! CTTTCCAGTGTATTTTCTTG+AGG - chr8.4:3038214-3038233 None:intergenic 35.0%
! GAATTTGGTGATAGTTCAGA+TGG - chr8.4:3036081-3036100 None:intergenic 35.0%
! GTTTAGGGCATGGTTATAAT+TGG + chr8.4:3035100-3035119 MS.gene012560:intron 35.0%
! TTGATAACCAGAAAGGAGAA+AGG + chr8.4:3036785-3036804 MS.gene012560:intron 35.0%
! TTTTCTTGAGGAAACATGGT+AGG - chr8.4:3038202-3038221 None:intergenic 35.0%
!! CCTAATTGCTTTTCCATCTT+TGG + chr8.4:3034744-3034763 MS.gene012560:CDS 35.0%
!! GTTTTGGATCAACGTAGTTT+CGG + chr8.4:3034766-3034785 MS.gene012560:CDS 35.0%
!! TAATTCACTTTTCTGCGACT+CGG - chr8.4:3034692-3034711 None:intergenic 35.0%
!! TGCTTTTCCATCTTTGGTTT+TGG + chr8.4:3034750-3034769 MS.gene012560:CDS 35.0%
!! TTTTTGTTTACTTCTGCCAC+AGG - chr8.4:3036183-3036202 None:intergenic 35.0%
!!! CTTGAGCTTTTTGTTGTTCT+GGG - chr8.4:3034630-3034649 None:intergenic 35.0%
!!! GCAGCTTGCAACTTTTTTAT+TGG - chr8.4:3037144-3037163 None:intergenic 35.0%
!!! TAGAGGGGGTCAATTTTTTA+TGG + chr8.4:3038004-3038023 MS.gene012560:intron 35.0%
!!! TCTTGAGCTTTTTGTTGTTC+TGG - chr8.4:3034631-3034650 None:intergenic 35.0%
AAAAAATTGACCCCCTCTAC+TGG - chr8.4:3038003-3038022 None:intergenic 40.0%
AAAACACTGTTCTCTGCAGT+CGG - chr8.4:3036489-3036508 None:intergenic 40.0%
AAATACGGGGTTCGAATCTT+GGG + chr8.4:3038109-3038128 MS.gene012560:intron 40.0%
AAATAGGCCATTTCATGCTC+AGG + chr8.4:3035945-3035964 MS.gene012560:intron 40.0%
AATCGTTAGTAATACGCCTG+TGG + chr8.4:3036164-3036183 MS.gene012560:CDS 40.0%
AATGGAACTAATCTTCCGTG+GGG - chr8.4:3036436-3036455 None:intergenic 40.0%
AATTGTGAAACAAGAGGCCT+AGG + chr8.4:3037947-3037966 MS.gene012560:intron 40.0%
ACAACCGAATTCAGCGTATT+AGG - chr8.4:3034895-3034914 None:intergenic 40.0%
ACAGGCGTATTACTAACGAT+TGG - chr8.4:3036165-3036184 None:intergenic 40.0%
ACATCCACATCCTTAATTCG+AGG + chr8.4:3038377-3038396 MS.gene012560:intron 40.0%
AGCAAATTATTCATGGAGGC+AGG - chr8.4:3038916-3038935 None:intergenic 40.0%
AGCTACACAGTTTCCACATA+AGG - chr8.4:3035176-3035195 None:intergenic 40.0%
AGGTCAGCTTATGAAACAAG+AGG + chr8.4:3037745-3037764 MS.gene012560:intron 40.0%
AGGTGTTTCTTCTTGAGCTT+TGG - chr8.4:3036559-3036578 None:intergenic 40.0%
ATTGAATGCTGGGATCATTC+AGG + chr8.4:3036366-3036385 MS.gene012560:CDS 40.0%
CAACCGAATTCAGCGTATTA+GGG - chr8.4:3034894-3034913 None:intergenic 40.0%
CAAGTTAAGAGTCCTACTAC+AGG + chr8.4:3036294-3036313 MS.gene012560:CDS 40.0%
CACCAGCTTGAATAAGATCT+TGG - chr8.4:3037203-3037222 None:intergenic 40.0%
