Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012784.t1 | Q40359.1 | 99.2 | 257 | 2 | 0 | 1 | 257 | 1 | 257 | 4.60E-139 | 503.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012784.t1 | Q40359 | 99.2 | 257 | 2 | 0 | 1 | 257 | 1 | 257 | 1.1e-141 | 503.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012784.t1 | A0A072UTR5 | 98.4 | 257 | 3 | 1 | 1 | 257 | 1 | 256 | 4.4e-139 | 503.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene012784.t1 | TF | Alfin-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012784.t1 | MTR_4g134510 | 99.222 | 257 | 1 | 1 | 1 | 257 | 1 | 256 | 0.0 | 528 |
| MS.gene012784.t1 | MTR_8g019520 | 71.311 | 244 | 70 | 0 | 10 | 253 | 9 | 252 | 3.76e-111 | 320 |
| MS.gene012784.t1 | MTR_8g019520 | 69.796 | 245 | 73 | 1 | 10 | 253 | 9 | 253 | 3.85e-111 | 320 |
| MS.gene012784.t1 | MTR_1g015185 | 67.589 | 253 | 75 | 2 | 10 | 255 | 10 | 262 | 4.12e-105 | 305 |
| MS.gene012784.t1 | MTR_2g040990 | 68.548 | 248 | 69 | 4 | 10 | 255 | 12 | 252 | 2.24e-104 | 303 |
| MS.gene012784.t1 | MTR_2g099500 | 67.194 | 253 | 77 | 2 | 1 | 253 | 1 | 247 | 3.70e-103 | 300 |
| MS.gene012784.t1 | MTR_7g068590 | 62.302 | 252 | 84 | 5 | 4 | 255 | 1 | 241 | 2.12e-93 | 275 |
| MS.gene012784.t1 | MTR_4g015830 | 62.302 | 252 | 82 | 6 | 4 | 255 | 1 | 239 | 9.59e-92 | 271 |
| MS.gene012784.t1 | MTR_1g015185 | 84.444 | 135 | 21 | 0 | 10 | 144 | 10 | 144 | 8.17e-72 | 219 |
| MS.gene012784.t1 | MTR_8g066480 | 41.912 | 136 | 59 | 3 | 121 | 255 | 29 | 145 | 3.61e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012784.t1 | AT2G02470 | 78.764 | 259 | 47 | 5 | 1 | 255 | 1 | 255 | 2.68e-129 | 366 |
| MS.gene012784.t1 | AT1G14510 | 78.261 | 253 | 50 | 3 | 1 | 253 | 1 | 248 | 6.62e-127 | 360 |
| MS.gene012784.t1 | AT2G02470 | 76.357 | 258 | 46 | 5 | 1 | 255 | 1 | 246 | 3.39e-123 | 350 |
| MS.gene012784.t1 | AT5G20510 | 67.181 | 259 | 81 | 3 | 1 | 255 | 1 | 259 | 1.23e-110 | 319 |
| MS.gene012784.t1 | AT3G42790 | 66.275 | 255 | 80 | 3 | 1 | 255 | 1 | 249 | 1.16e-108 | 314 |
| MS.gene012784.t1 | AT5G05610 | 63.347 | 251 | 79 | 5 | 5 | 255 | 3 | 240 | 1.20e-95 | 281 |
| MS.gene012784.t1 | AT5G05610 | 63.347 | 251 | 79 | 5 | 5 | 255 | 3 | 240 | 1.20e-95 | 281 |
| MS.gene012784.t1 | AT5G26210 | 67.331 | 251 | 72 | 3 | 10 | 255 | 9 | 254 | 3.51e-93 | 275 |
| MS.gene012784.t1 | AT3G11200 | 63.137 | 255 | 84 | 4 | 1 | 255 | 1 | 245 | 5.25e-89 | 264 |
| MS.gene012784.t1 | AT5G20510 | 66.512 | 215 | 68 | 3 | 45 | 255 | 4 | 218 | 4.61e-86 | 255 |
| MS.gene012784.t1 | AT2G02470 | 82.317 | 164 | 25 | 3 | 1 | 164 | 1 | 160 | 3.82e-84 | 252 |
| MS.gene012784.t1 | AT3G11200 | 62.844 | 218 | 71 | 4 | 38 | 255 | 25 | 232 | 6.61e-75 | 228 |
| MS.gene012784.t1 | AT5G20510 | 72.561 | 164 | 43 | 2 | 1 | 162 | 1 | 164 | 8.41e-74 | 223 |
Find 76 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGCTGTTGCTTTCTATTT+TGG | 0.091188 | 8.1:-326076 | MS.gene012784:CDS |
| AAGGAGAATTTGTGCCTCTA+TGG | 0.272744 | 8.1:-326250 | MS.gene012784:CDS |
| GTTCAGAGCTATCCAATTCT+TGG | 0.273239 | 8.1:+323790 | None:intergenic |
| ATTATGGCACCGATGAATTC+TGG | 0.291624 | 8.1:-323924 | MS.gene012784:CDS |
| TTCACTTCCCATGTTTCATT+TGG | 0.302703 | 8.1:+326223 | None:intergenic |
| TTTGGTGCCCGCTTTGGATT+TGG | 0.319624 | 8.1:-326058 | MS.gene012784:CDS |
| TTGGATTTGGTAAGAATGAT+AGG | 0.350809 | 8.1:-326045 | MS.gene012784:intron |
| TCTTCAACAGTTCGAGGTAC+TGG | 0.366061 | 8.1:+327159 | None:intergenic |
| ACATCTTCACACCCTTGGTC+TGG | 0.386000 | 8.1:+324037 | None:intergenic |
| TCAGGAGGCACTTCCTCAAC+AGG | 0.419078 | 8.1:+326196 | None:intergenic |
| ACAGTCTTTGAGCTTGCAAC+AGG | 0.426181 | 8.1:-324254 | MS.gene012784:CDS |
| GGTGCTTGTGGTGATAATTA+TGG | 0.428882 | 8.1:-323940 | MS.gene012784:CDS |
| CATTGGGTATAAACTTTGCT+CGG | 0.446703 | 8.1:-326159 | MS.gene012784:CDS |
| AGTATCAAGAAGCCAAGAAT+TGG | 0.452358 | 8.1:-323802 | MS.gene012784:CDS |
| AAAACTTCTTCAACAGTTCG+AGG | 0.455840 | 8.1:+327153 | None:intergenic |
| AATGCTGGCTCGGGAAGTTC+AGG | 0.456279 | 8.1:+326178 | None:intergenic |
| CTGTCAACCTCTTCTTTGAC+CGG | 0.460633 | 8.1:+324009 | None:intergenic |
| GGCTTCTTGATACTGCAGCC+AGG | 0.465655 | 8.1:+323811 | None:intergenic |
| TGAACTTCCCGAGCCAGCAT+TGG | 0.471886 | 8.1:-326176 | MS.gene012784:CDS |
| GTTTATACCCAATGCTGGCT+CGG | 0.475497 | 8.1:+326168 | None:intergenic |
| CTTTGCTCGGGATGGAATGC+AGG | 0.478727 | 8.1:-326146 | MS.gene012784:CDS |
| GGTTGACAGTGGAGAAGAAG+AGG | 0.483798 | 8.1:-323995 | MS.gene012784:CDS |
