AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012781

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012781.t1 MTR_4g134460 87.810 443 12 6 1 410 1 434 0.0 726
MS.gene012781.t1 MTR_5g040420 42.365 203 75 6 48 212 5 203 2.45e-42 153
MS.gene012781.t1 MTR_6g011860 44.910 167 54 3 50 178 8 174 2.53e-42 153
MS.gene012781.t1 MTR_8g467490 46.951 164 48 5 54 178 11 174 7.88e-42 152
MS.gene012781.t1 MTR_4g075980 46.711 152 49 3 56 178 14 162 1.25e-41 149
MS.gene012781.t1 MTR_5g090970 38.462 273 107 10 45 261 6 273 3.93e-41 148
MS.gene012781.t1 MTR_5g090970 38.686 274 106 11 45 261 6 274 2.74e-40 145
MS.gene012781.t1 MTR_8g059170 48.667 150 45 4 59 177 16 164 5.76e-38 140
MS.gene012781.t1 MTR_2g080010 43.713 167 53 4 59 184 17 183 1.44e-37 139
MS.gene012781.t1 MTR_3g088110 47.500 160 49 5 59 185 9 166 2.21e-37 137
MS.gene012781.t1 MTR_6g477900 47.059 153 49 4 59 180 8 159 2.60e-37 135
MS.gene012781.t1 MTR_2157s0010 45.342 161 48 4 59 179 10 170 2.67e-37 136
MS.gene012781.t1 MTR_2g079990 47.134 157 49 5 59 184 18 171 3.74e-37 138
MS.gene012781.t1 MTR_8g094580 45.455 154 49 3 59 179 9 160 9.26e-37 135
MS.gene012781.t1 MTR_5g041940 44.643 168 50 7 59 185 5 170 1.89e-36 134
MS.gene012781.t1 MTR_2g093810 42.021 188 67 7 59 205 16 202 2.07e-36 135
MS.gene012781.t1 MTR_7g085220 39.604 202 68 6 59 217 10 200 2.74e-36 135
MS.gene012781.t1 MTR_4g089135 41.304 184 55 5 54 184 12 195 2.89e-36 135
MS.gene012781.t1 MTR_3g096920 47.059 153 47 4 59 179 9 159 4.56e-36 134
MS.gene012781.t1 MTR_4g081870 45.395 152 49 5 59 177 11 161 1.05e-35 132
MS.gene012781.t1 MTR_2g064090 44.079 152 52 3 59 178 8 158 4.74e-35 132
MS.gene012781.t1 MTR_2g068880 43.820 178 51 6 44 177 14 186 6.98e-35 131
MS.gene012781.t1 MTR_3g064580 45.455 154 51 4 59 180 8 160 7.11e-35 137
MS.gene012781.t1 MTR_2g079990 53.600 125 30 3 59 156 18 141 8.38e-35 132
MS.gene012781.t1 MTR_2g068920 43.820 178 50 6 44 177 14 185 1.27e-34 130
MS.gene012781.t1 MTR_3g096920 48.252 143 45 3 59 174 9 149 1.33e-34 131
MS.gene012781.t1 MTR_6g084430 43.590 156 54 4 59 184 7 158 1.76e-34 130
MS.gene012781.t1 MTR_7g100990 43.373 166 60 4 48 179 2 167 1.87e-34 130
MS.gene012781.t1 MTR_5g076850 46.405 153 50 4 59 180 8 159 4.04e-34 134
MS.gene012781.t1 MTR_3g109340 42.581 155 61 3 53 179 18 172 4.90e-34 130
MS.gene012781.t1 MTR_4g108760 41.899 179 63 7 43 185 4 177 6.37e-34 130
MS.gene012781.t1 MTR_2g062730 42.105 152 58 2 56 177 9 160 9.26e-34 129
MS.gene012781.t1 MTR_6g012670 44.805 154 51 5 59 180 22 173 1.11e-33 128
MS.gene012781.t1 MTR_2g078700 44.737 152 52 4 59 178 25 176 1.47e-33 129
MS.gene012781.t1 MTR_3g116070 36.792 212 91 7 39 212 4 210 6.39e-33 127
MS.gene012781.t1 MTR_3g435150 42.857 154 56 4 56 178 15 167 6.56e-33 125
MS.gene012781.t1 MTR_5g069030 46.309 149 48 4 60 177 28 175 9.71e-33 130
MS.gene012781.t1 MTR_8g094580 52.778 108 43 2 78 179 1 106 1.86e-32 122
MS.gene012781.t1 MTR_3g109340 42.308 156 61 4 53 179 18 173 2.54e-32 125
MS.gene012781.t1 MTR_4g101680 41.722 151 57 3 57 177 7 156 4.64e-32 125
MS.gene012781.t1 MTR_1g097300 43.137 153 55 3 58 179 20 171 6.59e-32 127
MS.gene012781.t1 MTR_3g093050 44.295 149 51 4 60 177 25 172 1.37e-31 127
MS.gene012781.t1 MTR_3g093050 44.295 149 51 4 60 177 25 172 1.69e-31 126
MS.gene012781.t1 MTR_4g036030 41.722 151 57 3 57 177 7 156 2.66e-31 122
MS.gene012781.t1 MTR_4g035590 39.610 154 61 3 57 180 8 159 2.98e-31 122
MS.gene012781.t1 MTR_1g008740 39.053 169 72 5 48 185 4 172 3.45e-31 122
MS.gene012781.t1 MTR_5g014300 43.506 154 51 5 59 177 8 160 3.98e-31 122
MS.gene012781.t1 MTR_1g008740 40.244 164 67 5 53 185 23 186 4.93e-31 122
MS.gene012781.t1 MTR_5g012080 41.176 153 57 4 57 177 7 158 6.00e-31 121
MS.gene012781.t1 MTR_2g064470 38.974 195 74 6 59 212 13 203 1.03e-30 120
MS.gene012781.t1 MTR_4g098630 44.737 152 51 4 59 177 8 159 8.11e-30 117
MS.gene012781.t1 MTR_5g021710 40.127 157 63 3 51 177 2 157 9.00e-30 118
MS.gene012781.t1 MTR_1g069805 37.745 204 79 7 59 217 12 212 1.04e-29 116
MS.gene012781.t1 MTR_1g096430 41.026 156 53 5 56 177 6 156 1.59e-29 117
MS.gene012781.t1 MTR_3g070030 35.745 235 83 8 60 241 22 241 2.26e-29 117
MS.gene012781.t1 MTR_7g105170 37.576 165 61 3 55 178 2 165 2.38e-29 115
MS.gene012781.t1 MTR_3g093040 40.940 149 56 4 60 177 111 258 5.07e-29 115
MS.gene012781.t1 MTR_7g005280 41.667 168 69 5 59 199 17 182 7.59e-29 113
MS.gene012781.t1 MTR_6g032770 41.958 143 46 4 60 174 21 154 7.67e-29 116
MS.gene012781.t1 MTR_1g090723 39.216 153 60 4 59 179 10 161 7.92e-29 119
MS.gene012781.t1 MTR_8g024480 38.889 162 57 4 57 177 15 175 8.94e-29 117
MS.gene012781.t1 MTR_3g096140 37.975 158 66 4 53 179 3 159 8.95e-29 114
MS.gene012781.t1 MTR_4g052620 36.181 199 83 6 54 208 2 200 9.02e-29 113
MS.gene012781.t1 MTR_7g085260 40.645 155 54 4 59 177 19 171 1.02e-28 116
MS.gene012781.t1 MTR_1g090720 42.857 161 54 4 57 180 42 201 1.32e-28 117
