Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012917.t1 | KEH35769.1 | 96.2 | 318 | 12 | 0 | 1 | 318 | 1 | 318 | 8.20E-170 | 606.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012917.t1 | Q9LM46 | 43.3 | 231 | 108 | 3 | 1 | 209 | 1 | 230 | 1.6e-41 | 171.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012917.t1 | G7ZXM5 | 96.2 | 318 | 12 | 0 | 1 | 318 | 1 | 318 | 5.9e-170 | 606.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene012917.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012917.t1 | MTR_3g102570 | 96.226 | 318 | 12 | 0 | 1 | 318 | 1 | 318 | 0.0 | 639 |
| MS.gene012917.t1 | MTR_4g084740 | 36.860 | 293 | 144 | 9 | 1 | 274 | 1 | 271 | 1.87e-47 | 162 |
| MS.gene012917.t1 | MTR_5g061740 | 33.779 | 299 | 142 | 11 | 1 | 280 | 1 | 262 | 1.54e-36 | 134 |
| MS.gene012917.t1 | MTR_4g108720 | 29.528 | 254 | 145 | 7 | 1 | 230 | 1 | 244 | 1.81e-28 | 113 |
| MS.gene012917.t1 | MTR_5g041650 | 35.912 | 181 | 101 | 6 | 1 | 174 | 38 | 210 | 6.29e-27 | 109 |
| MS.gene012917.t1 | MTR_7g075870 | 62.857 | 70 | 26 | 0 | 1 | 70 | 1 | 70 | 2.48e-23 | 95.9 |
| MS.gene012917.t1 | MTR_1g053070 | 39.444 | 180 | 77 | 6 | 1 | 168 | 1 | 160 | 7.86e-23 | 95.5 |
| MS.gene012917.t1 | MTR_3g452380 | 62.857 | 70 | 25 | 1 | 1 | 70 | 16 | 84 | 7.89e-23 | 95.5 |
| MS.gene012917.t1 | MTR_3g005530 | 64.286 | 70 | 24 | 1 | 1 | 70 | 1 | 69 | 1.10e-22 | 94.4 |
| MS.gene012917.t1 | MTR_8g033220 | 65.714 | 70 | 23 | 1 | 1 | 70 | 1 | 69 | 1.86e-22 | 94.0 |
| MS.gene012917.t1 | MTR_2g017865 | 62.857 | 70 | 25 | 1 | 1 | 70 | 16 | 84 | 1.92e-22 | 94.7 |
| MS.gene012917.t1 | MTR_8g033220 | 65.714 | 70 | 23 | 1 | 1 | 70 | 1 | 69 | 2.24e-22 | 94.0 |
| MS.gene012917.t1 | MTR_5g046870 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 3.57e-22 | 90.1 |
| MS.gene012917.t1 | MTR_8g087860 | 62.857 | 70 | 25 | 1 | 1 | 70 | 17 | 85 | 3.64e-22 | 93.6 |
| MS.gene012917.t1 | MTR_5g032520 | 68.571 | 70 | 21 | 1 | 1 | 70 | 1 | 69 | 6.48e-22 | 92.4 |
| MS.gene012917.t1 | MTR_5g032150 | 68.571 | 70 | 21 | 1 | 1 | 70 | 1 | 69 | 8.71e-22 | 92.0 |
| MS.gene012917.t1 | MTR_7g075850 | 33.163 | 196 | 97 | 7 | 1 | 181 | 1 | 177 | 1.03e-21 | 92.4 |
| MS.gene012917.t1 | MTR_7g075870 | 61.429 | 70 | 26 | 1 | 1 | 70 | 1 | 69 | 1.42e-21 | 91.3 |
| MS.gene012917.t1 | MTR_8g066260 | 55.128 | 78 | 35 | 0 | 1 | 78 | 1 | 78 | 1.55e-21 | 91.7 |
| MS.gene012917.t1 | MTR_4g109830 | 36.686 | 169 | 81 | 3 | 1 | 169 | 1 | 143 | 1.83e-21 | 91.3 |
| MS.gene012917.t1 | MTR_8g097090 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 2.30e-21 | 91.3 |
| MS.gene012917.t1 | MTR_4g102530 | 53.261 | 92 | 38 | 2 | 1 | 88 | 1 | 91 | 3.40e-21 | 90.1 |
| MS.gene012917.t1 | MTR_3g084980 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 4.95e-21 | 90.5 |
| MS.gene012917.t1 | MTR_5g046790 | 55.128 | 78 | 35 | 0 | 1 | 78 | 1 | 78 | 5.20e-21 | 89.7 |
| MS.gene012917.t1 | MTR_6g015975 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 1.28e-20 | 89.4 |
| MS.gene012917.t1 | MTR_7g016600 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 1.39e-20 | 89.4 |
| MS.gene012917.t1 | MTR_2g009890 | 35.465 | 172 | 83 | 3 | 1 | 172 | 1 | 144 | 1.53e-20 | 89.7 |
| MS.gene012917.t1 | MTR_4g109810 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 1.80e-20 | 89.0 |
| MS.gene012917.t1 | MTR_7g016630 | 36.686 | 169 | 79 | 4 | 1 | 169 | 1 | 141 | 2.48e-20 | 89.0 |
| MS.gene012917.t1 | MTR_8g033270 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 6.16e-20 | 87.8 |
| MS.gene012917.t1 | MTR_5g031000 | 55.714 | 70 | 30 | 1 | 1 | 70 | 1 | 69 | 1.56e-19 | 85.9 |
| MS.gene012917.t1 | MTR_5g031000 | 55.714 | 70 | 30 | 1 | 1 | 70 | 1 | 69 | 1.75e-19 | 86.3 |
| MS.gene012917.t1 | MTR_1g038300 | 56.338 | 71 | 30 | 1 | 1 | 70 | 1 | 71 | 1.78e-19 | 85.9 |
| MS.gene012917.t1 | MTR_3g113030 | 42.400 | 125 | 62 | 4 | 1 | 118 | 1 | 122 | 3.41e-19 | 85.1 |
| MS.gene012917.t1 | MTR_6g464720 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 3.44e-19 | 85.5 |
| MS.gene012917.t1 | MTR_1g108510 | 45.098 | 102 | 53 | 3 | 2 | 101 | 9 | 109 | 3.86e-19 | 85.1 |
| MS.gene012917.t1 | MTR_2g461710 | 61.667 | 60 | 23 | 0 | 1 | 60 | 1 | 60 | 8.90e-19 | 79.3 |
| MS.gene012917.t1 | MTR_3g030770 | 45.098 | 102 | 53 | 3 | 2 | 101 | 9 | 109 | 9.84e-19 | 84.0 |
| MS.gene012917.t1 | MTR_3g088615 | 54.930 | 71 | 31 | 1 | 1 | 70 | 1 | 71 | 1.77e-18 | 82.0 |
| MS.gene012917.t1 | MTR_1g108580 | 45.098 | 102 | 53 | 3 | 2 | 101 | 9 | 109 | 1.85e-18 | 83.2 |
| MS.gene012917.t1 | MTR_5g066960 | 57.377 | 61 | 26 | 0 | 1 | 61 | 1 | 61 | 2.26e-18 | 78.2 |
| MS.gene012917.t1 | MTR_0003s0590 | 52.632 | 76 | 35 | 1 | 1 | 76 | 1 | 75 | 3.78e-18 | 82.8 |
