AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012661

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012661.t1 MTR_4g132430 93.320 494 26 6 7 495 1 492 0.0 830
MS.gene012661.t1 MTR_4g132430 97.486 358 9 0 138 495 1 358 0.0 722
MS.gene012661.t1 MTR_2g023930 54.808 520 161 21 1 476 43 532 2.07e-139 413
MS.gene012661.t1 MTR_2g088000 49.614 518 195 16 34 494 81 589 7.07e-129 387
MS.gene012661.t1 MTR_3g053330 41.538 455 207 11 34 473 34 444 8.71e-101 311
MS.gene012661.t1 MTR_4g049790 39.004 482 234 11 39 481 60 520 6.23e-87 278
MS.gene012661.t1 MTR_6g038890 93.846 130 8 0 165 294 89 218 2.25e-86 265
MS.gene012661.t1 MTR_4g049760 42.956 433 202 8 89 480 79 507 2.26e-82 265
MS.gene012661.t1 MTR_7g110720 39.914 466 188 15 41 484 17 412 4.02e-81 259
MS.gene012661.t1 MTR_4g047580 38.386 508 229 15 21 474 15 492 4.96e-80 259
MS.gene012661.t1 MTR_7g110720 38.793 464 169 14 41 484 17 385 1.19e-74 241
MS.gene012661.t1 MTR_5g044695 97.196 107 3 0 188 294 1 107 3.04e-72 224
MS.gene012661.t1 MTR_5g044695 94.737 95 5 0 169 263 8 102 4.17e-58 187
MS.gene012661.t1 MTR_2g045360 33.596 381 215 9 117 489 68 418 2.10e-52 183
MS.gene012661.t1 MTR_7g009730 31.224 474 196 16 109 474 32 483 5.30e-48 174
MS.gene012661.t1 MTR_4g107970 37.209 344 164 8 94 385 46 389 3.24e-43 162
MS.gene012661.t1 MTR_4g107970 38.462 312 141 7 125 385 1 312 4.26e-42 157
MS.gene012661.t1 MTR_4g094412 84.416 77 12 0 248 324 218 294 5.27e-42 156
MS.gene012661.t1 MTR_4g094412 84.416 77 12 0 248 324 227 303 5.76e-42 156
MS.gene012661.t1 MTR_4g007060 33.190 232 97 8 239 470 103 276 8.95e-29 115
MS.gene012661.t1 MTR_4g007060 33.190 232 97 8 239 470 137 310 1.14e-28 115
MS.gene012661.t1 MTR_2g105060 27.778 360 157 13 113 470 51 309 2.94e-27 112
MS.gene012661.t1 MTR_1g013760 33.051 236 128 7 104 338 8 214 9.19e-27 109
MS.gene012661.t1 MTR_1g013790 32.599 227 95 6 116 340 7 177 3.45e-26 107
MS.gene012661.t1 MTR_3g106060 27.419 372 165 9 106 473 15 285 2.99e-25 105
MS.gene012661.t1 MTR_3g056100 40.268 149 74 4 247 381 254 401 1.48e-24 106
MS.gene012661.t1 MTR_3g056100 49.180 61 29 2 264 324 99 157 1.30e-11 67.0
MS.gene012661.t1 MTR_3g056100 40.268 149 74 4 247 381 241 388 1.88e-24 105
MS.gene012661.t1 MTR_3g056100 49.180 61 29 2 264 324 99 157 1.38e-11 67.0
MS.gene012661.t1 MTR_3g009470 48.039 102 52 1 225 326 456 556 2.01e-24 107
MS.gene012661.t1 MTR_3g009470 41.935 93 52 2 233 325 249 339 1.47e-14 76.6
MS.gene012661.t1 MTR_5g094430 50.526 95 45 2 247 341 213 305 2.79e-24 105
MS.gene012661.t1 MTR_5g094430 50.820 61 28 2 264 324 66 124 2.24e-12 69.3
MS.gene012661.t1 MTR_5g094430 50.526 95 45 2 247 341 235 327 2.97e-24 105
MS.gene012661.t1 MTR_5g094430 50.820 61 28 2 264 324 88 146 1.93e-12 69.3
MS.gene012661.t1 MTR_3g056100 43.182 132 60 4 247 364 398 528 4.89e-24 105
MS.gene012661.t1 MTR_3g056100 49.180 61 29 2 264 324 243 301 1.24e-11 67.4
MS.gene012661.t1 MTR_3g056100 43.182 132 60 4 247 364 385 515 6.32e-24 105
MS.gene012661.t1 MTR_3g056100 49.180 61 29 2 264 324 243 301 1.38e-11 67.4
MS.gene012661.t1 MTR_3g031220 54.430 79 35 1 246 324 347 424 6.65e-24 105
MS.gene012661.t1 MTR_3g031220 38.298 94 52 3 233 326 171 258 5.92e-13 71.2
MS.gene012661.t1 MTR_5g094430 55.000 80 35 1 247 326 347 425 7.67e-24 105
MS.gene012661.t1 MTR_5g094430 50.820 61 28 2 264 324 200 258 3.33e-12 68.9
MS.gene012661.t1 MTR_7g071120 42.029 138 63 4 241 375 301 424 1.02e-23 104
MS.gene012661.t1 MTR_7g071120 46.575 73 32 3 252 324 159 224 1.60e-11 67.0
MS.gene012661.t1 MTR_5g074400 52.381 84 39 1 243 326 399 481 4.82e-23 102
MS.gene012661.t1 MTR_5g074400 43.590 78 42 2 264 341 243 318 3.81e-13 72.0
MS.gene012661.t1 MTR_4g013260 53.165 79 36 1 246 324 318 395 5.49e-23 102
MS.gene012661.t1 MTR_4g013260 41.333 75 41 2 250 324 172 243 1.89e-13 72.8
MS.gene012661.t1 MTR_5g097490 44.643 112 59 3 231 341 218 327 5.57e-23 101
MS.gene012661.t1 MTR_2g033820 50.000 82 40 1 248 329 187 267 5.70e-23 100
MS.gene012661.t1 MTR_1g015140 52.703 74 34 1 249 322 87 159 7.73e-23 95.5
MS.gene012661.t1 MTR_7g011820 51.190 84 40 1 243 326 389 471 8.26e-23 102
MS.gene012661.t1 MTR_7g011820 52.459 61 27 2 264 324 228 286 9.45e-13 70.9
MS.gene012661.t1 MTR_7g109800 46.316 95 46 2 248 342 129 218 1.09e-22 98.6
MS.gene012661.t1 MTR_2g105060 32.468 231 83 10 246 470 71 234 1.86e-22 96.7
MS.gene012661.t1 MTR_7g028415 52.113 71 33 1 253 323 82 151 3.02e-22 94.0
MS.gene012661.t1 MTR_7g028710 52.113 71 33 1 253 323 82 151 3.02e-22 94.0
MS.gene012661.t1 MTR_5g042920 50.617 81 39 1 246 326 302 381 7.43e-22 98.2
MS.gene012661.t1 MTR_5g042920 37.615 109 64 3 264 372 151 255 1.03e-12 70.5
MS.gene012661.t1 MTR_7g080020 51.250 80 38 1 247 326 476 554 1.45e-21 99.0
MS.gene012661.t1 MTR_7g080020 48.333 60 29 2 265 324 281 338 7.16e-11 65.1
MS.gene012661.t1 MTR_7g080000 51.250 80 38 1 247 326 415 493 2.62e-21 97.8
MS.gene012661.t1 MTR_7g080000 46.154 65 33 2 260 324 230 292 6.66e-11 65.1
MS.gene012661.t1 MTR_4g082580 46.316 95 44 2 232 326 252 339 2.69e-21 96.3
MS.gene012661.t1 MTR_1g086790 51.948 77 36 1 248 324 142 217 3.50e-21 94.7
MS.gene012661.t1 MTR_7g079010 47.561 82 42 1 241 322 118 198 8.62e-21 91.3
MS.gene012661.t1 MTR_4g094588 44.554 101 49 2 251 345 165 264 1.56e-20 93.2
MS.gene012661.t1 MTR_4g122530 50.649 77 37 1 248 324 192 267 3.18e-20 93.2