CAGTTGAATCCATCAGATGA+TGG - chr8.4:3036255-3036274 None:intergenic 40.0%
CGCAAACTTACTTTCCCTAA+TGG - chr8.4:3036454-3036473 None:intergenic 40.0%
CGTTGATCCAAAACCAAAGA+TGG - chr8.4:3034760-3034779 None:intergenic 40.0%
CTAATGGAACTAATCTTCCG+TGG - chr8.4:3036438-3036457 None:intergenic 40.0%
GATTCAACTGGCGGAAATAT+GGG + chr8.4:3036265-3036284 MS.gene012560:CDS 40.0%
GCACAGCAAATTATTCATGG+AGG - chr8.4:3038920-3038939 None:intergenic 40.0%
GCTACACAGTTTCCACATAA+GGG - chr8.4:3035175-3035194 None:intergenic 40.0%
GCTGCATGTACAACAAACTT+GGG - chr8.4:3036854-3036873 None:intergenic 40.0%
GGATGGAAACAGACATGTTT+CGG - chr8.4:3038484-3038503 None:intergenic 40.0%
GTATGGACAGAAAATGGTGA+AGG + chr8.4:3036916-3036935 MS.gene012560:CDS 40.0%
GTGCTAAGAAGATTGAATGC+TGG + chr8.4:3036355-3036374 MS.gene012560:CDS 40.0%
GTGGATAAAGACCTTTACCT+GGG - chr8.4:3036953-3036972 None:intergenic 40.0%
GTGGATGGATCAGAATCTTT+CGG - chr8.4:3036531-3036550 None:intergenic 40.0%
GTTAAACTGAGACCAGTAGA+GGG + chr8.4:3037988-3038007 MS.gene012560:intron 40.0%
TGACTGATCCCATAAAAAGG+AGG + chr8.4:3035449-3035468 MS.gene012560:intron 40.0%
TGATCATTTGCAGTAGTTGC+TGG + chr8.4:3035078-3035097 MS.gene012560:intron 40.0%
TGCAAATTATTCATGGAGGC+AGG - chr8.4:3038976-3038995 None:intergenic 40.0%
TGCTGCATGTACAACAAACT+TGG - chr8.4:3036855-3036874 None:intergenic 40.0%
TGGAACAGAAACAGAAGACA+AGG - chr8.4:3036226-3036245 None:intergenic 40.0%
TGGGCACAGCAAATTATTCA+TGG - chr8.4:3038923-3038942 None:intergenic 40.0%
TGTGGATAAAGACCTTTACC+TGG - chr8.4:3036954-3036973 None:intergenic 40.0%
TGTTAAACTGAGACCAGTAG+AGG + chr8.4:3037987-3038006 MS.gene012560:intron 40.0%
TTAAACTGAGACCAGTAGAG+GGG + chr8.4:3037989-3038008 MS.gene012560:intron 40.0%
! ATAACGTGTAGCTTGTATCG+TGG + chr8.4:3038053-3038072 MS.gene012560:intron 40.0%
! CACGGAAGATTAGTTCCATT+AGG + chr8.4:3036436-3036455 MS.gene012560:CDS 40.0%
! GAGTCTCCTGTTTCGATTTT+CGG + chr8.4:3035380-3035399 MS.gene012560:intron 40.0%
! GTTGATTTCACAGATGTGCA+AGG + chr8.4:3034865-3034884 MS.gene012560:intron 40.0%
! TAGCTTGTATCGTGGTATAG+TGG + chr8.4:3038061-3038080 MS.gene012560:intron 40.0%
! TTGTATGGTTGGACTAGGAA+CGG - chr8.4:3036124-3036143 None:intergenic 40.0%
! TTTGGTGATAGTTCAGATGG+TGG - chr8.4:3036078-3036097 None:intergenic 40.0%
!! AAGTTTGTTGTACATGCAGC+AGG + chr8.4:3036854-3036873 MS.gene012560:CDS 40.0%
!! CATCATCTGATGGATTCAAC+TGG + chr8.4:3036253-3036272 MS.gene012560:CDS 40.0%
!! TGTCTTCTGTTTCTGTTCCA+AGG + chr8.4:3036226-3036245 MS.gene012560:CDS 40.0%