| MS.gene012917.t1 | MTR_8g086290 | 54.930 | 71 | 31 | 1 | 2 | 72 | 12 | 81 | 4.83e-18 | 80.5 |
| MS.gene012917.t1 | MTR_4g093030 | 55.224 | 67 | 30 | 0 | 1 | 67 | 1 | 67 | 6.40e-18 | 79.7 |
| MS.gene012917.t1 | MTR_5g066180 | 52.857 | 70 | 32 | 1 | 1 | 70 | 1 | 69 | 1.09e-17 | 80.9 |
| MS.gene012917.t1 | MTR_5g021270 | 50.515 | 97 | 45 | 3 | 1 | 95 | 1 | 96 | 1.31e-17 | 80.9 |
| MS.gene012917.t1 | MTR_5g021270 | 50.515 | 97 | 45 | 3 | 1 | 95 | 1 | 96 | 1.39e-17 | 80.9 |
| MS.gene012917.t1 | MTR_1g105910 | 43.269 | 104 | 56 | 3 | 2 | 103 | 9 | 111 | 2.21e-17 | 80.1 |
| MS.gene012917.t1 | MTR_4g036050 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 2.77e-17 | 78.6 |
| MS.gene012917.t1 | MTR_4g093970 | 35.036 | 137 | 77 | 4 | 1 | 126 | 27 | 162 | 2.87e-17 | 80.1 |
| MS.gene012917.t1 | MTR_4g036050 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 3.15e-17 | 78.6 |
| MS.gene012917.t1 | MTR_4g036050 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 3.55e-17 | 78.6 |
| MS.gene012917.t1 | MTR_8g043650 | 31.176 | 170 | 95 | 5 | 2 | 165 | 9 | 162 | 3.63e-17 | 79.7 |
| MS.gene012917.t1 | MTR_4g036050 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 4.14e-17 | 78.6 |
| MS.gene012917.t1 | MTR_1g101970 | 54.286 | 70 | 31 | 1 | 1 | 70 | 1 | 69 | 4.26e-17 | 78.6 |
| MS.gene012917.t1 | MTR_3g052920 | 44.231 | 104 | 55 | 3 | 2 | 103 | 9 | 111 | 4.43e-17 | 79.3 |
| MS.gene012917.t1 | MTR_3g052870 | 42.308 | 104 | 57 | 3 | 2 | 103 | 9 | 111 | 4.64e-17 | 79.0 |
| MS.gene012917.t1 | MTR_1g029670 | 41.176 | 102 | 58 | 2 | 1 | 101 | 1 | 101 | 7.20e-17 | 77.4 |
| MS.gene012917.t1 | MTR_2g105290 | 36.806 | 144 | 67 | 5 | 1 | 141 | 11 | 133 | 1.02e-16 | 77.0 |
| MS.gene012917.t1 | MTR_1g105920 | 42.157 | 102 | 56 | 3 | 2 | 101 | 9 | 109 | 1.44e-16 | 78.2 |
| MS.gene012917.t1 | MTR_2g030740 | 36.567 | 134 | 66 | 5 | 2 | 133 | 9 | 125 | 1.52e-16 | 77.8 |
| MS.gene012917.t1 | MTR_6g018920 | 28.662 | 157 | 96 | 4 | 1 | 141 | 1 | 157 | 4.88e-16 | 78.2 |
| MS.gene012917.t1 | MTR_2g085280 | 45.556 | 90 | 47 | 2 | 2 | 90 | 9 | 97 | 5.60e-16 | 76.3 |
| MS.gene012917.t1 | MTR_2g093190 | 40.196 | 102 | 58 | 2 | 2 | 101 | 9 | 109 | 6.19e-16 | 75.9 |
| MS.gene012917.t1 | MTR_2g085250 | 45.556 | 90 | 47 | 2 | 2 | 90 | 9 | 97 | 6.24e-16 | 76.3 |
| MS.gene012917.t1 | MTR_4g094632 | 33.858 | 127 | 75 | 3 | 1 | 119 | 1 | 126 | 7.00e-16 | 74.3 |
| MS.gene012917.t1 | MTR_1g106070 | 37.008 | 127 | 72 | 4 | 2 | 126 | 9 | 129 | 7.79e-16 | 74.7 |
| MS.gene012917.t1 | MTR_1g012570 | 42.308 | 104 | 57 | 3 | 2 | 103 | 9 | 111 | 1.17e-15 | 75.5 |
| MS.gene012917.t1 | MTR_5g045560 | 49.315 | 73 | 36 | 1 | 1 | 73 | 8 | 79 | 1.24e-15 | 75.5 |
| MS.gene012917.t1 | MTR_1g077360 | 43.810 | 105 | 56 | 3 | 2 | 104 | 9 | 112 | 1.69e-15 | 75.1 |
| MS.gene012917.t1 | MTR_0121s0100 | 42.718 | 103 | 54 | 4 | 2 | 101 | 9 | 109 | 1.74e-15 | 72.4 |
| MS.gene012917.t1 | MTR_1g075600 | 41.905 | 105 | 58 | 2 | 2 | 104 | 9 | 112 | 2.90e-15 | 74.3 |
| MS.gene012917.t1 | MTR_1g041615 | 50.000 | 68 | 31 | 1 | 13 | 77 | 17 | 84 | 4.87e-15 | 71.2 |
| MS.gene012917.t1 | MTR_3g080940 | 38.835 | 103 | 60 | 2 | 1 | 101 | 8 | 109 | 6.61e-15 | 72.8 |
| MS.gene012917.t1 | MTR_1g114730 | 34.862 | 109 | 63 | 3 | 1 | 101 | 1 | 109 | 8.74e-15 | 74.3 |
| MS.gene012917.t1 | MTR_1g054265 | 45.205 | 73 | 39 | 1 | 1 | 73 | 1 | 72 | 1.15e-14 | 71.2 |
| MS.gene012917.t1 | MTR_4g131030 | 37.302 | 126 | 69 | 4 | 1 | 121 | 1 | 121 | 1.56e-14 | 72.0 |
| MS.gene012917.t1 | MTR_8g079502 | 45.070 | 71 | 38 | 1 | 1 | 71 | 1 | 70 | 2.37e-14 | 70.5 |
| MS.gene012917.t1 | MTR_3g030780 | 48.571 | 70 | 35 | 1 | 2 | 71 | 9 | 77 | 2.93e-14 | 68.9 |
| MS.gene012917.t1 | MTR_7g028448 | 58.621 | 58 | 23 | 1 | 15 | 72 | 25 | 81 | 3.52e-14 | 69.7 |
| MS.gene012917.t1 | MTR_4g036915 | 58.621 | 58 | 23 | 1 | 15 | 72 | 25 | 81 | 3.52e-14 | 69.7 |
| MS.gene012917.t1 | MTR_4g094638 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 3.64e-14 | 70.1 |
| MS.gene012917.t1 | MTR_8g051580 | 32.667 | 150 | 80 | 6 | 1 | 139 | 1 | 140 | 3.67e-14 | 70.1 |
| MS.gene012917.t1 | MTR_1g047550 | 45.070 | 71 | 38 | 1 | 1 | 71 | 1 | 70 | 7.57e-14 | 68.9 |
| MS.gene012917.t1 | MTR_0121s0080 | 42.718 | 103 | 54 | 4 | 2 | 101 | 9 | 109 | 1.17e-13 | 69.7 |
| MS.gene012917.t1 | MTR_5g053390 | 47.887 | 71 | 36 | 1 | 2 | 72 | 9 | 78 | 1.46e-13 | 69.3 |
| MS.gene012917.t1 | MTR_5g055100 | 47.887 | 71 | 36 | 1 | 2 | 72 | 9 | 78 | 1.73e-13 | 69.3 |
| MS.gene012917.t1 | MTR_1g105905 | 40.000 | 95 | 54 | 3 | 11 | 103 | 1 | 94 | 2.20e-13 | 68.6 |
| MS.gene012917.t1 | MTR_1g063160 | 36.905 | 84 | 52 | 1 | 1 | 84 | 1 | 83 | 3.64e-13 | 67.4 |
| MS.gene012917.t1 | MTR_6g005440 | 32.110 | 109 | 66 | 3 | 1 | 101 | 1 | 109 | 3.20e-12 | 66.6 |