| CTTCAACAGTTCGAGGTACT+GGG | 0.484890 | 8.1:+327160 | None:intergenic |
| TGCAGACATCTTCACACCCT+TGG | 0.486335 | 8.1:+324032 | None:intergenic |
| CATCTTCACACCCTTGGTCT+GGG | 0.494259 | 8.1:+324038 | None:intergenic |
| AGGAGAATTTGTGCCTCTAT+GGG | 0.495200 | 8.1:-326249 | MS.gene012784:CDS |
| GAACTTCCCGAGCCAGCATT+GGG | 0.495975 | 8.1:-326175 | MS.gene012784:CDS |
| TTGATGTGTTCAGCCTTGGC+AGG | 0.497341 | 8.1:+323847 | None:intergenic |
| TTGATCAAAGCTCTCACTAC+TGG | 0.498155 | 8.1:-327102 | MS.gene012784:intron |
| GGTATAAACTTTGCTCGGGA+TGG | 0.501826 | 8.1:-326154 | MS.gene012784:CDS |
| TTGCTTGATGTGTTCAGCCT+TGG | 0.502589 | 8.1:+323843 | None:intergenic |
| TTTATACCCAATGCTGGCTC+GGG | 0.504159 | 8.1:+326169 | None:intergenic |
| ATTGGGTATAAACTTTGCTC+GGG | 0.520391 | 8.1:-326158 | MS.gene012784:CDS |
| AGTGAGAGCTTTGATCAAAC+CGG | 0.520678 | 8.1:+327107 | None:intergenic |
| CATTGTTGTGAGCAGTCAGT+TGG | 0.529254 | 8.1:+324210 | None:intergenic |
| GCTTCTTGATACTGCAGCCA+GGG | 0.530817 | 8.1:+323812 | None:intergenic |
| ACTAACCGGGATCGCAGAGC+TGG | 0.531212 | 8.1:+326973 | None:intergenic |
| AAATTGAAATTGAGGATGGA+AGG | 0.531943 | 8.1:-327195 | None:intergenic |
| GAAATTGAGGATGGAAGGAA+TGG | 0.537738 | 8.1:-327190 | None:intergenic |
| CCTTGGTCTGGGATTCAGAC+TGG | 0.538724 | 8.1:+324049 | None:intergenic |
| TTGCAGTTCACAGTGACTCA+TGG | 0.543636 | 8.1:-326102 | MS.gene012784:CDS |
| GTTGTGATATGTGCGAGAAA+TGG | 0.560529 | 8.1:-323897 | MS.gene012784:CDS |
| TTTCATTTGGAAACCCATAG+AGG | 0.561848 | 8.1:+326236 | None:intergenic |
| GCAAAGTTTATACCCAATGC+TGG | 0.563847 | 8.1:+326163 | None:intergenic |
| GGAGAAGGACTGGTTATCAC+TGG | 0.565404 | 8.1:-326125 | MS.gene012784:CDS |
| TCGGGATGGAATGCAGGAGA+AGG | 0.567649 | 8.1:-326140 | MS.gene012784:CDS |
| ATGGGTTTCCAAATGAAACA+TGG | 0.572525 | 8.1:-326231 | MS.gene012784:CDS |
| ATTATCACCACAAGCACCAC+AGG | 0.573675 | 8.1:+323945 | None:intergenic |
| ATCAAGCAATACAAGTGCCC+TGG | 0.578416 | 8.1:-323829 | MS.gene012784:CDS |
| GGTCTGGGATTCAGACTGGC+GGG | 0.580455 | 8.1:+324053 | None:intergenic |
| TGTTAAAATTACTCCTGCCA+AGG | 0.581201 | 8.1:-323860 | MS.gene012784:CDS |
| ATGGAATGCAGGAGAAGGAC+TGG | 0.581252 | 8.1:-326135 | MS.gene012784:CDS |
| CAAATACAAATCAAGTGGAA+AGG | 0.584281 | 8.1:-324177 | MS.gene012784:intron |
| TGTTGCAAGCTCAAAGACTG+TGG | 0.590482 | 8.1:+324256 | None:intergenic |
| ATTCTTACCAAATCCAAAGC+GGG | 0.591224 | 8.1:+326051 | None:intergenic |
| AATAGCAAATACAAATCAAG+TGG | 0.591787 | 8.1:-324182 | MS.gene012784:CDS |
| GAGGATGGAAGGAATGGCAC+AGG | 0.593067 | 8.1:-327184 | None:intergenic |
| GTCTGCACCGGTCAAAGAAG+AGG | 0.597402 | 8.1:-324016 | MS.gene012784:CDS |
| TGGTCTGGGATTCAGACTGG+CGG | 0.601563 | 8.1:+324052 | None:intergenic |
| GGGTGTGAAGATGTCTGCAC+CGG | 0.601595 | 8.1:-324028 | MS.gene012784:CDS |
| TGGGTTTCCAAATGAAACAT+GGG | 0.604798 | 8.1:-326230 | MS.gene012784:CDS |
| GATTACAAAGGCAGACGCGC+CGG | 0.610248 | 8.1:-327126 | MS.gene012784:CDS |
| GGTGCAACCTGTGGTGCTTG+TGG | 0.611921 | 8.1:-323952 | MS.gene012784:CDS |
| GTTGCAAGCTCAAAGACTGT+GGG | 0.616342 | 8.1:+324257 | None:intergenic |
| GGAAGTGAACTTGCCTGTTG+AGG | 0.623158 | 8.1:-326209 | MS.gene012784:CDS |
| AGGAACTGCTAAGCAATCAA+AGG | 0.625294 | 8.1:-324234 | MS.gene012784:CDS |
| ATGTGCGAGAAATGGTTCCA+TGG | 0.628526 | 8.1:-323889 | MS.gene012784:CDS |
| CAGTCTGAATCCCAGACCAA+GGG | 0.635249 | 8.1:-324048 | MS.gene012784:CDS |
| ACAACAGATCCAGAATTCAT+CGG | 0.639218 | 8.1:+323915 | None:intergenic |
| CCAGTCTGAATCCCAGACCA+AGG | 0.643258 | 8.1:-324049 | MS.gene012784:CDS |
| CAACTGACTGCTCACAACAA+TGG | 0.646947 | 8.1:-324209 | MS.gene012784:CDS |
| GCTGGCTCGGGAAGTTCAGG+AGG | 0.654216 | 8.1:+326181 | None:intergenic |
| GTCAAAGAAGAGGTTGACAG+TGG | 0.669063 | 8.1:-324006 | MS.gene012784:CDS |
| GAAGAAGATGATGATGAACA+AGG | 0.695245 | 8.1:-323973 | MS.gene012784:CDS |
| GATGAACAAGGTGCAACCTG+TGG | 0.715909 | 8.1:-323961 | MS.gene012784:CDS |
| CATTCTTACCAAATCCAAAG+CGG | 0.722080 | 8.1:+326050 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAGAAAAAAGAAAAAA+AGG | + | chr8.1:324106-324125 | None:intergenic | 10.0% |
| !! | CATAAAATAAAAATATGAAA+TGG | + | chr8.1:326838-326857 | None:intergenic | 10.0% |
| !!! | TTTAAACAATAACTTTTTAT+GGG | + | chr8.1:324663-324682 | None:intergenic | 10.0% |
| !! | ATTTAGGAAATTTAGTTATA+TGG | - | chr8.1:326227-326246 | MS.gene012784:CDS | 15.0% |
| !!! | CTTTAAACAATAACTTTTTA+TGG | + | chr8.1:324664-324683 | None:intergenic | 15.0% |