MS.gene012781.t1 MTR_2g086690 40.252 159 57 3 59 179 6 164 1.37e-28 112
MS.gene012781.t1 MTR_8g063550 36.538 156 63 5 57 179 6 158 1.48e-28 115
MS.gene012781.t1 MTR_8g063550 36.538 156 63 5 57 179 6 158 1.75e-28 116
MS.gene012781.t1 MTR_8g076110 41.060 151 58 3 57 177 6 155 1.81e-28 114
MS.gene012781.t1 MTR_8g063550 36.538 156 63 5 57 179 6 158 2.05e-28 116
MS.gene012781.t1 MTR_8g099750 43.671 158 54 6 59 181 16 173 2.54e-28 111
MS.gene012781.t1 MTR_3g096140 37.975 158 66 4 53 179 3 159 2.82e-28 114
MS.gene012781.t1 MTR_7g097090 43.151 146 51 4 59 175 12 154 4.44e-28 112
MS.gene012781.t1 MTR_8g093580 35.256 156 65 5 57 179 6 158 1.87e-27 114
MS.gene012781.t1 MTR_1g090723 38.158 152 62 4 59 179 10 160 2.29e-27 114
MS.gene012781.t1 MTR_1g090723 38.158 152 62 4 59 179 10 160 2.54e-27 114
MS.gene012781.t1 MTR_0036s0150 38.816 152 61 4 59 179 7 157 2.61e-27 114
MS.gene012781.t1 MTR_7g011130 37.037 162 57 3 60 177 22 182 4.60e-27 110
MS.gene012781.t1 MTR_7g011120 37.821 156 58 3 60 177 11 165 1.51e-26 108
MS.gene012781.t1 MTR_2g086880 42.857 126 43 3 57 154 18 142 8.40e-25 107
MS.gene012781.t1 MTR_2g086880 42.857 126 43 3 57 154 18 142 1.02e-24 106
MS.gene012781.t1 MTR_3g098810 38.889 162 61 5 59 182 16 177 2.31e-23 98.2
MS.gene012781.t1 MTR_8g023840 38.854 157 54 7 52 174 7 155 5.63e-23 100
MS.gene012781.t1 MTR_3g096140 43.396 106 57 2 76 179 34 138 1.30e-22 98.2
MS.gene012781.t1 MTR_7g070140 51.136 88 42 1 83 169 17 104 3.59e-22 92.0
MS.gene012781.t1 MTR_3g098810 43.651 126 43 3 59 156 16 141 8.45e-22 92.0
MS.gene012781.t1 MTR_3g070040 33.621 232 88 9 61 241 12 228 2.08e-20 92.0
MS.gene012781.t1 MTR_8g023860 35.099 151 63 4 55 174 10 156 3.92e-20 92.0
MS.gene012781.t1 MTR_8g023900 32.704 159 74 5 54 181 9 165 3.97e-18 86.7
MS.gene012781.t1 MTR_8g023900 34.667 150 61 6 60 177 196 340 2.54e-16 80.9
MS.gene012781.t1 MTR_8g023930 33.758 157 65 6 55 178 22 172 3.05e-16 80.9
MS.gene012781.t1 MTR_4g094302 30.968 155 63 4 59 177 13 159 1.19e-14 72.4
MS.gene012781.t1 MTR_4g094302 33.333 126 48 3 59 156 13 130 1.56e-13 68.6
MS.gene012781.t1 MTR_8g093790 31.724 145 55 5 59 177 12 138 5.91e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012781.t1 AT2G02450 74.074 162 15 1 56 190 50 211 5.02e-81 254
MS.gene012781.t1 AT2G02450 74.074 162 15 1 56 190 50 211 6.05e-81 255
MS.gene012781.t1 AT5G39820 42.079 202 62 6 42 188 2 203 2.96e-44 157
MS.gene012781.t1 AT1G26870 40.686 204 82 5 46 210 5 208 3.07e-41 151
MS.gene012781.t1 AT2G17040 47.059 153 49 3 55 178 4 153 3.38e-41 147
MS.gene012781.t1 AT3G04070 37.548 261 104 11 59 278 12 254 5.94e-39 143
MS.gene012781.t1 AT3G15500 50.000 148 44 4 59 177 16 162 1.10e-38 142
MS.gene012781.t1 AT1G61110 45.506 178 55 5 54 190 13 189 1.61e-38 141
MS.gene012781.t1 AT4G27410 48.649 148 46 4 59 177 16 162 2.06e-38 140
MS.gene012781.t1 AT2G43000 38.542 192 85 4 49 208 10 200 2.44e-38 139
MS.gene012781.t1 AT1G52890 50.000 148 44 4 59 177 16 162 3.18e-38 140
MS.gene012781.t1 AT5G08790 46.452 155 47 4 60 180 10 162 1.49e-37 137
MS.gene012781.t1 AT3G03200 46.203 158 52 4 59 184 8 164 4.99e-37 140
MS.gene012781.t1 AT1G69490 45.513 156 47 5 59 179 11 163 5.78e-37 135
MS.gene012781.t1 AT3G04070 35.379 277 104 11 59 278 12 270 7.87e-37 137
MS.gene012781.t1 AT1G01720 46.835 158 49 4 59 183 9 164 3.66e-36 134
MS.gene012781.t1 AT1G77450 46.753 154 48 4 59 180 12 163 5.11e-36 133
MS.gene012781.t1 AT5G17260 45.570 158 53 4 59 184 8 164 5.22e-36 138
MS.gene012781.t1 AT1G76420 44.667 150 54 3 59 179 24 173 5.31e-36 135
MS.gene012781.t1 AT3G17730 45.098 153 52 4 59 180 8 159 5.49e-36 132
MS.gene012781.t1 AT5G63790 46.104 154 47 4 60 179 53 204 6.25e-36 134
MS.gene012781.t1 AT5G63790 46.104 154 47 4 60 179 63 214 6.26e-36 134
MS.gene012781.t1 AT4G27410 43.636 165 46 4 59 177 16 179 8.89e-36 134
MS.gene012781.t1 AT3G29035 40.306 196 74 7 44 201 11 201 1.50e-35 133
MS.gene012781.t1 AT3G10490 45.752 153 50 4 57 177 27 178 1.80e-35 131
MS.gene012781.t1 AT5G39610 44.025 159 57 4 50 177 13 170 1.83e-35 132
MS.gene012781.t1 AT3G15510 42.683 164 53 4 61 183 21 184 2.96e-35 134
MS.gene012781.t1 AT3G15170 45.455 154 52 4 59 180 22 175 4.83e-35 132
MS.gene012781.t1 AT5G07680 43.820 178 60 6 42 184 3 175 9.38e-35 131
MS.gene012781.t1 AT3G10490 44.872 156 53 4 57 180 27 181 1.28e-34 134
MS.gene012781.t1 AT3G10480 44.231 156 54 4 57 180 27 181 1.54e-34 133
MS.gene012781.t1 AT3G10480 44.586 157 51 5 57 180 27 180 2.88e-34 132
MS.gene012781.t1 AT5G61430 43.791 153 52 4 59 179 18 168 5.79e-34 129
MS.gene012781.t1 AT5G07680 45.342 161 49 5 59 184 5 161 1.04e-33 128
MS.gene012781.t1 AT3G04060 41.212 165 66 2 44 177 7 171 1.17e-33 129
MS.gene012781.t1 AT1G65910 44.444 153 53 4 59 180 8 159 4.94e-33 131
MS.gene012781.t1 AT1G34180 42.484 153 56 3 59 180 18 169 5.41e-33 129
MS.gene012781.t1 AT2G24430 41.615 161 65 4 46 177 5 165 6.13e-33 126
MS.gene012781.t1 AT2G24430 41.615 161 65 4 46 177 5 165 6.13e-33 126