| MS.gene012917.t1 | MTR_8g046350 | 42.254 | 71 | 40 | 1 | 1 | 71 | 1 | 70 | 3.77e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012917.t1 | AT1G22130 | 43.290 | 231 | 108 | 3 | 1 | 209 | 1 | 230 | 1.97e-52 | 176 |
| MS.gene012917.t1 | AT1G77980 | 41.631 | 233 | 112 | 2 | 1 | 209 | 1 | 233 | 1.02e-51 | 174 |
| MS.gene012917.t1 | AT1G77950 | 42.308 | 234 | 110 | 5 | 1 | 212 | 1 | 231 | 2.19e-48 | 162 |
| MS.gene012917.t1 | AT1G77950 | 42.308 | 234 | 110 | 5 | 1 | 212 | 1 | 231 | 2.19e-48 | 162 |
| MS.gene012917.t1 | AT1G77950 | 42.308 | 234 | 110 | 5 | 1 | 212 | 1 | 231 | 2.19e-48 | 162 |
| MS.gene012917.t1 | AT1G77950 | 42.308 | 234 | 110 | 5 | 1 | 212 | 1 | 231 | 2.19e-48 | 162 |
| MS.gene012917.t1 | AT1G18750 | 30.544 | 239 | 128 | 6 | 1 | 211 | 1 | 229 | 1.00e-28 | 114 |
| MS.gene012917.t1 | AT4G37435 | 36.979 | 192 | 106 | 4 | 1 | 187 | 1 | 182 | 1.21e-28 | 109 |
| MS.gene012917.t1 | AT1G18750 | 30.544 | 239 | 128 | 6 | 1 | 211 | 1 | 229 | 1.32e-28 | 114 |
| MS.gene012917.t1 | AT1G69540 | 35.593 | 177 | 103 | 4 | 1 | 172 | 1 | 171 | 3.41e-27 | 109 |
| MS.gene012917.t1 | AT1G69540 | 35.593 | 177 | 103 | 4 | 1 | 172 | 1 | 171 | 4.76e-27 | 109 |
| MS.gene012917.t1 | AT1G18750 | 49.020 | 102 | 49 | 2 | 1 | 99 | 1 | 102 | 4.31e-26 | 107 |
| MS.gene012917.t1 | AT2G03060 | 33.898 | 177 | 106 | 5 | 1 | 172 | 1 | 171 | 6.61e-26 | 106 |
| MS.gene012917.t1 | AT2G03060 | 33.898 | 177 | 106 | 5 | 1 | 172 | 1 | 171 | 6.87e-26 | 106 |
| MS.gene012917.t1 | AT2G03060 | 33.898 | 177 | 106 | 5 | 1 | 172 | 1 | 171 | 6.87e-26 | 106 |
| MS.gene012917.t1 | AT2G03060 | 33.898 | 177 | 106 | 5 | 1 | 172 | 1 | 171 | 6.87e-26 | 106 |
| MS.gene012917.t1 | AT4G09960 | 64.286 | 70 | 24 | 1 | 1 | 70 | 1 | 69 | 5.70e-23 | 95.1 |
| MS.gene012917.t1 | AT4G09960 | 64.286 | 70 | 24 | 1 | 1 | 70 | 1 | 69 | 7.02e-23 | 95.1 |
| MS.gene012917.t1 | AT3G54340 | 35.242 | 227 | 119 | 8 | 1 | 213 | 1 | 213 | 7.70e-23 | 95.1 |
| MS.gene012917.t1 | AT4G09960 | 64.286 | 70 | 24 | 1 | 1 | 70 | 2 | 70 | 7.78e-23 | 95.1 |
| MS.gene012917.t1 | AT3G58780 | 34.302 | 172 | 111 | 1 | 1 | 172 | 16 | 185 | 9.13e-23 | 95.9 |
| MS.gene012917.t1 | AT4G11880 | 62.857 | 70 | 26 | 0 | 1 | 70 | 1 | 70 | 9.31e-23 | 93.6 |
| MS.gene012917.t1 | AT4G11880 | 62.857 | 70 | 26 | 0 | 1 | 70 | 1 | 70 | 9.31e-23 | 93.6 |
| MS.gene012917.t1 | AT4G09960 | 64.286 | 70 | 24 | 1 | 1 | 70 | 11 | 79 | 1.14e-22 | 94.7 |
| MS.gene012917.t1 | AT4G09960 | 64.286 | 70 | 24 | 1 | 1 | 70 | 27 | 95 | 1.60e-22 | 94.7 |
| MS.gene012917.t1 | AT4G11880 | 62.857 | 70 | 26 | 0 | 1 | 70 | 1 | 70 | 2.31e-22 | 93.6 |
| MS.gene012917.t1 | AT4G11880 | 62.857 | 70 | 26 | 0 | 1 | 70 | 1 | 70 | 2.31e-22 | 93.6 |
| MS.gene012917.t1 | AT4G18960 | 65.217 | 69 | 23 | 1 | 2 | 70 | 18 | 85 | 2.90e-22 | 94.0 |
| MS.gene012917.t1 | AT5G62165 | 38.150 | 173 | 78 | 4 | 1 | 172 | 1 | 145 | 3.05e-22 | 91.3 |
| MS.gene012917.t1 | AT5G62165 | 38.150 | 173 | 78 | 4 | 1 | 172 | 1 | 145 | 3.05e-22 | 91.3 |
| MS.gene012917.t1 | AT5G62165 | 38.150 | 173 | 78 | 4 | 1 | 172 | 1 | 145 | 3.05e-22 | 91.3 |
| MS.gene012917.t1 | AT5G62165 | 38.150 | 173 | 78 | 4 | 1 | 172 | 1 | 145 | 3.05e-22 | 91.3 |
| MS.gene012917.t1 | AT5G62165 | 38.150 | 173 | 78 | 4 | 1 | 172 | 1 | 145 | 3.05e-22 | 91.3 |
| MS.gene012917.t1 | AT1G69120 | 35.465 | 172 | 85 | 2 | 1 | 172 | 1 | 146 | 4.20e-22 | 93.2 |
| MS.gene012917.t1 | AT4G09960 | 64.286 | 70 | 24 | 1 | 1 | 70 | 96 | 164 | 5.28e-22 | 94.7 |
| MS.gene012917.t1 | AT3G58780 | 35.260 | 173 | 85 | 3 | 1 | 173 | 16 | 161 | 5.67e-22 | 94.0 |
| MS.gene012917.t1 | AT2G42830 | 36.095 | 169 | 81 | 3 | 1 | 169 | 16 | 157 | 6.14e-22 | 93.2 |
| MS.gene012917.t1 | AT2G42830 | 36.095 | 169 | 81 | 3 | 1 | 169 | 16 | 157 | 6.92e-22 | 92.8 |
| MS.gene012917.t1 | AT3G58780 | 61.429 | 70 | 26 | 1 | 1 | 70 | 16 | 84 | 7.74e-22 | 92.8 |
| MS.gene012917.t1 | AT3G58780 | 61.429 | 70 | 26 | 1 | 1 | 70 | 22 | 90 | 8.15e-22 | 92.8 |
| MS.gene012917.t1 | AT5G62165 | 42.336 | 137 | 62 | 4 | 1 | 132 | 1 | 125 | 9.41e-22 | 90.1 |
| MS.gene012917.t1 | AT5G62165 | 42.336 | 137 | 62 | 4 | 1 | 132 | 1 | 125 | 9.41e-22 | 90.1 |
| MS.gene012917.t1 | AT5G62165 | 42.336 | 137 | 62 | 4 | 1 | 132 | 1 | 125 | 9.41e-22 | 90.1 |
| MS.gene012917.t1 | AT3G57390 | 64.286 | 70 | 24 | 1 | 1 | 70 | 1 | 69 | 1.01e-21 | 92.0 |
| MS.gene012917.t1 | AT3G57230 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 1.11e-21 | 89.7 |
| MS.gene012917.t1 | AT1G69120 | 35.465 | 172 | 85 | 2 | 1 | 172 | 1 | 146 | 1.12e-21 | 92.4 |
| MS.gene012917.t1 | AT5G60910 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 1.42e-21 | 92.0 |
| MS.gene012917.t1 | AT3G57390 | 64.286 | 70 | 24 | 1 | 1 | 70 | 1 | 69 | 1.74e-21 | 92.0 |
