AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012772

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012772.t1 MTR_0558s0020 86.486 296 39 1 1 295 1 296 0.0 543
MS.gene012772.t1 MTR_1g083640 82.042 284 35 1 1 268 1 284 6.69e-170 491
MS.gene012772.t1 MTR_8g446020 72.881 295 41 1 1 295 1 256 4.53e-150 439
MS.gene012772.t1 MTR_6g090505 82.278 237 42 0 65 301 1 237 3.14e-140 418
MS.gene012772.t1 MTR_6g090505 67.647 102 6 2 396 495 230 306 3.47e-34 135
MS.gene012772.t1 MTR_6g090505 77.551 49 11 0 567 615 314 362 9.45e-12 67.8
MS.gene012772.t1 MTR_2g014100 80.816 245 38 1 1 236 1 245 3.64e-139 411
MS.gene012772.t1 MTR_0337s0040 71.154 260 35 2 1 259 1 221 8.53e-122 365
MS.gene012772.t1 MTR_3g008240 83.251 203 33 1 1 202 1 203 9.12e-117 351
MS.gene012772.t1 MTR_4g040430 82.673 202 31 1 1 202 1 198 3.05e-116 350
MS.gene012772.t1 MTR_0337s0060 56.287 334 28 5 447 777 21 239 5.60e-106 325
MS.gene012772.t1 MTR_5g071590 73.333 180 35 2 1 167 1 180 3.47e-89 279
MS.gene012772.t1 MTR_1g055240 85.915 142 20 0 91 232 3 144 1.42e-84 265
MS.gene012772.t1 MTR_0019s0290 80.263 152 30 0 82 233 9 160 6.98e-84 264
MS.gene012772.t1 MTR_3g028680 72.781 169 25 2 618 783 1 151 2.19e-76 245
MS.gene012772.t1 MTR_2g067090 69.880 166 29 2 621 783 99 246 3.51e-67 224
MS.gene012772.t1 MTR_4g133495 57.789 199 40 3 576 771 88 245 1.39e-63 214
MS.gene012772.t1 MTR_4g133340 57.789 199 40 3 576 771 88 245 1.39e-63 214
MS.gene012772.t1 MTR_1281s0010 80.734 109 21 0 19 127 1 109 2.78e-56 188
MS.gene012772.t1 MTR_6g051425 31.761 318 186 6 40 341 22 324 4.05e-38 145
MS.gene012772.t1 MTR_4g008820 70.000 100 29 1 1 99 125 224 1.85e-31 131
MS.gene012772.t1 MTR_8g046060 77.273 88 11 2 1 79 91 178 3.65e-31 122
MS.gene012772.t1 MTR_1g070355 26.235 324 218 6 41 362 80 384 7.22e-19 91.7
MS.gene012772.t1 MTR_2g067130 62.162 74 22 2 713 783 46 116 3.55e-18 82.8
MS.gene012772.t1 MTR_0402s0040 25.946 185 118 4 49 233 40 205 3.51e-15 79.3
MS.gene012772.t1 MTR_0337s0050 75.000 36 9 0 259 294 14 49 1.66e-13 66.6
MS.gene012772.t1 MTR_4g035820 22.069 290 193 7 17 299 61 324 1.45e-12 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012772.t1 AT4G38180 27.925 641 382 14 32 665 70 637 1.80e-70 247
MS.gene012772.t1 AT4G15090 24.357 739 447 17 50 771 66 709 1.13e-58 214
MS.gene012772.t1 AT4G15090 24.357 739 447 17 50 771 66 709 1.13e-58 214
MS.gene012772.t1 AT4G15090 24.357 739 447 17 50 771 66 709 1.13e-58 214
MS.gene012772.t1 AT4G15090 24.357 739 447 17 50 771 66 709 1.13e-58 214
MS.gene012772.t1 AT4G15090 24.357 739 447 17 50 771 66 709 1.13e-58 214
MS.gene012772.t1 AT2G27110 25.854 615 364 15 127 737 108 634 3.48e-52 196
MS.gene012772.t1 AT2G27110 25.854 615 364 15 127 737 108 634 3.48e-52 196
MS.gene012772.t1 AT2G27110 26.250 560 324 13 180 737 17 489 2.23e-51 191
MS.gene012772.t1 AT3G06250 25.118 633 351 16 34 661 189 703 3.96e-51 192
MS.gene012772.t1 AT3G06250 25.118 633 351 16 34 661 189 703 3.96e-51 192
MS.gene012772.t1 AT3G06250 25.118 633 351 16 34 661 189 703 3.96e-51 192
MS.gene012772.t1 AT1G76320 24.631 678 408 19 50 711 12 602 1.19e-49 186
MS.gene012772.t1 AT1G76320 24.631 678 408 19 50 711 12 602 3.66e-49 186
MS.gene012772.t1 AT1G76320 24.112 676 414 17 50 711 12 602 3.78e-49 186
MS.gene012772.t1 AT1G76320 24.112 676 414 17 50 711 12 602 3.78e-49 186
MS.gene012772.t1 AT3G22170 23.344 634 397 14 34 662 69 618 1.68e-48 185
MS.gene012772.t1 AT3G22170 23.344 634 397 14 34 662 69 618 1.68e-48 185
MS.gene012772.t1 AT5G18960 24.575 647 360 18 24 661 200 727 3.98e-45 174
MS.gene012772.t1 AT5G18960 24.575 647 360 18 24 661 200 727 3.98e-45 174
MS.gene012772.t1 AT4G38170 25.290 431 264 11 235 662 24 399 5.73e-44 167
MS.gene012772.t1 AT1G10240 24.719 623 377 18 49 659 62 604 3.91e-42 164
MS.gene012772.t1 AT1G10240 24.719 623 377 18 49 659 62 604 3.91e-42 164
MS.gene012772.t1 AT5G28530 24.100 639 388 17 40 660 60 619 8.89e-42 163
MS.gene012772.t1 AT5G28530 23.944 639 385 18 40 660 60 615 6.17e-41 160
MS.gene012772.t1 AT5G28530 23.944 639 385 18 40 660 60 615 6.17e-41 160
MS.gene012772.t1 AT2G32250 24.340 682 388 20 4 677 10 571 1.43e-39 157
MS.gene012772.t1 AT2G32250 24.340 682 388 20 4 677 10 571 2.35e-39 157
MS.gene012772.t1 AT2G32250 24.340 682 388 20 4 677 10 571 2.35e-39 157
MS.gene012772.t1 AT2G32250 24.340 682 388 20 4 677 10 571 2.37e-39 157
MS.gene012772.t1 AT2G32250 24.340 682 388 20 4 677 10 571 2.37e-39 157
MS.gene012772.t1 AT2G32250 24.340 682 388 20 4 677 10 571 2.37e-39 157
MS.gene012772.t1 AT2G32250 24.371 636 356 18 50 677 12 530 1.94e-38 154
MS.gene012772.t1 AT2G32250 24.371 636 356 18 50 677 12 530 2.05e-38 154
MS.gene012772.t1 AT1G80010 24.043 653 373 23 41 662 101 661 4.41e-37 149
MS.gene012772.t1 AT1G52520 22.771 628 399 19 41 662 91 638 2.69e-33 137
MS.gene012772.t1 AT4G19990 28.731 268 184 4 219 483 106 369 1.77e-27 119
MS.gene012772.t1 AT4G19990 32.215 149 73 3 591 739 438 558 4.37e-11 67.0
MS.gene012772.t1 AT4G19990 28.731 268 184 4 219 483 163 426 1.86e-27 119
MS.gene012772.t1 AT4G19990 32.215 149 73 3 591 739 495 615 4.58e-11 67.0