!! TTCTTGAGCTTTGGAAGATG+TGG - chr8.4:3036550-3036569 None:intergenic 40.0%
!! TTGCAGTAGTTGCTGGTTTA+GGG + chr8.4:3035085-3035104 MS.gene012560:intron 40.0%
!! TTTGCAGTAGTTGCTGGTTT+AGG + chr8.4:3035084-3035103 MS.gene012560:intron 40.0%
!!! GTTGCTAAGCTAGTTTTGCA+AGG - chr8.4:3038280-3038299 None:intergenic 40.0%
AAACATGGTAGGCCCAAGAT+TGG - chr8.4:3038191-3038210 None:intergenic 45.0%
AAAGACCTTTACCTGGGATG+TGG - chr8.4:3036947-3036966 None:intergenic 45.0%
AACAAGAGGCCTAGGTAAGT+TGG + chr8.4:3037955-3037974 MS.gene012560:intron 45.0%
AAGACCTTTACCTGGGATGT+GGG - chr8.4:3036946-3036965 None:intergenic 45.0%
AATTCCGGGGTTCCAATCTT+GGG + chr8.4:3038176-3038195 MS.gene012560:intron 45.0%
ACATCCTTAATTCGAGGCGT+CGG + chr8.4:3038383-3038402 MS.gene012560:intron 45.0%
ACCGTTTCCTGAGCATGAAA+TGG - chr8.4:3035955-3035974 None:intergenic 45.0%
AGTCACTTGAAGCTGCTCTT+CGG - chr8.4:3036043-3036062 None:intergenic 45.0%
ATGGAACTAATCTTCCGTGG+GGG - chr8.4:3036435-3036454 None:intergenic 45.0%
CAAGTCACCTTTCTCCTTTC+TGG - chr8.4:3036795-3036814 None:intergenic 45.0%
CAGAAAGGAGAAAGGTGACT+TGG + chr8.4:3036793-3036812 MS.gene012560:intron 45.0%
CAGGTTCTCGAAGCTATTAC+AGG + chr8.4:3036313-3036332 MS.gene012560:CDS 45.0%
CATGTTTCGGTGGTCAGTAA+CGG - chr8.4:3038471-3038490 None:intergenic 45.0%
CATTCGCACATGCTGAACAT+CGG + chr8.4:3038352-3038371 MS.gene012560:intron 45.0%
GAAAACGAGATGCAATGACC+AGG + chr8.4:3035496-3035515 MS.gene012560:intron 45.0%
GAAATACGGGGTTCGAATCT+TGG + chr8.4:3038108-3038127 MS.gene012560:intron 45.0%
GACAGCATCTGAGTTGTCTA+CGG - chr8.4:3038800-3038819 None:intergenic 45.0%
GCCATTTCATGCTCAGGAAA+CGG + chr8.4:3035951-3035970 MS.gene012560:intron 45.0%
GCGCAAGTATGGACAGAAAA+TGG + chr8.4:3036910-3036929 MS.gene012560:CDS 45.0%
GGATTCAACTGGCGGAAATA+TGG + chr8.4:3036264-3036283 MS.gene012560:CDS 45.0%
GGCCAAGATCTTATTCAAGC+TGG + chr8.4:3037198-3037217 MS.gene012560:intron 45.0%
GGCGTATTACTAACGATTGG+AGG - chr8.4:3036162-3036181 None:intergenic 45.0%
GGTTTCTTGTCAGAACTGCA+AGG - chr8.4:3036579-3036598 None:intergenic 45.0%
GTCTCAATGTGCTTTCGAAC+AGG - chr8.4:3038775-3038794 None:intergenic 45.0%
TAAACTGAGACCAGTAGAGG+GGG + chr8.4:3037990-3038009 MS.gene012560:intron 45.0%
TACTACAGATGCACTTCTGC+TGG + chr8.4:3038745-3038764 MS.gene012560:CDS 45.0%
TAGCTTCGAGAACCTGTAGT+AGG - chr8.4:3036309-3036328 None:intergenic 45.0%
TGAGGTACAGATGGAAGTCA+CGG - chr8.4:3038442-3038461 None:intergenic 45.0%
TGCTAAAAGAGAAGCTGTCC+AGG + chr8.4:3036002-3036021 MS.gene012560:CDS 45.0%