MS.gene012661.t1 MTR_3g104750 46.591 88 46 1 235 322 75 161 5.77e-20 87.4
MS.gene012661.t1 MTR_7g100510 41.489 94 54 1 231 324 328 420 6.35e-20 92.4
MS.gene012661.t1 MTR_7g100510 50.000 60 28 2 265 324 190 247 1.30e-11 67.0
MS.gene012661.t1 MTR_5g043880 47.561 82 42 1 240 321 100 180 7.10e-20 90.1
MS.gene012661.t1 MTR_8g092010 45.946 74 39 1 251 324 95 167 1.55e-19 86.7
MS.gene012661.t1 MTR_4g130900 50.633 79 36 2 248 324 343 420 3.50e-19 90.5
MS.gene012661.t1 MTR_7g109600 52.703 74 32 1 264 337 53 123 3.55e-19 87.8
MS.gene012661.t1 MTR_5g091390 50.000 74 36 1 251 324 144 216 1.51e-18 86.7
MS.gene012661.t1 MTR_8g096730 45.570 79 42 1 249 327 55 132 1.66e-18 82.8
MS.gene012661.t1 MTR_3g095080 48.000 75 38 1 247 321 151 224 1.78e-18 85.1
MS.gene012661.t1 MTR_3g095080 48.000 75 38 1 247 321 127 200 2.11e-18 84.3
MS.gene012661.t1 MTR_1g009613 48.649 74 38 0 248 321 246 319 2.53e-18 86.7
MS.gene012661.t1 MTR_8g007270 43.902 82 45 1 240 321 130 210 3.42e-18 84.0
MS.gene012661.t1 MTR_3g095040 47.297 74 38 1 251 324 105 177 5.20e-18 82.8
MS.gene012661.t1 MTR_5g016610 48.684 76 39 0 248 323 183 258 8.12e-18 84.0
MS.gene012661.t1 MTR_4g094908 48.101 79 41 0 248 326 250 328 9.43e-18 84.7
MS.gene012661.t1 MTR_8g087000 52.113 71 29 1 264 334 77 142 1.87e-17 82.4
MS.gene012661.t1 MTR_8g087000 52.113 71 29 1 264 334 76 141 1.95e-17 82.0
MS.gene012661.t1 MTR_2g083870 39.623 106 50 2 233 324 35 140 3.06e-17 82.0
MS.gene012661.t1 MTR_8g028565 52.113 71 34 0 264 334 155 225 3.62e-17 83.2
MS.gene012661.t1 MTR_8g092140 47.368 76 38 2 247 321 142 216 5.16e-17 80.9
MS.gene012661.t1 MTR_1g070455 52.459 61 29 0 265 325 294 354 8.65e-17 82.4
MS.gene012661.t1 MTR_2g016770 51.613 62 30 0 264 325 35 96 1.12e-16 79.3
MS.gene012661.t1 MTR_4g127040 47.297 74 39 0 248 321 229 302 1.18e-16 81.3
MS.gene012661.t1 MTR_2g016770 52.459 61 29 0 265 325 28 88 1.49e-16 79.0
MS.gene012661.t1 MTR_2g032030 48.571 70 36 0 265 334 268 337 1.75e-16 82.4
MS.gene012661.t1 MTR_2g032030 48.571 70 36 0 265 334 268 337 3.25e-16 81.3
MS.gene012661.t1 MTR_2g024350 34.074 135 79 3 259 383 3 137 3.59e-16 78.2
MS.gene012661.t1 MTR_3g108960 45.946 74 40 0 248 321 298 371 7.28e-16 79.7
MS.gene012661.t1 MTR_1g077780 44.304 79 43 1 248 326 46 123 8.67e-16 74.7
MS.gene012661.t1 MTR_7g079040 37.607 117 71 2 220 334 108 224 1.02e-15 78.6
MS.gene012661.t1 MTR_2g024380 46.970 66 35 0 259 324 246 311 2.06e-15 79.0
MS.gene012661.t1 MTR_0117s0040 54.386 57 26 0 265 321 75 131 3.57e-15 75.5
MS.gene012661.t1 MTR_3g009470 41.935 93 52 2 233 325 249 339 5.73e-15 77.8
MS.gene012661.t1 MTR_8g098945 44.286 70 39 0 265 334 130 199 1.67e-14 74.3
MS.gene012661.t1 MTR_4g007060 42.857 63 36 0 239 301 137 199 1.68e-14 73.6
MS.gene012661.t1 MTR_7g062220 52.308 65 30 1 264 328 124 187 1.82e-14 74.7
MS.gene012661.t1 MTR_6g086555 48.000 75 37 2 251 324 193 266 2.48e-14 75.1
MS.gene012661.t1 MTR_1g099600 43.421 76 43 0 265 340 186 261 3.65e-14 73.6
MS.gene012661.t1 MTR_1g078260 43.056 72 39 2 251 321 234 304 2.15e-13 72.8
MS.gene012661.t1 MTR_3g031220 38.298 94 52 3 233 326 171 258 2.83e-13 71.6
MS.gene012661.t1 MTR_3g090860 53.333 60 26 1 263 320 132 191 7.23e-13 70.1
MS.gene012661.t1 MTR_8g027860 47.826 69 34 1 263 329 135 203 2.34e-12 68.6
MS.gene012661.t1 MTR_5g067680 42.529 87 38 2 265 339 203 289 2.45e-12 68.6
MS.gene012661.t1 MTR_8g069935 30.435 115 65 3 223 324 279 391 5.18e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012661.t1 AT1G62300 50.688 509 186 17 10 473 50 538 4.29e-125 376
MS.gene012661.t1 AT4G04450 47.773 494 189 15 34 473 25 503 5.85e-124 372
MS.gene012661.t1 AT4G22070 47.776 517 172 14 33 476 26 517 1.09e-112 343
MS.gene012661.t1 AT4G22070 47.776 517 172 14 33 476 26 517 1.09e-112 343
MS.gene012661.t1 AT4G22070 47.776 517 172 14 33 476 26 517 1.09e-112 343
MS.gene012661.t1 AT4G22070 47.776 517 172 14 33 476 26 517 1.09e-112 343
MS.gene012661.t1 AT4G04450 49.761 418 158 13 99 473 1 409 6.11e-110 333
MS.gene012661.t1 AT4G01720 45.312 384 169 15 103 470 85 443 2.12e-66 222
MS.gene012661.t1 AT5G15130 44.118 272 115 5 236 475 157 423 8.72e-50 178
MS.gene012661.t1 AT5G15130 44.118 272 115 5 236 475 199 465 1.15e-49 179
MS.gene012661.t1 AT1G68150 42.194 237 110 6 120 345 96 316 5.89e-47 167
MS.gene012661.t1 AT1G18860 42.069 290 107 8 247 475 222 511 6.23e-44 162
MS.gene012661.t1 AT1G69810 36.364 308 155 10 114 387 22 322 4.64e-38 143
MS.gene012661.t1 AT1G69810 54.930 142 58 3 247 387 128 264 2.27e-36 137
MS.gene012661.t1 AT4G31800 35.270 241 125 5 111 342 36 254 2.93e-33 128
MS.gene012661.t1 AT1G80840 34.034 238 108 7 98 324 7 206 3.73e-31 122
MS.gene012661.t1 AT2G25000 32.870 216 103 4 113 328 37 210 1.10e-26 109
MS.gene012661.t1 AT2G25000 33.173 208 97 4 121 328 2 167 2.32e-26 107
MS.gene012661.t1 AT2G25000 33.173 208 97 4 121 328 2 167 2.32e-26 107
MS.gene012661.t1 AT2G25000 33.173 208 97 4 121 328 24 189 3.33e-26 107
MS.gene012661.t1 AT4G31800 55.000 80 36 0 263 342 110 189 3.53e-25 104
MS.gene012661.t1 AT2G38470 53.086 81 37 1 246 326 344 423 2.72e-24 106
MS.gene012661.t1 AT2G38470 46.575 73 36 3 252 324 173 242 8.05e-13 70.9
MS.gene012661.t1 AT4G26640 55.128 78 34 1 247 324 188 264 6.98e-24 103
MS.gene012661.t1 AT4G26640 38.095 84 50 2 241 324 12 93 4.49e-12 68.2