| MS.gene012917.t1 | AT5G62165 | 61.429 | 70 | 26 | 1 | 1 | 70 | 1 | 69 | 2.35e-21 | 87.4 |
| MS.gene012917.t1 | AT3G30260 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 2.43e-21 | 91.7 |
| MS.gene012917.t1 | AT2G45650 | 62.857 | 70 | 25 | 1 | 1 | 70 | 1 | 69 | 2.57e-21 | 91.7 |
| MS.gene012917.t1 | AT5G51870 | 46.602 | 103 | 52 | 2 | 1 | 103 | 1 | 100 | 2.78e-21 | 89.4 |
| MS.gene012917.t1 | AT2G45660 | 57.746 | 71 | 29 | 1 | 1 | 71 | 1 | 70 | 3.13e-21 | 89.0 |
| MS.gene012917.t1 | AT3G58780 | 65.574 | 61 | 21 | 0 | 1 | 61 | 16 | 76 | 3.51e-21 | 90.9 |
| MS.gene012917.t1 | AT1G26310 | 35.465 | 172 | 87 | 2 | 1 | 172 | 1 | 148 | 3.61e-21 | 91.3 |
| MS.gene012917.t1 | AT5G10140 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 4.65e-21 | 88.6 |
| MS.gene012917.t1 | AT3G57230 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 4.81e-21 | 90.5 |
| MS.gene012917.t1 | AT3G57230 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 4.81e-21 | 90.5 |
| MS.gene012917.t1 | AT5G62165 | 42.336 | 137 | 62 | 4 | 1 | 132 | 1 | 125 | 5.22e-21 | 89.4 |
| MS.gene012917.t1 | AT5G62165 | 42.336 | 137 | 62 | 4 | 1 | 132 | 1 | 125 | 5.22e-21 | 89.4 |
| MS.gene012917.t1 | AT1G24260 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 5.28e-21 | 90.1 |
| MS.gene012917.t1 | AT4G24540 | 43.750 | 128 | 61 | 4 | 1 | 119 | 1 | 126 | 5.59e-21 | 89.7 |
| MS.gene012917.t1 | AT5G10140 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 5.77e-21 | 89.0 |
| MS.gene012917.t1 | AT5G10140 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 6.01e-21 | 89.0 |
| MS.gene012917.t1 | AT1G24260 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 6.04e-21 | 90.5 |
| MS.gene012917.t1 | AT2G45660 | 32.759 | 174 | 90 | 3 | 1 | 174 | 1 | 147 | 6.04e-21 | 89.7 |
| MS.gene012917.t1 | AT1G24260 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 6.40e-21 | 90.5 |
| MS.gene012917.t1 | AT5G62165 | 42.336 | 137 | 62 | 4 | 1 | 132 | 1 | 125 | 6.40e-21 | 89.4 |
| MS.gene012917.t1 | AT5G62165 | 42.336 | 137 | 62 | 4 | 1 | 132 | 1 | 125 | 6.40e-21 | 89.4 |
| MS.gene012917.t1 | AT5G62165 | 42.336 | 137 | 62 | 4 | 1 | 132 | 1 | 125 | 6.40e-21 | 89.4 |
| MS.gene012917.t1 | AT5G10140 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 6.47e-21 | 89.0 |
| MS.gene012917.t1 | AT5G51870 | 46.602 | 103 | 52 | 2 | 1 | 103 | 1 | 100 | 7.14e-21 | 89.4 |
| MS.gene012917.t1 | AT5G51870 | 46.602 | 103 | 52 | 2 | 1 | 103 | 24 | 123 | 7.38e-21 | 89.0 |
| MS.gene012917.t1 | AT5G51870 | 46.602 | 103 | 52 | 2 | 1 | 103 | 1 | 100 | 1.42e-20 | 88.6 |
| MS.gene012917.t1 | AT3G02310 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 1.87e-20 | 87.8 |
| MS.gene012917.t1 | AT5G51870 | 46.602 | 103 | 52 | 2 | 1 | 103 | 11 | 110 | 1.89e-20 | 88.6 |
| MS.gene012917.t1 | AT3G61120 | 44.660 | 103 | 54 | 2 | 1 | 101 | 1 | 102 | 2.39e-20 | 88.6 |
| MS.gene012917.t1 | AT4G22950 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 2.71e-20 | 86.7 |
| MS.gene012917.t1 | AT3G02310 | 34.595 | 185 | 87 | 3 | 1 | 180 | 1 | 156 | 3.43e-20 | 88.2 |
| MS.gene012917.t1 | AT5G15800 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 4.67e-20 | 88.2 |
| MS.gene012917.t1 | AT2G22540 | 30.400 | 250 | 140 | 11 | 1 | 229 | 1 | 237 | 5.91e-20 | 87.4 |
| MS.gene012917.t1 | AT2G22540 | 30.400 | 250 | 140 | 11 | 1 | 229 | 1 | 237 | 5.91e-20 | 87.4 |
| MS.gene012917.t1 | AT5G15800 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 6.06e-20 | 87.8 |
| MS.gene012917.t1 | AT5G23260 | 47.115 | 104 | 45 | 3 | 1 | 98 | 1 | 100 | 7.70e-20 | 87.0 |
| MS.gene012917.t1 | AT5G23260 | 47.115 | 104 | 45 | 3 | 1 | 98 | 1 | 100 | 8.52e-20 | 87.4 |
| MS.gene012917.t1 | AT5G23260 | 47.115 | 104 | 45 | 3 | 1 | 98 | 17 | 116 | 1.27e-19 | 87.0 |
| MS.gene012917.t1 | AT4G22950 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 1.29e-19 | 86.3 |
| MS.gene012917.t1 | AT4G22950 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 1.29e-19 | 86.3 |
| MS.gene012917.t1 | AT5G23260 | 47.115 | 104 | 45 | 3 | 1 | 98 | 17 | 116 | 1.36e-19 | 87.0 |
| MS.gene012917.t1 | AT5G65070 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 1.80e-19 | 83.6 |
| MS.gene012917.t1 | AT4G37940 | 31.844 | 179 | 94 | 3 | 1 | 179 | 1 | 151 | 2.07e-19 | 85.5 |
| MS.gene012917.t1 | AT5G13790 | 51.807 | 83 | 39 | 1 | 1 | 83 | 1 | 82 | 2.73e-19 | 86.3 |
| MS.gene012917.t1 | AT5G65070 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 3.42e-19 | 84.3 |
| MS.gene012917.t1 | AT1G71692 | 46.835 | 79 | 42 | 0 | 1 | 79 | 1 | 79 | 4.61e-19 | 84.3 |
| MS.gene012917.t1 | AT2G22540 | 61.429 | 70 | 21 | 2 | 1 | 70 | 1 | 64 | 4.89e-19 | 84.7 |
| MS.gene012917.t1 | AT5G13790 | 56.944 | 72 | 30 | 1 | 1 | 72 | 1 | 71 | 6.79e-19 | 85.1 |