TGGAAACAGACATGTTTCGG+TGG - chr8.4:3038481-3038500 None:intergenic 45.0%
TTTCATGCTCAGGAAACGGT+TGG + chr8.4:3035955-3035974 MS.gene012560:intron 45.0%
! TTCTGATTTTGTGGCGAGTC+CGG - chr8.4:3039009-3039028 None:intergenic 45.0%
!! ACTTGCCTTCGTTTTGGATC+TGG - chr8.4:3036666-3036685 None:intergenic 45.0%
!! CATCTGATGGATTCAACTGG+CGG + chr8.4:3036256-3036275 MS.gene012560:CDS 45.0%
!! GAATCTTTCGGAGCATTGAC+AGG - chr8.4:3036519-3036538 None:intergenic 45.0%
!! TATCTGGTGATGGATACCGA+TGG + chr8.4:3036888-3036907 MS.gene012560:CDS 45.0%
!! TGAGCTTTGGAAGATGTGGA+TGG - chr8.4:3036546-3036565 None:intergenic 45.0%
!!! AGCTAGTTTTGCAAGGAGGA+CGG - chr8.4:3038273-3038292 None:intergenic 45.0%
!!! CGGATCTTTTGAGGTACAGA+TGG - chr8.4:3038451-3038470 None:intergenic 45.0%
!!! GCTAAGCTAGTTTTGCAAGG+AGG - chr8.4:3038277-3038296 None:intergenic 45.0%
!!! GGTCAGTAACGGATCTTTTG+AGG - chr8.4:3038460-3038479 None:intergenic 45.0%
ACACCGAAGGAGAACTAACC+GGG + chr8.4:3039052-3039071 MS.gene012560:CDS 50.0%
ACGAGCCAGATCCAAAACGA+AGG + chr8.4:3036658-3036677 MS.gene012560:CDS 50.0%
ATCCATGCTCCGCCACTTAT+TGG - chr8.4:3037807-3037826 None:intergenic 50.0%
CCAAGGACACCATCATCTGA+TGG + chr8.4:3036243-3036262 MS.gene012560:CDS 50.0%
CTATTGCTTTCTCACCCCCA+AGG - chr8.4:3039089-3039108 None:intergenic 50.0%
GAATTCCGGGGTTCCAATCT+TGG + chr8.4:3038175-3038194 MS.gene012560:intron 50.0%
GACACCGAAGGAGAACTAAC+CGG + chr8.4:3039051-3039070 MS.gene012560:CDS 50.0%
GACGCCTCGAATTAAGGATG+TGG - chr8.4:3038384-3038403 None:intergenic 50.0%
GATGTGGGGATATCTGGTGA+TGG + chr8.4:3036878-3036897 MS.gene012560:CDS 50.0%
GTAACCCACATCCCAGGTAA+AGG + chr8.4:3036939-3036958 MS.gene012560:intron 50.0%
GTACATGCAGCAGGAGATGT+GGG + chr8.4:3036863-3036882 MS.gene012560:CDS 50.0%
TACATGCAGCAGGAGATGTG+GGG + chr8.4:3036864-3036883 MS.gene012560:CDS 50.0%
TCGAATCTTGGGCCTACCAT+TGG + chr8.4:3038120-3038139 MS.gene012560:intron 50.0%
TCTGTCCATACTTGCGCCAT+CGG - chr8.4:3036907-3036926 None:intergenic 50.0%
TGGGCCTACCATTGGTATAG+TGG + chr8.4:3038128-3038147 MS.gene012560:intron 50.0%
TGTACATGCAGCAGGAGATG+TGG + chr8.4:3036862-3036881 MS.gene012560:CDS 50.0%
! CCATCAGATGATGGTGTCCT+TGG - chr8.4:3036246-3036265 None:intergenic 50.0%
! TTCCCCGGTTAGTTCTCCTT+CGG - chr8.4:3039058-3039077 None:intergenic 50.0%
!! GTAGTTGCTGGTTTAGGGCA+TGG + chr8.4:3035090-3035109 MS.gene012560:intron 50.0%
!! TGTTCTGGGAGAAGCTGAGT+GGG - chr8.4:3034616-3034635 None:intergenic 50.0%