MS.gene012772.t1 AT4G19990 28.731 268 184 4 219 483 163 426 1.96e-27 119
MS.gene012772.t1 AT4G19990 32.215 149 73 3 591 739 495 615 4.54e-11 67.0
MS.gene012772.t1 AT4G19990 28.731 268 184 4 219 483 163 426 1.96e-27 119
MS.gene012772.t1 AT4G19990 32.215 149 73 3 591 739 495 615 4.54e-11 67.0
MS.gene012772.t1 AT4G19990 28.731 268 184 4 219 483 177 440 1.98e-27 119
MS.gene012772.t1 AT4G19990 32.215 149 73 3 591 739 509 629 4.55e-11 67.0
MS.gene012772.t1 AT4G19990 28.731 268 184 4 219 483 163 426 2.34e-27 119
MS.gene012772.t1 AT4G19990 32.215 149 73 3 591 739 495 615 4.23e-11 67.0
MS.gene012772.t1 AT4G19990 28.731 268 184 4 219 483 163 426 2.34e-27 119
MS.gene012772.t1 AT4G19990 32.215 149 73 3 591 739 495 615 4.23e-11 67.0
MS.gene012772.t1 AT5G28530 21.940 629 351 20 40 660 60 556 2.24e-23 105
MS.gene012772.t1 AT5G28530 21.781 629 348 21 40 660 60 552 1.41e-22 103

Find 118 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTGAGTTGGACTTTA+AGG 0.133287 8.1:-485150 MS.gene012772:CDS
TTTCGATGAGTTAACTAATT+TGG 0.156761 8.1:-485459 MS.gene012772:CDS
AGTCGCTTCTTTGACCTAAT+TGG 0.186128 8.1:+482437 None:intergenic
CTTTAGTCATTTCAACATTA+TGG 0.194287 8.1:-485192 MS.gene012772:CDS
CAACAAGATTATGCTCTATT+TGG 0.198611 8.1:-486243 MS.gene012772:CDS
TTCATTTCAGCTGCCTTTCT+TGG 0.201003 8.1:-485740 MS.gene012772:intron
CATCGTAAGAGTGTGTTATT+TGG 0.276792 8.1:-485707 MS.gene012772:CDS
TAGTTCTTTAAGTCCGAAAA+TGG 0.277313 8.1:+486426 None:intergenic
TATGGTTTGAGGTTTCTTAT+TGG 0.280533 8.1:+485613 None:intergenic
TTCTTTGACCTAATTGGATT+TGG 0.299426 8.1:+482443 None:intergenic
AATCAGATTTCGACTACAAT+TGG 0.318540 8.1:-485418 MS.gene012772:CDS
TGTTCTTGAGGCAGGGAAAA+AGG 0.322946 8.1:-482591 MS.gene012772:CDS
GCCGATATTTATTGTTTGTT+CGG 0.341758 8.1:+486193 None:intergenic
GGTTTCGAATGTTGATGTTT+TGG 0.354913 8.1:-484895 MS.gene012772:CDS
ACTAGCCTGGTCTGTGTATA+TGG 0.360230 8.1:+485595 None:intergenic
TATGCATTGGTCTTCAGTTT+GGG 0.370760 8.1:-485318 MS.gene012772:CDS
CTCAACGGTGTTCTTGAGGC+AGG 0.386173 8.1:-482599 MS.gene012772:CDS
AACAATAAATATCGGCCATT+AGG 0.388497 8.1:-486186 MS.gene012772:intron
ACCGAACAAACAATAAATAT+CGG 0.389395 8.1:-486194 MS.gene012772:CDS
GTATGCATTGGTCTTCAGTT+TGG 0.392120 8.1:-485319 MS.gene012772:CDS
GTCTTTAGTGCCAACATTCA+TGG 0.395146 8.1:+482715 None:intergenic
GTCTTTAGTGCCAACATTCA+TGG 0.395146 8.1:+484602 None:intergenic
TTCTCATACTCAACAAGAAC+TGG 0.395633 8.1:+486723 None:intergenic
AAGAAAGACCAAATCCAATT+AGG 0.397771 8.1:-482451 MS.gene012772:intron
TTTGGTCTTTCTTTGAACTT+TGG 0.398856 8.1:+482461 None:intergenic
TTCCTTCAAATACTATTATG+AGG 0.399583 8.1:-485018 MS.gene012772:CDS
GAGGAGTTTCTTATTTCTAA+AGG 0.403538 8.1:-482566 MS.gene012772:CDS
TAAAGAATCATGGAAGTCTT+TGG 0.408500 8.1:-486952 MS.gene012772:CDS
CATGTCGTATGTTTGAGAAC+CGG 0.411671 8.1:-484770 MS.gene012772:CDS
GATTATGATCTTCAAACCTT+GGG 0.413114 8.1:+484847 None:intergenic
ATAACACTGGATTCTCTGTT+AGG 0.417808 8.1:-486881 MS.gene012772:CDS
GGGTTGTCACAGTCGACATT+AGG 0.419786 8.1:-484812 MS.gene012772:CDS
CGATTATGATCTTCAAACCT+TGG 0.425681 8.1:+484846 None:intergenic
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 8.1:-486546 MS.gene012772:CDS
AGCTGGAATATATTTGAAGT+TGG 0.433136 8.1:-486664 MS.gene012772:CDS
TGGTCTGTGTATATGGTTTG+AGG 0.447350 8.1:+485602 None:intergenic
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 8.1:-486681 MS.gene012772:CDS
CGCTTTAAAACATATTGTGC+AGG 0.447633 8.1:+484669 None:intergenic
CGTTATGCTTGTAACAAAGA+AGG 0.449439 8.1:-486798 MS.gene012772:CDS
GCTTTAATAAATTCTAAAGC+TGG 0.450264 8.1:-486516 MS.gene012772:CDS
ATCTGAGAGTGGACAATTGA+CGG 0.452529 8.1:-487027 MS.gene012772:CDS
TGGTCTTTGCTCATGGCACA+TGG 0.452802 8.1:-485528 MS.gene012772:CDS
GGCCTACTTCGGACTTTAAG+TGG 0.458978 8.1:-485364 MS.gene012772:CDS
ATGTCGTATGTTTGAGAACC+GGG 0.461344 8.1:-484769 MS.gene012772:CDS
GAAGCGATGGGTCAAGGAGC+TGG 0.466940 8.1:-486471 MS.gene012772:CDS
TTTAAGTCCGAAAATGGAAA+AGG 0.468117 8.1:+486432 None:intergenic
ACAAAATAAGAAATCGGATA+AGG 0.469178 8.1:-486832 MS.gene012772:CDS
CTCCTCATAATAGTATTTGA+AGG 0.485089 8.1:+485016 None:intergenic
TTACAACCAACCCTTTCCTC+TGG 0.485330 8.1:+486687 None:intergenic
TTTAATTATGCATATAACAC+TGG 0.485542 8.1:-486894 MS.gene012772:CDS
TCTAATGACAACTCGTCAAA+AGG 0.488137 8.1:-486403 MS.gene012772:CDS
CTCAAGTAGCACAAATGCTC+TGG 0.489977 8.1:+486576 None:intergenic
CAATTCACAAAATAAGAAAT+CGG 0.490263 8.1:-486838 MS.gene012772:CDS
TATGAGGAGGACACAACAAA+AGG 0.490908 8.1:-485002 MS.gene012772:CDS
ATGATTGTCAAAACCAAGAA+AGG 0.491378 8.1:+485727 None:intergenic
CTGTCTATGAACCATCTGTT+GGG 0.491412 8.1:-482490 MS.gene012772:CDS
ATCAGATTTCGACTACAATT+GGG 0.491708 8.1:-485417 MS.gene012772:CDS
CGTCAAAAGGAGATGGTGGC+TGG 0.492100 8.1:-486390 MS.gene012772:CDS
ACATTATGGTTCAGAGAATG+AGG 0.494022 8.1:-485178 MS.gene012772:CDS
GACCGCATAAGCTGACTGTT+GGG 0.496307 8.1:+485098 None:intergenic
TGTCTTCTGCAGCATCAACT+TGG 0.502977 8.1:+486298 None:intergenic
AAATGCTCTGGTTTATGTAA+TGG 0.504865 8.1:+486588 None:intergenic
CTCATTCAAATCGTATGCAT+TGG 0.507227 8.1:-485331 MS.gene012772:CDS