MS.gene012781.t1 AT1G79580 43.046 151 55 3 57 177 17 166 9.76e-33 127
MS.gene012781.t1 AT1G79580 43.046 151 55 3 57 177 17 166 9.76e-33 127
MS.gene012781.t1 AT1G79580 43.046 151 55 3 57 177 17 166 9.76e-33 127
MS.gene012781.t1 AT1G79580 43.046 151 55 3 57 177 17 166 9.76e-33 127
MS.gene012781.t1 AT1G79580 43.046 151 55 3 57 177 17 166 9.76e-33 127
MS.gene012781.t1 AT1G34180 42.763 152 55 3 59 179 18 168 1.87e-32 129
MS.gene012781.t1 AT1G33280 40.260 154 60 3 57 180 8 159 2.91e-32 124
MS.gene012781.t1 AT5G46590 44.595 148 50 3 59 174 8 155 3.05e-32 124
MS.gene012781.t1 AT3G18400 43.709 151 50 5 59 178 7 153 4.13e-32 124
MS.gene012781.t1 AT5G24590 38.365 159 67 2 60 187 16 174 7.87e-32 125
MS.gene012781.t1 AT5G53950 43.478 161 57 5 51 177 9 169 1.72e-31 124
MS.gene012781.t1 AT1G34190 41.447 152 57 3 59 179 18 168 1.83e-31 126
MS.gene012781.t1 AT1G34180 39.394 165 56 3 59 180 18 181 2.43e-31 124
MS.gene012781.t1 AT4G17980 43.137 153 53 4 59 177 8 160 2.66e-31 121
MS.gene012781.t1 AT1G62700 42.384 151 56 3 57 177 7 156 2.72e-31 123
MS.gene012781.t1 AT1G62700 42.384 151 56 3 57 177 7 156 2.72e-31 123
MS.gene012781.t1 AT4G17980 43.137 153 53 4 59 177 8 160 2.82e-31 120
MS.gene012781.t1 AT1G12260 42.384 151 56 3 57 177 7 156 3.02e-31 123
MS.gene012781.t1 AT1G12260 42.384 151 56 3 57 177 7 156 3.51e-31 122
MS.gene012781.t1 AT5G18270 42.000 150 56 2 59 177 23 172 3.51e-31 122
MS.gene012781.t1 AT5G18270 42.000 150 56 2 59 177 23 172 3.51e-31 122
MS.gene012781.t1 AT1G56010 42.105 152 54 4 59 177 21 171 4.63e-31 121
MS.gene012781.t1 AT1G34180 39.634 164 55 3 59 179 18 180 6.78e-31 124
MS.gene012781.t1 AT1G32510 41.618 173 59 5 59 193 8 176 1.16e-30 119
MS.gene012781.t1 AT3G12977 43.624 149 53 4 59 177 20 167 1.56e-30 119
MS.gene012781.t1 AT4G36160 29.329 283 153 6 57 305 10 279 1.74e-30 120
MS.gene012781.t1 AT4G36160 29.329 283 153 6 57 305 10 279 1.74e-30 120
MS.gene012781.t1 AT1G52880 45.223 157 46 5 61 177 21 177 2.14e-30 119
MS.gene012781.t1 AT4G36160 29.329 283 153 6 57 305 14 283 2.15e-30 120
MS.gene012781.t1 AT3G10500 38.961 154 62 4 57 179 9 161 3.78e-30 122
MS.gene012781.t1 AT5G46590 45.455 132 43 2 59 161 8 139 4.25e-30 117
MS.gene012781.t1 AT4G35580 44.966 149 50 4 60 177 12 159 4.36e-30 122
MS.gene012781.t1 AT4G35580 44.966 149 50 4 60 177 12 159 4.51e-30 122
MS.gene012781.t1 AT4G35580 44.966 149 50 4 60 177 12 159 4.76e-30 122
MS.gene012781.t1 AT4G10350 38.462 156 63 3 57 180 9 163 5.10e-30 119
MS.gene012781.t1 AT2G46770 39.053 169 57 6 57 180 16 183 5.87e-30 119
MS.gene012781.t1 AT5G04410 40.000 155 59 5 57 179 9 161 7.84e-30 121
MS.gene012781.t1 AT1G71930 40.940 149 57 3 59 177 11 158 1.03e-29 117
MS.gene012781.t1 AT1G71930 40.940 149 57 3 59 177 11 158 1.03e-29 117
MS.gene012781.t1 AT1G33060 41.611 149 55 3 60 177 27 174 1.12e-29 121
MS.gene012781.t1 AT1G33060 41.611 149 55 3 60 177 27 174 1.26e-29 121
MS.gene012781.t1 AT5G62380 37.037 162 71 2 59 190 9 169 1.58e-29 117
MS.gene012781.t1 AT5G62380 37.037 162 71 2 59 190 9 169 1.58e-29 117
MS.gene012781.t1 AT1G54330 45.270 148 50 4 59 177 8 153 1.99e-29 116
MS.gene012781.t1 AT3G61910 45.455 132 41 3 57 158 11 141 2.32e-29 117
MS.gene012781.t1 AT2G18060 41.060 151 58 3 57 177 9 158 2.94e-29 117
MS.gene012781.t1 AT2G18060 41.060 151 58 3 57 177 9 158 2.94e-29 117
MS.gene012781.t1 AT2G33480 44.681 141 53 3 59 175 17 156 3.63e-29 115
MS.gene012781.t1 AT5G61430 50.467 107 46 3 78 179 1 105 5.23e-29 114
MS.gene012781.t1 AT5G13180 46.980 149 51 5 59 179 16 164 9.65e-29 113
MS.gene012781.t1 AT3G12910 39.080 174 62 3 49 178 13 186 9.80e-29 114
MS.gene012781.t1 AT2G33480 46.154 143 50 4 59 175 17 158 1.04e-28 113
MS.gene012781.t1 AT1G32770 35.429 175 67 4 57 186 16 189 1.77e-28 115
MS.gene012781.t1 AT3G49530 38.255 149 61 3 60 177 16 164 4.16e-28 115
MS.gene012781.t1 AT5G22380 40.741 162 59 3 55 179 3 164 4.60e-28 111
MS.gene012781.t1 AT3G49530 37.888 161 65 4 60 185 16 176 5.07e-28 115
MS.gene012781.t1 AT1G56010 47.619 105 49 2 78 177 1 104 2.41e-27 109
MS.gene012781.t1 AT3G12977 50.000 102 47 2 79 177 14 114 2.44e-27 108
MS.gene012781.t1 AT4G28530 39.024 164 54 4 59 178 12 173 2.46e-27 111
MS.gene012781.t1 AT3G44350 36.000 200 80 7 60 211 8 207 2.74e-27 108
MS.gene012781.t1 AT3G10480 47.788 113 55 2 71 180 103 214 5.02e-27 113
MS.gene012781.t1 AT5G66300 39.474 152 60 4 57 177 12 162 6.90e-27 109
MS.gene012781.t1 AT1G32870 40.000 160 60 5 53 179 6 162 7.95e-27 112
MS.gene012781.t1 AT1G32870 40.000 160 60 5 53 179 6 162 8.76e-27 112
MS.gene012781.t1 AT1G32870 40.000 160 60 5 53 179 42 198 1.45e-26 112
MS.gene012781.t1 AT4G10350 43.103 116 60 3 70 180 2 116 4.96e-25 104
MS.gene012781.t1 AT3G44350 41.406 128 43 3 60 155 8 135 7.17e-24 97.4
MS.gene012781.t1 AT5G09330 35.065 154 68 4 57 179 6 158 8.40e-24 103
MS.gene012781.t1 AT5G09330 35.065 154 68 4 57 179 6 158 8.40e-24 103
MS.gene012781.t1 AT5G09330 35.065 154 68 4 57 179 6 158 8.40e-24 103