MS.gene012661.t1 AT4G26640 55.128 78 34 1 247 324 188 264 6.98e-24 103
MS.gene012661.t1 AT4G26640 38.095 84 50 2 241 324 12 93 4.49e-12 68.2
MS.gene012661.t1 AT4G26640 55.128 78 34 1 247 324 188 264 6.98e-24 103
MS.gene012661.t1 AT4G26640 38.095 84 50 2 241 324 12 93 4.49e-12 68.2
MS.gene012661.t1 AT4G26640 55.128 78 34 1 247 324 188 264 6.98e-24 103
MS.gene012661.t1 AT4G26640 38.095 84 50 2 241 324 12 93 4.49e-12 68.2
MS.gene012661.t1 AT4G26640 55.128 78 34 1 247 324 324 400 1.53e-23 103
MS.gene012661.t1 AT4G26640 38.095 84 50 2 241 324 148 229 6.03e-12 68.2
MS.gene012661.t1 AT4G26640 55.128 78 34 1 247 324 292 368 1.65e-23 103
MS.gene012661.t1 AT4G26640 38.095 84 50 2 241 324 116 197 6.26e-12 68.2
MS.gene012661.t1 AT4G26640 55.128 78 34 1 247 324 364 440 1.99e-23 103
MS.gene012661.t1 AT4G26640 38.095 84 50 2 241 324 188 269 6.13e-12 68.6
MS.gene012661.t1 AT5G56270 50.000 90 44 1 237 326 460 548 2.87e-23 103
MS.gene012661.t1 AT5G56270 49.180 61 29 2 265 325 274 332 1.89e-11 67.0
MS.gene012661.t1 AT5G26170 52.778 72 33 1 250 321 99 169 3.82e-23 96.7
MS.gene012661.t1 AT2G04880 47.674 86 44 1 243 328 262 346 4.84e-23 102
MS.gene012661.t1 AT2G04880 31.081 148 82 5 262 398 109 247 6.14e-13 71.2
MS.gene012661.t1 AT2G04880 47.674 86 44 1 243 328 286 370 6.19e-23 102
MS.gene012661.t1 AT2G04880 47.143 70 34 3 262 330 109 176 1.45e-12 70.1
MS.gene012661.t1 AT1G29860 46.392 97 48 2 248 344 120 212 6.21e-23 99.0
MS.gene012661.t1 AT5G49520 51.948 77 36 1 248 324 205 280 7.75e-23 100
MS.gene012661.t1 AT5G07100 48.276 87 44 1 238 324 115 200 8.88e-23 97.1
MS.gene012661.t1 AT5G07100 39.189 74 44 1 264 337 24 96 4.01e-11 63.2
MS.gene012661.t1 AT5G07100 48.276 87 44 1 238 324 115 200 8.88e-23 97.1
MS.gene012661.t1 AT5G07100 39.189 74 44 1 264 337 24 96 4.01e-11 63.2
MS.gene012661.t1 AT5G07100 48.276 87 44 1 238 324 115 200 8.88e-23 97.1
MS.gene012661.t1 AT5G07100 39.189 74 44 1 264 337 24 96 4.01e-11 63.2
MS.gene012661.t1 AT5G07100 48.276 87 44 1 238 324 115 200 8.88e-23 97.1
MS.gene012661.t1 AT5G07100 39.189 74 44 1 264 337 24 96 4.01e-11 63.2
MS.gene012661.t1 AT1G13960 43.697 119 53 4 207 324 210 315 1.18e-22 99.8
MS.gene012661.t1 AT1G13960 49.180 61 29 2 264 324 76 134 6.21e-12 67.4
MS.gene012661.t1 AT1G13960 51.190 84 40 1 241 324 386 468 1.27e-22 101
MS.gene012661.t1 AT1G13960 49.180 61 29 2 264 324 229 287 5.39e-12 68.6
MS.gene012661.t1 AT5G07100 48.276 87 44 1 238 324 208 293 1.36e-22 98.6
MS.gene012661.t1 AT5G07100 39.189 74 44 1 264 337 117 189 8.99e-11 63.5
MS.gene012661.t1 AT2G03340 48.837 86 43 1 241 326 392 476 1.24e-21 98.2
MS.gene012661.t1 AT2G03340 49.180 61 29 2 264 324 250 308 2.57e-12 69.3
MS.gene012661.t1 AT5G13080 53.425 73 33 1 251 323 54 125 1.66e-21 91.3
MS.gene012661.t1 AT4G18170 51.948 77 36 1 248 324 156 231 1.69e-21 95.5
MS.gene012661.t1 AT2G47260 45.161 93 50 1 240 332 150 241 2.03e-21 95.9
MS.gene012661.t1 AT1G64000 45.882 85 45 1 238 322 88 171 2.44e-21 92.0
MS.gene012661.t1 AT5G41570 51.250 80 37 2 244 322 77 155 5.92e-21 90.5
MS.gene012661.t1 AT2G46130 47.126 87 45 1 236 322 2 87 7.56e-21 88.2
MS.gene012661.t1 AT4G31800 32.500 200 104 5 111 301 36 213 1.03e-20 91.7
MS.gene012661.t1 AT1G55600 43.333 90 50 1 237 326 280 368 1.97e-20 94.4
MS.gene012661.t1 AT4G26440 41.071 112 63 2 237 348 345 453 1.98e-20 94.7
MS.gene012661.t1 AT3G01080 46.429 84 44 1 241 324 283 365 2.42e-20 93.6
MS.gene012661.t1 AT3G01080 49.180 61 29 2 264 324 167 225 7.71e-11 64.3
MS.gene012661.t1 AT3G01080 49.367 79 39 1 246 324 326 403 2.67e-20 94.0
MS.gene012661.t1 AT3G01080 49.180 61 29 2 264 324 205 263 8.20e-11 64.7
MS.gene012661.t1 AT3G62340 53.165 79 36 1 251 329 105 182 2.76e-20 91.3
MS.gene012661.t1 AT4G30935 41.176 119 58 3 231 341 298 412 3.68e-20 93.6
MS.gene012661.t1 AT1G69310 45.783 83 44 1 239 321 122 203 3.91e-20 90.9
MS.gene012661.t1 AT1G69310 45.783 83 44 1 239 321 122 203 3.91e-20 90.9
MS.gene012661.t1 AT1G69310 45.783 83 44 1 239 321 122 203 3.91e-20 90.9
MS.gene012661.t1 AT2G30250 50.000 80 39 1 247 326 311 389 4.23e-20 92.8
MS.gene012661.t1 AT5G46350 50.000 74 36 1 251 324 170 242 4.52e-20 91.7
MS.gene012661.t1 AT3G01970 51.389 72 34 1 250 321 51 121 1.45e-19 85.9
MS.gene012661.t1 AT2G23320 59.322 59 24 0 265 323 241 299 1.06e-18 87.4
MS.gene012661.t1 AT5G64810 47.887 71 36 1 251 321 97 166 1.09e-18 84.7
MS.gene012661.t1 AT2G30590 50.000 82 40 1 248 328 297 378 1.12e-18 88.2
MS.gene012661.t1 AT3G58710 42.056 107 47 2 233 324 25 131 1.24e-18 86.3
MS.gene012661.t1 AT3G58710 42.453 106 47 2 233 324 25 130 2.01e-18 85.9
MS.gene012661.t1 AT5G28650 62.264 53 20 0 269 321 267 319 3.83e-18 85.9
MS.gene012661.t1 AT2G44745 46.667 75 39 1 247 321 128 201 3.96e-18 83.6
MS.gene012661.t1 AT1G29280 52.459 61 29 0 264 324 74 134 7.62e-18 84.0
MS.gene012661.t1 AT4G39410 48.000 75 38 1 247 321 206 279 9.55e-18 84.3
MS.gene012661.t1 AT3G04670 57.895 57 24 0 265 321 263 319 2.22e-17 83.6
MS.gene012661.t1 AT4G24240 48.684 76 39 0 248 323 265 340 3.29e-17 83.6
MS.gene012661.t1 AT4G31550 48.649 74 38 0 248 321 230 303 3.53e-17 83.2
MS.gene012661.t1 AT4G31550 48.649 74 38 0 248 321 229 302 3.56e-17 82.8
MS.gene012661.t1 AT2G24570 48.649 74 38 0 248 321 227 300 5.13e-17 82.4
MS.gene012661.t1 AT4G01250 40.426 94 51 1 246 334 105 198 1.46e-16 80.9