ATCATAATCGACTTGATGAA+AGG 0.507955 8.1:-484833 MS.gene012772:CDS
GAGGGATAATCATGCTGAGT+TGG 0.508852 8.1:-485159 MS.gene012772:CDS
ATTGGTCTTCAGTTTGGGTG+AGG 0.509410 8.1:-485313 MS.gene012772:CDS
TGTCTATAAGATATATAAGT+GGG 0.514682 8.1:-486628 MS.gene012772:CDS
GATCTTCAAACCTTGGGGAA+AGG 0.519004 8.1:+484853 None:intergenic
TAAAGAATCGAACAAGTGAA+TGG 0.519618 8.1:+485210 None:intergenic
TCATAATCGACTTGATGAAA+GGG 0.526860 8.1:-484832 MS.gene012772:CDS
CATAATAGTATTTGAAGGAA+AGG 0.529686 8.1:+485021 None:intergenic
ACTTCAACAACGCACTAGCC+TGG 0.534735 8.1:+485582 None:intergenic
GAGAACATCTTATGAAGCGA+TGG 0.538371 8.1:-486484 MS.gene012772:CDS
TAACAAAGAAGGTTTCAAGA+AGG 0.538422 8.1:-486787 MS.gene012772:CDS
AATCGAACAAGTGAATGGTC+TGG 0.540971 8.1:+485215 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 8.1:-485001 MS.gene012772:CDS
AACAAAGAAGGTTTCAAGAA+GGG 0.545537 8.1:-486786 MS.gene012772:CDS
TCTTATGAAGCGATGGGTCA+AGG 0.545849 8.1:-486477 MS.gene012772:CDS
CATTTAGTGATAAAGAATCA+TGG 0.546005 8.1:-486962 MS.gene012772:CDS
CTGAAATCCACCATGAATGT+TGG 0.557140 8.1:-482725 MS.gene012772:CDS
AATGAAGCTCTCTCGAAACC+AGG 0.565261 8.1:-486336 MS.gene012772:CDS
TGAAAATTCAGTTATTGATG+CGG 0.565546 8.1:-487003 MS.gene012772:CDS
GCTGTCTATGAACCATCTGT+TGG 0.568181 8.1:-482491 MS.gene012772:CDS
TACACGTGTTTGCGCAGATG+CGG 0.571672 8.1:-482639 MS.gene012772:CDS
ATGTCTATAAGATATATAAG+TGG 0.572287 8.1:-486629 MS.gene012772:CDS
GGGTCAAGGAGCTGGAGGCA+CGG 0.578030 8.1:-486463 MS.gene012772:CDS
GGACCGCATAAGCTGACTGT+TGG 0.579264 8.1:+485097 None:intergenic
TTTGGTGCAGTCCCAACAGA+TGG 0.581566 8.1:+482479 None:intergenic
TGGTGTATACTTGTTTACTA+CGG 0.585960 8.1:+485076 None:intergenic
ATATTAACTTCATCTGAGAG+TGG 0.588105 8.1:-487038 MS.gene012772:CDS
TCAACGGTGTTCTTGAGGCA+GGG 0.590097 8.1:-482598 MS.gene012772:CDS
ATTTCTCAACGGTGTTCTTG+AGG 0.591378 8.1:-482603 MS.gene012772:CDS
TTGAAGAAAACCTTTCCCCA+AGG 0.594796 8.1:-484863 MS.gene012772:CDS
TGAAGACTTAGAAGGCGTAA+CGG 0.598405 8.1:+482523 None:intergenic
GACAACTCGTCAAAAGGAGA+TGG 0.599038 8.1:-486397 MS.gene012772:CDS
TTGATATCGTTGTGCTTGAG+TGG 0.601464 8.1:+482691 None:intergenic
AACTCGTCAAAAGGAGATGG+TGG 0.603142 8.1:-486394 MS.gene012772:CDS
ACGTGTTTGCGCAGATGCGG+AGG 0.605934 8.1:-482636 MS.gene012772:CDS
ATCCCAACAGTCAGCTTATG+CGG 0.606153 8.1:-485100 MS.gene012772:CDS
CTTCAAATACTATTATGAGG+AGG 0.607664 8.1:-485015 MS.gene012772:CDS
AGAACTGGACTGTCACATGT+TGG 0.620791 8.1:+486738 None:intergenic
AGAACATCTTATGAAGCGAT+GGG 0.621635 8.1:-486483 MS.gene012772:CDS
AGCCACTTAAAGTCCGAAGT+AGG 0.621799 8.1:+485362 None:intergenic
ATTATGATCTTCAAACCTTG+GGG 0.630358 8.1:+484848 None:intergenic
GGTCTTTGCTCATGGCACAT+GGG 0.639768 8.1:-485527 MS.gene012772:CDS
TTTAGTGCCAACATTCATGG+TGG 0.641441 8.1:+482718 None:intergenic
TTTAGTGCCAACATTCATGG+TGG 0.641441 8.1:+484605 None:intergenic
CATTATGGTTCAGAGAATGA+GGG 0.643278 8.1:-485177 MS.gene012772:CDS
GATTTCAGCTTATCGACAGA+CGG 0.644926 8.1:+482740 None:intergenic
GATTTCAGCTTATCGACAGA+CGG 0.644926 8.1:+484627 None:intergenic
TGAATAAATGAAAAGCAAGA+TGG 0.655697 8.1:+485056 None:intergenic
GCATCTGAAATATTTCTCAA+CGG 0.661104 8.1:-482614 MS.gene012772:CDS
CATGTCGACATAAGAAACCC+CGG 0.663279 8.1:+484751 None:intergenic
TGTCGTATGTTTGAGAACCG+GGG 0.673760 8.1:-484768 MS.gene012772:CDS
GCGATGGGTCAAGGAGCTGG+AGG 0.680061 8.1:-486468 MS.gene012772:CDS
ATGTTGATAATGATAATGAG+AGG 0.683310 8.1:-484917 MS.gene012772:CDS
TCAAACCATATACACAGACC+AGG 0.683597 8.1:-485600 MS.gene012772:CDS
TGTTGATAATGATAATGAGA+GGG 0.689129 8.1:-484916 MS.gene012772:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAATTAAATAAAA+AGG - chr8.1:486518-486537 MS.gene012772:CDS 0.0%
!! AAAATAATTAAATAAAAAGG+AGG - chr8.1:486521-486540 MS.gene012772:CDS 10.0%
!! AAATAATTAAATAAAAAGGA+GGG - chr8.1:486522-486541 MS.gene012772:CDS 10.0%
!! AAATAACATATCAACATTAA+AGG - chr8.1:485564-485583 MS.gene012772:CDS 15.0%
!! AATAACATATCAACATTAAA+GGG - chr8.1:485565-485584 MS.gene012772:CDS 15.0%
!! TTTCAATATAATTAAGTGTA+TGG + chr8.1:486157-486176 None:intergenic 15.0%
!!! TGATTTATTTTAAATATGTG+AGG + chr8.1:486478-486497 None:intergenic 15.0%
!! AGAAAGAAGAATAAGTTATT+GGG + chr8.1:486371-486390 None:intergenic 20.0%
!! ATGTCTATAAGATATATAAG+TGG - chr8.1:482753-482772 MS.gene012772:CDS 20.0%
!! ATTATTAGTGTAAGTAGAAT+TGG + chr8.1:486404-486423 None:intergenic 20.0%
!! CAATTCACAAAATAAGAAAT+CGG - chr8.1:482544-482563 MS.gene012772:CDS 20.0%
!! CTTATACAATTCCATTAAAA+TGG - chr8.1:485437-485456 MS.gene012772:CDS 20.0%
!! GAATTGAATTTAACATGATT+AGG + chr8.1:486128-486147 None:intergenic 20.0%
!! GATCTTATAAGTAAGAAAAA+TGG + chr8.1:485706-485725 None:intergenic 20.0%
!! TAGAAAGAAGAATAAGTTAT+TGG + chr8.1:486372-486391 None:intergenic 20.0%
!! TGTCTATAAGATATATAAGT+GGG - chr8.1:482754-482773 MS.gene012772:CDS 20.0%
!! TTTAATTATGCATATAACAC+TGG - chr8.1:482488-482507 MS.gene012772:CDS 20.0%
!!! AATTTAATGTTCTGGTTTAT+GGG - chr8.1:483371-483390 MS.gene012772:intron 20.0%
!!! ATGATGAAAAACTGTTTTAA+TGG - chr8.1:483993-484012 MS.gene012772:intron 20.0%
!!! TCAATCTAACATTTTTTTCA+TGG - chr8.1:486048-486067 MS.gene012772:intron 20.0%