MS.gene012781.t1 AT5G09330 35.065 154 68 4 57 179 6 158 8.40e-24 103
MS.gene012781.t1 AT5G09330 35.065 154 68 4 57 179 6 158 8.40e-24 103
MS.gene012781.t1 AT2G43000 41.803 122 65 3 92 208 2 122 1.80e-23 97.4
MS.gene012781.t1 AT5G64060 29.876 241 120 7 57 266 6 228 2.73e-23 100
MS.gene012781.t1 AT2G27300 36.601 153 57 5 57 178 14 157 5.49e-23 99.4
MS.gene012781.t1 AT2G33480 50.526 95 44 2 83 175 8 101 9.55e-23 95.9
MS.gene012781.t1 AT5G22290 38.462 130 51 3 53 154 17 145 1.46e-21 95.5
MS.gene012781.t1 AT5G04395 35.417 144 51 3 59 160 30 173 5.00e-21 90.5
MS.gene012781.t1 AT3G44290 38.400 125 48 3 58 154 15 138 2.38e-20 89.7
MS.gene012781.t1 AT3G44290 38.400 125 48 3 58 154 15 138 8.33e-20 90.1
MS.gene012781.t1 AT3G10490 50.617 81 36 2 103 180 2 81 1.22e-19 90.1
MS.gene012781.t1 AT3G10490 50.617 81 36 2 103 180 2 81 1.22e-19 90.1
MS.gene012781.t1 AT4G01550 34.356 163 66 6 58 185 5 161 1.75e-19 90.5
MS.gene012781.t1 AT4G01540 35.404 161 61 6 58 181 5 159 5.83e-18 85.9
MS.gene012781.t1 AT4G01520 35.220 159 60 6 60 181 7 159 7.14e-18 84.0
MS.gene012781.t1 AT4G01540 35.849 159 59 6 60 181 7 159 8.63e-18 85.1
MS.gene012781.t1 AT4G01540 35.849 159 59 6 60 181 7 159 9.77e-18 85.5
MS.gene012781.t1 AT4G01540 35.849 159 59 6 60 181 7 159 1.18e-17 84.7
MS.gene012781.t1 AT3G04420 33.333 126 52 2 60 154 6 130 2.32e-14 73.6
MS.gene012781.t1 AT3G04420 33.333 126 52 2 60 154 6 130 2.34e-14 74.3
MS.gene012781.t1 AT2G18060 44.286 70 38 1 108 177 2 70 1.40e-13 71.2
MS.gene012781.t1 AT5G64530 35.433 127 42 5 59 157 5 119 2.25e-13 68.2
MS.gene012781.t1 AT4G28530 35.156 128 35 3 59 140 12 137 3.12e-13 70.5
MS.gene012781.t1 AT1G02230 32.000 150 60 6 60 174 6 148 4.73e-13 70.5
MS.gene012781.t1 AT3G56530 25.850 147 78 2 59 175 54 199 1.47e-11 65.5
MS.gene012781.t1 AT1G02220 29.221 154 71 4 60 182 6 152 4.09e-11 64.7

Find 107 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTAACAACTTCTGGTTAT+TGG 0.211019 8.1:-350044 MS.gene012781:CDS
GATGATGATGGTCGTGTAAT+TGG 0.239615 8.1:+349015 None:intergenic
TAAGCAGCAAAATGAAATAT+TGG 0.264868 8.1:-348956 MS.gene012781:CDS
ACTGAAAACTTTCGTTCAAT+TGG 0.296485 8.1:-349991 MS.gene012781:CDS
CCTAATCGTGTAACAACTTC+TGG 0.308486 8.1:-350051 MS.gene012781:CDS
CCAGAAGTTGTTACACGATT+AGG 0.317297 8.1:+350051 None:intergenic
ATATCGTTCGGTTTCATGTT+GGG 0.335622 8.1:+349885 None:intergenic
AAGGAGGTTGGAAATTGATT+TGG 0.344511 8.1:+348457 None:intergenic
TGAAGCTGAGACTGGGAAAA+TGG 0.347823 8.1:+348654 None:intergenic
GCTGCCGCTGAAGCTGAGAC+TGG 0.355613 8.1:+348646 None:intergenic
GTAGACAAATGATTGGGATT+TGG 0.373594 8.1:+348502 None:intergenic
CAACTGGTTCGGATGCCTTT+GGG 0.374805 8.1:+349931 None:intergenic
CCAACTGGTTCGGATGCCTT+TGG 0.377419 8.1:+349930 None:intergenic
AAGCAGCAAAATGAAATATT+GGG 0.379687 8.1:-348955 MS.gene012781:CDS
TGATCACATAGTTAACAAAA+TGG 0.392091 8.1:-348893 MS.gene012781:CDS
AAGCTCATGCTGCTCATGTT+AGG 0.402422 8.1:+350734 None:intergenic
TCTTCTGAACGGTAATTAGT+AGG 0.410368 8.1:+348793 None:intergenic
GATCATGTCACAACCACTCT+TGG 0.411521 8.1:-348844 MS.gene012781:CDS
ATGTGATCATCAATTGTCTT+TGG 0.414276 8.1:+348907 None:intergenic
ATGATGATGGTCGTGTAATT+GGG 0.415001 8.1:+349016 None:intergenic
GAGGTGTTGTTACTACTGTT+GGG 0.428986 8.1:+348385 None:intergenic
TGCAGCACTGGTAGCAGTAT+TGG 0.434071 8.1:+348609 None:intergenic
TTGGGGTGATTATGATCCTC+AGG 0.436862 8.1:+348403 None:intergenic
CAGCAATGTAGACAAATGAT+TGG 0.439526 8.1:+348495 None:intergenic
TCTGGTTATTGGAAAGCAAC+AGG 0.440994 8.1:-350033 MS.gene012781:CDS
GATATCGTTCGGTTTCATGT+TGG 0.441960 8.1:+349884 None:intergenic
TTGGGAATGGGATTTGTTGT+TGG 0.446359 8.1:-348937 MS.gene012781:CDS
TGATGATGGATGATCTCAAT+AGG 0.454191 8.1:-348585 MS.gene012781:CDS
GCAAAATGAAATATTGGGAA+TGG 0.458597 8.1:-348950 MS.gene012781:CDS
GGAGGTGTTGTTACTACTGT+TGG 0.465590 8.1:+348384 None:intergenic
CAAAATGAAATATTGGGAAT+GGG 0.469377 8.1:-348949 MS.gene012781:CDS
GAGCATGACGTGGTTATGCC+AGG 0.470442 8.1:-350617 MS.gene012781:CDS
TCTCTGACCGACTGTGGGAC+TGG 0.472209 8.1:-348435 MS.gene012781:CDS
TGATTATGATCCTCAGGGAT+TGG 0.472665 8.1:+348409 None:intergenic
ATACTCATTCATAATCCAAC+TGG 0.474720 8.1:+349915 None:intergenic
CATTCATAATCCAACTGGTT+CGG 0.480582 8.1:+349920 None:intergenic
AGGAGGAGTATTGCTGTACT+TGG 0.484755 8.1:+348816 None:intergenic
CAAGCTCTTCTTCAGTTGGA+TGG 0.486659 8.1:+350585 None:intergenic
AGTAATTAGTGATTACTTGA+AGG 0.490931 8.1:+348363 None:intergenic
ATCATGTCACAACCACTCTT+GGG 0.491534 8.1:-348843 MS.gene012781:CDS
GGCGCTGCCGCCACCACAAG+CGG 0.493139 8.1:+348675 None:intergenic
GATTTGGATGATTGAGATGT+GGG 0.497103 8.1:+348518 None:intergenic
TTCCCTCGACCTTACGGCGA+AGG 0.497938 8.1:+350552 None:intergenic
CTGCCGCTGAAGCTGAGACT+GGG 0.499254 8.1:+348647 None:intergenic
GGAAATTGATTTGGTAACAT+TGG 0.503521 8.1:+348466 None:intergenic
TATCGTTCGGTTTCATGTTG+GGG 0.505358 8.1:+349886 None:intergenic
TTAGTCTCCGCTTGTGGTGG+CGG 0.506486 8.1:-348682 MS.gene012781:CDS