| MS.gene012917.t1 | AT5G65070 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 8.63e-19 | 83.6 |
| MS.gene012917.t1 | AT5G65070 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 9.75e-19 | 84.0 |
| MS.gene012917.t1 | AT2G03710 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 1.27e-18 | 82.4 |
| MS.gene012917.t1 | AT4G37940 | 32.544 | 169 | 86 | 3 | 1 | 169 | 1 | 141 | 1.42e-18 | 82.0 |
| MS.gene012917.t1 | AT4G37940 | 32.558 | 172 | 88 | 3 | 1 | 172 | 1 | 144 | 1.57e-18 | 83.2 |
| MS.gene012917.t1 | AT2G03710 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 3.41e-18 | 83.2 |
| MS.gene012917.t1 | AT2G03710 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 3.43e-18 | 82.8 |
| MS.gene012917.t1 | AT2G14210 | 34.884 | 172 | 85 | 2 | 1 | 172 | 1 | 145 | 4.15e-18 | 82.4 |
| MS.gene012917.t1 | AT2G14210 | 34.884 | 172 | 85 | 2 | 1 | 172 | 1 | 145 | 6.11e-18 | 81.6 |
| MS.gene012917.t1 | AT5G51860 | 57.143 | 70 | 29 | 1 | 1 | 70 | 1 | 69 | 7.78e-18 | 80.9 |
| MS.gene012917.t1 | AT5G51860 | 57.143 | 70 | 29 | 1 | 1 | 70 | 1 | 69 | 9.67e-18 | 80.9 |
| MS.gene012917.t1 | AT5G65070 | 57.576 | 66 | 27 | 1 | 1 | 65 | 1 | 66 | 5.21e-17 | 79.3 |
| MS.gene012917.t1 | AT5G20240 | 64.151 | 53 | 19 | 0 | 1 | 53 | 1 | 53 | 5.41e-17 | 77.0 |
| MS.gene012917.t1 | AT5G65050 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 7.08e-17 | 77.4 |
| MS.gene012917.t1 | AT2G34440 | 36.538 | 104 | 64 | 2 | 1 | 103 | 1 | 103 | 1.38e-16 | 76.6 |
| MS.gene012917.t1 | AT2G26320 | 48.101 | 79 | 40 | 1 | 1 | 78 | 17 | 95 | 1.49e-16 | 74.7 |
| MS.gene012917.t1 | AT5G20240 | 64.151 | 53 | 19 | 0 | 1 | 53 | 1 | 53 | 1.51e-16 | 77.4 |
| MS.gene012917.t1 | AT5G65050 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 2.52e-16 | 76.3 |
| MS.gene012917.t1 | AT5G65050 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 2.61e-16 | 76.3 |
| MS.gene012917.t1 | AT5G65050 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 2.80e-16 | 76.3 |
| MS.gene012917.t1 | AT1G31140 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 4.08e-16 | 76.3 |
| MS.gene012917.t1 | AT1G31140 | 57.746 | 71 | 29 | 1 | 1 | 70 | 1 | 71 | 4.30e-16 | 76.3 |
| MS.gene012917.t1 | AT2G22630 | 52.857 | 70 | 32 | 1 | 1 | 70 | 1 | 69 | 1.00e-15 | 75.5 |
| MS.gene012917.t1 | AT2G22630 | 52.857 | 70 | 32 | 1 | 1 | 70 | 1 | 69 | 1.00e-15 | 75.5 |
| MS.gene012917.t1 | AT5G60440 | 28.000 | 275 | 162 | 10 | 2 | 272 | 7 | 249 | 1.15e-15 | 76.6 |
| MS.gene012917.t1 | AT2G24840 | 48.611 | 72 | 36 | 1 | 1 | 72 | 62 | 132 | 1.73e-15 | 75.5 |
| MS.gene012917.t1 | AT5G65060 | 47.143 | 70 | 37 | 0 | 1 | 70 | 1 | 70 | 4.32e-15 | 72.8 |
| MS.gene012917.t1 | AT5G65060 | 47.143 | 70 | 37 | 0 | 1 | 70 | 1 | 70 | 4.44e-15 | 72.8 |
| MS.gene012917.t1 | AT5G65060 | 47.143 | 70 | 37 | 0 | 1 | 70 | 1 | 70 | 4.74e-15 | 72.8 |
| MS.gene012917.t1 | AT4G36590 | 46.988 | 83 | 42 | 2 | 2 | 84 | 7 | 87 | 5.89e-15 | 73.6 |
| MS.gene012917.t1 | AT3G66656 | 45.833 | 72 | 38 | 1 | 1 | 72 | 1 | 71 | 1.29e-14 | 71.2 |
| MS.gene012917.t1 | AT1G01530 | 48.529 | 68 | 34 | 1 | 1 | 68 | 6 | 72 | 1.51e-14 | 72.4 |
| MS.gene012917.t1 | AT5G65080 | 36.607 | 112 | 60 | 2 | 1 | 101 | 8 | 119 | 2.26e-14 | 70.9 |
| MS.gene012917.t1 | AT1G77080 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 8.84e-14 | 68.9 |
| MS.gene012917.t1 | AT1G77080 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 1.08e-13 | 68.6 |
| MS.gene012917.t1 | AT1G77080 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 1.91e-13 | 68.6 |
| MS.gene012917.t1 | AT1G77080 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 3.85e-13 | 68.2 |
| MS.gene012917.t1 | AT5G65080 | 36.937 | 111 | 60 | 2 | 1 | 101 | 8 | 118 | 1.03e-12 | 66.6 |
| MS.gene012917.t1 | AT1G28460 | 47.887 | 71 | 36 | 1 | 2 | 72 | 8 | 77 | 1.30e-12 | 65.9 |
| MS.gene012917.t1 | AT1G72350 | 48.571 | 70 | 33 | 1 | 2 | 71 | 43 | 109 | 2.69e-12 | 65.9 |
| MS.gene012917.t1 | AT1G65360 | 42.857 | 70 | 39 | 1 | 1 | 70 | 6 | 74 | 2.98e-12 | 65.5 |
| MS.gene012917.t1 | AT1G77080 | 70.000 | 40 | 12 | 0 | 1 | 40 | 1 | 40 | 5.36e-12 | 63.2 |
| MS.gene012917.t1 | AT1G77080 | 70.000 | 40 | 12 | 0 | 1 | 40 | 1 | 40 | 1.01e-11 | 63.5 |
| MS.gene012917.t1 | AT1G29962 | 43.662 | 71 | 39 | 1 | 2 | 72 | 8 | 77 | 1.56e-11 | 62.8 |
| MS.gene012917.t1 | AT1G47760 | 38.889 | 90 | 52 | 2 | 1 | 88 | 1 | 89 | 5.59e-11 | 61.2 |
| MS.gene012917.t1 | AT1G28450 | 28.070 | 171 | 115 | 5 | 2 | 168 | 8 | 174 | 8.54e-11 | 60.8 |
Find 63 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTCAGTTTGGACAGGTTA+TGG | 0.296881 | 3.4:-90173595 | MS.gene012917:CDS |
| TGGGAGCACCTCCATCAATT+AGG | 0.354954 | 3.4:-90173555 | MS.gene012917:intron |