!!! TGAATGTTTATATTGATTGA+AGG - chr8.1:483343-483362 MS.gene012772:intron 20.0%
! AAAACACCTTGAAAAACATT+CGG + chr8.1:483831-483850 None:intergenic 25.0%
! ACAAAATAAGAAATCGGATA+AGG - chr8.1:482550-482569 MS.gene012772:CDS 25.0%
! ACCGAACAAACAATAAATAT+CGG - chr8.1:483188-483207 MS.gene012772:intron 25.0%
! AGTAAGAAAAATGGTTGTTT+AGG + chr8.1:485697-485716 None:intergenic 25.0%
! AGTACAAAATACTAACCTAA+TGG + chr8.1:483214-483233 None:intergenic 25.0%
! CATAATAGTATTTGAAGGAA+AGG + chr8.1:484364-484383 None:intergenic 25.0%
! CATTTAGTGATAAAGAATCA+TGG - chr8.1:482420-482439 MS.gene012772:intron 25.0%
! CTTTAGTCATTTCAACATTA+TGG - chr8.1:484190-484209 MS.gene012772:intron 25.0%
! GATTTCAGAAAAACTATCTA+AGG + chr8.1:486196-486215 None:intergenic 25.0%
! GTTGAATATATGATGATACT+TGG + chr8.1:484886-484905 None:intergenic 25.0%
! TAAATAGATTTAGGAAGAGT+GGG + chr8.1:486346-486365 None:intergenic 25.0%
! TCATGGTTTAATCATCAAAT+CGG - chr8.1:486065-486084 MS.gene012772:intron 25.0%
! TGAAAATTCAGTTATTGATG+CGG - chr8.1:482379-482398 MS.gene012772:intron 25.0%
! TGAAATTTGAATGAATGTTC+TGG - chr8.1:483261-483280 MS.gene012772:intron 25.0%
! TGAATAAATGAAAAGCAAGA+TGG + chr8.1:484329-484348 None:intergenic 25.0%
! TTCCTTCAAATACTATTATG+AGG - chr8.1:484364-484383 MS.gene012772:intron 25.0%
! TTTCGATGAGTTAACTAATT+TGG - chr8.1:483923-483942 MS.gene012772:intron 25.0%
!! AGAAAAACTATCTAAGGTAA+GGG + chr8.1:486190-486209 None:intergenic 25.0%
!! AGGTTTAGAATTTAATGTTC+TGG - chr8.1:483363-483382 MS.gene012772:intron 25.0%
!! CAAAGTTTTCACAATTGAAA+AGG - chr8.1:484424-484443 MS.gene012772:intron 25.0%
!! TAAGAAGTTGTCCATTTTAA+TGG + chr8.1:485451-485470 None:intergenic 25.0%
!! TGTTGTATTTTGTTCTGATT+TGG - chr8.1:483619-483638 MS.gene012772:intron 25.0%
!!! AGTTGTGATTTTTAAGTTTC+TGG + chr8.1:485942-485961 None:intergenic 25.0%
!!! ATGTTGATAATGATAATGAG+AGG - chr8.1:484465-484484 MS.gene012772:intron 25.0%
!!! CTTATTTTGTGAATTGTTCT+TGG + chr8.1:482540-482559 None:intergenic 25.0%
!!! GAATTTAATGTTCTGGTTTA+TGG - chr8.1:483370-483389 MS.gene012772:intron 25.0%
!!! GCTTTAATAAATTCTAAAGC+TGG - chr8.1:482866-482885 MS.gene012772:intron 25.0%
!!! TGAAAAACTGTTTTAATGGA+AGG - chr8.1:483997-484016 MS.gene012772:intron 25.0%
!!! TGTTGATAATGATAATGAGA+GGG - chr8.1:484466-484485 MS.gene012772:intron 25.0%
AAACACATATGATCTTTCCA+TGG + chr8.1:483434-483453 None:intergenic 30.0%
AACAAAGAAGGTTTCAAGAA+GGG - chr8.1:482596-482615 MS.gene012772:CDS 30.0%
AACAATAAATATCGGCCATT+AGG - chr8.1:483196-483215 MS.gene012772:intron 30.0%
AAGAAAGACCAAATCCAATT+AGG - chr8.1:486931-486950 MS.gene012772:CDS 30.0%
AATCAGATTTCGACTACAAT+TGG - chr8.1:483964-483983 MS.gene012772:intron 30.0%
ATATTAACTTCATCTGAGAG+TGG - chr8.1:482344-482363 MS.gene012772:intron 30.0%
ATCAGATTTCGACTACAATT+GGG - chr8.1:483965-483984 MS.gene012772:intron 30.0%
ATGATTGTCAAAACCAAGAA+AGG + chr8.1:483658-483677 None:intergenic 30.0%
ATTAGTGTAAGTAGAATTGG+AGG + chr8.1:486401-486420 None:intergenic 30.0%
ATTATGATCTTCAAACCTTG+GGG + chr8.1:484537-484556 None:intergenic 30.0%
CAACAAGATTATGCTCTATT+TGG - chr8.1:483139-483158 MS.gene012772:intron 30.0%
CACTCTTCCTAAATCTATTT+AGG - chr8.1:486345-486364 MS.gene012772:CDS 30.0%
CATAAATTCCAAGGTAAGAT+AGG + chr8.1:483401-483420 None:intergenic 30.0%
CTAAATAGATTTAGGAAGAG+TGG + chr8.1:486347-486366 None:intergenic 30.0%
CTCCTCATAATAGTATTTGA+AGG + chr8.1:484369-484388 None:intergenic 30.0%
CTGGTATATGTGTGTTAATT+TGG - chr8.1:483300-483319 MS.gene012772:intron 30.0%
CTTCAAATACTATTATGAGG+AGG - chr8.1:484367-484386 MS.gene012772:intron 30.0%
GAGAATGCAAAGAAAAATCT+CGG - chr8.1:483879-483898 MS.gene012772:intron 30.0%
GATGAAAGAATCATGAAGAT+AGG + chr8.1:485970-485989 None:intergenic 30.0%
GATTATGATCTTCAAACCTT+GGG + chr8.1:484538-484557 None:intergenic 30.0%
GCCGATATTTATTGTTTGTT+CGG + chr8.1:483192-483211 None:intergenic 30.0%
TAAAGAAAAACCAGAGGAAA+GGG - chr8.1:482685-482704 MS.gene012772:CDS 30.0%
TAAAGAATCATGGAAGTCTT+TGG - chr8.1:482430-482449 MS.gene012772:intron 30.0%
TAAAGAATCGAACAAGTGAA+TGG + chr8.1:484175-484194 None:intergenic 30.0%
TAACAAAGAAGGTTTCAAGA+AGG - chr8.1:482595-482614 MS.gene012772:CDS 30.0%
TAGTTCTTTAAGTCCGAAAA+TGG + chr8.1:482959-482978 None:intergenic 30.0%
TATTGGGCCTAAATAGATTT+AGG + chr8.1:486355-486374 None:intergenic 30.0%
TCATGATTCTTTCATCCATA+TGG - chr8.1:485974-485993 MS.gene012772:intron 30.0%
TGGATATCATAGTAAAAACC+TGG + chr8.1:483067-483086 None:intergenic 30.0%
TGGTGTATACTTGTTTACTA+CGG + chr8.1:484309-484328 None:intergenic 30.0%
TTCTTTGACCTAATTGGATT+TGG + chr8.1:486942-486961 None:intergenic 30.0%
TTTAAGTCCGAAAATGGAAA+AGG + chr8.1:482953-482972 None:intergenic 30.0%
TTTCTATTTACACAGCACAA+TGG - chr8.1:483578-483597 MS.gene012772:intron 30.0%
TTTGGTGAGAATTGAGATTA+GGG + chr8.1:486099-486118 None:intergenic 30.0%
! AAATGCTCTGGTTTATGTAA+TGG + chr8.1:482797-482816 None:intergenic 30.0%
! AGCTGGAATATATTTGAAGT+TGG - chr8.1:482718-482737 MS.gene012772:CDS 30.0%
! CAGAAAAACTATCTAAGGTA+AGG + chr8.1:486191-486210 None:intergenic 30.0%
! GAATCTTCCTTTTCCATTTT+CGG - chr8.1:482943-482962 MS.gene012772:intron 30.0%