TCTACAAGCTCTTCTTCAGT+TGG 0.506937 8.1:+350581 None:intergenic
TGAAACCGAACGATATCAAA+AGG 0.509230 8.1:-349878 MS.gene012781:intron
ATCCATCATCATTGCAGCAC+TGG 0.512112 8.1:+348597 None:intergenic
TTTGGCAGCAATCGGAGAGA+AGG 0.516877 8.1:-350124 MS.gene012781:CDS
GGAAAGCAACAGGAGCAGAT+AGG 0.517048 8.1:-350023 MS.gene012781:CDS
AGCAATGTAGACAAATGATT+GGG 0.519527 8.1:+348496 None:intergenic
TGAGCAGCTTTGGCAGCAAT+CGG 0.520334 8.1:-350132 MS.gene012781:intron
GGGTGAGATATCCCTATGTC+GGG 0.523444 8.1:-349088 MS.gene012781:CDS
TACCGTTCAGAAGATGAAGA+AGG 0.528026 8.1:-348784 MS.gene012781:CDS
CCTCCTTCTCTGACCGACTG+TGG 0.530397 8.1:-348441 MS.gene012781:CDS
AGCTACAGCTACAGTAGTAG+TGG 0.543646 8.1:-350660 MS.gene012781:CDS
CCACAGTCGGTCAGAGAAGG+AGG 0.546229 8.1:+348441 None:intergenic
TGGGAGACAACGAGGGAGGG+AGG 0.546963 8.1:+349035 None:intergenic
GCATATTGTACTAGTTGCCT+AGG 0.547334 8.1:+348724 None:intergenic
TGGATGGCAATAGCAGCAGC+AGG 0.551609 8.1:-350776 MS.gene012781:CDS
GTCCCACAGTCGGTCAGAGA+AGG 0.552251 8.1:+348438 None:intergenic
GGGAGACAACGAGGGAGGGA+GGG 0.560158 8.1:+349036 None:intergenic
AGTCGGTCAGAGAAGGAGGT+TGG 0.561135 8.1:+348445 None:intergenic
TACCAGTGCTGCAATGATGA+TGG 0.562350 8.1:-348599 MS.gene012781:CDS
CTCCTTCTCTGACCGACTGT+GGG 0.564074 8.1:-348440 MS.gene012781:CDS
CTAGTACAATATGCAGCTGC+GGG 0.565924 8.1:-348715 MS.gene012781:CDS
ATCCTTCTTCATCTTCTGAA+CGG 0.566170 8.1:+348782 None:intergenic
TGGGGTGATTATGATCCTCA+GGG 0.566445 8.1:+348404 None:intergenic
CACATAGTTAACAAAATGGA+AGG 0.567229 8.1:-348889 MS.gene012781:CDS
GAACGGTAATTAGTAGGAGG+AGG 0.572179 8.1:+348799 None:intergenic
AGGGTGAGATATCCCTATGT+CGG 0.573960 8.1:-349089 MS.gene012781:CDS
GGATTTGGATGATTGAGATG+TGG 0.580035 8.1:+348517 None:intergenic
AATTAGTGATTACTTGAAGG+AGG 0.582479 8.1:+348366 None:intergenic
ATGAGCTTGAGTCACGAAGA+TGG 0.587554 8.1:-350719 MS.gene012781:CDS
CTGTTAGTCTCCGCTTGTGG+TGG 0.588546 8.1:-348685 MS.gene012781:CDS
TCTCTTGTATACCCGACATA+GGG 0.588580 8.1:+349077 None:intergenic
CTCTCTTGTATACCCGACAT+AGG 0.590093 8.1:+349076 None:intergenic
CCAAAGGCATCCGAACCAGT+TGG 0.592737 8.1:-349930 MS.gene012781:CDS
CGAGATAGAAAGTATCGAAA+CGG 0.593685 8.1:-350081 MS.gene012781:CDS
AGCATGACGTGGTTATGCCA+GGG 0.596795 8.1:-350616 MS.gene012781:CDS
TGTCGGGTATACAAGAGAGC+AGG 0.602519 8.1:-349072 MS.gene012781:CDS
AATTGGGAGACAACGAGGGA+GGG 0.605068 8.1:+349032 None:intergenic
TTTCGATACTTTCTATCTCG+AGG 0.612931 8.1:+350084 None:intergenic
CGACCATCATCATCATCAAG+AGG 0.614625 8.1:-349006 MS.gene012781:CDS
TCTAACGATAATAGTAACAA+AGG 0.615780 8.1:-350683 MS.gene012781:CDS
TCTCTGTTAGTCTCCGCTTG+TGG 0.618457 8.1:-348688 MS.gene012781:CDS
TTTCCCAGTCTCAGCTTCAG+CGG 0.622682 8.1:-348650 MS.gene012781:CDS
TCTGAACGGTAATTAGTAGG+AGG 0.623921 8.1:+348796 None:intergenic
ACTAGTACAATATGCAGCTG+CGG 0.627166 8.1:-348716 MS.gene012781:CDS
GTACCTCTTGATGATGATGA+TGG 0.633918 8.1:+349003 None:intergenic
AGGTGTTGTTACTACTGTTG+GGG 0.635388 8.1:+348386 None:intergenic
CAGCAATCGGAGAGAAGGAG+TGG 0.646393 8.1:-350119 MS.gene012781:CDS
AGCAGCAGCAACATCAACCT+AGG 0.647554 8.1:-348741 MS.gene012781:CDS
TATTCTGGAAAAGCTCCCAA+AGG 0.650827 8.1:-349946 MS.gene012781:CDS
AAAATGGAAGGAAGCAGTAG+CGG 0.650928 8.1:-348877 MS.gene012781:CDS
ATGGCAATAGCAGCAGCAGG+AGG 0.651608 8.1:-350773 MS.gene012781:CDS
GTTGGATGGAAACGAAACCC+TGG 0.652572 8.1:+350599 None:intergenic
TAATTGGGAGACAACGAGGG+AGG 0.654012 8.1:+349031 None:intergenic
CGTGTAATTGGGAGACAACG+AGG 0.654137 8.1:+349027 None:intergenic
TTGGATTCCAGTCCCACAGT+CGG 0.664258 8.1:+348428 None:intergenic
ATGGAAGGAAGCAGTAGCGG+CGG 0.686399 8.1:-348874 MS.gene012781:CDS
GTACTTGGAAAGCCCAAGAG+TGG 0.699274 8.1:+348831 None:intergenic
GTGTAATTGGGAGACAACGA+GGG 0.701719 8.1:+349028 None:intergenic
TGATGATCACGAGCATGACG+TGG 0.732266 8.1:-350627 MS.gene012781:CDS
GGACTGGAATCCAATCCCTG+AGG 0.753349 8.1:-348419 MS.gene012781:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAATAAATATATACC+AGG + chr8.1:348684-348703 None:intergenic 10.0%
!! ATATATATATATATGCTATA+TGG + chr8.1:349640-349659 None:intergenic 10.0%
!! ATTATATTATTAAATCAAAG+AGG + chr8.1:348816-348835 None:intergenic 10.0%
!! TTATATTATTAAATCAAAGA+GGG + chr8.1:348815-348834 None:intergenic 10.0%
!!! TTTTTGATAAATAAATATCT+TGG - chr8.1:348845-348864 MS.gene012781:CDS 10.0%
!! TCAAATTCAAAATTATTGTA+AGG + chr8.1:350030-350049 None:intergenic 15.0%
!! TTGAATTTGAATTTGAATTA+GGG - chr8.1:350040-350059 MS.gene012781:CDS 15.0%
!! TTTGAATTTGAATTTGAATT+AGG - chr8.1:350039-350058 MS.gene012781:CDS 15.0%
!!! GTTGTATATGAATATATTTT+AGG + chr8.1:349761-349780 None:intergenic 15.0%
!! AAATATGAAGCAAATAAGTA+AGG + chr8.1:348874-348893 None:intergenic 20.0%
!! AATATGAAGCAAATAAGTAA+GGG + chr8.1:348873-348892 None:intergenic 20.0%
!! GTGTGTATACTATATATTTA+TGG + chr8.1:349529-349548 None:intergenic 20.0%
!!! AATATAGCTCTTTAAAACTA+GGG + chr8.1:349465-349484 None:intergenic 20.0%
!!! AATTATGTGATTGAATTTTG+AGG - chr8.1:348962-348981 MS.gene012781:CDS 20.0%