| TGGATACCAATTTGTCCTCT+TGG | 0.364028 | 3.4:-90173575 | MS.gene012917:CDS |
| GGAACTACAGAGAATGTATT+AGG | 0.368902 | 3.4:-90173909 | MS.gene012917:CDS |
| TACCTTCCACGTTCACTGTC+TGG | 0.381164 | 3.4:+90175140 | None:intergenic |
| GTCAGCCTCTGCAGCATCCC+TGG | 0.382937 | 3.4:+90173635 | None:intergenic |
| TCAACTTTCTAAGCACCTTT+CGG | 0.388464 | 3.4:+90174671 | None:intergenic |
| GTGCTCCCAAGAGGACAAAT+TGG | 0.392637 | 3.4:+90173569 | None:intergenic |
| ACTGAGTACTGTTGTTGATA+TGG | 0.393694 | 3.4:-90173718 | MS.gene012917:CDS |
| GGATACCAATTTGTCCTCTT+GGG | 0.396151 | 3.4:-90173574 | MS.gene012917:CDS |
| TGTATTAGGTTGGTTTCCTC+AGG | 0.402453 | 3.4:-90173895 | MS.gene012917:CDS |
| TATTAACAAATACCTTTAGT+TGG | 0.408282 | 3.4:+90174464 | None:intergenic |
| ATTTATTTGCAAGTCTCAAT+TGG | 0.411776 | 3.4:-90174333 | MS.gene012917:CDS |
| TCAAGTAAGTACCTAATTGA+TGG | 0.427316 | 3.4:+90173544 | None:intergenic |
| GAAGATTTATATATCGTTCA+AGG | 0.430508 | 3.4:+90175162 | None:intergenic |
| AATGCGCTAAGTACTCAGTT+TGG | 0.449112 | 3.4:-90173606 | MS.gene012917:CDS |
| GATGTAGATGGATTTGTTGC+TGG | 0.452248 | 3.4:-90173930 | MS.gene012917:CDS |
| TGTTTGAAGTTGACCATGAT+TGG | 0.468690 | 3.4:+90173214 | None:intergenic |
| AAAGTTCAGAATCTGATCAT+TGG | 0.482587 | 3.4:+90173866 | None:intergenic |
| CAAGTCTCAATTGGAAGAGA+TGG | 0.484876 | 3.4:-90174324 | MS.gene012917:CDS |
| AATATCTTCATAACCAATCA+TGG | 0.488832 | 3.4:-90173227 | MS.gene012917:CDS |
| CGACGTTTGCAGAGTTCAGA+AGG | 0.490783 | 3.4:+90173679 | None:intergenic |
| CTTACCACCCTTCTCCTCTC+AGG | 0.492758 | 3.4:-90173836 | MS.gene012917:intron |
| CTTGTCTCTGCAACTGACAA+TGG | 0.498020 | 3.4:+90173296 | None:intergenic |
| TTGGTTATGAAGATATTTGA+CGG | 0.516471 | 3.4:+90173233 | None:intergenic |
| AAGAGAGTGGCTCTCCCAGA+TGG | 0.518657 | 3.4:+90175318 | None:intergenic |
| AGTTGGAAGTCTGTAATCGT+AGG | 0.521006 | 3.4:+90174481 | None:intergenic |
| ACTTTCTCAAAGAGAAGGAA+TGG | 0.526970 | 3.4:-90175408 | MS.gene012917:CDS |
| CTACAGAGAATGTATTAGGT+TGG | 0.528198 | 3.4:-90173905 | MS.gene012917:CDS |
| GTTCTATGTGATGTTGATGT+CGG | 0.532669 | 3.4:-90175357 | MS.gene012917:CDS |
| ATCAGATATGCCAAGCTCCT+AGG | 0.535164 | 3.4:-90174636 | MS.gene012917:intron |
| AAGAGATGGAGAATCGACTA+AGG | 0.538298 | 3.4:-90174310 | MS.gene012917:intron |
| TGAGAACATAACAAATAGAC+AGG | 0.539051 | 3.4:-90175433 | MS.gene012917:CDS |
| ATATCGTGAACAAGTCCTAC+AGG | 0.539458 | 3.4:-90174107 | MS.gene012917:CDS |
| TCAGCCTCTGCAGCATCCCT+GGG | 0.548602 | 3.4:+90173636 | None:intergenic |
| ACACTTGTCAAATTAGTCCC+AGG | 0.549128 | 3.4:-90173653 | MS.gene012917:CDS |
| GTTGGAAGTCTGTAATCGTA+GGG | 0.550926 | 3.4:+90174482 | None:intergenic |
| CACAATGTGGTAATCTCTGA+AGG | 0.551793 | 3.4:+90174139 | None:intergenic |
| AGGAGAAGGGTGGTAAGCAT+TGG | 0.553311 | 3.4:+90173842 | None:intergenic |
| GCTAAGTACTCAGTTTGGAC+AGG | 0.568958 | 3.4:-90173601 | MS.gene012917:CDS |
| GTGGAAAATACCTAGGAGCT+TGG | 0.572359 | 3.4:+90174626 | None:intergenic |
| TCAGTTGCAGAGACAAGAGA+AGG | 0.586488 | 3.4:-90173290 | MS.gene012917:CDS |
| AGGTTACTTTCTCAAAGAGA+AGG | 0.588558 | 3.4:-90175413 | MS.gene012917:CDS |
| GAGTTCAGAAGGGTCGAAGT+TGG | 0.589393 | 3.4:+90173690 | None:intergenic |
| TAGTCCCAGGGATGCTGCAG+AGG | 0.589902 | 3.4:-90173640 | MS.gene012917:CDS |
| GATTACAGACTTCCAACTAA+AGG | 0.598201 | 3.4:-90174476 | MS.gene012917:intron |
| GTATTAGGTTGGTTTCCTCA+GGG | 0.607496 | 3.4:-90173894 | MS.gene012917:CDS |
| CACTTGTCAAATTAGTCCCA+GGG | 0.610153 | 3.4:-90173652 | MS.gene012917:CDS |
| TTCCAGACAGTGAACGTGGA+AGG | 0.612412 | 3.4:-90175142 | MS.gene012917:intron |
| ATGAAGGATGCATAATCAAG+AGG | 0.614891 | 3.4:-90174792 | MS.gene012917:intron |
| AGAGATTACCACATTGTGCG+AGG | 0.621330 | 3.4:-90174134 | MS.gene012917:CDS |
| CAGTTGCAGAGACAAGAGAA+GGG | 0.631630 | 3.4:-90173289 | MS.gene012917:CDS |
| AAAAGTACCTGAGAGGAGAA+GGG | 0.637245 | 3.4:+90173829 | None:intergenic |
| GTCTCTGTAGCACATCCGAA+AGG | 0.648532 | 3.4:-90174686 | MS.gene012917:intron |
| AATCTTCCAGACAGTGAACG+TGG | 0.648566 | 3.4:-90175146 | MS.gene012917:CDS |
| GACGTTTGCAGAGTTCAGAA+GGG | 0.664429 | 3.4:+90173680 | None:intergenic |
| AGTAAGTACCTAATTGATGG+AGG | 0.665939 | 3.4:+90173547 | None:intergenic |
| TTGATGGAGGTGCTCCCAAG+AGG | 0.668389 | 3.4:+90173560 | None:intergenic |
| TCTATTGCCAGAAAAGAGAG+TGG | 0.678462 | 3.4:+90175305 | None:intergenic |
| GATTACCACATTGTGCGAGG+CGG | 0.687602 | 3.4:-90174131 | MS.gene012917:CDS |
| ATATTCCGCCTCGCACAATG+TGG | 0.688829 | 3.4:+90174126 | None:intergenic |
| TGATCATTGGTATCTCCCTG+AGG | 0.724655 | 3.4:+90173879 | None:intergenic |
| AGTACCTGAGAGGAGAAGGG+TGG | 0.732351 | 3.4:+90173832 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTAATATATACCATA+AGG | - | chr3.4:90174090-90174109 | MS.gene012917:CDS | 10.0% |