MS.gene012661.t1 AT5G52830 46.753 77 41 0 258 334 159 235 1.84e-16 81.3
MS.gene012661.t1 AT2G37260 45.977 87 41 3 259 340 264 349 1.84e-16 81.3
MS.gene012661.t1 AT2G37260 43.243 74 40 2 265 338 86 157 7.27e-14 73.2
MS.gene012661.t1 AT2G37260 45.977 87 41 3 259 340 262 347 1.98e-16 81.3
MS.gene012661.t1 AT2G37260 43.243 74 40 2 265 338 84 155 7.56e-14 73.2
MS.gene012661.t1 AT2G34830 46.053 76 40 1 250 324 200 275 2.01e-16 81.6
MS.gene012661.t1 AT1G30650 46.053 76 40 1 250 324 202 277 2.44e-16 81.6
MS.gene012661.t1 AT2G34830 46.053 76 40 1 250 324 209 284 2.50e-16 81.6
MS.gene012661.t1 AT2G37260 45.977 87 41 3 259 340 344 429 3.96e-16 80.9
MS.gene012661.t1 AT2G37260 43.243 74 40 2 265 338 166 237 1.21e-13 73.2
MS.gene012661.t1 AT2G46130 43.678 87 44 2 236 322 2 83 7.37e-16 73.9
MS.gene012661.t1 AT4G23550 41.975 81 47 0 259 339 135 215 1.30e-15 78.2
MS.gene012661.t1 AT1G69310 42.169 83 43 2 239 321 122 199 3.51e-15 76.3
MS.gene012661.t1 AT5G43290 35.455 110 52 3 221 329 87 178 1.16e-14 74.7
MS.gene012661.t1 AT5G45050 40.449 89 41 1 264 340 1152 1240 2.09e-13 73.6
MS.gene012661.t1 AT5G45050 40.449 89 41 1 264 340 1180 1268 2.27e-13 73.6
MS.gene012661.t1 AT5G45050 40.449 89 41 1 264 340 1041 1129 2.45e-13 73.2
MS.gene012661.t1 AT2G21900 43.548 62 34 1 263 324 108 168 2.88e-13 69.3
MS.gene012661.t1 AT2G46400 42.500 80 44 1 243 320 83 162 3.34e-12 67.8
MS.gene012661.t1 AT5G24110 50.000 60 28 1 263 320 112 171 5.26e-12 67.0
MS.gene012661.t1 AT5G45260 37.255 102 57 3 240 339 1189 1285 7.54e-12 68.6
MS.gene012661.t1 AT2G40740 35.849 106 51 3 264 352 173 278 3.00e-11 64.7
MS.gene012661.t1 AT2G40740 35.849 106 51 3 264 352 182 287 3.47e-11 64.7
MS.gene012661.t1 AT3G01080 49.180 61 29 2 264 324 205 263 4.59e-11 64.7

Find 125 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGAAGGCCGGAGAATT+TGG 0.150973 8.1:-1678973 None:intergenic
AAGAATTCTGGCTAGTAAAT+TGG 0.190593 8.1:-1678763 None:intergenic
TCAGCATTTCCTTCAGCTTT+TGG 0.196513 8.1:-1677756 None:intergenic
GCTGCTACTGTGTTACTATC+TGG 0.288928 8.1:+1678708 MS.gene012661:CDS
GGGATTACTGTTATTGTTGC+TGG 0.289882 8.1:-1679132 None:intergenic
GGCATTGGAGGGGTTTAATC+TGG 0.291166 8.1:-1678148 None:intergenic
GGGAGGAGCAGCACCAATTA+TGG 0.310343 8.1:-1679111 None:intergenic
GAGGCTGTCCAAGCTGGAAT+TGG 0.315291 8.1:-1678893 None:intergenic
CACTTCCGGTGTTAGTAATA+AGG 0.320090 8.1:-1677427 None:intergenic
AGAATTCTGGCTAGTAAATT+GGG 0.323046 8.1:-1678762 None:intergenic
TTCTGAGGTGTGCATGGTTC+AGG 0.327374 8.1:-1678060 None:intergenic
ATCAGAACTAGTACAACTTT+TGG 0.338708 8.1:+1678110 MS.gene012661:CDS
CACCATTGATTGATCACTTC+CGG 0.338711 8.1:-1677441 None:intergenic
GGATGCCAATGGCGAAAATA+TGG 0.339559 8.1:+1678353 MS.gene012661:CDS
GGTAGCACTGTTGATGATAT+TGG 0.345701 8.1:-1679153 None:intergenic
GAAACATCATCAAGTTGTTC+TGG 0.348285 8.1:-1676975 None:intergenic
CCTGATCATGTTCTGTGGTT+TGG 0.349953 8.1:-1677846 None:intergenic
GCTGCTATCTCCTCCATAAT+TGG 0.361075 8.1:+1679098 MS.gene012661:CDS
TGCTTGATCAGCGGCATTGG+AGG 0.372243 8.1:-1678160 None:intergenic
GTAGCACTGTTGATGATATT+GGG 0.374246 8.1:-1679152 None:intergenic
GCGAGTGCTGCCGTGAAGTT+TGG 0.385939 8.1:-1679074 None:intergenic
CGGCATGAATCGTGTAACTA+TGG 0.386196 8.1:+1676911 MS.gene012661:CDS
CTTGGACAGCCTCAAAACTT+TGG 0.392430 8.1:+1678903 MS.gene012661:CDS
AGAGCAATTAGGAAGAATTC+TGG 0.399082 8.1:-1678775 None:intergenic
TTACAGATGCACAATGGCTC+TGG 0.402318 8.1:+1678415 MS.gene012661:CDS
AGACTCACTTGTTTGCGAAC+GGG 0.403359 8.1:-1678443 None:intergenic
AGTTCTGATGCGTCTGGATC+AGG 0.404046 8.1:-1678096 None:intergenic
TGATCATCCACTTCTGCTGC+TGG 0.410282 8.1:-1678030 None:intergenic
CCTGTTGAGTTGGATGCAAC+TGG 0.412568 8.1:-1679019 None:intergenic
TACCATGTGGGCTTCTGATC+GGG 0.414425 8.1:-1678226 None:intergenic
CAACATCTTGAGACATTTGA+AGG 0.433132 8.1:-1678986 None:intergenic
CTGTAATATGCGCGAGGACA+AGG 0.435386 8.1:-1678398 None:intergenic
TATCTGTAGTGTCGCGTGTA+AGG 0.437510 8.1:-1678851 None:intergenic
CCAGTTGCATCCAACTCAAC+AGG 0.445863 8.1:+1679019 MS.gene012661:CDS
AGGCTGTCCAAGCTGGAATT+GGG 0.454087 8.1:-1678892 None:intergenic
TCCTAATTGCTCTTCTAGCA+TGG 0.455237 8.1:+1678785 MS.gene012661:CDS
TATAACCAATCCAAATTCTC+CGG 0.471393 8.1:+1678963 MS.gene012661:CDS
GTGTGCATGGTTCAGGCTCT+TGG 0.473309 8.1:-1678053 None:intergenic
GAAATTGACCTGTTCAGTCT+TGG 0.478191 8.1:-1677501 None:intergenic
GCTGCGGTGGTCGATGCCAT+TGG 0.480782 8.1:-1678684 None:intergenic
CTGCTACTGTGTTACTATCT+GGG 0.480934 8.1:+1678709 MS.gene012661:CDS
GCTTGATCAGCGGCATTGGA+GGG 0.485891 8.1:-1678159 None:intergenic
GAAGTTTGGATCCGCGGTGA+TGG 0.486096 8.1:-1679060 None:intergenic
CAGCCTCAAAACTTTGGATC+AGG 0.489452 8.1:+1678909 MS.gene012661:CDS
GGATTACTGTTATTGTTGCT+GGG 0.489961 8.1:-1679131 None:intergenic
TCTAGTGTCACAGTAGGAAA+TGG 0.493043 8.1:-1678828 None:intergenic
TGTACTAGTTCTGATGCGTC+TGG 0.496058 8.1:-1678102 None:intergenic
TAAGCGTGCCAAGACTGAAC+AGG 0.497408 8.1:+1677493 MS.gene012661:CDS
ATTTGCTTGATCAGCGGCAT+TGG 0.498345 8.1:-1678163 None:intergenic
GGCTCTTTCTGATTGTTCTG+AGG 0.499101 8.1:-1678075 None:intergenic
GGCATAGCAGCAGGTGGGAG+TGG 0.499597 8.1:-1678663 None:intergenic
ATCTTGAGACATTTGAAGGC+CGG 0.503538 8.1:-1678982 None:intergenic
TAGCAGCAGGTGGGAGTGGA+TGG 0.505934 8.1:-1678659 None:intergenic
GACTCACTTGTTTGCGAACG+GGG 0.507020 8.1:-1678442 None:intergenic