! GCATCTGAAATATTTCTCAA+CGG - chr8.1:486768-486787 MS.gene012772:CDS 30.0%
! TATGGTTTGAGGTTTCTTAT+TGG + chr8.1:483772-483791 None:intergenic 30.0%
! TCAATTCCGAATGTTTTTCA+AGG - chr8.1:483822-483841 MS.gene012772:intron 30.0%
! TTTGGTCTTTCTTTGAACTT+TGG + chr8.1:486924-486943 None:intergenic 30.0%
! TTTTGGTGAGAATTGAGATT+AGG + chr8.1:486100-486119 None:intergenic 30.0%
!! ACATGTTTTCAAGATTTTGG+AGG - chr8.1:484649-484668 MS.gene012772:CDS 30.0%
!! ATCATAATCGACTTGATGAA+AGG - chr8.1:484549-484568 MS.gene012772:intron 30.0%
!! ATGTTCTGGTTTAGAATTGA+AGG - chr8.1:483275-483294 MS.gene012772:intron 30.0%
!! GAGGAGTTTCTTATTTCTAA+AGG - chr8.1:486816-486835 MS.gene012772:CDS 30.0%
!! TCATAATCGACTTGATGAAA+GGG - chr8.1:484550-484569 MS.gene012772:intron 30.0%
!! TCGACATGTTTTCAAGATTT+TGG - chr8.1:484646-484665 MS.gene012772:CDS 30.0%
!! TTTTACGTTAAACCGCTTTT+TGG + chr8.1:486286-486305 None:intergenic 30.0%
!!! AACATGATTAGGTTGAGTTT+TGG + chr8.1:486117-486136 None:intergenic 30.0%
!!! AAGACATAGCCAGTATTTTT+TGG - chr8.1:483101-483120 MS.gene012772:intron 30.0%
!!! AGACATAGCCAGTATTTTTT+GGG - chr8.1:483102-483121 MS.gene012772:intron 30.0%
!!! CTGCACAATATGTTTTAAAG+CGG - chr8.1:484714-484733 MS.gene012772:CDS 30.0%
!!! GTTTTTCAAGGTGTTTTTCA+TGG - chr8.1:483834-483853 MS.gene012772:intron 30.0%
AACACCCTAGACAATATCTA+AGG - chr8.1:486006-486025 MS.gene012772:intron 35.0%
ACAGACCTTAGATATTGTCT+AGG + chr8.1:486014-486033 None:intergenic 35.0%
ACATTATGGTTCAGAGAATG+AGG - chr8.1:484204-484223 MS.gene012772:intron 35.0%
AGAACATCTTATGAAGCGAT+GGG - chr8.1:482899-482918 MS.gene012772:intron 35.0%
AGTTGTCTAAGTTGTTGATG+AGG + chr8.1:485177-485196 None:intergenic 35.0%
ATAACACTGGATTCTCTGTT+AGG - chr8.1:482501-482520 MS.gene012772:CDS 35.0%
CAGACCTTAGATATTGTCTA+GGG + chr8.1:486013-486032 None:intergenic 35.0%
CATTATGGTTCAGAGAATGA+GGG - chr8.1:484205-484224 MS.gene012772:intron 35.0%
CGAGAAGTAAATGAAGTTCA+AGG - chr8.1:482836-482855 MS.gene012772:intron 35.0%
CGATTATGATCTTCAAACCT+TGG + chr8.1:484539-484558 None:intergenic 35.0%
CGTTATGCTTGTAACAAAGA+AGG - chr8.1:482584-482603 MS.gene012772:CDS 35.0%
CTAAAGAAAAACCAGAGGAA+AGG - chr8.1:482684-482703 MS.gene012772:CDS 35.0%
CTCATTCAAATCGTATGCAT+TGG - chr8.1:484051-484070 MS.gene012772:intron 35.0%
GAAAGCTAAAGAAAAACCAG+AGG - chr8.1:482679-482698 MS.gene012772:CDS 35.0%
GAGAGAAATTCCTTATAGCT+CGG - chr8.1:486997-487016 MS.gene012772:CDS 35.0%
GGTGTTAATTAGATGCCATA+TGG + chr8.1:485992-486011 None:intergenic 35.0%
GTCTGCTTAATCCTAAAAAC+AGG - chr8.1:482621-482640 MS.gene012772:CDS 35.0%
TAAGGTCATAAAGAACCTGT+CGG - chr8.1:485344-485363 MS.gene012772:CDS 35.0%
TAAGTGATGTTCGATGATGA+TGG + chr8.1:485041-485060 None:intergenic 35.0%
TCAAGACAGTTAACAGTCAA+CGG - chr8.1:485503-485522 MS.gene012772:CDS 35.0%
TCACAACTCTAAATGCAACT+TGG - chr8.1:485398-485417 MS.gene012772:CDS 35.0%
TCTAATGACAACTCGTCAAA+AGG - chr8.1:482979-482998 MS.gene012772:intron 35.0%
TCTCATCTTTCTCCAAAAAG+CGG - chr8.1:486271-486290 MS.gene012772:CDS 35.0%
TGTACAGAGCATAAATTCCA+AGG + chr8.1:483410-483429 None:intergenic 35.0%
TGTATAAGATGTTCACGTTG+TGG + chr8.1:485425-485444 None:intergenic 35.0%
TGTCTTGAAGTTTCATGAGT+CGG + chr8.1:485491-485510 None:intergenic 35.0%
TTCTCATACTCAACAAGAAC+TGG + chr8.1:482662-482681 None:intergenic 35.0%
TTCTTTATGACCTTAGCGAT+GGG + chr8.1:485339-485358 None:intergenic 35.0%
TTTGGAGAAAGATGAGAAAG+AGG + chr8.1:486268-486287 None:intergenic 35.0%
! CATCGTAAGAGTGTGTTATT+TGG - chr8.1:483675-483694 MS.gene012772:intron 35.0%
! CGAGGCTTTAACAATTTAAG+CGG - chr8.1:487040-487059 MS.gene012772:CDS 35.0%
! GAGGCTTTAACAATTTAAGC+GGG - chr8.1:487041-487060 MS.gene012772:CDS 35.0%
! GGTTTCGAATGTTGATGTTT+TGG - chr8.1:484487-484506 MS.gene012772:intron 35.0%
! TCTTTCAATGCTTTTCTTCG+TGG - chr8.1:484134-484153 MS.gene012772:intron 35.0%
! TGGTTTAGAATTGAAGGTTC+TGG - chr8.1:483281-483300 MS.gene012772:intron 35.0%
! TTTTAATGGAAGGCCTACTT+CGG - chr8.1:484007-484026 MS.gene012772:intron 35.0%
! TTTTTCATGGTCTTTGCTCA+TGG - chr8.1:483847-483866 MS.gene012772:intron 35.0%
!! ACTGCTTTTGAAGACTTAGA+AGG + chr8.1:486870-486889 None:intergenic 35.0%
!! CGCTTTAAAACATATTGTGC+AGG + chr8.1:484716-484735 None:intergenic 35.0%
!! TATGCATTGGTCTTCAGTTT+GGG - chr8.1:484064-484083 MS.gene012772:intron 35.0%
!! TTCAAGATTTTGGAGGTCTT+AGG - chr8.1:484656-484675 MS.gene012772:CDS 35.0%
!!! AGACATCAGCTACTTTTGAT+TGG - chr8.1:483718-483737 MS.gene012772:intron 35.0%
!!! CACAATATGTTTTAAAGCGG+TGG - chr8.1:484717-484736 MS.gene012772:CDS 35.0%
AAATATGACCTTAGCGAAGG+GGG + chr8.1:485254-485273 None:intergenic 40.0%
AAGGTCATAAAGAACCTGTC+GGG - chr8.1:485345-485364 MS.gene012772:CDS 40.0%
AAGGTCATATTTGGACCTGT+CGG - chr8.1:485262-485281 MS.gene012772:CDS 40.0%
AATCGAACAAGTGAATGGTC+TGG + chr8.1:484170-484189 None:intergenic 40.0%
ACCTATGATCTTTGCATAGC+TGG + chr8.1:483528-483547 None:intergenic 40.0%
AGACAACTTCATCATGCATG+TGG - chr8.1:485210-485229 MS.gene012772:CDS 40.0%
AGTCGCTTCTTTGACCTAAT+TGG + chr8.1:486948-486967 None:intergenic 40.0%