| !!! | TATTTCTTTTGCAAAATAAT+TGG | - | chr8.1:326496-326515 | MS.gene012784:intron | 15.0% |
| !! | AGAATAATGATTAGTGTAAT+TGG | - | chr8.1:325876-325895 | MS.gene012784:intron | 20.0% |
| !! | ATAAAACCAATAATGCTATA+TGG | - | chr8.1:325940-325959 | MS.gene012784:intron | 20.0% |
| !! | TAAAACCAATAATGCTATAT+GGG | - | chr8.1:325941-325960 | MS.gene012784:intron | 20.0% |
| !! | TGTACGTGATATTAATATTT+AGG | - | chr8.1:326630-326649 | MS.gene012784:intron | 20.0% |
| !! | TTTATCACAAAACAACAAAA+AGG | - | chr8.1:325508-325527 | MS.gene012784:intron | 20.0% |
| !!! | TAATTTTAACACATTTACCA+TGG | + | chr8.1:327109-327128 | None:intergenic | 20.0% |
| !!! | TATAGCATTATTGGTTTTAT+AGG | + | chr8.1:325940-325959 | None:intergenic | 20.0% |
| !!! | TTAGGATTTTCATCTAATTT+TGG | - | chr8.1:326648-326667 | MS.gene012784:intron | 20.0% |
| ! | AAATGGTTATTTACAGGAAA+AGG | - | chr8.1:326674-326693 | MS.gene012784:intron | 25.0% |
| ! | AATAAGAGGACAAAACAAAA+TGG | + | chr8.1:324371-324390 | None:intergenic | 25.0% |
| ! | AATAGCAAATACAAATCAAG+TGG | - | chr8.1:326796-326815 | MS.gene012784:intron | 25.0% |
| ! | AGGGATAAAAGAAAAACTTT+AGG | - | chr8.1:326197-326216 | MS.gene012784:CDS | 25.0% |
| ! | AGTATATATCTCAAAGATGA+CGG | + | chr8.1:326373-326392 | None:intergenic | 25.0% |
| ! | CAAGCAAAAAAGTAACAAAA+TGG | - | chr8.1:325478-325497 | MS.gene012784:intron | 25.0% |
| ! | GGTTGAAAATGAAAAAACAA+GGG | + | chr8.1:325534-325553 | None:intergenic | 25.0% |
| ! | TACAACACAAAAATCAACAT+GGG | - | chr8.1:325287-325306 | MS.gene012784:intron | 25.0% |
| ! | TCAAAAAGCCATATTTCTTA+AGG | - | chr8.1:326550-326569 | MS.gene012784:intron | 25.0% |
| ! | TGGTTGAAAATGAAAAAACA+AGG | + | chr8.1:325535-325554 | None:intergenic | 25.0% |
| ! | TGTAGACAAACATGAAAAAT+TGG | - | chr8.1:325144-325163 | MS.gene012784:intron | 25.0% |
| ! | TTACAACACAAAAATCAACA+TGG | - | chr8.1:325286-325305 | MS.gene012784:intron | 25.0% |
| ! | TTTGCAAAATAATTGGCATA+GGG | - | chr8.1:326503-326522 | MS.gene012784:intron | 25.0% |
| !! | AATGAAGGTATATTGGTAAT+AGG | + | chr8.1:324412-324431 | None:intergenic | 25.0% |
| !! | TTTTATGGGTTTTTCCTATT+GGG | + | chr8.1:324649-324668 | None:intergenic | 25.0% |
| !! | TTTTGCAAAATAATTGGCAT+AGG | - | chr8.1:326502-326521 | MS.gene012784:intron | 25.0% |
| !! | TTTTTATGGGTTTTTCCTAT+TGG | + | chr8.1:324650-324669 | None:intergenic | 25.0% |
| !!! | AAAATTGTAGCATTTTAAGG+CGG | + | chr8.1:324298-324317 | None:intergenic | 25.0% |
| !!! | AAAGATGACGGATTAAAATT+GGG | + | chr8.1:326361-326380 | None:intergenic | 25.0% |
| !!! | ATTATCATCTCTAAAACACT+CGG | + | chr8.1:326005-326024 | None:intergenic | 25.0% |
| !!! | TCATCTAATTTTGGTTGAAA+TGG | - | chr8.1:326657-326676 | MS.gene012784:intron | 25.0% |
| AACTTTAGGTCAACTCATTT+AGG | - | chr8.1:326211-326230 | MS.gene012784:CDS | 30.0% | |
| AAGAAAAAAAGGAAAACCCT+AGG | + | chr8.1:324095-324114 | None:intergenic | 30.0% | |
| AATCCATAACTTTCTCAACA+AGG | + | chr8.1:325254-325273 | None:intergenic | 30.0% | |
| AATGCATATTGCTAGAAATC+TGG | - | chr8.1:326587-326606 | MS.gene012784:intron | 30.0% | |
| ATCCATAACTTTCTCAACAA+GGG | + | chr8.1:325253-325272 | None:intergenic | 30.0% | |
| ATCGAATGTACAAAATGATG+GGG | - | chr8.1:325805-325824 | MS.gene012784:intron | 30.0% | |
| ATGAGTGGTTACATAAGATT+AGG | - | chr8.1:326034-326053 | MS.gene012784:intron | 30.0% | |
| ATGATAGTCCAATCAAGAAT+TGG | - | chr8.1:326461-326480 | MS.gene012784:intron | 30.0% | |
| ATGATTAGTGTAATTGGCAT+TGG | - | chr8.1:325882-325901 | MS.gene012784:intron | 30.0% | |
| ATGCTTAAAAAATGTGGCAT+GGG | + | chr8.1:324253-324272 | None:intergenic | 30.0% | |
| CAAATACAAATCAAGTGGAA+AGG | - | chr8.1:326801-326820 | MS.gene012784:intron | 30.0% | |
| CAGAAGTCAAAAACTATACA+TGG | + | chr8.1:325555-325574 | None:intergenic | 30.0% | |
| CCAACTTCAAAAGATAACAA+AGG | + | chr8.1:324486-324505 | None:intergenic | 30.0% | |
| CCATGTTATTCAAAACTATG+TGG | + | chr8.1:325785-325804 | None:intergenic | 30.0% | |
| CTTATTCTTTCTCATGACTA+TGG | - | chr8.1:325326-325345 | MS.gene012784:intron | 30.0% | |
| GAGTCATTGTCAATTGTATA+GGG | + | chr8.1:326426-326445 | None:intergenic | 30.0% | |
| GATAATGTTACAATGATGAG+TGG | - | chr8.1:326019-326038 | MS.gene012784:intron | 30.0% | |
| GATCGAATGTACAAAATGAT+GGG | - | chr8.1:325804-325823 | MS.gene012784:intron | 30.0% | |
| TGAGTCATTGTCAATTGTAT+AGG | + | chr8.1:326427-326446 | None:intergenic | 30.0% | |
| TGATAGTCCAATCAAGAATT+GGG | - | chr8.1:326462-326481 | MS.gene012784:intron | 30.0% | |