TCTCCTTCCCAATTCCAGCT+TGG 0.508244 8.1:+1678885 MS.gene012661:CDS
TTTACATTTCAGATTGTCAA+AGG 0.510724 8.1:+1677955 MS.gene012661:intron
CTTGATCAGCGGCATTGGAG+GGG 0.514641 8.1:-1678158 None:intergenic
CCAAACCACAGAACATGATC+AGG 0.515476 8.1:+1677846 MS.gene012661:CDS
ATACCATGTGGGCTTCTGAT+CGG 0.516534 8.1:-1678227 None:intergenic
ATGAATCTAATAAGCACAAA+CGG 0.517014 8.1:+1676840 MS.gene012661:CDS
GGTCAATGTCAAGTGCTGAT+GGG 0.517767 8.1:+1678730 MS.gene012661:CDS
GGGTCAATGTCAAGTGCTGA+TGG 0.517914 8.1:+1678729 MS.gene012661:CDS
TGATTGTTCTGAGGTGTGCA+TGG 0.520062 8.1:-1678066 None:intergenic
GCCATGCTAGAAGAGCAATT+AGG 0.522733 8.1:-1678786 None:intergenic
AAAGGAAAAGCTGAGGAGAA+AGG 0.526527 8.1:+1677973 MS.gene012661:CDS
GAGCAATTGCAAGAGGAGCT+TGG 0.529769 8.1:+1677715 MS.gene012661:CDS
AAAGCTGAGGAGAAAGGAGA+TGG 0.531880 8.1:+1677979 MS.gene012661:CDS
GCATTGGAGGGGTTTAATCT+GGG 0.534841 8.1:-1678147 None:intergenic
GATGCCATTGGCATAGCAGC+AGG 0.540165 8.1:-1678672 None:intergenic
GTTTGGATCCGCGGTGATGG+CGG 0.540992 8.1:-1679057 None:intergenic
GATCAATCAATGGTGGATGA+TGG 0.542601 8.1:+1677449 MS.gene012661:CDS
TTAATCTGGGAAGCTGACTT+CGG 0.543926 8.1:-1678134 None:intergenic
TCACAATTGCAGATCAATGA+TGG 0.544968 8.1:+1678332 MS.gene012661:intron
TGTGGGCTTCTGATCGGGCA+CGG 0.545553 8.1:-1678221 None:intergenic
TACAGATGCACAATGGCTCT+GGG 0.545795 8.1:+1678416 MS.gene012661:CDS
AGTGATGATGCCTGTTGAGT+TGG 0.552709 8.1:-1679029 None:intergenic
CACCGGAAGTGATCAATCAA+TGG 0.556816 8.1:+1677439 MS.gene012661:CDS
CTTCAAATGTCTCAAGATGT+TGG 0.558376 8.1:+1678987 MS.gene012661:CDS
CAGACTCACTTGTTTGCGAA+CGG 0.559552 8.1:-1678444 None:intergenic
CACAGTAGCAGCAGCTGCGG+TGG 0.562058 8.1:-1678697 None:intergenic
GAATGGTCCAGCAGCAGAAG+TGG 0.565888 8.1:+1678023 MS.gene012661:CDS
TTCTGCATTTGCTTGATCAG+CGG 0.571955 8.1:-1678169 None:intergenic
CCCACCTGCTGCTATGCCAA+TGG 0.574594 8.1:+1678668 MS.gene012661:CDS
GAAGGCCGGAGAATTTGGAT+TGG 0.577352 8.1:-1678968 None:intergenic
CGCGACACTACAGATAATAA+CGG 0.582926 8.1:+1678858 MS.gene012661:CDS
GCCATTGGCATAGCAGCAGG+TGG 0.589340 8.1:-1678669 None:intergenic
TGTAATATGCGCGAGGACAA+GGG 0.590385 8.1:-1678397 None:intergenic
CAACTCCTTATTACTAACAC+CGG 0.591469 8.1:+1677422 MS.gene012661:CDS
CAAATGTCTCAAGATGTTGG+AGG 0.596501 8.1:+1678990 MS.gene012661:CDS
AATCACCTGATCATGTTCTG+TGG 0.597094 8.1:-1677851 None:intergenic
GTGCTTATTAGATTCATCGT+CGG 0.598438 8.1:-1676834 None:intergenic
ATTATAGGTTCAACGTTGTG+CGG 0.604622 8.1:+1678593 MS.gene012661:intron
CGCATATTACAGATGCACAA+TGG 0.609217 8.1:+1678409 MS.gene012661:CDS
TGCAGAGAACCAAAAGCTGA+AGG 0.611336 8.1:+1677747 MS.gene012661:CDS
CACCGCGGATCCAAACTTCA+CGG 0.616851 8.1:+1679064 MS.gene012661:CDS
TGCCCGATCAGAAGCCCACA+TGG 0.617135 8.1:+1678224 MS.gene012661:CDS
CGGAAGTGATCAATCAATGG+TGG 0.617601 8.1:+1677442 MS.gene012661:CDS
TGCCGTGAAGTTTGGATCCG+CGG 0.618501 8.1:-1679066 None:intergenic
GTCAATGTCAAGTGCTGATG+GGG 0.622615 8.1:+1678731 MS.gene012661:CDS
TGTCCAAGCTGGAATTGGGA+AGG 0.625433 8.1:-1678888 None:intergenic
TTAGACGGAGCAATTGCAAG+AGG 0.625946 8.1:+1677708 MS.gene012661:intron
GAATTCTGGCTAGTAAATTG+GGG 0.628387 8.1:-1678761 None:intergenic
GTGGCTAGAAAGTTGATGAA+TGG 0.628570 8.1:+1678006 MS.gene012661:CDS
GTAAGGTCTAGTGTCACAGT+AGG 0.632116 8.1:-1678834 None:intergenic
TGAGGAGAAAGGAGATGGTG+TGG 0.634590 8.1:+1677984 MS.gene012661:CDS
TTACTGTTATTGTTGCTGGG+AGG 0.638488 8.1:-1679128 None:intergenic
ATAGGTTCAACGTTGTGCGG+AGG 0.648017 8.1:+1678596 MS.gene012661:intron
TGGTGCTGATGCTGAGAGTG+TGG 0.648731 8.1:-1678808 None:intergenic
CCATTGGCATAGCAGCAGGT+GGG 0.656238 8.1:-1678668 None:intergenic
GATTGTCAAAGGAAAAGCTG+AGG 0.658561 8.1:+1677966 MS.gene012661:intron
AGTGCTTGTGCAATCACTTG+TGG 0.658579 8.1:-1678939 None:intergenic
AGGAGCAGCACCAATTATGG+AGG 0.660834 8.1:-1679108 None:intergenic
TAACACAGTAGCAGCAGCTG+CGG 0.661912 8.1:-1678700 None:intergenic
TAAGCACAAACGGAGCAACA+TGG 0.662166 8.1:+1676850 MS.gene012661:CDS
CTGTTGAGTTGGATGCAACT+GGG 0.664888 8.1:-1679018 None:intergenic
GTGCATCTGTAATATGCGCG+AGG 0.676244 8.1:-1678404 None:intergenic
ACTAATATAGTATACCATGT+GGG 0.681722 8.1:-1678238 None:intergenic
AGATCAATGATGGATGCCAA+TGG 0.705200 8.1:+1678342 MS.gene012661:intron
TTACACGATTCATGCCGCCG+CGG 0.723764 8.1:-1676905 None:intergenic
AATGAAGATGATCAAAACCG+CGG 0.734454 8.1:+1676888 MS.gene012661:CDS
GGAGAAAGGAGATGGTGTGG+TGG 0.745088 8.1:+1677987 MS.gene012661:CDS
GAAGATGATCAAAACCGCGG+CGG 0.745200 8.1:+1676891 MS.gene012661:CDS
TCAGCGCGGAGATTGCAATG+AGG 0.745989 8.1:-1677038 None:intergenic
ACTAAGTGCCGCCATCACCG+CGG 0.753006 8.1:+1679049 MS.gene012661:CDS
TTACGTTGACATGGTCAGCG+CGG 0.778275 8.1:-1677052 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAAGAAAGAAAAAA+TGG - chr8.1:1677079-1677098 None:intergenic 10.0%
!! ATTAGTGAAATAAAAAATAT+TGG + chr8.1:1677247-1677266 MS.gene012661:intron 10.0%
!! AAAATGAAATTAAACTAAGA+TGG - chr8.1:1677534-1677553 None:intergenic 15.0%
!! AATGTGAAAATATTTATCAT+AGG + chr8.1:1677343-1677362 MS.gene012661:intron 15.0%
!! AGAAATATAAGGAAAATATT+TGG + chr8.1:1677120-1677139 MS.gene012661:intron 15.0%
!! ATGTGAAAATATTTATCATA+GGG + chr8.1:1677344-1677363 MS.gene012661:intron 15.0%
!!! TAGTTTAATTTCATTTTACA+GGG + chr8.1:1677537-1677556 MS.gene012661:intron 15.0%
!!! TGTTTCATTTGAAATATTAT+AGG + chr8.1:1678578-1678597 MS.gene012661:intron 15.0%