!!! ATATTATGCATCTTGATTTT+GGG - chr8.1:349487-349506 MS.gene012781:intron 20.0%
!!! GAAAGGAATTAATTAATTTG+TGG + chr8.1:349880-349899 None:intergenic 20.0%
!!! TAATATAGCTCTTTAAAACT+AGG + chr8.1:349466-349485 None:intergenic 20.0%
!!! TATATTATGCATCTTGATTT+TGG - chr8.1:349486-349505 MS.gene012781:intron 20.0%
! AAGCAGCAAAATGAAATATT+GGG - chr8.1:350193-350212 MS.gene012781:intron 25.0%
! ATATATATATGCTATATGGC+TGG + chr8.1:349636-349655 None:intergenic 25.0%
! ATTATTAAATCAAAGAGGGA+TGG + chr8.1:348811-348830 None:intergenic 25.0%
! CAAAATGAAATATTGGGAAT+GGG - chr8.1:350199-350218 MS.gene012781:intron 25.0%
! TAAGCAGCAAAATGAAATAT+TGG - chr8.1:350192-350211 MS.gene012781:intron 25.0%
! TATTGTAAGGATCCAAAATT+TGG + chr8.1:350017-350036 None:intergenic 25.0%
! TCTAACGATAATAGTAACAA+AGG - chr8.1:348465-348484 MS.gene012781:CDS 25.0%
! TGATCACATAGTTAACAAAA+TGG - chr8.1:350255-350274 MS.gene012781:intron 25.0%
! TTATTAAATCAAAGAGGGAT+GGG + chr8.1:348810-348829 None:intergenic 25.0%
!! ATATACCTTTTGATATCGTT+CGG + chr8.1:349278-349297 None:intergenic 25.0%
!! ATGAAATGTATGCCAAATTT+TGG - chr8.1:350002-350021 MS.gene012781:CDS 25.0%
!! TTTTCCAGAATAGAAAACTA+GGG + chr8.1:349194-349213 None:intergenic 25.0%
!!! CATTACTGATTTTTCTTTCA+TGG - chr8.1:349385-349404 MS.gene012781:intron 25.0%
!!! TTTTAAAACCAACAAAGACA+CGG + chr8.1:349435-349454 None:intergenic 25.0%
ACTGAAAACTTTCGTTCAAT+TGG - chr8.1:349157-349176 MS.gene012781:intron 30.0%
AGCAATGTAGACAAATGATT+GGG + chr8.1:350655-350674 None:intergenic 30.0%
ATACTCATTCATAATCCAAC+TGG + chr8.1:349236-349255 None:intergenic 30.0%
ATGTGATCATCAATTGTCTT+TGG + chr8.1:350244-350263 None:intergenic 30.0%
CACATAGTTAACAAAATGGA+AGG - chr8.1:350259-350278 MS.gene012781:intron 30.0%
GAGAGGTAATTAATCACAAA+CGG + chr8.1:349792-349811 None:intergenic 30.0%
GCAAAATGAAATATTGGGAA+TGG - chr8.1:350198-350217 MS.gene012781:intron 30.0%
! CTTTTCCAGAATAGAAAACT+AGG + chr8.1:349195-349214 None:intergenic 30.0%
! GCAGTTCTATTTGGTAATTA+AGG + chr8.1:349348-349367 None:intergenic 30.0%
!! AAAACCCTAGTTTTCTATTC+TGG - chr8.1:349187-349206 MS.gene012781:intron 30.0%
!! GGAAATTGATTTGGTAACAT+TGG + chr8.1:350685-350704 None:intergenic 30.0%
!! TATGTGATTGAATTTTGAGG+TGG - chr8.1:348965-348984 MS.gene012781:CDS 30.0%
AAATGATCACGAGAGATGAA+AGG + chr8.1:349897-349916 None:intergenic 35.0%
AAGGAGGTTGGAAATTGATT+TGG + chr8.1:350694-350713 None:intergenic 35.0%
AGGGATGGGAACAAAAAAAA+GGG + chr8.1:348796-348815 None:intergenic 35.0%
ATATCGTTCGGTTTCATGTT+GGG + chr8.1:349266-349285 None:intergenic 35.0%
ATCCTTCTTCATCTTCTGAA+CGG + chr8.1:350369-350388 None:intergenic 35.0%
CAGCAATGTAGACAAATGAT+TGG + chr8.1:350656-350675 None:intergenic 35.0%
CATTCATAATCCAACTGGTT+CGG + chr8.1:349231-349250 None:intergenic 35.0%
GATTTGGATGATTGAGATGT+GGG + chr8.1:350633-350652 None:intergenic 35.0%
GTAGACAAATGATTGGGATT+TGG + chr8.1:350649-350668 None:intergenic 35.0%
TATATATGCTATATGGCTGG+TGG + chr8.1:349633-349652 None:intergenic 35.0%
TATTGAAACCGTGTCTTTGT+TGG - chr8.1:349424-349443 MS.gene012781:intron 35.0%
TCTTCTGAACGGTAATTAGT+AGG + chr8.1:350358-350377 None:intergenic 35.0%
TGAAACCGAACGATATCAAA+AGG - chr8.1:349270-349289 MS.gene012781:intron 35.0%
TTTCGATACTTTCTATCTCG+AGG + chr8.1:349067-349086 None:intergenic 35.0%
! CTAGCTAGCTACTATTGTTT+TGG + chr8.1:349593-349612 None:intergenic 35.0%
! GTGTAACAACTTCTGGTTAT+TGG - chr8.1:349104-349123 MS.gene012781:intron 35.0%
! TATATGATGATGAGCAGCTT+TGG - chr8.1:349006-349025 MS.gene012781:CDS 35.0%
!! ATGATGATGGTCGTGTAATT+GGG + chr8.1:350135-350154 None:intergenic 35.0%
!! CGAGATAGAAAGTATCGAAA+CGG - chr8.1:349067-349086 MS.gene012781:CDS 35.0%
!! TCCAGAATTGCTTTAGGAAA+GGG + chr8.1:348771-348790 None:intergenic 35.0%
!! TGATGATGGATGATCTCAAT+AGG - chr8.1:350563-350582 MS.gene012781:intron 35.0%
!! TTCCAGAATTGCTTTAGGAA+AGG + chr8.1:348772-348791 None:intergenic 35.0%
AAAATGGAAGGAAGCAGTAG+CGG - chr8.1:350271-350290 MS.gene012781:intron 40.0%
ACTAGTACAATATGCAGCTG+CGG - chr8.1:350432-350451 MS.gene012781:intron 40.0%
AGGGTTTCCAGAATTGCTTT+AGG + chr8.1:348777-348796 None:intergenic 40.0%
ATATACCAGGAAGTTCCCAA+GGG + chr8.1:348671-348690 None:intergenic 40.0%
ATCATGTCACAACCACTCTT+GGG - chr8.1:350305-350324 MS.gene012781:intron 40.0%
ATCTTTATCGCTATGACCCT+TGG - chr8.1:348652-348671 MS.gene012781:CDS 40.0%
CCAAATAGAACTGCTCTTGA+TGG - chr8.1:349354-349373 MS.gene012781:intron 40.0%
CCAGAAGTTGTTACACGATT+AGG + chr8.1:349100-349119 None:intergenic 40.0%
CCATCAAGAGCAGTTCTATT+TGG + chr8.1:349357-349376 None:intergenic 40.0%
CCTAATCGTGTAACAACTTC+TGG - chr8.1:349097-349116 MS.gene012781:intron 40.0%
GAGGGATGGGAACAAAAAAA+AGG + chr8.1:348797-348816 None:intergenic 40.0%
GATATCGTTCGGTTTCATGT+TGG + chr8.1:349267-349286 None:intergenic 40.0%
GCATATTGTACTAGTTGCCT+AGG + chr8.1:350427-350446 None:intergenic 40.0%
GGATTTGGATGATTGAGATG+TGG + chr8.1:350634-350653 None:intergenic 40.0%
TACCGTTCAGAAGATGAAGA+AGG - chr8.1:350364-350383 MS.gene012781:intron 40.0%