| TGGTTACATAAGATTAGGAA+AGG | - | chr8.1:326039-326058 | MS.gene012784:intron | 30.0% | |
| TGGTTGAAATGGTTATTTAC+AGG | - | chr8.1:326668-326687 | MS.gene012784:intron | 30.0% | |
| TGTCAATTGTATAGGGAAAA+GGG | + | chr8.1:326419-326438 | None:intergenic | 30.0% | |
| TTACATAAGATTAGGAAAGG+TGG | - | chr8.1:326042-326061 | MS.gene012784:intron | 30.0% | |
| TTGTCAATTGTATAGGGAAA+AGG | + | chr8.1:326420-326439 | None:intergenic | 30.0% | |
| TTTCTCTCTTCAATAGACTT+TGG | - | chr8.1:325709-325728 | MS.gene012784:intron | 30.0% | |
| ! | AGCACTGAATTGAAAATAAG+AGG | + | chr8.1:324385-324404 | None:intergenic | 30.0% |
| ! | ATGATTTGCAAACATGGATT+AGG | + | chr8.1:324527-324546 | None:intergenic | 30.0% |
| ! | ATGTATACAAAGAGTGTGTA+TGG | + | chr8.1:324170-324189 | None:intergenic | 30.0% |
| ! | CAAAAGATGATTTGCAAACA+TGG | + | chr8.1:324533-324552 | None:intergenic | 30.0% |
| ! | GCCAAAATTGTAGCATTTTA+AGG | + | chr8.1:324301-324320 | None:intergenic | 30.0% |
| ! | GCCTTAAAATGCTACAATTT+TGG | - | chr8.1:324297-324316 | MS.gene012784:intron | 30.0% |
| ! | TAAGAGCATAGCAGAAAATA+AGG | + | chr8.1:324070-324089 | None:intergenic | 30.0% |
| ! | TTGGATTTGGTAAGAATGAT+AGG | - | chr8.1:324933-324952 | MS.gene012784:intron | 30.0% |
| !! | AAGATGACGGATTAAAATTG+GGG | + | chr8.1:326360-326379 | None:intergenic | 30.0% |
| !! | CAAAGATGACGGATTAAAAT+TGG | + | chr8.1:326362-326381 | None:intergenic | 30.0% |
| !! | GTTGTTTTGTGATAAAAACG+AGG | + | chr8.1:325504-325523 | None:intergenic | 30.0% |
| !!! | CCACATAGTTTTGAATAACA+TGG | - | chr8.1:325782-325801 | MS.gene012784:intron | 30.0% |
| !!! | CCTTTGTTATCTTTTGAAGT+TGG | - | chr8.1:324483-324502 | MS.gene012784:intron | 30.0% |
| !!! | GAAGTTTTTAGCGATTACAA+AGG | - | chr8.1:323840-323859 | MS.gene012784:CDS | 30.0% |
| AAAACTTCTTCAACAGTTCG+AGG | + | chr8.1:323828-323847 | None:intergenic | 35.0% | |
| AATGCTATATGGGACTACAT+AGG | - | chr8.1:325951-325970 | MS.gene012784:intron | 35.0% | |
| ACAACAGATCCAGAATTCAT+CGG | + | chr8.1:327066-327085 | None:intergenic | 35.0% | |
| ACTTTGGTACTATAGCATGT+TGG | - | chr8.1:325725-325744 | MS.gene012784:intron | 35.0% | |
| AGCCATTATAGGTCTATTGT+TGG | - | chr8.1:326302-326321 | MS.gene012784:intron | 35.0% | |
| AGTATCAAGAAGCCAAGAAT+TGG | - | chr8.1:327176-327195 | MS.gene012784:CDS | 35.0% | |
| AGTCTATTGAAGAGAGAAAC+AGG | + | chr8.1:325708-325727 | None:intergenic | 35.0% | |
| ATGCTATATGGGACTACATA+GGG | - | chr8.1:325952-325971 | MS.gene012784:intron | 35.0% | |
| ATGGGTTTCCAAATGAAACA+TGG | - | chr8.1:324747-324766 | MS.gene012784:intron | 35.0% | |
| ATTCTTACCAAATCCAAAGC+GGG | + | chr8.1:324930-324949 | None:intergenic | 35.0% | |
| ATTCTTTCTCATGACTATGG+AGG | - | chr8.1:325329-325348 | MS.gene012784:intron | 35.0% | |
| ATTGGGTATAAACTTTGCTC+GGG | - | chr8.1:324820-324839 | MS.gene012784:intron | 35.0% | |
| CAATATGCATTCTCTTGTTG+AGG | + | chr8.1:326578-326597 | None:intergenic | 35.0% | |
| CATGCTTAAAAAATGTGGCA+TGG | + | chr8.1:324254-324273 | None:intergenic | 35.0% | |
| CATTCTTACCAAATCCAAAG+CGG | + | chr8.1:324931-324950 | None:intergenic | 35.0% | |
| CATTGGGTATAAACTTTGCT+CGG | - | chr8.1:324819-324838 | MS.gene012784:intron | 35.0% | |
| CCACAATCAATAACAACCTA+TGG | - | chr8.1:324324-324343 | MS.gene012784:intron | 35.0% | |
| CTCATTGACAATTGCAGAAA+AGG | - | chr8.1:324709-324728 | MS.gene012784:intron | 35.0% | |
| CTTAGTAGCATGCTCATAAA+TGG | - | chr8.1:325189-325208 | MS.gene012784:intron | 35.0% | |
| CTTTGGTACTATAGCATGTT+GGG | - | chr8.1:325726-325745 | MS.gene012784:intron | 35.0% | |
| GATAGTCCAATCAAGAATTG+GGG | - | chr8.1:326463-326482 | MS.gene012784:intron | 35.0% | |
| GGATCGAATGTACAAAATGA+TGG | - | chr8.1:325803-325822 | MS.gene012784:intron | 35.0% | |
| GTAGTCCCATATAGCATTAT+TGG | + | chr8.1:325949-325968 | None:intergenic | 35.0% | |
| GTCTATTGAAGAGAGAAACA+GGG | + | chr8.1:325707-325726 | None:intergenic | 35.0% | |
| TCCATAACTTTCTCAACAAG+GGG | + | chr8.1:325252-325271 | None:intergenic | 35.0% | |
| TCTACACTCAAAACCACTTA+AGG | + | chr8.1:326078-326097 | None:intergenic | 35.0% | |
| TCTATTGAAGAGAGAAACAG+GGG | + | chr8.1:325706-325725 | None:intergenic | 35.0% | |
| TCTGTGCTTCACAAAATGTT+GGG | - | chr8.1:325353-325372 | MS.gene012784:intron | 35.0% | |
| TGAACTTCTTTGATGCATCT+AGG | - | chr8.1:324969-324988 | MS.gene012784:intron | 35.0% | |
| TGCCAACAATAGACCTATAA+TGG | + | chr8.1:326307-326326 | None:intergenic | 35.0% | |