!! TTCACTTTTCTGCGACTCGG+TGG - chr8.4:3034689-3034708 None:intergenic 50.0%
!! TTGTTCTGGGAGAAGCTGAG+TGG - chr8.4:3034617-3034636 None:intergenic 50.0%
!!! CTAGTTTTGCAAGGAGGACG+GGG - chr8.4:3038271-3038290 None:intergenic 50.0%
!!! GCTAGTTTTGCAAGGAGGAC+GGG - chr8.4:3038272-3038291 None:intergenic 50.0%
AGAACTAACCGGGGAAGCCA+AGG + chr8.4:3039062-3039081 MS.gene012560:CDS 55.0%
AGCACAGTCATGATCCCCCA+CGG + chr8.4:3036418-3036437 MS.gene012560:CDS 55.0%
CAATGGTCAGTGGACACCGA+AGG + chr8.4:3039039-3039058 MS.gene012560:CDS 55.0%
CACCGAAGGAGAACTAACCG+GGG + chr8.4:3039053-3039072 MS.gene012560:CDS 55.0%
CACTTTGTAGCCAGAGAGCC+TGG - chr8.4:3035517-3035536 None:intergenic 55.0%
CCTGTGCCGAAGAAACGACA+CGG + chr8.4:3038856-3038875 MS.gene012560:CDS 55.0%
GATGCAATGACCAGGCTCTC+TGG + chr8.4:3035504-3035523 MS.gene012560:intron 55.0%
GCAGGAGATGTGGGGATATC+TGG + chr8.4:3036872-3036891 MS.gene012560:CDS 55.0%
GCTCGAACGCTTCTGAGCAT+AGG + chr8.4:3039114-3039133 MS.gene012560:CDS 55.0%
GGATACCGATGGCGCAAGTA+TGG + chr8.4:3036899-3036918 MS.gene012560:CDS 55.0%
TAGGCCCAAGATTGGAACCC+CGG - chr8.4:3038183-3038202 None:intergenic 55.0%
TGAAGGGTAACCCACATCCC+AGG + chr8.4:3036933-3036952 MS.gene012560:CDS 55.0%
TGTCCAGGAACCTTCAGCTC+AGG + chr8.4:3036017-3036036 MS.gene012560:CDS 55.0%
TTTCTCACCCCCAAGGTCCT+TGG - chr8.4:3039082-3039101 None:intergenic 55.0%
! ACGCGGACTTGCCTTCGTTT+TGG - chr8.4:3036672-3036691 None:intergenic 55.0%
! GACCAATAAGTGGCGGAGCA+TGG + chr8.4:3037802-3037821 MS.gene012560:intron 55.0%
!! AGCACCGACGCCTCGAATTA+AGG - chr8.4:3038390-3038409 None:intergenic 55.0%
!! CCACAAGAGGAGCACTTGGT+GGG - chr8.4:3038882-3038901 None:intergenic 55.0%
!! GTTCTCTGCAGTCGGTTCGT+TGG - chr8.4:3036481-3036500 None:intergenic 55.0%
!! TCAGCCACAAGAGGAGCACT+TGG - chr8.4:3038946-3038965 None:intergenic 55.0%
!! TCTGCAGTCGGTTCGTTGGA+GGG - chr8.4:3036477-3036496 None:intergenic 55.0%
AGAAGCTGAGTGGGTCCCAC+AGG - chr8.4:3034607-3034626 None:intergenic 60.0%
CCCACCAAGTGCTCCTCTTG+TGG + chr8.4:3038879-3038898 MS.gene012560:CDS 60.0%
GAAGCTGAGTGGGTCCCACA+GGG - chr8.4:3034606-3034625 None:intergenic 60.0%
GTCTCCGAAGCTCTCCCTGT+GGG + chr8.4:3034589-3034608 MS.gene012560:CDS 60.0%
TGCTCTTCGGCCTGAGCTGA+AGG - chr8.4:3036030-3036049 None:intergenic 60.0%
TTGCAAGGAGGACGGGGACT+TGG - chr8.4:3038265-3038284 None:intergenic 60.0%
! GGTGCTGCATCAGCCACAAG+AGG - chr8.4:3038955-3038974 None:intergenic 60.0%
!! CCGTGTCGTTTCTTCGGCAC+AGG - chr8.4:3038859-3038878 None:intergenic 60.0%