ATCTGAGAGTGGACAATTGA+CGG - chr8.1:482355-482374 MS.gene012772:intron 40.0%
ATGAGGAGGACACAACAAAA+GGG - chr8.1:484381-484400 MS.gene012772:intron 40.0%
ATGTCGTATGTTTGAGAACC+GGG - chr8.1:484613-484632 MS.gene012772:intron 40.0%
ATTTATGCTCTGTACAGCCA+TGG - chr8.1:483414-483433 MS.gene012772:intron 40.0%
ATTTCTCAACGGTGTTCTTG+AGG - chr8.1:486779-486798 MS.gene012772:CDS 40.0%
CAAATATGACCTTAGCGAAG+GGG + chr8.1:485255-485274 None:intergenic 40.0%
CATGTCGTATGTTTGAGAAC+CGG - chr8.1:484612-484631 MS.gene012772:intron 40.0%
CCAAATATGACCTTAGCGAA+GGG + chr8.1:485256-485275 None:intergenic 40.0%
CTGAAATCCACCATGAATGT+TGG - chr8.1:484770-484789 MS.gene012772:CDS 40.0%
CTGTCTATGAACCATCTGTT+GGG - chr8.1:486892-486911 MS.gene012772:CDS 40.0%
GAAGCAAAAGAAAGATGACG+AGG - chr8.1:487022-487041 MS.gene012772:CDS 40.0%
GAGAACATCTTATGAAGCGA+TGG - chr8.1:482898-482917 MS.gene012772:intron 40.0%
GATACTTTCAGAAGTTCCAG+AGG + chr8.1:485675-485694 None:intergenic 40.0%
GATTTCAGCTTATCGACAGA+CGG + chr8.1:484758-484777 None:intergenic 40.0%
GTCTTTAGTGCCAACATTCA+TGG + chr8.1:484783-484802 None:intergenic 40.0%
GTTCTTTATGACCTTAGCGA+TGG + chr8.1:485340-485359 None:intergenic 40.0%
GTTTAGGTGACTGAGATTAG+TGG + chr8.1:485649-485668 None:intergenic 40.0%
TATGAGGAGGACACAACAAA+AGG - chr8.1:484380-484399 MS.gene012772:intron 40.0%
TCAAACCATATACACAGACC+AGG - chr8.1:483782-483801 MS.gene012772:intron 40.0%
TCCAAATATGACCTTAGCGA+AGG + chr8.1:485257-485276 None:intergenic 40.0%
TCCAGCTATGCAAAGATCAT+AGG - chr8.1:483524-483543 MS.gene012772:intron 40.0%
TCCATCTGCCCAAAAAATAC+TGG + chr8.1:483113-483132 None:intergenic 40.0%
TCCTTTATGACCTTAGCGAT+GGG + chr8.1:485298-485317 None:intergenic 40.0%
TCTTTATGACCTTAGCGATG+GGG + chr8.1:485338-485357 None:intergenic 40.0%
TGGTCTGTGTATATGGTTTG+AGG + chr8.1:483783-483802 None:intergenic 40.0%
TTCATTTCAGCTGCCTTTCT+TGG - chr8.1:483642-483661 MS.gene012772:intron 40.0%
TTGAAGAAAACCTTTCCCCA+AGG - chr8.1:484519-484538 MS.gene012772:intron 40.0%
TTGATATCGTTGTGCTTGAG+TGG + chr8.1:486694-486713 None:intergenic 40.0%
TTTAGTGCCAACATTCATGG+TGG + chr8.1:484780-484799 None:intergenic 40.0%
TTTGCTTCTTCCGAGCTATA+AGG + chr8.1:487010-487029 None:intergenic 40.0%
! GGTTGTCTAAGTTGTTGTTG+AGG + chr8.1:485156-485175 None:intergenic 40.0%
! TCATGCTGAGTTGGACTTTA+AGG - chr8.1:484232-484251 MS.gene012772:intron 40.0%
! TGAAGACTTAGAAGGCGTAA+CGG + chr8.1:486862-486881 None:intergenic 40.0%
! TTGTTTTCGTTGTGCTTGAG+TGG + chr8.1:484807-484826 None:intergenic 40.0%
!! AAGATTTTGGAGGTCTTAGG+TGG - chr8.1:484659-484678 MS.gene012772:CDS 40.0%
!! GTATGCATTGGTCTTCAGTT+TGG - chr8.1:484063-484082 MS.gene012772:intron 40.0%
!! TAAAAAGGAGGGCGTTACAT+TGG - chr8.1:486533-486552 MS.gene012772:CDS 40.0%
!! TCACATGTTGGCCTGTTTTT+AGG + chr8.1:482635-482654 None:intergenic 40.0%
AACTCGTCAAAAGGAGATGG+TGG - chr8.1:482988-483007 MS.gene012772:intron 45.0%
AATGAAGCTCTCTCGAAACC+AGG - chr8.1:483046-483065 MS.gene012772:intron 45.0%
ACTAACAACCTAACTCGCAG+TGG - chr8.1:485775-485794 MS.gene012772:intron 45.0%
AGAACTGGACTGTCACATGT+TGG + chr8.1:482647-482666 None:intergenic 45.0%
AGCCACTTAAAGTCCGAAGT+AGG + chr8.1:484023-484042 None:intergenic 45.0%
AGGTCATATTTGGACCTGTC+GGG - chr8.1:485263-485282 MS.gene012772:CDS 45.0%
ATCCCAACAGTCAGCTTATG+CGG - chr8.1:484282-484301 MS.gene012772:intron 45.0%
ATGTTGCATAGTCAGCGATG+GGG + chr8.1:485379-485398 None:intergenic 45.0%
CATGTCGACATAAGAAACCC+CGG + chr8.1:484634-484653 None:intergenic 45.0%
CCCTTCGCTAAGGTCATATT+TGG - chr8.1:485253-485272 MS.gene012772:CDS 45.0%
CCTTTATGACCTTAGCGATG+GGG + chr8.1:485297-485316 None:intergenic 45.0%
CTCAAGTAGCACAAATGCTC+TGG + chr8.1:482809-482828 None:intergenic 45.0%
CTTTATGACCTTAGCGATGG+GGG + chr8.1:485296-485315 None:intergenic 45.0%
GAAAAACCAGAGGAAAGGGT+TGG - chr8.1:482689-482708 MS.gene012772:CDS 45.0%
GAAGTTCCAGAGGTCTGTTT+AGG + chr8.1:485665-485684 None:intergenic 45.0%
GACAACTCGTCAAAAGGAGA+TGG - chr8.1:482985-483004 MS.gene012772:intron 45.0%
GAGGGATAATCATGCTGAGT+TGG - chr8.1:484223-484242 MS.gene012772:intron 45.0%
GATCTTCAAACCTTGGGGAA+AGG + chr8.1:484532-484551 None:intergenic 45.0%
GATGTTGCATAGTCAGCGAT+GGG + chr8.1:485380-485399 None:intergenic 45.0%
GCTGTCTATGAACCATCTGT+TGG - chr8.1:486891-486910 MS.gene012772:CDS 45.0%
GTCCTTTATGACCTTAGCGA+TGG + chr8.1:485299-485318 None:intergenic 45.0%
GTTACATTGGAGGTCTTAGG+TGG - chr8.1:486546-486565 MS.gene012772:CDS 45.0%
TCTTATGAAGCGATGGGTCA+AGG - chr8.1:482905-482924 MS.gene012772:intron 45.0%
TGATGTTGCATAGTCAGCGA+TGG + chr8.1:485381-485400 None:intergenic 45.0%
TGGGTGATCCTATCTTACCT+TGG - chr8.1:483390-483409 MS.gene012772:intron 45.0%
TGTCGTATGTTTGAGAACCG+GGG - chr8.1:484614-484633 MS.gene012772:intron 45.0%
TGTCTTCTGCAGCATCAACT+TGG + chr8.1:483087-483106 None:intergenic 45.0%
TGTTCTTGAGGCAGGGAAAA+AGG - chr8.1:486791-486810 MS.gene012772:CDS 45.0%
TTACAACCAACCCTTTCCTC+TGG + chr8.1:482698-482717 None:intergenic 45.0%
! ACTAGCCTGGTCTGTGTATA+TGG + chr8.1:483790-483809 None:intergenic 45.0%
! GATCGCATCGGGACAATTTT+GGG - chr8.1:485750-485769 MS.gene012772:intron 45.0%