| TGCTTAAAAAATGTGGCATG+GGG | + | chr8.1:324252-324271 | None:intergenic | 35.0% | |
| TGGGTTTCCAAATGAAACAT+GGG | - | chr8.1:324748-324767 | MS.gene012784:intron | 35.0% | |
| TGTTAAAATTACTCCTGCCA+AGG | - | chr8.1:327118-327137 | MS.gene012784:CDS | 35.0% | |
| TTCACTTCCCATGTTTCATT+TGG | + | chr8.1:324758-324777 | None:intergenic | 35.0% | |
| TTCTGTGCTTCACAAAATGT+TGG | - | chr8.1:325352-325371 | MS.gene012784:intron | 35.0% | |
| TTGAGGCTCCTTAAGAAATA+TGG | + | chr8.1:326561-326580 | None:intergenic | 35.0% | |
| TTTAATTGGATACGGTGAGA+AGG | + | chr8.1:324436-324455 | None:intergenic | 35.0% | |
| TTTCATTTGGAAACCCATAG+AGG | + | chr8.1:324745-324764 | None:intergenic | 35.0% | |
| ! | AGAAGGCAATGAAGGTATAT+TGG | + | chr8.1:324419-324438 | None:intergenic | 35.0% |
| ! | AGGTTGTTATTGATTGTGGA+TGG | + | chr8.1:324323-324342 | None:intergenic | 35.0% |
| ! | ATTTTGTCACACAGAGTACA+GGG | + | chr8.1:325673-325692 | None:intergenic | 35.0% |
| ! | CCATAGGTTGTTATTGATTG+TGG | + | chr8.1:324327-324346 | None:intergenic | 35.0% |
| ! | GAAGAAGATGATGATGAACA+AGG | - | chr8.1:327005-327024 | MS.gene012784:intron | 35.0% |
| !! | TTAAAAGGAAGCATCCAAAC+AGG | + | chr8.1:326901-326920 | None:intergenic | 35.0% |
| AAGGAGAATTTGTGCCTCTA+TGG | - | chr8.1:324728-324747 | MS.gene012784:intron | 40.0% | |
| AATCTGCTTCTTGCAAATGC+AGG | + | chr8.1:326337-326356 | None:intergenic | 40.0% | |
| ACATCTCCCCAATTCTTGAT+TGG | + | chr8.1:326472-326491 | None:intergenic | 40.0% | |
| ACGAGTGAATTCCATATGCA+TGG | + | chr8.1:326873-326892 | None:intergenic | 40.0% | |
| AGAGAAATTGCGGAGAAGAT+GGG | - | chr8.1:325441-325460 | MS.gene012784:intron | 40.0% | |
| AGGAACTGCTAAGCAATCAA+AGG | - | chr8.1:326744-326763 | MS.gene012784:intron | 40.0% | |
| AGGAGAATTTGTGCCTCTAT+GGG | - | chr8.1:324729-324748 | MS.gene012784:intron | 40.0% | |
| AGTTGCAGTTGATCATCCAT+AGG | + | chr8.1:324343-324362 | None:intergenic | 40.0% | |
| ATAGGGAAAAGGGATCCAAT+GGG | + | chr8.1:326409-326428 | None:intergenic | 40.0% | |
| ATCACAGGATCTTTGTAGGA+TGG | - | chr8.1:325846-325865 | MS.gene012784:intron | 40.0% | |
| ATTCTGATGCTCAAGGTAGA+GGG | - | chr8.1:326178-326197 | MS.gene012784:CDS | 40.0% | |
| ATTCTTGCCTCAAGTGCTTT+GGG | - | chr8.1:326109-326128 | MS.gene012784:CDS | 40.0% | |
| CAAAACTATGTGGCCAATGA+TGG | + | chr8.1:325775-325794 | None:intergenic | 40.0% | |
| CAAAATAATTGGCATAGGGC+AGG | - | chr8.1:326507-326526 | MS.gene012784:intron | 40.0% | |
| CAAAGAGAAAAACGACAGAC+CGG | + | chr8.1:324463-324482 | None:intergenic | 40.0% | |
| CCATAACTTTCTCAACAAGG+GGG | + | chr8.1:325251-325270 | None:intergenic | 40.0% | |
| CCGGTGAGTTTAATTGGATA+CGG | + | chr8.1:324444-324463 | None:intergenic | 40.0% | |
| CCGTATCCAATTAAACTCAC+CGG | - | chr8.1:324441-324460 | MS.gene012784:intron | 40.0% | |
| CTGTGCTTCACAAAATGTTG+GGG | - | chr8.1:325354-325373 | MS.gene012784:intron | 40.0% | |
| CTTCTTGCAAATGCAGGATA+AGG | + | chr8.1:326331-326350 | None:intergenic | 40.0% | |
| GAGGAATGGTAGAGAAATTG+CGG | - | chr8.1:325431-325450 | MS.gene012784:intron | 40.0% | |
| GCAAAGTTTATACCCAATGC+TGG | + | chr8.1:324818-324837 | None:intergenic | 40.0% | |
| GCCAGCATGCTTAAAAAATG+TGG | + | chr8.1:324259-324278 | None:intergenic | 40.0% | |
| GGTGCTTGTGGTGATAATTA+TGG | - | chr8.1:327038-327057 | MS.gene012784:intron | 40.0% | |
| GTCAATCACAGGATCTTTGT+AGG | - | chr8.1:325842-325861 | MS.gene012784:intron | 40.0% | |
| GTGAAGAACAGAGAACTAAC+CGG | + | chr8.1:324022-324041 | None:intergenic | 40.0% | |
| GTTGTGATATGTGCGAGAAA+TGG | - | chr8.1:327081-327100 | MS.gene012784:intron | 40.0% | |
| TAGAGAAATTGCGGAGAAGA+TGG | - | chr8.1:325440-325459 | MS.gene012784:intron | 40.0% | |
| TAGCTAAAATCACGGAGGAA+TGG | - | chr8.1:325417-325436 | MS.gene012784:intron | 40.0% | |
| TATAGGGAAAAGGGATCCAA+TGG | + | chr8.1:326410-326429 | None:intergenic | 40.0% | |
| TATGCTACGCTAACCATCAT+TGG | - | chr8.1:325759-325778 | MS.gene012784:intron | 40.0% | |
| TCTGCAAGAGAAAGAGAAGA+AGG | + | chr8.1:323970-323989 | None:intergenic | 40.0% | |
| TGAAGAACAGAGAACTAACC+GGG | + | chr8.1:324021-324040 | None:intergenic | 40.0% | |
| TGATGGTTAGCGTAGCATAA+TGG | + | chr8.1:325758-325777 | None:intergenic | 40.0% | |
| TGCTATATGGGACTACATAG+GGG | - | chr8.1:325953-325972 | MS.gene012784:intron | 40.0% | |
| TTCTATCACTGCCATGCATA+TGG | - | chr8.1:326859-326878 | MS.gene012784:intron | 40.0% | |
| TTGATCAAAGCTCTCACTAC+TGG | - | chr8.1:323876-323895 | MS.gene012784:CDS | 40.0% | |