TAGAAGCCAAGAATGCAAGA+GGG - chr8.1:349672-349691 MS.gene012781:intron 40.0%
TATATACCAGGAAGTTCCCA+AGG + chr8.1:348672-348691 None:intergenic 40.0%
TATCGTTCGGTTTCATGTTG+GGG + chr8.1:349265-349284 None:intergenic 40.0%
TCTACAAGCTCTTCTTCAGT+TGG + chr8.1:348570-348589 None:intergenic 40.0%
TCTCTTGTATACCCGACATA+GGG + chr8.1:350074-350093 None:intergenic 40.0%
TCTGAACGGTAATTAGTAGG+AGG + chr8.1:350355-350374 None:intergenic 40.0%
TCTGGTTATTGGAAAGCAAC+AGG - chr8.1:349115-349134 MS.gene012781:intron 40.0%
TCTTTATCGCTATGACCCTT+GGG - chr8.1:348653-348672 MS.gene012781:CDS 40.0%
TGATTATGATCCTCAGGGAT+TGG + chr8.1:350742-350761 None:intergenic 40.0%
TTAGAAGCCAAGAATGCAAG+AGG - chr8.1:349671-349690 MS.gene012781:intron 40.0%
! TATTCTGGAAAAGCTCCCAA+AGG - chr8.1:349202-349221 MS.gene012781:intron 40.0%
!! AGGTGTTGTTACTACTGTTG+GGG + chr8.1:350765-350784 None:intergenic 40.0%
!! CCAGAATTGCTTTAGGAAAG+GGG + chr8.1:348770-348789 None:intergenic 40.0%
!! GAGGTGTTGTTACTACTGTT+GGG + chr8.1:350766-350785 None:intergenic 40.0%
!! GATGATGATGGTCGTGTAAT+TGG + chr8.1:350136-350155 None:intergenic 40.0%
!! GTACCTCTTGATGATGATGA+TGG + chr8.1:350148-350167 None:intergenic 40.0%
!! GTTTTGGTGTGCTATAGCTT+TGG + chr8.1:349577-349596 None:intergenic 40.0%
!! TCATTTTGATAGTCCAGTGC+AGG - chr8.1:349911-349930 MS.gene012781:CDS 40.0%
!! TTGGGAATGGGATTTGTTGT+TGG - chr8.1:350211-350230 MS.gene012781:intron 40.0%
AAGCTCATGCTGCTCATGTT+AGG + chr8.1:348417-348436 None:intergenic 45.0%
AGCTACAGCTACAGTAGTAG+TGG - chr8.1:348488-348507 MS.gene012781:CDS 45.0%
AGGGTGAGATATCCCTATGT+CGG - chr8.1:350059-350078 MS.gene012781:CDS 45.0%
ATCCATCATCATTGCAGCAC+TGG + chr8.1:350554-350573 None:intergenic 45.0%
ATGAGCTTGAGTCACGAAGA+TGG - chr8.1:348429-348448 MS.gene012781:CDS 45.0%
CAAGCTCTTCTTCAGTTGGA+TGG + chr8.1:348566-348585 None:intergenic 45.0%
CCCCTTTCCTAAAGCAATTC+TGG - chr8.1:348767-348786 MS.gene012781:CDS 45.0%
CGACCATCATCATCATCAAG+AGG - chr8.1:350142-350161 MS.gene012781:intron 45.0%
CTAGTACAATATGCAGCTGC+GGG - chr8.1:350433-350452 MS.gene012781:intron 45.0%
CTCTCTTGTATACCCGACAT+AGG + chr8.1:350075-350094 None:intergenic 45.0%
GAACGGTAATTAGTAGGAGG+AGG + chr8.1:350352-350371 None:intergenic 45.0%
GATCATGTCACAACCACTCT+TGG - chr8.1:350304-350323 MS.gene012781:intron 45.0%
GTGTAATTGGGAGACAACGA+GGG + chr8.1:350123-350142 None:intergenic 45.0%
TACCAGTGCTGCAATGATGA+TGG - chr8.1:350549-350568 MS.gene012781:intron 45.0%
TGAAGCTGAGACTGGGAAAA+TGG + chr8.1:350497-350516 None:intergenic 45.0%
TGGGGTGATTATGATCCTCA+GGG + chr8.1:350747-350766 None:intergenic 45.0%
TTGGGGTGATTATGATCCTC+AGG + chr8.1:350748-350767 None:intergenic 45.0%
! AACGTTTTCCCTCGACCTTA+CGG + chr8.1:348605-348624 None:intergenic 45.0%
!! AGGAGGAGTATTGCTGTACT+TGG + chr8.1:350335-350354 None:intergenic 45.0%
!! GGAGGTGTTGTTACTACTGT+TGG + chr8.1:350767-350786 None:intergenic 45.0%
AATTGGGAGACAACGAGGGA+GGG + chr8.1:350119-350138 None:intergenic 50.0%
AGAGTTCTACCTTCGCCGTA+AGG - chr8.1:348587-348606 MS.gene012781:CDS 50.0%
AGCAGCAGCAACATCAACCT+AGG - chr8.1:350407-350426 MS.gene012781:intron 50.0%
AGCATGACGTGGTTATGCCA+GGG - chr8.1:348532-348551 MS.gene012781:CDS 50.0%
AGCTAGCTGCGTGAAACTTG+CGG - chr8.1:349607-349626 MS.gene012781:intron 50.0%
CGTGTAATTGGGAGACAACG+AGG + chr8.1:350124-350143 None:intergenic 50.0%
CTCTCTCCCTCTTGCATTCT+TGG + chr8.1:349681-349700 None:intergenic 50.0%
GGAAAGCAACAGGAGCAGAT+AGG - chr8.1:349125-349144 MS.gene012781:intron 50.0%
GGGTGAGATATCCCTATGTC+GGG - chr8.1:350060-350079 MS.gene012781:CDS 50.0%
GTACAGTAGTCTACCTGCAC+TGG + chr8.1:349927-349946 None:intergenic 50.0%
GTACTTGGAAAGCCCAAGAG+TGG + chr8.1:350320-350339 None:intergenic 50.0%
GTTGGATGGAAACGAAACCC+TGG + chr8.1:348552-348571 None:intergenic 50.0%
TAATTGGGAGACAACGAGGG+AGG + chr8.1:350120-350139 None:intergenic 50.0%
TATGACCCTTGGGAACTTCC+TGG - chr8.1:348663-348682 MS.gene012781:CDS 50.0%
TGAGAGAGAGAGAGAGAGAG+AGG + chr8.1:349809-349828 None:intergenic 50.0%
TGATGATCACGAGCATGACG+TGG - chr8.1:348521-348540 MS.gene012781:CDS 50.0%
TGTCGGGTATACAAGAGAGC+AGG - chr8.1:350076-350095 MS.gene012781:CDS 50.0%
TTGGATTCCAGTCCCACAGT+CGG + chr8.1:350723-350742 None:intergenic 50.0%
TTTCCCAGTCTCAGCTTCAG+CGG - chr8.1:350498-350517 MS.gene012781:intron 50.0%
TTTGGCAGCAATCGGAGAGA+AGG - chr8.1:349024-349043 MS.gene012781:CDS 50.0%
! TCTCTGTTAGTCTCCGCTTG+TGG - chr8.1:350460-350479 MS.gene012781:intron 50.0%
! TGAGCAGCTTTGGCAGCAAT+CGG - chr8.1:349016-349035 MS.gene012781:CDS 50.0%
!! CAACTGGTTCGGATGCCTTT+GGG + chr8.1:349220-349239 None:intergenic 50.0%
!! TGCAGCACTGGTAGCAGTAT+TGG + chr8.1:350542-350561 None:intergenic 50.0%
AGTCGGTCAGAGAAGGAGGT+TGG + chr8.1:350706-350725 None:intergenic 55.0%
ATGGAAGGAAGCAGTAGCGG+CGG - chr8.1:350274-350293 MS.gene012781:intron 55.0%
ATGGCAATAGCAGCAGCAGG+AGG - chr8.1:348375-348394 MS.gene012781:CDS 55.0%
CAGCAATCGGAGAGAAGGAG+TGG - chr8.1:349029-349048 MS.gene012781:CDS 55.0%