!!! TTAGTTTAATTTCATTTTAC+AGG + chr8.1:1677536-1677555 MS.gene012661:intron 15.0%
!! AATATTTATCATAGGGATTA+CGG + chr8.1:1677351-1677370 MS.gene012661:intron 20.0%
!! AGTTACAAAGTAGAAATATA+AGG + chr8.1:1677109-1677128 MS.gene012661:intron 20.0%
!! ATTAGTTAATTAAATCAGCT+AGG - chr8.1:1678309-1678328 None:intergenic 20.0%
!! GAATAAAACAAACAGATATT+TGG - chr8.1:1677154-1677173 None:intergenic 20.0%
!! TTGAAATGAAATTATGAAAC+TGG + chr8.1:1677918-1677937 MS.gene012661:intron 20.0%
!!! ACACTTGTTAAATTTTTAGA+CGG + chr8.1:1677693-1677712 MS.gene012661:intron 20.0%
!!! AGTTTAATTTCATTTTACAG+GGG + chr8.1:1677538-1677557 MS.gene012661:intron 20.0%
!!! ATTTTGATAACAACATATGA+AGG + chr8.1:1678627-1678646 MS.gene012661:CDS 20.0%
!!! GGTATAAAGATATTTTAAAC+TGG - chr8.1:1677893-1677912 None:intergenic 20.0%
!!! TCATAATTTCATTTCAAGTA+CGG - chr8.1:1677915-1677934 None:intergenic 20.0%
!!! TTTTGATAACAACATATGAA+GGG + chr8.1:1678628-1678647 MS.gene012661:CDS 20.0%
! AAACAAACAGATATTTGGTT+TGG - chr8.1:1677149-1677168 None:intergenic 25.0%
! AATGAAATTATGAAACTGGA+TGG + chr8.1:1677922-1677941 MS.gene012661:intron 25.0%
! ACTAATATAGTATACCATGT+GGG - chr8.1:1678241-1678260 None:intergenic 25.0%
! ATGAATCTAATAAGCACAAA+CGG + chr8.1:1676840-1676859 MS.gene012661:CDS 25.0%
! TTTACATTTCAGATTGTCAA+AGG + chr8.1:1677955-1677974 MS.gene012661:intron 25.0%
!! AACAAACAGATATTTGGTTT+GGG - chr8.1:1677148-1677167 None:intergenic 25.0%
!! CATAATTTCATTTCAAGTAC+GGG - chr8.1:1677914-1677933 None:intergenic 25.0%
CACTAATATAGTATACCATG+TGG - chr8.1:1678242-1678261 None:intergenic 30.0%
GCGAAAATATGGACAAAAAA+TGG + chr8.1:1678364-1678383 MS.gene012661:CDS 30.0%
TATAACCAATCCAAATTCTC+CGG + chr8.1:1678963-1678982 MS.gene012661:CDS 30.0%
TATGGACAAAAAATGGCTAA+AGG + chr8.1:1678371-1678390 MS.gene012661:CDS 30.0%
TTGATGCAAATATTGTAGAC+TGG + chr8.1:1677395-1677414 MS.gene012661:intron 30.0%
! AAGAATTCTGGCTAGTAAAT+TGG - chr8.1:1678766-1678785 None:intergenic 30.0%
! AGAATTCTGGCTAGTAAATT+GGG - chr8.1:1678765-1678784 None:intergenic 30.0%
! ATCAGAACTAGTACAACTTT+TGG + chr8.1:1678110-1678129 MS.gene012661:CDS 30.0%
!! ACAAACAGATATTTGGTTTG+GGG - chr8.1:1677147-1677166 None:intergenic 30.0%
!! TCATAATTACCTTTGAAGTG+TGG + chr8.1:1677277-1677296 MS.gene012661:intron 30.0%
AAAAATGGCTTACGTTGACA+TGG - chr8.1:1677064-1677083 None:intergenic 35.0%
AAATCACAACCACACTTCAA+AGG - chr8.1:1677289-1677308 None:intergenic 35.0%
AATGAAGATGATCAAAACCG+CGG + chr8.1:1676888-1676907 MS.gene012661:CDS 35.0%
AGAGCAATTAGGAAGAATTC+TGG - chr8.1:1678778-1678797 None:intergenic 35.0%
ATTATAGGTTCAACGTTGTG+CGG + chr8.1:1678593-1678612 MS.gene012661:intron 35.0%
CAACATCTTGAGACATTTGA+AGG - chr8.1:1678989-1679008 None:intergenic 35.0%
CAACTCCTTATTACTAACAC+CGG + chr8.1:1677422-1677441 MS.gene012661:CDS 35.0%
CTTCAAATGTCTCAAGATGT+TGG + chr8.1:1678987-1679006 MS.gene012661:CDS 35.0%
GGATTACTGTTATTGTTGCT+GGG - chr8.1:1679134-1679153 None:intergenic 35.0%
GTGCTTATTAGATTCATCGT+CGG - chr8.1:1676837-1676856 None:intergenic 35.0%
TCACAATTGCAGATCAATGA+TGG + chr8.1:1678332-1678351 MS.gene012661:intron 35.0%
! GAAACATCATCAAGTTGTTC+TGG - chr8.1:1676978-1676997 None:intergenic 35.0%
! GAATTCTGGCTAGTAAATTG+GGG - chr8.1:1678764-1678783 None:intergenic 35.0%
! TTTGTCCATATTTTCGCCAT+TGG - chr8.1:1678361-1678380 None:intergenic 35.0%
!! GTAGCACTGTTGATGATATT+GGG - chr8.1:1679155-1679174 None:intergenic 35.0%
!! GTTTTGTTGCTGTTGCATTA+AGG - chr8.1:1677827-1677846 None:intergenic 35.0%
AAAGGAAAAGCTGAGGAGAA+AGG + chr8.1:1677973-1677992 MS.gene012661:CDS 40.0%
AATCACCTGATCATGTTCTG+TGG - chr8.1:1677854-1677873 None:intergenic 40.0%
ATCTTGAGACATTTGAAGGC+CGG - chr8.1:1678985-1679004 None:intergenic 40.0%
CAAATGTCTCAAGATGTTGG+AGG + chr8.1:1678990-1679009 MS.gene012661:CDS 40.0%
CGCATATTACAGATGCACAA+TGG + chr8.1:1678409-1678428 MS.gene012661:CDS 40.0%
CGCGACACTACAGATAATAA+CGG + chr8.1:1678858-1678877 MS.gene012661:CDS 40.0%
GAAATTGACCTGTTCAGTCT+TGG - chr8.1:1677504-1677523 None:intergenic 40.0%
GACGCATATTATGAGACGAA+AGG - chr8.1:1678548-1678567 None:intergenic 40.0%
GATTGTCAAAGGAAAAGCTG+AGG + chr8.1:1677966-1677985 MS.gene012661:intron 40.0%
GGGATTACTGTTATTGTTGC+TGG - chr8.1:1679135-1679154 None:intergenic 40.0%
TCCTAATTGCTCTTCTAGCA+TGG + chr8.1:1678785-1678804 MS.gene012661:CDS 40.0%
TCTAGTGTCACAGTAGGAAA+TGG - chr8.1:1678831-1678850 None:intergenic 40.0%
TTACTGTTATTGTTGCTGGG+AGG - chr8.1:1679131-1679150 None:intergenic 40.0%
TTCTGCATTTGCTTGATCAG+CGG - chr8.1:1678172-1678191 None:intergenic 40.0%
! CACCATTGATTGATCACTTC+CGG - chr8.1:1677444-1677463 None:intergenic 40.0%
! CACTTCCGGTGTTAGTAATA+AGG - chr8.1:1677430-1677449 None:intergenic 40.0%
! CTGCTACTGTGTTACTATCT+GGG + chr8.1:1678709-1678728 MS.gene012661:CDS 40.0%
! TCAGCATTTCCTTCAGCTTT+TGG - chr8.1:1677759-1677778 None:intergenic 40.0%
! TGTCCTGATCCAAAGTTTTG+AGG - chr8.1:1678915-1678934 None:intergenic 40.0%
! TTAATCTGGGAAGCTGACTT+CGG - chr8.1:1678137-1678156 None:intergenic 40.0%
!! AGATCAATGATGGATGCCAA+TGG + chr8.1:1678342-1678361 MS.gene012661:intron 40.0%
!! GATCAATCAATGGTGGATGA+TGG + chr8.1:1677449-1677468 MS.gene012661:CDS 40.0%
!! GGTAGCACTGTTGATGATAT+TGG - chr8.1:1679156-1679175 None:intergenic 40.0%
!! GTGGCTAGAAAGTTGATGAA+TGG + chr8.1:1678006-1678025 MS.gene012661:CDS 40.0%