! GTGAGGTCACATTTTACAGC+TGG - chr8.1:484086-484105 MS.gene012772:intron 45.0%
!! ATTGGTCTTCAGTTTGGGTG+AGG - chr8.1:484069-484088 MS.gene012772:intron 45.0%
!! GAAAGGGTTGGTTGTAAAGC+TGG - chr8.1:482701-482720 MS.gene012772:CDS 45.0%
!!! GCCAGTATTTTTTGGGCAGA+TGG - chr8.1:483109-483128 MS.gene012772:intron 45.0%
AAGCAGCGTTCTTCGTTCCT+AGG - chr8.1:486218-486237 MS.gene012772:CDS 50.0%
ACTTCAACAACGCACTAGCC+TGG + chr8.1:483803-483822 None:intergenic 50.0%
AGAGAGAGAGAGAGAACCCT+AGG + chr8.1:486238-486257 None:intergenic 50.0%
AGCAGCGTTCTTCGTTCCTA+GGG - chr8.1:486219-486238 MS.gene012772:CDS 50.0%
ATCATGCATGTGGTACCACC+AGG - chr8.1:485220-485239 MS.gene012772:CDS 50.0%
ATGGGGGCTTAATGCTTGAC+AGG + chr8.1:485321-485340 None:intergenic 50.0%
ATTACTCGCCACTGCGAGTT+AGG + chr8.1:485786-485805 None:intergenic 50.0%
CAGTCACCTAAACAGACCTC+TGG - chr8.1:485656-485675 MS.gene012772:CDS 50.0%
CCCCATCGCTAAGGTCATAA+AGG - chr8.1:485294-485313 MS.gene012772:CDS 50.0%
CTCATGACTACACGTGCGAA+AGG - chr8.1:485728-485747 MS.gene012772:CDS 50.0%
GACCGCATAAGCTGACTGTT+GGG + chr8.1:484287-484306 None:intergenic 50.0%
GCGAGCGATGAATGTCAGTA+CGG - chr8.1:485916-485935 MS.gene012772:intron 50.0%
GCGAGTAGAAACACTCGCAA+CGG + chr8.1:485892-485911 None:intergenic 50.0%
GGCCTACTTCGGACTTTAAG+TGG - chr8.1:484018-484037 MS.gene012772:intron 50.0%
GGCGTTACATTGGAGGTCTT+AGG - chr8.1:486543-486562 MS.gene012772:CDS 50.0%
GGGTTGTCACAGTCGACATT+AGG - chr8.1:484570-484589 MS.gene012772:intron 50.0%
GGTCTTTGCTCATGGCACAT+GGG - chr8.1:483855-483874 MS.gene012772:intron 50.0%
TACACGTGTTTGCGCAGATG+CGG - chr8.1:486743-486762 MS.gene012772:CDS 50.0%
TCAACGGTGTTCTTGAGGCA+GGG - chr8.1:486784-486803 MS.gene012772:CDS 50.0%
TCATGCATGTGGTACCACCA+GGG - chr8.1:485221-485240 MS.gene012772:CDS 50.0%
TGGTCTTTGCTCATGGCACA+TGG - chr8.1:483854-483873 MS.gene012772:intron 50.0%
TGTTGCATAGTCAGCGATGG+GGG + chr8.1:485378-485397 None:intergenic 50.0%
! GGATCGCATCGGGACAATTT+TGG - chr8.1:485749-485768 MS.gene012772:intron 50.0%
! TTTGGTGCAGTCCCAACAGA+TGG + chr8.1:486906-486925 None:intergenic 50.0%
!! AAAGGAGGGCGTTACATTGG+AGG - chr8.1:486536-486555 MS.gene012772:CDS 50.0%
!! GGCGAGTAATTTGCTCGCAA+TGG - chr8.1:485796-485815 MS.gene012772:intron 50.0%
ACGTGCGAAAGGATCGCATC+GGG - chr8.1:485739-485758 MS.gene012772:intron 55.0%
CACGTGCGAAAGGATCGCAT+CGG - chr8.1:485738-485757 MS.gene012772:intron 55.0%
CTCAACGGTGTTCTTGAGGC+AGG - chr8.1:486783-486802 MS.gene012772:CDS 55.0%
GCATTAAGCCCCCATCGCTA+AGG - chr8.1:485285-485304 MS.gene012772:CDS 55.0%
GCATTAAGCCCCCTTCGCTA+AGG - chr8.1:485243-485262 MS.gene012772:CDS 55.0%
GGACCGCATAAGCTGACTGT+TGG + chr8.1:484288-484307 None:intergenic 55.0%
TGAGGCAGGGAAAAAGGCAG+AGG - chr8.1:486797-486816 MS.gene012772:CDS 55.0%
! CGTCAAAAGGAGATGGTGGC+TGG - chr8.1:482992-483011 MS.gene012772:intron 55.0%
AAGGGGGCTTAATGCCCTGG+TGG + chr8.1:485238-485257 None:intergenic 60.0%
ACGTGTTTGCGCAGATGCGG+AGG - chr8.1:486746-486765 MS.gene012772:CDS 60.0%
ATGGGGGCTTAATGCCCGAC+AGG + chr8.1:485280-485299 None:intergenic 60.0%
GAAGCGATGGGTCAAGGAGC+TGG - chr8.1:482911-482930 MS.gene012772:intron 60.0%
TGCTCGCAGTTGCGAGCGAT+GGG - chr8.1:485856-485875 MS.gene012772:intron 60.0%
TTGCTCGCAGTTGCGAGCGA+TGG - chr8.1:485855-485874 MS.gene012772:intron 60.0%
GCGAAGGGGGCTTAATGCCC+TGG + chr8.1:485241-485260 None:intergenic 65.0%
GCGATGGGTCAAGGAGCTGG+AGG - chr8.1:482914-482933 MS.gene012772:intron 65.0%
GCTCGCAATGGCGAGCTCGA+AGG - chr8.1:485808-485827 MS.gene012772:intron 65.0%
GCTCGCAGTTGCGAGCGATG+GGG - chr8.1:485857-485876 MS.gene012772:intron 65.0%
GGGTCAAGGAGCTGGAGGCA+CGG - chr8.1:482919-482938 MS.gene012772:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 482335 487069 482335 ID=MS.gene012772
chr8.1 mRNA 482335 487069 482335 ID=MS.gene012772.t1;Parent=MS.gene012772
chr8.1 exon 486187 487069 486187 ID=MS.gene012772.t1.exon1;Parent=MS.gene012772.t1
chr8.1 CDS 486187 487069 486187 ID=cds.MS.gene012772.t1;Parent=MS.gene012772.t1
chr8.1 exon 484617 485752 484617 ID=MS.gene012772.t1.exon2;Parent=MS.gene012772.t1
chr8.1 CDS 484617 485752 484617 ID=cds.MS.gene012772.t1;Parent=MS.gene012772.t1
chr8.1 exon 482452 482783 482452 ID=MS.gene012772.t1.exon3;Parent=MS.gene012772.t1
chr8.1 CDS 482452 482783 482452 ID=cds.MS.gene012772.t1;Parent=MS.gene012772.t1
chr8.1 exon 482335 482344 482335 ID=MS.gene012772.t1.exon4;Parent=MS.gene012772.t1
chr8.1 CDS 482335 482344 482335 ID=cds.MS.gene012772.t1;Parent=MS.gene012772.t1
Gene Sequence

>MS.gene012772