| TTTCCTATTGGGATAGGCTA+CGG | + | chr8.1:324638-324657 | None:intergenic | 40.0% | |
| ! | AGTGAGAGCTTTGATCAAAC+CGG | + | chr8.1:323874-323893 | None:intergenic | 40.0% |
| ! | ATTAAAAGCGCAGAGACAGA+CGG | + | chr8.1:324044-324063 | None:intergenic | 40.0% |
| ! | GATTTTGTCACACAGAGTAC+AGG | + | chr8.1:325674-325693 | None:intergenic | 40.0% |
| ! | TGGGTTTTTCCTATTGGGAT+AGG | + | chr8.1:324644-324663 | None:intergenic | 40.0% |
| ! | TTCACTCGTGTTTTCCTGTT+TGG | - | chr8.1:326884-326903 | MS.gene012784:intron | 40.0% |
| ! | TTTTGTCACACAGAGTACAG+GGG | + | chr8.1:325672-325691 | None:intergenic | 40.0% |
| !! | ATTATGGCACCGATGAATTC+TGG | - | chr8.1:327054-327073 | MS.gene012784:intron | 40.0% |
| !!! | CTCGCTGTTGCTTTCTATTT+TGG | - | chr8.1:324902-324921 | MS.gene012784:intron | 40.0% |
| !!! | GCCACATTTTTTAAGCATGC+TGG | - | chr8.1:324255-324274 | MS.gene012784:CDS | 40.0% |
| AATCAGACCATCCTCCGATT+GGG | + | chr8.1:326161-326180 | None:intergenic | 45.0% | |
| ACAGTCTTTGAGCTTGCAAC+AGG | - | chr8.1:326724-326743 | MS.gene012784:intron | 45.0% | |
| ATACGGTGAGAAGGCAATGA+AGG | + | chr8.1:324427-324446 | None:intergenic | 45.0% | |
| ATCAACATGGGACGTGACTA+TGG | - | chr8.1:325299-325318 | MS.gene012784:intron | 45.0% | |
| ATCAAGCAATACAAGTGCCC+TGG | - | chr8.1:327149-327168 | MS.gene012784:CDS | 45.0% | |
| ATGTGCGAGAAATGGTTCCA+TGG | - | chr8.1:327089-327108 | MS.gene012784:intron | 45.0% | |
| ATTATCACCACAAGCACCAC+AGG | + | chr8.1:327036-327055 | None:intergenic | 45.0% | |
| CAAAGATCCTGTGATTGACG+TGG | + | chr8.1:325841-325860 | None:intergenic | 45.0% | |
| CAACTGACTGCTCACAACAA+TGG | - | chr8.1:326769-326788 | MS.gene012784:intron | 45.0% | |
| CACTCGGCTCACTTTCTTTA+TGG | + | chr8.1:325989-326008 | None:intergenic | 45.0% | |
| CATTGTTGTGAGCAGTCAGT+TGG | + | chr8.1:326771-326790 | None:intergenic | 45.0% | |
| CCCCCTTGTTGAGAAAGTTA+TGG | - | chr8.1:325248-325267 | MS.gene012784:intron | 45.0% | |
| CTGCTATGCTCTTACTCCTA+GGG | - | chr8.1:324076-324095 | MS.gene012784:intron | 45.0% | |
| CTGTCAACCTCTTCTTTGAC+CGG | + | chr8.1:326972-326991 | None:intergenic | 45.0% | |
| GACAGACCGGTGAGTTTAAT+TGG | + | chr8.1:324450-324469 | None:intergenic | 45.0% | |
| GAGAAATTGCGGAGAAGATG+GGG | - | chr8.1:325442-325461 | MS.gene012784:intron | 45.0% | |
| GATTCTGATGCTCAAGGTAG+AGG | - | chr8.1:326177-326196 | MS.gene012784:CDS | 45.0% | |
| GATTCTTGCCTCAAGTGCTT+TGG | - | chr8.1:326108-326127 | MS.gene012784:CDS | 45.0% | |
| GGTATAAACTTTGCTCGGGA+TGG | - | chr8.1:324824-324843 | MS.gene012784:intron | 45.0% | |
| GTCAAAGAAGAGGTTGACAG+TGG | - | chr8.1:326972-326991 | MS.gene012784:intron | 45.0% | |
| GTTGCAAGCTCAAAGACTGT+GGG | + | chr8.1:326724-326743 | None:intergenic | 45.0% | |
| TAGATGACCACGTCAATCAC+AGG | - | chr8.1:325831-325850 | MS.gene012784:intron | 45.0% | |
| TCAACATGGGACGTGACTAT+GGG | - | chr8.1:325300-325319 | MS.gene012784:intron | 45.0% | |
| TCTGCTATGCTCTTACTCCT+AGG | - | chr8.1:324075-324094 | MS.gene012784:intron | 45.0% | |
| TCTTCAACAGTTCGAGGTAC+TGG | + | chr8.1:323822-323841 | None:intergenic | 45.0% | |
| TGCTTCACAAAATGTTGGGG+TGG | - | chr8.1:325357-325376 | MS.gene012784:intron | 45.0% | |
| TGGTCTGATTCTGATGCTCA+AGG | - | chr8.1:326171-326190 | MS.gene012784:CDS | 45.0% | |
| TGGTTGAGTCTTGCCTTAAG+TGG | - | chr8.1:326062-326081 | MS.gene012784:CDS | 45.0% | |
| TGTGACCTTTGTTGGACATG+CGG | - | chr8.1:325608-325627 | MS.gene012784:intron | 45.0% | |
| TGTTGCAAGCTCAAAGACTG+TGG | + | chr8.1:326725-326744 | None:intergenic | 45.0% | |
| TTCTTGCCTCAAGTGCTTTG+GGG | - | chr8.1:326110-326129 | MS.gene012784:CDS | 45.0% | |
| TTGCAGTTCACAGTGACTCA+TGG | - | chr8.1:324876-324895 | MS.gene012784:intron | 45.0% | |
| TTGCTTGATGTGTTCAGCCT+TGG | + | chr8.1:327138-327157 | None:intergenic | 45.0% | |
| ! | ACAACTTTTCTGCTGCAGTG+CGG | - | chr8.1:324197-324216 | MS.gene012784:CDS | 45.0% |
| ! | AGAACCAAGGTATCCCCAAT+CGG | - | chr8.1:326144-326163 | MS.gene012784:CDS | 45.0% |
| ! | CTTCAACAGTTCGAGGTACT+GGG | + | chr8.1:323821-323840 | None:intergenic | 45.0% |
| ! | GTTTATACCCAATGCTGGCT+CGG | + | chr8.1:324813-324832 | None:intergenic | 45.0% |
| !! | TTTATACCCAATGCTGGCTC+GGG | + | chr8.1:324812-324831 | None:intergenic | 45.0% |
| !!! | TTCTATTTTGGTGCCCGCTT+TGG | - | chr8.1:324914-324933 | MS.gene012784:intron | 45.0% |
| !! | TTATATTATAAATATTTGAA+TGG | - | chr8.1:324577-324596 | MS.gene012784:intron | 5.0% |
| AAAAGGGATCCAATGGGAGG+GGG | + | chr8.1:326403-326422 | None:intergenic | 50.0% | |