!! CTCTGCAGTCGGTTCGTTGG+AGG - chr8.4:3036478-3036497 None:intergenic 60.0%
!! GCAGCCACAAGAGGAGCACT+TGG - chr8.4:3038886-3038905 None:intergenic 60.0%
!! GCCACAAGAGGAGCACTTGG+TGG - chr8.4:3038883-3038902 None:intergenic 60.0%
!! GGTGGGCCGTGTCGTTTCTT+CGG - chr8.4:3038865-3038884 None:intergenic 60.0%
!! TTCGAGGCGTCGGTGCTACA+TGG + chr8.4:3038393-3038412 MS.gene012560:intron 60.0%
!! TTCTGCGACTCGGTGGCTGA+CGG - chr8.4:3034682-3034701 None:intergenic 60.0%
ACCGGGGAAGCCAAGGACCT+TGG + chr8.4:3039069-3039088 MS.gene012560:CDS 65.0%
CCCAAGGTCCTTGGCTTCCC+CGG - chr8.4:3039073-3039092 None:intergenic 65.0%
CCGGGGAAGCCAAGGACCTT+GGG + chr8.4:3039070-3039089 MS.gene012560:CDS 65.0%
CGGCCTGAGCTGAAGGTTCC+TGG - chr8.4:3036023-3036042 None:intergenic 65.0%
CGGGGAAGCCAAGGACCTTG+GGG + chr8.4:3039071-3039090 MS.gene012560:CDS 65.0%
CGTCTCCGAAGCTCTCCCTG+TGG + chr8.4:3034588-3034607 MS.gene012560:CDS 65.0%
GCTGACGGTGATTCGCCGAC+TGG - chr8.4:3034667-3034686 None:intergenic 65.0%
GGGGAAGCCAAGGACCTTGG+GGG + chr8.4:3039072-3039091 MS.gene012560:CDS 65.0%
GGGTCCCACAGGGAGAGCTT+CGG - chr8.4:3034596-3034615 None:intergenic 65.0%
! GGTGCTGCAGCAGCCACAAG+AGG - chr8.4:3038895-3038914 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 3034574 3039158 3034574 ID=MS.gene012560
chr8.4 mRNA 3034574 3039158 3034574 ID=MS.gene012560.t1;Parent=MS.gene012560
chr8.4 exon 3034574 3034787 3034574 ID=MS.gene012560.t1.exon1;Parent=MS.gene012560.t1
chr8.4 CDS 3034574 3034787 3034574 ID=cds.MS.gene012560.t1;Parent=MS.gene012560.t1
chr8.4 exon 3034878 3034930 3034878 ID=MS.gene012560.t1.exon2;Parent=MS.gene012560.t1
chr8.4 CDS 3034878 3034930 3034878 ID=cds.MS.gene012560.t1;Parent=MS.gene012560.t1
chr8.4 exon 3035967 3036679 3035967 ID=MS.gene012560.t1.exon3;Parent=MS.gene012560.t1
chr8.4 CDS 3035967 3036679 3035967 ID=cds.MS.gene012560.t1;Parent=MS.gene012560.t1
chr8.4 exon 3036796 3036954 3036796 ID=MS.gene012560.t1.exon4;Parent=MS.gene012560.t1
chr8.4 CDS 3036796 3036954 3036796 ID=cds.MS.gene012560.t1;Parent=MS.gene012560.t1
chr8.4 exon 3038741 3039158 3038741 ID=MS.gene012560.t1.exon5;Parent=MS.gene012560.t1
chr8.4 CDS 3038741 3039158 3038741 ID=cds.MS.gene012560.t1;Parent=MS.gene012560.t1
Gene Sequence

>MS.gene012560