ATGGATTTGATATTAACTTCATCTGAGAGTGGACAATTGACGGTTGAAAATTCAGTTATTGATGCGGATAGTTCTCAATGTTACTCATTTAGTGATAAAGAATCATGGAAGTCTTTGGTCTTTAAATCTATAAAAGAGATTGAAGATTTTTATTTTAATTATGCATATAACACTGGATTCTCTGTTAGGAGTATGTTGAAGTCCAAGAACAATTCACAAAATAAGAAATCGGATAAGGTACATTATGTGCGTTATGCTTGTAACAAAGAAGGTTTCAAGAAGGGAAGTCTGCTTAATCCTAAAAACAGGCCAACATGTGACAGTCCAGTTCTTGTTGAGTATGAGAAAGCTAAAGAAAAACCAGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATTTGAAGTTGGATGAAGCGTTGAATGTCTATAAGATATATAAGTGGGAAGTTGATCACTGTCATCCATTACATAAACCAGAGCATTTGTGCTACTTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTTGCTTTAATAAATTCTAAAGCTGGAATGTCGATGAGAACATCTTATGAAGCGATGGGTCAAGGAGCTGGAGGCACGGAGAATCTTCCTTTTCCATTTTCGGACTTAAAGAACTATCTAATGACAACTCGTCAAAAGGAGATGGTGGCTGGTGAAGCAACTGTTATTCAAGAATTCTTTAGAAATGAAGCTCTCTCGAAACCAGGTTTTTACTATGATATCCAAGTTGATGCTGCAGAAGACATAGCCAGTATTTTTTGGGCAGATGGAATTATGCAACAAGATTATGCTCTATTTGGTGATGTTGTCAGTTTTGATACAACTTACCGAACAAACAATAAATATCGGCCATTAGGTTAGTATTTTGTACTTCTCACAGTTTTTAATTCTTATATTCTTGAAATTTGAATGAATGTTCTGGTTTAGAATTGAAGGTTCTGGTATATGTGTGTTAATTTGGCTCTTGTGTGTGTTTAGAATTGAATGTTTATATTGATTGAAGGTTTAGAATTTAATGTTCTGGTTTATGGGTGATCCTATCTTACCTTGGAATTTATGCTCTGTACAGCCATGGAAAGATCATATGTGTTTTTTTATCGATGATAAATAGCTCTTTCTGTGTTTGCGAGTTTAGACATCTCGCTTGAGAAGTTGTGCTATGTCCAGCTATGCAAAGATCATAGGTGTTTTTTTACAGTTGTTAAATGAATAGCTTTTTCTATTTACACAGCACAATGGTTTTATATTTTTTAAATATGTTGTATTTTGTTCTGATTTGGTTCATTTCAGCTGCCTTTCTTGGTTTTGACAATCATCGTAAGAGTGTGTTATTTGGTGCTGCGCTACTGTATGATGAGACATCAGCTACTTTTGATTGGTTGTTTACAACTTTTTTGAAGTGTATGTCCAATAAGAAACCTCAAACCATATACACAGACCAGGCTAGTGCGTTGTTGAAGTCAATTCCGAATGTTTTTCAAGGTGTTTTTCATGGTCTTTGCTCATGGCACATGGGAGAGAATGCAAAGAAAAATCTCGGCTCTCGTGCAAACAGTGCATTTTTCGATGAGTTAACTAATTTGGTTTCAAATGTCGAAGATGAATCAGATTTCGACTACAATTGGGATCAGATGATGAAAAACTGTTTTAATGGAAGGCCTACTTCGGACTTTAAGTGGCTTGTTCAAACTCATTCAAATCGTATGCATTGGTCTTCAGTTTGGGTGAGGTCACATTTTACAGCTGGTTTGAAAACGACACAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTGGACTTTAAGGCTGCAAACACTAGAACAAAAAATAATTATCCCAACAGTCAGCTTATGCGGTCCGTAGTAAACAAGTATACACCATCTTGCTTTTCATTTATTCACAGTCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGAATTGAACAAGTTCTTCAAAGTTTTCACAATTGAAAAGGTTGATTATAATTACGATGATGTTGATAATGATAATGAGAGGGTTTCGAATGTTGATGTTTTGGATGCAGAATTTGAAGAAAACCTTTCCCCAAGGTTTGAAGATCATAATCGACTTGATGAAAGGGTTGTCACAGTCGACATTAGGAGCAAAAGTTTTACTTGTTCATGTCGTATGTTTGAGAACCGGGGTTTCTTATGTCGACATGTTTTCAAGATTTTGGAGGTCTTAGGTGGTCATGTGCAATATCATTTTTTGAAGACTATACCTGCACAATATGTTTTAAAGCGGTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCCACCATGAATGTTGGCACTAAAGACACCACTCAAGCACAACGAAAACAACTTCATGATTAAGTTCATAATCAACTTCTTAAACAAACATCATCATTAAATCATAACCAAGTATCATCATATATTCAACAATTCAAGACATCATAACATCAGCATTAATATTCATTTAATATCATATTATTATTATCGTCAATCATAAACAACATCATCATCAAACATCATCATCAAAACATAATCAAACATCATCATCAAACACAAACAACCATCATCATCGAACATCACTTATCAAATCATCATTAAATATAAGTTATGACGACTCTACAATGCAACAACAACTTCAACAACAACTCAGACAACTTCAACAACAACTCAGACAACCTCAACAACAACTTAGACAACCTCATCAACAACTTAGACAACTTCATCAACAACTTAGACAACTTCATCATGCATGTGGTACCACCAGGGCATTAAGCCCCCTTCGCTAAGGTCATATTTGGACCTGTCGGGCATTAAGCCCCCATCGCTAAGGTCATAAAGGACCTGTCAAGCATTAAGCCCCCATCGCTAAGGTCATAAAGAACCTGTCGGGCATTAAGCCCCCATCGCTGACTATGCAACATCACAACTCTAAATGCAACTTGGACCACAACGTGAACATCTTATACAATTCCATTAAAATGGACAACTTCTTAAATCATGACAACTTAGACCGACTCATGAAACTTCAAGACAGTTAACAGTCAACGGCAATAAACAGCAGCAAGATACAACATATAATAGCGTCTAAATAACATATCAACATTAAAGGGAATGAATCATAACAACTTATAATCATAACGCATCTTAAATAATTCTTATACATCATCACCACTAATCTCAGTCACCTAAACAGACCTCTGGAACTTCTGAAAGTATCCTAAACAACCATTTTTCTTACTTATAAGATCAACTCATGACTACACGTGCGAAAGGATCGCATCGGGACAATTTTGGGCAACTAACAACCTAACTCGCAGTGGCGAGTAATTTGCTCGCAATGGCGAGCTCGAAGGTCTTACTCGCAGTTGCGAGTAACGTTGCTCGCAGTTGCGAGCGATGGGGTGCAGCTCGCCGTTGCGAGTGTTTCTACTCGCAGTTGCGAGCGATGAATGTCAGTACGGCCAGAAACTTAAAAATCACAACTTTTCACCTATCTTCATGATTCTTTCATCCATATGGCATCTAATTAACACCCTAGACAATATCTAAGGTCTGTAAACTAATTTTGCATCAATCTAACATTTTTTTCATGGTTTAATCATCAAATCGGTCATTTAACCCTAATCTCAATTCTCACCAAAACTCAACCTAATCATGTTAAATTCAATTCTCAGAACCATACACTTAATTATATTGAAAGCTAGTCTCACCCTTACCTTAGATAGTTTTTCTGAAATCAAAAGCAGCGTTCTTCGTTCCTAGGGTTCTCTCTCTCTCTCTGAGTTCTCCTCTTTCTCATCTTTCTCCAAAAAGCGGTTTAACGTAAAAACTCTTTCTAACCTAAGCTTCCTTATTTATAATACTACCCACTCTTCCTAAATCTATTTAGGCCCAATAACTTATTCTTCTTTCTATTCTAACCTCCAATTCTACTTACACTAATAATTCTCATATTCTAATAAATAATAGAATAATGTCACTTAATAAAATACTAGCACCTCACATATTTAAAATAAATCACATAAATAGATTCTAACTTAATAAAAATAATTAAATAAAAAGGAGGGCGTTACATTGGAGGTCTTAGGTGGTCATGTGCAATATCATTTTTTGAAGACTATACCTGCACAATATGTTTTAAAGCGGTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCCACCATGAATGTTGGCACTAAAGACACCACTCAAGCACAACGATATCAACAAATTTGTGCTGTTACAGTTCAGCTTTCTACACGTGTTTGCGCAGATGCGGAGGCATCTGAAATATTTCTCAACGGTGTTCTTGAGGCAGGGAAAAAGGCAGAGGAGTTTCTTATTTCTAAAGGTATTCATACAGATCGATCATCCGTTACGCCTTCTAAGTCTTCAAAAGCAGTTGCTGTCTATGAACCATCTGTTGGGACTGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAGGTCAAAGAAGCGACTTAAAAGTGATTATGAAAAAGCTAGAGCAAGAGAGAAATTCCTTATAGCTCGGAAGAAGCAAAAGAAAGATGACGAGGCTTTAACAATTTAAGCGGGCACTGA
Protein sequence

>MS.gene012772.t1

MDLILTSSESGQLTVENSVIDADSSQCYSFSDKESWKSLVFKSIKEIEDFYFNYAYNTGFSVRSMLKSKNNSQNKKSDKVHYVRYACNKEGFKKGSLLNPKNRPTCDSPVLVEYEKAKEKPEERVGCKAGIYLKLDEALNVYKIYKWEVDHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKAGMSMRTSYEAMGQGAGGTENLPFPFSDLKNYLMTTRQKEMVAGEATVIQEFFRNEALSKPGFYYDIQVDAAEDIASIFWADGIMQQDYALFGDVVSFDTTYRTNNKYRPLAAFLGFDNHRKSVLFGAALLYDETSATFDWLFTTFLKCMSNKKPQTIYTDQASALLKSIPNVFQGVFHGLCSWHMGENAKKNLGSRANSAFFDELTNLVSNVEDESDFDYNWDQMMKNCFNGRPTSDFKWLVQTHSNRMHWSSVWVRSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYPNSQLMRSVVNKYTPSCFSFIHSQYDLSFKYYYEEDTTKGSELNKFFKVFTIEKVDYNYDDVDNDNERVSNVDVLDAEFEENLSPRFEDHNRLDERVVTVDIRSKSFTCSCRMFENRGFLCRHVFKILEVLGGHVQYHFLKTIPAQYVLKRWTRDVRPSVDKLKSTMNRWTRDVRPSVDKLKSTMNVGTKDTTQAQRYQQICAVTVQLSTRVCADAEASEIFLNGVLEAGKKAEEFLISKGIHTDRSSVTPSKSSKAVAVYEPSVGTAPKFKERPNPISGH