| ACAAAGCTCCTGTCATGGCA+GGG | - | chr8.1:326263-326282 | MS.gene012784:intron | 50.0% | |
| ACATCTTCACACCCTTGGTC+TGG | + | chr8.1:326944-326963 | None:intergenic | 50.0% | |
| AGACTGGCGGGACTGTTAAA+AGG | + | chr8.1:326916-326935 | None:intergenic | 50.0% | |
| AGAGAGAAACAGGGGAGAAG+AGG | + | chr8.1:325698-325717 | None:intergenic | 50.0% | |
| ATCAGACCATCCTCCGATTG+GGG | + | chr8.1:326160-326179 | None:intergenic | 50.0% | |
| ATGGAATGCAGGAGAAGGAC+TGG | - | chr8.1:324843-324862 | MS.gene012784:intron | 50.0% | |
| CACAAAATGTTGGGGTGGAG+TGG | - | chr8.1:325362-325381 | MS.gene012784:intron | 50.0% | |
| CACCTCTCTGTGACCTTTGT+TGG | - | chr8.1:325600-325619 | MS.gene012784:intron | 50.0% | |
| CAGTCTGAATCCCAGACCAA+GGG | - | chr8.1:326930-326949 | MS.gene012784:intron | 50.0% | |
| CATCTTCACACCCTTGGTCT+GGG | + | chr8.1:326943-326962 | None:intergenic | 50.0% | |
| GAAAAGGGATCCAATGGGAG+GGG | + | chr8.1:326404-326423 | None:intergenic | 50.0% | |
| GAATCAGACCATCCTCCGAT+TGG | + | chr8.1:326162-326181 | None:intergenic | 50.0% | |
| GATGAACAAGGTGCAACCTG+TGG | - | chr8.1:327017-327036 | MS.gene012784:intron | 50.0% | |
| GCTTCTTGATACTGCAGCCA+GGG | + | chr8.1:327169-327188 | None:intergenic | 50.0% | |
| GGAAAAGGGATCCAATGGGA+GGG | + | chr8.1:326405-326424 | None:intergenic | 50.0% | |
| GGAAGGGTTGGAGCCATTAT+AGG | - | chr8.1:326291-326310 | MS.gene012784:intron | 50.0% | |
| GGAAGTGAACTTGCCTGTTG+AGG | - | chr8.1:324769-324788 | MS.gene012784:intron | 50.0% | |
| GGTTGACAGTGGAGAAGAAG+AGG | - | chr8.1:326983-327002 | MS.gene012784:CDS | 50.0% | |
| GTCCAACAAAGGTCACAGAG+AGG | + | chr8.1:325605-325624 | None:intergenic | 50.0% | |
| GTGCTACAAAGCTCCTGTCA+TGG | - | chr8.1:326258-326277 | MS.gene012784:intron | 50.0% | |
| TACAAAGCTCCTGTCATGGC+AGG | - | chr8.1:326262-326281 | MS.gene012784:intron | 50.0% | |
| TGCAGACATCTTCACACCCT+TGG | + | chr8.1:326949-326968 | None:intergenic | 50.0% | |
| TGCGGGGGTAGCTAAAATCA+CGG | - | chr8.1:325409-325428 | MS.gene012784:intron | 50.0% | |
| TTGATGTGTTCAGCCTTGGC+AGG | + | chr8.1:327134-327153 | None:intergenic | 50.0% | |
| ! | AACTTTTCTGCTGCAGTGCG+GGG | - | chr8.1:324199-324218 | MS.gene012784:CDS | 50.0% |
| ! | CAACTTTTCTGCTGCAGTGC+GGG | - | chr8.1:324198-324217 | MS.gene012784:CDS | 50.0% |
| ! | GACAGGAGCTTTGTAGCACA+AGG | + | chr8.1:326257-326276 | None:intergenic | 50.0% |
| ! | TTTTACCAGCTCTGCGATCC+CGG | - | chr8.1:324000-324019 | MS.gene012784:CDS | 50.0% |
| !! | CTCAAGTGCTTTGGGGATGT+GGG | - | chr8.1:326117-326136 | MS.gene012784:CDS | 50.0% |
| !! | GGAGAAGGACTGGTTATCAC+TGG | - | chr8.1:324853-324872 | MS.gene012784:intron | 50.0% |
| !! | TCAAGTGCTTTGGGGATGTG+GGG | - | chr8.1:326118-326137 | MS.gene012784:CDS | 50.0% |
| !! | TTTGGTGCCCGCTTTGGATT+TGG | - | chr8.1:324920-324939 | MS.gene012784:intron | 50.0% |
| AAGGCGGCAGAAAACAGCAC+AGG | + | chr8.1:324282-324301 | None:intergenic | 55.0% | |
| AGGCGGCAGAAAACAGCACA+GGG | + | chr8.1:324281-324300 | None:intergenic | 55.0% | |
| AGGTATCCCCAATCGGAGGA+TGG | - | chr8.1:326151-326170 | MS.gene012784:CDS | 55.0% | |
| CACAGAGTACAGGGGAGAGA+AGG | + | chr8.1:325664-325683 | None:intergenic | 55.0% | |
| CCAGTCTGAATCCCAGACCA+AGG | - | chr8.1:326929-326948 | MS.gene012784:intron | 55.0% | |
| CCTATTGGGATAGGCTACGG+AGG | + | chr8.1:324635-324654 | None:intergenic | 55.0% | |
| CCTCCGTAGCCTATCCCAAT+AGG | - | chr8.1:324632-324651 | MS.gene012784:intron | 55.0% | |
| CTTTGCTCGGGATGGAATGC+AGG | - | chr8.1:324832-324851 | MS.gene012784:intron | 55.0% | |
| CTTTGTTGGACATGCGGCTC+CGG | - | chr8.1:325614-325633 | MS.gene012784:intron | 55.0% | |
| GAACTTCCCGAGCCAGCATT+GGG | - | chr8.1:324803-324822 | MS.gene012784:intron | 55.0% | |
| GAGATCGTGGAAGCGAAGAG+CGG | + | chr8.1:325581-325600 | None:intergenic | 55.0% | |
| GATTACAAAGGCAGACGCGC+CGG | - | chr8.1:323852-323871 | MS.gene012784:CDS | 55.0% | |
| GGATGTGGGGAGAAGAACCA+AGG | - | chr8.1:326131-326150 | MS.gene012784:CDS | 55.0% | |
| GGCTTCTTGATACTGCAGCC+AGG | + | chr8.1:327170-327189 | None:intergenic | 55.0% | |
| GGGAAAAGGGATCCAATGGG+AGG | + | chr8.1:326406-326425 | None:intergenic | 55.0% | |
| GGGGGTAGCTAAAATCACGG+AGG | - | chr8.1:325412-325431 | MS.gene012784:intron | 55.0% | |
| GGGTGTGAAGATGTCTGCAC+CGG | - | chr8.1:326950-326969 | MS.gene012784:intron | 55.0% | |
| GTCACAGAGAGGTGAGATCG+TGG | + | chr8.1:325594-325613 | None:intergenic | 55.0% | |
| TAATGGCTCCAACCCTTCCC+TGG | + | chr8.1:326290-326309 | None:intergenic | 55.0% | |