ATGGCTGAGCATCGCGTCTCCGAAGCTCTCCCTGTGGGACCCACTCAGCTTCTCCCAGAACAACAAAAAGCTCAAGAGATAAAAAAGGAACCAGTCGGCGAATCACCGTCAGCCACCGAGTCGCAGAAAAGTGAATTACCGAGTTCTAATGAAAATTCGAATTCAGAAACCCTAATTGCTTTTCCATCTTTGGTTTTGGATCAACGTAGTTTCGGTACGCCTCAATTTCCACTCTGTTTATCCTTTTTCAGCAACAAAAAAAAAATTAAGAAAAAAATTGTGAATTGTTTGGTTGATTTCACAGATGTGCAAGGAATCCCTAATACGCTGAATTCGGTTGTCAAATCCGAAATTAAGGTTAGATAATTTATTGTACCAAATTTTAACTTTATTACCGTGTTATTTTATTGAAACAGATTTTAGTTAAACGTGCGATCGTTCAATTTTTTGTGAATTTTTTATATAGAATTTTTAATTTTTAGTTTTTTTATTGCATACTTTGCTTGATCATTTGCAGTAGTTGCTGGTTTAGGGCATGGTTATAATTGGGGAATTCGACCTTGAAAAGTTTGTTTGATTAGGGTTTTTGAATGTAATACCCTTATGTGGAAACTGTGTAGCTTTCACTGAAAATTTTGAAACAAATTAATTACTCTCCTTTTTGTTCTGAATCTGAGAATAAGGCAGTAGTACTGTTAGTTTCTGCTTTATAGATTATGAATTTGGAATCTGGATTGAAAATGATTGTTAAATGCTTCTATTTTTGGTAGGGTTTAGGACTTAGTTATTATAGGAAAAGACTTACTGAGTCTCCTGTTTCGATTTTCGGTCTATTTAAGCCTTAGAAGCTTCAGCTTAATCATGAACTTAAATTTTGACTGATCCCATAAAAAGGAGGAATGAATTTACTTAAATTTTGAAAGAAAACGAGATGCAATGACCAGGCTCTCTGGCTACAAAGTGATCCAAAATCGCATAAAAGTTGAATCACTTGATGTGTTTAATGATAGACCATATCCAAAATTGAGACTTCAAGTTTTATGTAACTCATTTATGATCTTCGTGAAGATTCTTAGGATTCTTTTTTCCCAGTAGCTTAAATGCTGAATTCTGAATTTTAACACTGGCATATGATGTACAAATGAAATGTCTATCCGGTAGCGCATTTATTAGTACAAAATCTACAGGTTTCAATTGACAGAGATATACATTTCTTGAGTTTTCATCTAACAAATTAGGTTTTTATAGTAATATTTGATTGCTTTTCTTGAATGAACAATTCCCAAGACAAGACAGTATTTCTTCATTCAAATTAAGCATAAAAAAATTGTATGTTATGTACATCCCAAGGTATTTGATTTCTTTAGCACTAAATAGGCCATTTCATGCTCAGGAAACGGTTGGACCTCTTGAAAATGAAAAGGAAGTTGCTAAAAGAGAAGCTGTCCAGGAACCTTCAGCTCAGGCCGAAGAGCAGCTTCAAGTGACTGTGTCTTCAAATCCACCATCTGAACTATCACCAAATTCTGTTACAAAATCTTTATCATCCGTTCCTAGTCCAACCATACAAATACAGAATATGTCTCCTCCAATCGTTAGTAATACGCCTGTGGCAGAAGTAAACAAAAAAAGTACTTCTGGCGGTAGAGCCTTGTCTTCTGTTTCTGTTCCAAGGACACCATCATCTGATGGATTCAACTGGCGGAAATATGGGCAGAAGCAAGTTAAGAGTCCTACTACAGGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAGTTCCATTAGGGAAAGTAAGTTTGCGCCCTCCAACGAACCGACTGCAGAGAACAGTGTTTTAGTGAAGCCTGTCAATGCTCCGAAAGATTCTGATCCATCCACATCTTCCAAAGCTCAAGAAGAAACACCTTGCAGTTCTGACAAGAAACCACAAAACTCATCTGATATCAATGGTAATGGTAAAATAGTTTTGAACGAGGAACATGTCGACGAGCCAGATCCAAAACGAAGGCAAGTCCGCGTATGAAATCATATTATTTATCAGCAAAGCTTAAACAATAAGCCCATTTATTTTAATTGTGGCAGGATATAATGATTTATGTTCTCTCATTTAATTTGATAACCAGAAAGGAGAAAGGTGACTTGGTTCACTCAGATTCTTCTGTAAAACCTGAAAAGAAACCCAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCTGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGGTAAAGGTCTTTATCCACAAGCCAAGTATGCATAATTTCTGTTTCCTTTGGTTATTATTTATTTTGTTCTTGATATGAATCGAATTTGTTGCATTGATGAATCAGTATCTTTAGTTGAATATTATGAAAGTTGAGTTTAGGTGTAAACAGTGTTCAATTTTTTAAAATAAATAAAAAATATAAAGTCCAATAAAAAAGTTGCAAGCTGCATTTATTTATTGTAAGCAGTTTGAAAAATGACAAGGCCAAGATCTTATTCAAGCTGGTGCCTTTTTTGCTTTCTTTTCTACTTAAGTGACTTTTTAAAATATTGTTCATAAATTTATATGGATGGATATTCACTTACATTGAGAGTAATTTTTGTCACAATTAAATTAAATTTTATCAATTAAGTTGCTGAATATTGTCATATTATCTTAGGGATTATGCACACCAAATTCTAGATAAATTTGACTTGTGTAGTTATTTTATAGTTGACATTTATTTTTATTTCACAAATATATCATGCCTTAAGTTTAATTTATTTGATTAAGTATCAAATATCTTTTGAATTTTATGAAATTTGTAAACTAGATAAATGAAGCTTGCAACTTTTTATTTTTGAAGGCACTTGTATTTTGTGCATGTTTATATTTGGCTTATTTTATGCTTAGAATGTGTCTAAAATAGAGATGTTGCTAAGAGAGCTATTATCTATAAAGCTGTTATTTTTTTAAAGTTAAGCTAAAACAAATATGGACAGAGTGTTAAATTAATACATGAAAGGTTTAGACAAATTACTATAGCCTATAGGTCAGCTTATGAAACAAGAGGCTAAGATAAGTTGGTAAATATTATGTTTAACTTAGACCAATAAGTGGCGGAGCATGGATGATAGTATATAAATGTTAAGGAATATATAAATGTAAGTATATTGGACAAATAATGTGTAATTTGTATCGTGGTGTTAATTAATGAAAAGTTTTAGATAAATTACTATAGCCTATTGGTTAAATTGTGAAACAAGAGGCCTAGGTAAGTTGGTAAATATTGTGTTAAACTGAGACCAGTAGAGGGGGTCAATTTTTTATGGAATATACATGTAAATATGTCACACAAATAACGTGTAGCTTGTATCGTGGTATAGTGGTTTAATCCACTTGTTTCTTACTTTGAAATACGGGGTTCGAATCTTGGGCCTACCATTGGTATAGTGGTTTAATCCACATGTTTCTTACTTTGAATTCCGGGGTTCCAATCTTGGGCCTACCATGTTTCCTCAAGAAAATACACTGGAAAGGCAAAAATGCGCTTAAAAGGAATCGACTCCAAGTCCCCGTCCTCCTTGCAAAACTAGCTTAGCAACTAGACTACCGTAAACTTCTATGAATGTAACCATATGATGTGTTGATGTTAGACATTCGCACATGCTGAACATCGGACACATCCACATCCTTAATTCGAGGCGTCGGTGCTACATGGATAGAATAAAAAACTTGGGGGAGCCGTGACTTCCATCTGTACCTCAAAAGATCCGTTACTGACCACCGAAACATGTCTGTTTCCATCCCTTGTTCTACAAAATGTATCTATCCATCATGGTAGTATTATGTATCCATGGAAACAGAACTGTATCTTCAAGAAAATGTATCCGGACAAAATTATTTGCCAAACTGATTTTTCGGCTTTTTTTTCTTCCTGTTTATATGAATGATATTAAAGCTCACTTTTTTCCTTTTACGGATTGTTGGTTTTCTTTTTAAGTTTTCTTTAATTTTCCATTGAATTTTTTTCCTTTTCTTATCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCACATTGAGACTGCCGTAGACAACTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCGAAGAAACGACACGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAATAATTTGCTGTGCCCACCAAGTGCTCCTCTTGTGGCTGATGCAGCACCTGCCTCCATGAATAATTTGCAGTTGAGTAAACCGGACTCGCCACAAAATCAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTAACCGGGGAAGCCAAGGACCTTGGGGGTGAGAAAGCAATAGAGTCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATCAAGCCTTGCTGA
Protein sequence

>MS.gene012560.t1

MAEHRVSEALPVGPTQLLPEQQKAQEIKKEPVGESPSATESQKSELPSSNENSNSETLIAFPSLVLDQRSFDVQGIPNTLNSVVKSEIKETVGPLENEKEVAKREAVQEPSAQAEEQLQVTVSSNPPSELSPNSVTKSLSSVPSPTIQIQNMSPPIVSNTPVAEVNKKSTSGGRALSSVSVPRTPSSDGFNWRKYGQKQVKSPTTGSRSYYRCTQSNCCAKKIECWDHSGHVIETVYKSEHSHDPPRKISSIRESKFAPSNEPTAENSVLVKPVNAPKDSDPSTSSKAQEETPCSSDKKPQNSSDINGNGKIVLNEEHVDEPDPKRRKEKGDLVHSDSSVKPEKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMNNLLCPPSAPLVADAAPASMNNLQLSKPDSPQNQKISTQWSVDTEGELTGEAKDLGGEKAIESARTLLSIGFEIKPC