| !! | AATTTGTATCAAATTGTTTA+TGG | - | chr3.4:90174905-90174924 | MS.gene012917:intron | 15.0% |
| !! | TCAAATAATGTTATATATGT+TGG | - | chr3.4:90174278-90174297 | MS.gene012917:intron | 15.0% |
| !! | TGTAATCTACTAATAATAAT+TGG | - | chr3.4:90174120-90174139 | MS.gene012917:CDS | 15.0% |
| !!! | ATAATTTTTAGGATATTTGA+AGG | - | chr3.4:90174510-90174529 | MS.gene012917:intron | 15.0% |
| !!! | CTGAAAATTTACTTTTTATT+TGG | - | chr3.4:90175225-90175244 | MS.gene012917:intron | 15.0% |
| !!! | TTTTTCATGCTATAATTTTT+AGG | - | chr3.4:90174499-90174518 | MS.gene012917:intron | 15.0% |
| !! | AACATATGAAATTACGAATT+TGG | + | chr3.4:90173773-90173792 | None:intergenic | 20.0% |
| !! | TATTAACAAATACCTTTAGT+TGG | + | chr3.4:90174215-90174234 | None:intergenic | 20.0% |
| !!! | ATCAATTTTCAAATGTTCTT+GGG | - | chr3.4:90173937-90173956 | MS.gene012917:CDS | 20.0% |
| !!! | GAAAGTTCAAATTTTAAGAT+CGG | + | chr3.4:90173691-90173710 | None:intergenic | 20.0% |
| ! | AATAAATCTATGTGAACTTC+AGG | - | chr3.4:90174304-90174323 | MS.gene012917:intron | 25.0% |
| ! | AATATCTTCATAACCAATCA+TGG | - | chr3.4:90175449-90175468 | MS.gene012917:CDS | 25.0% |
| ! | AGAAGTTAAGCAATGATATA+GGG | + | chr3.4:90174399-90174418 | None:intergenic | 25.0% |
| ! | AGATTACAATTCAAACCTTA+TGG | + | chr3.4:90174108-90174127 | None:intergenic | 25.0% |
| ! | ATTTATTTGCAAGTCTCAAT+TGG | - | chr3.4:90174343-90174362 | MS.gene012917:CDS | 25.0% |
| ! | GAAGATTTATATATCGTTCA+AGG | + | chr3.4:90173517-90173536 | None:intergenic | 25.0% |
| ! | TAGAAGTTAAGCAATGATAT+AGG | + | chr3.4:90174400-90174419 | None:intergenic | 25.0% |
| ! | TCTTTATCGTAGCTAATTAT+TGG | - | chr3.4:90174664-90174683 | MS.gene012917:CDS | 25.0% |
| ! | TTGGTTATGAAGATATTTGA+CGG | + | chr3.4:90175446-90175465 | None:intergenic | 25.0% |
| !! | CATCAATTTTCAAATGTTCT+TGG | - | chr3.4:90173936-90173955 | MS.gene012917:CDS | 25.0% |
| !! | TTCCTATTTTATCCTAATGT+TGG | - | chr3.4:90173820-90173839 | MS.gene012917:intron | 25.0% |
| !!! | TAATAATAATTGGCTTGTAG+AGG | - | chr3.4:90174130-90174149 | MS.gene012917:CDS | 25.0% |
| AAAGTTCAGAATCTGATCAT+TGG | + | chr3.4:90174813-90174832 | None:intergenic | 30.0% | |
| AAGATTTGATCGAGATCAAA+CGG | - | chr3.4:90173635-90173654 | MS.gene012917:CDS | 30.0% | |
| AAGTATCAAGTATGAAGTAC+TGG | + | chr3.4:90173802-90173821 | None:intergenic | 30.0% | |
| ACAAAAACTGTAGATGTAGA+TGG | - | chr3.4:90174734-90174753 | MS.gene012917:intron | 30.0% | |
| ACTGGACAATTGAAAATCAA+TGG | + | chr3.4:90174878-90174897 | None:intergenic | 30.0% | |
| ATCAAACTAAAAATGAGCTG+TGG | + | chr3.4:90174072-90174091 | None:intergenic | 30.0% | |
| CACCAACATTAGGATAAAAT+AGG | + | chr3.4:90173825-90173844 | None:intergenic | 30.0% | |
| GCAAGCAACAACATAATTAA+AGG | + | chr3.4:90174172-90174191 | None:intergenic | 30.0% | |
| TCAAGTAAGTACCTAATTGA+TGG | + | chr3.4:90175135-90175154 | None:intergenic | 30.0% | |
| TGAGAACATAACAAATAGAC+AGG | - | chr3.4:90173243-90173262 | MS.gene012917:CDS | 30.0% | |
| TGATACAAATTCACTTGAAC+TGG | + | chr3.4:90174896-90174915 | None:intergenic | 30.0% | |
| ! | CTATTTTATCCTAATGTTGG+TGG | - | chr3.4:90173823-90173842 | MS.gene012917:intron | 30.0% |
| !! | CTTGATTTGATAATGCACAT+TGG | - | chr3.4:90175187-90175206 | MS.gene012917:intron | 30.0% |
| AAATCTATGTGAACTTCAGG+AGG | - | chr3.4:90174307-90174326 | MS.gene012917:intron | 35.0% | |
| AATGACTCCAAAACTAAGCT+TGG | + | chr3.4:90175308-90175327 | None:intergenic | 35.0% | |
| ACTTTCTCAAAGAGAAGGAA+TGG | - | chr3.4:90173268-90173287 | MS.gene012917:CDS | 35.0% | |
| AGTAAGTACCTAATTGATGG+AGG | + | chr3.4:90175132-90175151 | None:intergenic | 35.0% | |
| ATGAAGGATGCATAATCAAG+AGG | - | chr3.4:90173884-90173903 | MS.gene012917:CDS | 35.0% | |
| ATGACTCCAAAACTAAGCTT+GGG | + | chr3.4:90175307-90175326 | None:intergenic | 35.0% | |
| ATGCATCCTTCATAATTGCA+CGG | + | chr3.4:90173877-90173896 | None:intergenic | 35.0% | |
| CTACAGAGAATGTATTAGGT+TGG | - | chr3.4:90174771-90174790 | MS.gene012917:intron | 35.0% | |
| GACAATTTCACACATTCACA+CGG | - | chr3.4:90173587-90173606 | MS.gene012917:CDS | 35.0% | |
| GATTACAGACTTCCAACTAA+AGG | - | chr3.4:90174200-90174219 | MS.gene012917:intron | 35.0% | |
| GGAACTACAGAGAATGTATT+AGG | - | chr3.4:90174767-90174786 | MS.gene012917:intron | 35.0% | |
| GTTCTATGTGATGTTGATGT+CGG | - | chr3.4:90173319-90173338 | MS.gene012917:intron | 35.0% | |
| TCAAAGATACCACCAACATT+AGG | + | chr3.4:90173835-90173854 | None:intergenic | 35.0% | |
| TCAACTTTCTAAGCACCTTT+CGG | + | chr3.4:90174008-90174027 | None:intergenic | 35.0% | |
| TCGCAACAAATCCAAATCTA+GGG | + | chr3.4:90173569-90173588 | None:intergenic | 35.0% | |