| TCCTCCGATTGGGGATACCT+TGG | + | chr8.1:326151-326170 | None:intergenic | 55.0% | |
| TCGGGATGGAATGCAGGAGA+AGG | - | chr8.1:324838-324857 | MS.gene012784:intron | 55.0% | |
| TGAACTTCCCGAGCCAGCAT+TGG | - | chr8.1:324802-324821 | MS.gene012784:intron | 55.0% | |
| ! | ACCAAGGTATCCCCAATCGG+AGG | - | chr8.1:326147-326166 | MS.gene012784:CDS | 55.0% |
| ! | CCACATCCCCAAAGCACTTG+AGG | + | chr8.1:326119-326138 | None:intergenic | 55.0% |
| ! | CCTTGGTCTGGGATTCAGAC+TGG | + | chr8.1:326932-326951 | None:intergenic | 55.0% |
| ! | GTCTGCACCGGTCAAAGAAG+AGG | - | chr8.1:326962-326981 | MS.gene012784:intron | 55.0% |
| ! | TGGTCTGGGATTCAGACTGG+CGG | + | chr8.1:326929-326948 | None:intergenic | 55.0% |
| !! | AATGCTGGCTCGGGAAGTTC+AGG | + | chr8.1:324803-324822 | None:intergenic | 55.0% |
| !! | CCTCAAGTGCTTTGGGGATG+TGG | - | chr8.1:326116-326135 | MS.gene012784:CDS | 55.0% |
| !! | TCAGGAGGCACTTCCTCAAC+AGG | + | chr8.1:324785-324804 | None:intergenic | 55.0% |
| ACTAACCGGGATCGCAGAGC+TGG | + | chr8.1:324008-324027 | None:intergenic | 60.0% | |
| CGGAGCCGCATGTCCAACAA+AGG | + | chr8.1:325616-325635 | None:intergenic | 60.0% | |
| CTGCAGTGCGGGGTGAATTG+GGG | - | chr8.1:324209-324228 | MS.gene012784:CDS | 60.0% | |
| CTTGAGTCACCCCCTCCCAT+TGG | - | chr8.1:326391-326410 | MS.gene012784:intron | 60.0% | |
| GCTGCAGTGCGGGGTGAATT+GGG | - | chr8.1:324208-324227 | MS.gene012784:CDS | 60.0% | |
| GGTGCAACCTGTGGTGCTTG+TGG | - | chr8.1:327026-327045 | MS.gene012784:intron | 60.0% | |
| GGTGGAGTGGATCTGCGTTG+CGG | - | chr8.1:325375-325394 | MS.gene012784:intron | 60.0% | |
| GTTGCGGCCATAGTGCTGTG+CGG | - | chr8.1:325391-325410 | MS.gene012784:intron | 60.0% | |
| TACAGGGGAGAGAAGGTCGC+CGG | + | chr8.1:325657-325676 | None:intergenic | 60.0% | |
| TCATGGCAGGGTCCAGGGAA+GGG | - | chr8.1:326275-326294 | MS.gene012784:intron | 60.0% | |
| TCCTGTCATGGCAGGGTCCA+GGG | - | chr8.1:326270-326289 | MS.gene012784:intron | 60.0% | |
| TGCTGCAGTGCGGGGTGAAT+TGG | - | chr8.1:324207-324226 | MS.gene012784:CDS | 60.0% | |
| TTGCGGCCATAGTGCTGTGC+GGG | - | chr8.1:325392-325411 | MS.gene012784:intron | 60.0% | |
| ! | GGTCTGGGATTCAGACTGGC+GGG | + | chr8.1:326928-326947 | None:intergenic | 60.0% |
| CTCCTGTCATGGCAGGGTCC+AGG | - | chr8.1:326269-326288 | MS.gene012784:intron | 65.0% | |
| GCTACCCCCGCACAGCACTA+TGG | + | chr8.1:325401-325420 | None:intergenic | 65.0% | |
| GTCATGGCAGGGTCCAGGGA+AGG | - | chr8.1:326274-326293 | MS.gene012784:intron | 65.0% | |
| TCCCTGGACCCTGCCATGAC+AGG | + | chr8.1:326274-326293 | None:intergenic | 65.0% | |
| TGCGGCCATAGTGCTGTGCG+GGG | - | chr8.1:325393-325412 | MS.gene012784:intron | 65.0% | |
| !! | GCTGGCTCGGGAAGTTCAGG+AGG | + | chr8.1:324800-324819 | None:intergenic | 65.0% |
| GCGGCCATAGTGCTGTGCGG+GGG | - | chr8.1:325394-325413 | MS.gene012784:intron | 70.0% | |
| GGCAGGGTCCAGGGAAGGGT+TGG | - | chr8.1:326279-326298 | MS.gene012784:intron | 70.0% | |
| TTGGACATGCGGCTCCGGCG+CGG | - | chr8.1:325619-325638 | MS.gene012784:intron | 70.0% | |
| GGAGTCAGCACCAGCCGCGC+CGG | + | chr8.1:325636-325655 | None:intergenic | 75.0% | |
| !! | GGCGCGGCTGGTGCTGACTC+CGG | - | chr8.1:325635-325654 | MS.gene012784:intron | 75.0% |
| ! | ACATGCGGCTCCGGCGCGGC+TGG | - | chr8.1:325623-325642 | MS.gene012784:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 323798 | 327202 | 323798 | ID=MS.gene012784 |
| chr8.1 | mRNA | 323798 | 327202 | 323798 | ID=MS.gene012784.t1;Parent=MS.gene012784 |
| chr8.1 | exon | 327103 | 327202 | 327103 | ID=MS.gene012784.t1.exon1;Parent=MS.gene012784.t1 |
| chr8.1 | CDS | 327103 | 327202 | 327103 | ID=cds.MS.gene012784.t1;Parent=MS.gene012784.t1 |
| chr8.1 | exon | 326979 | 327011 | 326979 | ID=MS.gene012784.t1.exon2;Parent=MS.gene012784.t1 |
| chr8.1 | CDS | 326979 | 327011 | 326979 | ID=cds.MS.gene012784.t1;Parent=MS.gene012784.t1 |
| chr8.1 | exon | 326046 | 326274 | 326046 | ID=MS.gene012784.t1.exon3;Parent=MS.gene012784.t1 |
| chr8.1 | CDS | 326046 | 326274 | 326046 | ID=cds.MS.gene012784.t1;Parent=MS.gene012784.t1 |
| chr8.1 | exon | 324178 | 324310 | 324178 | ID=MS.gene012784.t1.exon4;Parent=MS.gene012784.t1 |
| chr8.1 | CDS | 324178 | 324310 | 324178 | ID=cds.MS.gene012784.t1;Parent=MS.gene012784.t1 |
| chr8.1 | exon | 323798 | 324076 | 323798 | ID=MS.gene012784.t1.exon5;Parent=MS.gene012784.t1 |
| chr8.1 | CDS | 323798 | 324076 | 323798 | ID=cds.MS.gene012784.t1;Parent=MS.gene012784.t1 |
| Gene Sequence |
| Protein sequence |