AAAGCTGAGGAGAAAGGAGA+TGG + chr8.1:1677979-1677998 MS.gene012661:CDS 45.0%
AGACTCACTTGTTTGCGAAC+GGG - chr8.1:1678446-1678465 None:intergenic 45.0%
AGTGCTTGTGCAATCACTTG+TGG - chr8.1:1678942-1678961 None:intergenic 45.0%
ATACCATGTGGGCTTCTGAT+CGG - chr8.1:1678230-1678249 None:intergenic 45.0%
ATTTGCTTGATCAGCGGCAT+TGG - chr8.1:1678166-1678185 None:intergenic 45.0%
CACCGGAAGTGATCAATCAA+TGG + chr8.1:1677439-1677458 MS.gene012661:CDS 45.0%
CAGACTCACTTGTTTGCGAA+CGG - chr8.1:1678447-1678466 None:intergenic 45.0%
CAGCCTCAAAACTTTGGATC+AGG + chr8.1:1678909-1678928 MS.gene012661:CDS 45.0%
CATTTGAAGGCCGGAGAATT+TGG - chr8.1:1678976-1678995 None:intergenic 45.0%
CCAAACCACAGAACATGATC+AGG + chr8.1:1677846-1677865 MS.gene012661:CDS 45.0%
CCTGATCATGTTCTGTGGTT+TGG - chr8.1:1677849-1677868 None:intergenic 45.0%
CGGAAGTGATCAATCAATGG+TGG + chr8.1:1677442-1677461 MS.gene012661:CDS 45.0%
CGGCATGAATCGTGTAACTA+TGG + chr8.1:1676911-1676930 MS.gene012661:CDS 45.0%
CTTGGACAGCCTCAAAACTT+TGG + chr8.1:1678903-1678922 MS.gene012661:CDS 45.0%
GCATTGGAGGGGTTTAATCT+GGG - chr8.1:1678150-1678169 None:intergenic 45.0%
GCCATGCTAGAAGAGCAATT+AGG - chr8.1:1678789-1678808 None:intergenic 45.0%
GCTGCTATCTCCTCCATAAT+TGG + chr8.1:1679098-1679117 MS.gene012661:CDS 45.0%
GGATGCCAATGGCGAAAATA+TGG + chr8.1:1678353-1678372 MS.gene012661:CDS 45.0%
GGCTCTTTCTGATTGTTCTG+AGG - chr8.1:1678078-1678097 None:intergenic 45.0%
GTAAGGTCTAGTGTCACAGT+AGG - chr8.1:1678837-1678856 None:intergenic 45.0%
TAAGCACAAACGGAGCAACA+TGG + chr8.1:1676850-1676869 MS.gene012661:CDS 45.0%
TACAGATGCACAATGGCTCT+GGG + chr8.1:1678416-1678435 MS.gene012661:CDS 45.0%
TATCTGTAGTGTCGCGTGTA+AGG - chr8.1:1678854-1678873 None:intergenic 45.0%
TGCAGAGAACCAAAAGCTGA+AGG + chr8.1:1677747-1677766 MS.gene012661:CDS 45.0%
TGTAATATGCGCGAGGACAA+GGG - chr8.1:1678400-1678419 None:intergenic 45.0%
TTACAGATGCACAATGGCTC+TGG + chr8.1:1678415-1678434 MS.gene012661:CDS 45.0%
TTAGACGGAGCAATTGCAAG+AGG + chr8.1:1677708-1677727 MS.gene012661:intron 45.0%
! AGTGATGATGCCTGTTGAGT+TGG - chr8.1:1679032-1679051 None:intergenic 45.0%
! GACTCGTGCTTTTCTCATAG+TGG - chr8.1:1678196-1678215 None:intergenic 45.0%
! GCTGCTACTGTGTTACTATC+TGG + chr8.1:1678708-1678727 MS.gene012661:CDS 45.0%
!! CTGTTGAGTTGGATGCAACT+GGG - chr8.1:1679021-1679040 None:intergenic 45.0%
!! GGTCAATGTCAAGTGCTGAT+GGG + chr8.1:1678730-1678749 MS.gene012661:CDS 45.0%
!! GTCAATGTCAAGTGCTGATG+GGG + chr8.1:1678731-1678750 MS.gene012661:CDS 45.0%
!! TGATTGTTCTGAGGTGTGCA+TGG - chr8.1:1678069-1678088 None:intergenic 45.0%
!! TGTACTAGTTCTGATGCGTC+TGG - chr8.1:1678105-1678124 None:intergenic 45.0%
AGGAGCAGCACCAATTATGG+AGG - chr8.1:1679111-1679130 None:intergenic 50.0%
AGGCTGTCCAAGCTGGAATT+GGG - chr8.1:1678895-1678914 None:intergenic 50.0%
ATAGGTTCAACGTTGTGCGG+AGG + chr8.1:1678596-1678615 MS.gene012661:intron 50.0%
CCAGTTGCATCCAACTCAAC+AGG + chr8.1:1679019-1679038 MS.gene012661:CDS 50.0%
CGTTCGCAAACAAGTGAGTC+TGG + chr8.1:1678445-1678464 MS.gene012661:intron 50.0%
CTGTAATATGCGCGAGGACA+AGG - chr8.1:1678401-1678420 None:intergenic 50.0%
GAAGATGATCAAAACCGCGG+CGG + chr8.1:1676891-1676910 MS.gene012661:CDS 50.0%
GAAGGCCGGAGAATTTGGAT+TGG - chr8.1:1678971-1678990 None:intergenic 50.0%
GACTCACTTGTTTGCGAACG+GGG - chr8.1:1678445-1678464 None:intergenic 50.0%
GAGCAATTGCAAGAGGAGCT+TGG + chr8.1:1677715-1677734 MS.gene012661:CDS 50.0%
GTGCATCTGTAATATGCGCG+AGG - chr8.1:1678407-1678426 None:intergenic 50.0%
TAACACAGTAGCAGCAGCTG+CGG - chr8.1:1678703-1678722 None:intergenic 50.0%
TAAGCGTGCCAAGACTGAAC+AGG + chr8.1:1677493-1677512 MS.gene012661:CDS 50.0%
TACCATGTGGGCTTCTGATC+GGG - chr8.1:1678229-1678248 None:intergenic 50.0%
TCTCCTTCCCAATTCCAGCT+TGG + chr8.1:1678885-1678904 MS.gene012661:CDS 50.0%
TGAGGAGAAAGGAGATGGTG+TGG + chr8.1:1677984-1678003 MS.gene012661:CDS 50.0%
TGATCATCCACTTCTGCTGC+TGG - chr8.1:1678033-1678052 None:intergenic 50.0%
TGTCCAAGCTGGAATTGGGA+AGG - chr8.1:1678891-1678910 None:intergenic 50.0%
TTACGTTGACATGGTCAGCG+CGG - chr8.1:1677055-1677074 None:intergenic 50.0%
! AGTTCTGATGCGTCTGGATC+AGG - chr8.1:1678099-1678118 None:intergenic 50.0%
! GGCATTGGAGGGGTTTAATC+TGG - chr8.1:1678151-1678170 None:intergenic 50.0%
!! CCTGTTGAGTTGGATGCAAC+TGG - chr8.1:1679022-1679041 None:intergenic 50.0%
!! GGGTCAATGTCAAGTGCTGA+TGG + chr8.1:1678729-1678748 MS.gene012661:CDS 50.0%
!! TTCTGAGGTGTGCATGGTTC+AGG - chr8.1:1678063-1678082 None:intergenic 50.0%
!!! AGTTTTGAGGCTGTCCAAGC+TGG - chr8.1:1678902-1678921 None:intergenic 50.0%
CACCGCGGATCCAAACTTCA+CGG + chr8.1:1679064-1679083 MS.gene012661:CDS 55.0%
CCATTGGCATAGCAGCAGGT+GGG - chr8.1:1678671-1678690 None:intergenic 55.0%
GAAGTTTGGATCCGCGGTGA+TGG - chr8.1:1679063-1679082 None:intergenic 55.0%
GAATGGTCCAGCAGCAGAAG+TGG + chr8.1:1678023-1678042 MS.gene012661:CDS 55.0%
GAGGCTGTCCAAGCTGGAAT+TGG - chr8.1:1678896-1678915 None:intergenic 55.0%
GATGCCATTGGCATAGCAGC+AGG - chr8.1:1678675-1678694 None:intergenic 55.0%
GGAGAAAGGAGATGGTGTGG+TGG + chr8.1:1677987-1678006 MS.gene012661:CDS 55.0%
GGGAGGAGCAGCACCAATTA+TGG - chr8.1:1679114-1679133 None:intergenic 55.0%
GTGTGCATGGTTCAGGCTCT+TGG - chr8.1:1678056-1678075 None:intergenic 55.0%
TCAGCGCGGAGATTGCAATG+AGG - chr8.1:1677041-1677060 None:intergenic 55.0%
TGCCGTGAAGTTTGGATCCG+CGG - chr8.1:1679069-1679088 None:intergenic 55.0%