CTCCTTCTCTGACCGACTGT+GGG - chr8.1:350708-350727 MS.gene012781:CDS 55.0%
GAGCATGACGTGGTTATGCC+AGG - chr8.1:348531-348550 MS.gene012781:CDS 55.0%
GGACTGGAATCCAATCCCTG+AGG - chr8.1:350729-350748 MS.gene012781:CDS 55.0%
TACCTTCGCCGTAAGGTCGA+GGG - chr8.1:348594-348613 MS.gene012781:CDS 55.0%
TTAGTCTCCGCTTGTGGTGG+CGG - chr8.1:350466-350485 MS.gene012781:intron 55.0%
! CTGTTAGTCTCCGCTTGTGG+TGG - chr8.1:350463-350482 MS.gene012781:intron 55.0%
!! CCAAAGGCATCCGAACCAGT+TGG - chr8.1:349218-349237 MS.gene012781:intron 55.0%
!! CCAACTGGTTCGGATGCCTT+TGG + chr8.1:349221-349240 None:intergenic 55.0%
CCACAGTCGGTCAGAGAAGG+AGG + chr8.1:350710-350729 None:intergenic 60.0%
CCTCCTTCTCTGACCGACTG+TGG - chr8.1:350707-350726 MS.gene012781:CDS 60.0%
CTACCTTCGCCGTAAGGTCG+AGG - chr8.1:348593-348612 MS.gene012781:CDS 60.0%
CTGCCGCTGAAGCTGAGACT+GGG + chr8.1:350504-350523 None:intergenic 60.0%
GTCCCACAGTCGGTCAGAGA+AGG + chr8.1:350713-350732 None:intergenic 60.0%
TCTCTGACCGACTGTGGGAC+TGG - chr8.1:350713-350732 MS.gene012781:CDS 60.0%
TTCCCTCGACCTTACGGCGA+AGG + chr8.1:348599-348618 None:intergenic 60.0%
GCTGCCGCTGAAGCTGAGAC+TGG + chr8.1:350505-350524 None:intergenic 65.0%
GGGAGACAACGAGGGAGGGA+GGG + chr8.1:350115-350134 None:intergenic 65.0%
TGGGAGACAACGAGGGAGGG+AGG + chr8.1:350116-350135 None:intergenic 65.0%
GGCGCTGCCGCCACCACAAG+CGG + chr8.1:350476-350495 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 348375 350795 348375 ID=MS.gene012781
chr8.1 mRNA 348375 350795 348375 ID=MS.gene012781.t1;Parent=MS.gene012781
chr8.1 exon 350567 350795 350567 ID=MS.gene012781.t1.exon1;Parent=MS.gene012781.t1
chr8.1 CDS 350567 350795 350567 ID=cds.MS.gene012781.t1;Parent=MS.gene012781.t1
chr8.1 exon 349879 350147 349879 ID=MS.gene012781.t1.exon2;Parent=MS.gene012781.t1
chr8.1 CDS 349879 350147 349879 ID=cds.MS.gene012781.t1;Parent=MS.gene012781.t1
chr8.1 exon 348375 349109 348375 ID=MS.gene012781.t1.exon3;Parent=MS.gene012781.t1
chr8.1 CDS 348375 349109 348375 ID=cds.MS.gene012781.t1;Parent=MS.gene012781.t1
Gene Sequence

>MS.gene012781

ATGGCAATAGCAGCAGCAGGAGGAGCAGCAACATCATCACCTAACATGAGCAGCATGAGCTTGAGTCACGAAGATGGAACTGCTACTACTTCTAACGATAATAGTAACAAAGGAGCTACAGCTACAGTAGTAGTGGATGATGATGATGATGATCACGAGCATGACGTGGTTATGCCAGGGTTTCGTTTCCATCCAACTGAAGAAGAGCTTGTAGAGTTCTACCTTCGCCGTAAGGTCGAGGGAAAACGTTTCAACGTTGAGCTTATTACTTTTCTCGATCTTTATCGCTATGACCCTTGGGAACTTCCTGGTATATATTTATTTATATTTATAGTCATGCTCACACTCATCACATATTTATATAATAATTATAATTATATATATGAGAACTTCCCCTTTCCTAAAGCAATTCTGGAAACCCTTTTTTTTGTTCCCATCCCTCTTTGATTTAATAATATAATAATACTTCTTTTTTGATAAATAAATATCTTGGCTCCCTTACTTATTTGCTTCATATTTATTTGCATACAAATTAAGAGAAACGTGCGTGAGTCTATTTAATTTAATAATTCACTTCACATATATTTAATTATGTGATTGAATTTTGAGGTGGAATTTGATATTTGAATTGTATATGATGATGAGCAGCTTTGGCAGCAATCGGAGAGAAGGAGTGGTACTTTTATGTGCCTCGAGATAGAAAGTATCGAAACGGTGATCGTCCTAATCGTGTAACAACTTCTGGTTATTGGAAAGCAACAGGAGCAGATAGGATGATTCGAACTGAAAACTTTCGTTCAATTGGACTCAAGAAAACCCTAGTTTTCTATTCTGGAAAAGCTCCCAAAGGCATCCGAACCAGTTGGATTATGAATGAGTATAGATTACCCCAACATGAAACCGAACGATATCAAAAGGTATATAATATTTCAGATTCTTTATACTTTAAATAATATGAATAATTACTTCTCCTTAATTACCAAATAGAACTGCTCTTGATGGAGTTAATTCATTACTGATTTTTCTTTCATGGTGTATATGAATGAATATATTGAAACCGTGTCTTTGTTGGTTTTAAAAAACTCAACCCTAGTTTTAAAGAGCTATATTATATATTATGCATCTTGATTTTGGGTCGTCTTTTTCAGAATCCATAAATATATAGTATACACACGCTTGATTTCTAACTAATCATAGATCCAAAGCTATAGCACACCAAAACAATAGTAGCTAGCTAGCTGCGTGAAACTTGCGGCCACCAGCCATATAGCATATATATATATATATTCAAATTAGTTAGAAGCCAAGAATGCAAGAGGGAGAGAGTGAGCAATTAATTATTACGTGATAGAAATTAAAGAAAGAAAGAGAGTACAAACAGTGCCTAAAATATATTCATATACAACAACTATCACCGTTTGTGATTAATTACCTCTCTCTCTCTCTCTCTCTCATACATACATACACATGTACTATTTCATGCATGAATTTCAAAATTCTGACCACAAATTAATTAATTCCTTTCATCTCTCGTGATCATTTTGATAGTCCAGTGCAGGTAGACTACTGTACGTTTTATTTTCAAATTTCTTTCAACAATTTAATTAGTGTATATGTTCATTCAAATATGAAATGTATGCCAAATTTTGGATCCTTACAATAATTTTGAATTTGAATTTGAATTAGGGTGAGATATCCCTATGTCGGGTATACAAGAGAGCAGGAGTAGAAGATCATCCCTCCCTCCCTCGTTGTCTCCCAATTACACGACCATCATCATCATCAAGAGGTACTACTGCTTCACATTCAGACAAGAATAAGCAGCAAAATGAAATATTGGGAATGGGATTTGTTGTTGGACAATCACCAAAGACAATTGATGATCACATAGTTAACAAAATGGAAGGAAGCAGTAGCGGCGGTAATTCAGATCATGTCACAACCACTCTTGGGCTTTCCAAGTACAGCAATACTCCTCCTCCTACTAATTACCGTTCAGAAGATGAAGAAGGATTGATGATGATGCAGCAGCAGCAGCAGCAACATCAACCTAGGCAACTAGTACAATATGCAGCTGCGGGAAACTCTCTGTTAGTCTCCGCTTGTGGTGGCGGCAGCGCCATTTTCCCAGTCTCAGCTTCAGCGGCAGCAGCAGTGAGCTGTTCCAATACTGCTACCAGTGCTGCAATGATGATGGATGATCTCAATAGGCTTGTAAGTTATCAACAACAGCAATATTGTTACAATGTTCAAAACCCACATCTCAATCATCCAAATCCCAATCATTTGTCTACATTGCTGATGCAACCAATGTTACCAAATCAATTTCCAACCTCCTTCTCTGACCGACTGTGGGACTGGAATCCAATCCCTGAGGATCATAATCACCCCAACAGTAGTAACAACACCTCCTTCAAGTAA
Protein sequence

>MS.gene012781.t1

MAIAAAGGAATSSPNMSSMSLSHEDGTATTSNDNSNKGATATVVVDDDDDDHEHDVVMPGFRFHPTEEELVEFYLRPLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSSRGTTASHSDKNKQQNEILGMGFVVGQSPKTIDDHIVNKMEGSSSGGNSDHVTTTLGLSKYSNTPPPTNYRSEDEEGLMMMQQQQQQHQPRQLVQYAAAGNSLLVSACGGGSAIFPVSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQQQYCYNVQNPHLNHPNPNHLSTLLMQPMLPNQFPTSFSDRLWDWNPIPEDHNHPNSSNNTSFK