TTACACGATTCATGCCGCCG+CGG - chr8.1:1676908-1676927 None:intergenic 55.0%
! CTTGATCAGCGGCATTGGAG+GGG - chr8.1:1678161-1678180 None:intergenic 55.0%
! GCTTGATCAGCGGCATTGGA+GGG - chr8.1:1678162-1678181 None:intergenic 55.0%
! TGCTTGATCAGCGGCATTGG+AGG - chr8.1:1678163-1678182 None:intergenic 55.0%
!! TGGTGCTGATGCTGAGAGTG+TGG - chr8.1:1678811-1678830 None:intergenic 55.0%
CCCACCTGCTGCTATGCCAA+TGG + chr8.1:1678668-1678687 MS.gene012661:CDS 60.0%
GCCATTGGCATAGCAGCAGG+TGG - chr8.1:1678672-1678691 None:intergenic 60.0%
TAGCAGCAGGTGGGAGTGGA+TGG - chr8.1:1678662-1678681 None:intergenic 60.0%
TGCCCGATCAGAAGCCCACA+TGG + chr8.1:1678224-1678243 MS.gene012661:CDS 60.0%
TGTGGGCTTCTGATCGGGCA+CGG - chr8.1:1678224-1678243 None:intergenic 60.0%
! ACTAAGTGCCGCCATCACCG+CGG + chr8.1:1679049-1679068 MS.gene012661:CDS 60.0%
! GCGAGTGCTGCCGTGAAGTT+TGG - chr8.1:1679077-1679096 None:intergenic 60.0%
! GTTTGGATCCGCGGTGATGG+CGG - chr8.1:1679060-1679079 None:intergenic 60.0%
CACAGTAGCAGCAGCTGCGG+TGG - chr8.1:1678700-1678719 None:intergenic 65.0%
GCTGCGGTGGTCGATGCCAT+TGG - chr8.1:1678687-1678706 None:intergenic 65.0%
GGCATAGCAGCAGGTGGGAG+TGG - chr8.1:1678666-1678685 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 1676822 1679187 1676822 ID=MS.gene012661
chr8.1 mRNA 1676822 1679187 1676822 ID=MS.gene012661.t1;Parent=MS.gene012661
chr8.1 exon 1676822 1677070 1676822 ID=MS.gene012661.t1.exon1;Parent=MS.gene012661.t1
chr8.1 CDS 1676822 1677070 1676822 ID=cds.MS.gene012661.t1;Parent=MS.gene012661.t1
chr8.1 exon 1677413 1677514 1677413 ID=MS.gene012661.t1.exon2;Parent=MS.gene012661.t1
chr8.1 CDS 1677413 1677514 1677413 ID=cds.MS.gene012661.t1;Parent=MS.gene012661.t1
chr8.1 exon 1677712 1677867 1677712 ID=MS.gene012661.t1.exon3;Parent=MS.gene012661.t1
chr8.1 CDS 1677712 1677867 1677712 ID=cds.MS.gene012661.t1;Parent=MS.gene012661.t1
chr8.1 exon 1677967 1678245 1677967 ID=MS.gene012661.t1.exon4;Parent=MS.gene012661.t1
chr8.1 CDS 1677967 1678245 1677967 ID=cds.MS.gene012661.t1;Parent=MS.gene012661.t1
chr8.1 exon 1678344 1678457 1678344 ID=MS.gene012661.t1.exon5;Parent=MS.gene012661.t1
chr8.1 CDS 1678344 1678457 1678344 ID=cds.MS.gene012661.t1;Parent=MS.gene012661.t1
chr8.1 exon 1678600 1679187 1678600 ID=MS.gene012661.t1.exon6;Parent=MS.gene012661.t1
chr8.1 CDS 1678600 1679187 1678600 ID=cds.MS.gene012661.t1;Parent=MS.gene012661.t1
Gene Sequence

>MS.gene012661

ATGTTAACATTTCCGACGATGAATCTAATAAGCACAAACGGAGCAACATGGTGTGATGAGAATGAAAATGAAGATGATCAAAACCGCGGCGGCATGAATCGTGTAACTATGGATGAAGTTGATTTCTTCTCAAATGATAAATCATCATCATCGCCAGAACAACTTGATGATGTTTCAATGAAGAATAATAATAATAATATTAATGAGATTTACGATCCTCATTGCAATCTCCGCGCTGACCATGTCAACGTAAGCCATTTTTTCTTTCTTTTTTATTTGATATTATTAGTTACAAAGTAGAAATATAAGGAAAATATTTGGTCCCCAAACCAAATATCTGTTTGTTTTATTCATTCACTTCGATTAATTAAAGTTAATAATAAATAAATAGATTTAATTTATATTCATTCTTTCTGAGACAGTAGATTAGTGAAATAAAAAATATTGGATGTTAATCATAATTACCTTTGAAGTGTGGTTGTGATTTGTCAGTGCAACTCAATAACAAGAAAAAGAAAATAAATGTGAAAATATTTATCATAGGGATTACGGTATATGCTAATTATTTTTTATTTGATGCAAATATTGTAGACTGGTTTACAACTCCTTATTACTAACACCGGAAGTGATCAATCAATGGTGGATGATGGAACTTCAATAAATGCTGAAGATAAGCGTGCCAAGACTGAACAGGTCAATTTCTTAATTACCATCTTAGTTTAATTTCATTTTACAGGGGTGTTCAGTCATATTAAGATTACAGTACTATTGTAATTATTTGCAAATATTCTACTTAACAAGATTATAATTTAATGAAATTTAAGTGTTATTTATTATATACACACTAAGTTAAAGTTAACAGAGATGAAATACACTTGTTAAATTTTTAGACGGAGCAATTGCAAGAGGAGCTTGGACGTGTGAATGCAGAGAACCAAAAGCTGAAGGAAATGCTGAGTGACATGAGCAGTAGCTACACAAACTTGCATAAGCGTTTTATGTCCTTAATGCAACAGCAACAAAACCAAACCACAGAACATGATCAGGTGATTAATTAATAATTATCTGCCAGTTTAAAATATCTTTATACCCGTACTTGAAATGAAATTATGAAACTGGATGGATATATGTTTTTTACATTTCAGATTGTCAAAGGAAAAGCTGAGGAGAAAGGAGATGGTGTGGTGGCTAGAAAGTTGATGAATGGTCCAGCAGCAGAAGTGGATGATCACCAAGAGCCTGAACCATGCACACCTCAGAACAATCAGAAAGAGCCTGATCCAGACGCATCAGAACTAGTACAACTTTTGGACCGAAGTCAGCTTCCCAGATTAAACCCCTCCAATGCCGCTGATCAAGCAAATGCAGAAGCCACTATGAGAAAAGCACGAGTCTCAGTCCGTGCCCGATCAGAAGCCCACATGGTATACTATATTAGTGTGCATCAATAAAGAAATCTAATTATATTATATCATTGATTGACTCCTAGCTGATTTAATTAACTAATTGATCACAATTGCAGATCAATGATGGATGCCAATGGCGAAAATATGGACAAAAAATGGCTAAAGGAAACCCTTGTCCTCGCGCATATTACAGATGCACAATGGCTCTGGGTTGCCCCGTTCGCAAACAAGTGAGTCTGGTTATTCTGATGAATCAATGTGTATAGTACTAATAGTCTAATACTAGCTACTATTGCTTCTATTTTAAAAATGTTACTCCTTTCGTCTCATAATATGCGTCTCATTTTATTTGTTTCATTTGAAATATTATAGGTTCAACGTTGTGCGGAGGACAGATCAATTTTGATAACAACATATGAAGGGACACATAGCCATCCACTCCCACCTGCTGCTATGCCAATGGCATCGACCACCGCAGCTGCTGCTACTGTGTTACTATCTGGGTCAATGTCAAGTGCTGATGGGGTGATGAACCCCAATTTACTAGCCAGAATTCTTCCTAATTGCTCTTCTAGCATGGCCACACTCTCAGCATCAGCACCATTTCCTACTGTGACACTAGACCTTACACGCGACACTACAGATAATAACGGAAATTCTCCTTCCCAATTCCAGCTTGGACAGCCTCAAAACTTTGGATCAGGACAATTACCACAAGTGATTGCACAAGCACTTTATAACCAATCCAAATTCTCCGGCCTTCAAATGTCTCAAGATGTTGGAGGCTCTTCCCAGTTGCATCCAACTCAACAGGCATCATCACTAAGTGCCGCCATCACCGCGGATCCAAACTTCACGGCAGCACTCGCAGCTGCTATCTCCTCCATAATTGGTGCTGCTCCTCCCAGCAACAATAACAGTAATCCCAATATCATCAACAGTGCTACCTACAATCAGTAG
Protein sequence

>MS.gene012661.t1

MLTFPTMNLISTNGATWCDENENEDDQNRGGMNRVTMDEVDFFSNDKSSSSPEQLDDVSMKNNNNNINEIYDPHCNLRADHVNTGLQLLITNTGSDQSMVDDGTSINAEDKRAKTEQTEQLQEELGRVNAENQKLKEMLSDMSSSYTNLHKRFMSLMQQQQNQTTEHDQIVKGKAEEKGDGVVARKLMNGPAAEVDDHQEPEPCTPQNNQKEPDPDASELVQLLDRSQLPRLNPSNAADQANAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDRSILITTYEGTHSHPLPPAAMPMASTTAAAATVLLSGSMSSADGVMNPNLLARILPNCSSSMATLSASAPFPTVTLDLTRDTTDNNGNSPSQFQLGQPQNFGSGQLPQVIAQALYNQSKFSGLQMSQDVGGSSQLHPTQQASSLSAAITADPNFTAALAAAISSIIGAAPPSNNNSNPNIINSATYNQ