| TTGTTACCGTGCAATTATGA+AGG | - | chr3.4:90173868-90173887 | MS.gene012917:CDS | 35.0% | |
| TTTGAACTATTTGCAGAGAG+AGG | - | chr3.4:90175356-90175375 | MS.gene012917:CDS | 35.0% | |
| ! | ACTGAGTACTGTTGTTGATA+TGG | - | chr3.4:90174958-90174977 | MS.gene012917:intron | 35.0% |
| ! | AGGTTACTTTCTCAAAGAGA+AGG | - | chr3.4:90173263-90173282 | MS.gene012917:CDS | 35.0% |
| ! | TCATCATGTTTTCTCCATCT+GGG | - | chr3.4:90173344-90173363 | MS.gene012917:intron | 35.0% |
| ! | TGTTTGAAGTTGACCATGAT+TGG | + | chr3.4:90175465-90175484 | None:intergenic | 35.0% |
| ! | TTTTAGCCCAAGCTTAGTTT+TGG | - | chr3.4:90175298-90175317 | MS.gene012917:intron | 35.0% |
| !! | AACATCTCAGAATCTGGTTT+TGG | + | chr3.4:90174453-90174472 | None:intergenic | 35.0% |
| !! | CAGATTCTGAGATGTTCTAA+AGG | - | chr3.4:90174457-90174476 | MS.gene012917:intron | 35.0% |
| !! | CTTTAGAACATCTCAGAATC+TGG | + | chr3.4:90174459-90174478 | None:intergenic | 35.0% |
| !! | TTTTCTGGCAATAGAAGGTT+TGG | - | chr3.4:90173379-90173398 | MS.gene012917:intron | 35.0% |
| !!! | CTTGTTTTAGAGTTTCCTGT+AGG | + | chr3.4:90174587-90174606 | None:intergenic | 35.0% |
| AAGAGATGGAGAATCGACTA+AGG | - | chr3.4:90174366-90174385 | MS.gene012917:intron | 40.0% | |
| AATGCGCTAAGTACTCAGTT+TGG | - | chr3.4:90175070-90175089 | MS.gene012917:intron | 40.0% | |
| AATTCACGCACTCAACATGT+CGG | + | chr3.4:90173734-90173753 | None:intergenic | 40.0% | |
| ACACTTGTCAAATTAGTCCC+AGG | - | chr3.4:90175023-90175042 | MS.gene012917:intron | 40.0% | |
| AGTTGGAAGTCTGTAATCGT+AGG | + | chr3.4:90174198-90174217 | None:intergenic | 40.0% | |
| ATATCGTGAACAAGTCCTAC+AGG | - | chr3.4:90174569-90174588 | MS.gene012917:intron | 40.0% | |
| ATGAGCTGTGGAAAATACCT+AGG | + | chr3.4:90174060-90174079 | None:intergenic | 40.0% | |
| CAAGTCTCAATTGGAAGAGA+TGG | - | chr3.4:90174352-90174371 | MS.gene012917:CDS | 40.0% | |
| CACAATGTGGTAATCTCTGA+AGG | + | chr3.4:90174540-90174559 | None:intergenic | 40.0% | |
| CACTTGTCAAATTAGTCCCA+GGG | - | chr3.4:90175024-90175043 | MS.gene012917:intron | 40.0% | |
| GGATACCAATTTGTCCTCTT+GGG | - | chr3.4:90175102-90175121 | MS.gene012917:intron | 40.0% | |
| GGTAAGTGATTCCCTAGATT+TGG | - | chr3.4:90173555-90173574 | MS.gene012917:intron | 40.0% | |
| GTCGCAACAAATCCAAATCT+AGG | + | chr3.4:90173570-90173589 | None:intergenic | 40.0% | |
| GTTGGAAGTCTGTAATCGTA+GGG | + | chr3.4:90174197-90174216 | None:intergenic | 40.0% | |
| TACTCAGTTTGGACAGGTTA+TGG | - | chr3.4:90175081-90175100 | MS.gene012917:intron | 40.0% | |
| TCTATTGCCAGAAAAGAGAG+TGG | + | chr3.4:90173374-90173393 | None:intergenic | 40.0% | |
| TGGATACCAATTTGTCCTCT+TGG | - | chr3.4:90175101-90175120 | MS.gene012917:intron | 40.0% | |
| ! | CTCATCATGTTTTCTCCATC+TGG | - | chr3.4:90173343-90173362 | MS.gene012917:intron | 40.0% |
| !! | AAAAAGTACCTGAGAGGAGA+AGG | + | chr3.4:90174851-90174870 | None:intergenic | 40.0% |
| !! | AAAAGTACCTGAGAGGAGAA+GGG | + | chr3.4:90174850-90174869 | None:intergenic | 40.0% |
| !! | CTCTCTTTTCTGGCAATAGA+AGG | - | chr3.4:90173374-90173393 | MS.gene012917:intron | 40.0% |
| !! | GATGTAGATGGATTTGTTGC+TGG | - | chr3.4:90174746-90174765 | MS.gene012917:intron | 40.0% |
| !! | GGCAATAAAAAGTACCTGAG+AGG | + | chr3.4:90174857-90174876 | None:intergenic | 40.0% |
| !! | GTATTAGGTTGGTTTCCTCA+GGG | - | chr3.4:90174782-90174801 | MS.gene012917:intron | 40.0% |
| !! | TGTATTAGGTTGGTTTCCTC+AGG | - | chr3.4:90174781-90174800 | MS.gene012917:intron | 40.0% |
| AATCTTCCAGACAGTGAACG+TGG | - | chr3.4:90173530-90173549 | MS.gene012917:intron | 45.0% | |
| AGAGATTACCACATTGTGCG+AGG | - | chr3.4:90174542-90174561 | MS.gene012917:intron | 45.0% | |
| ATCAGATATGCCAAGCTCCT+AGG | - | chr3.4:90174040-90174059 | MS.gene012917:intron | 45.0% | |
| CAGTTGCAGAGACAAGAGAA+GGG | - | chr3.4:90175387-90175406 | MS.gene012917:CDS | 45.0% | |
| CTTGTCTCTGCAACTGACAA+TGG | + | chr3.4:90175383-90175402 | None:intergenic | 45.0% | |
| GACGTTTGCAGAGTTCAGAA+GGG | + | chr3.4:90174999-90175018 | None:intergenic | 45.0% | |
| GCTAAGTACTCAGTTTGGAC+AGG | - | chr3.4:90175075-90175094 | MS.gene012917:intron | 45.0% | |
| GGTGGTTGTTGGATCAAGAT+CGG | + | chr3.4:90173713-90173732 | None:intergenic | 45.0% | |
| GTGGAAAATACCTAGGAGCT+TGG | + | chr3.4:90174053-90174072 | None:intergenic | 45.0% | |
| TCAGTTGCAGAGACAAGAGA+AGG | - | chr3.4:90175386-90175405 | MS.gene012917:CDS | 45.0% | |
| TGATCATTGGTATCTCCCTG+AGG | + | chr3.4:90174800-90174819 | None:intergenic | 45.0% | |
| !! | ATTGGCTTGTAGAGGCTTTC+TGG | - | chr3.4:90174138-90174157 | MS.gene012917:CDS | 45.0% |
| !! | ATAAATTAATTATTATGATT+AGG | - | chr3.4:90174703-90174722 | MS.gene012917:intron | 5.0% |
| AGGAGAAGGGTGGTAAGCAT+TGG | + | chr3.4:90174837-90174856 | None:intergenic | 50.0% | |
| ATATTCCGCCTCGCACAATG+TGG | + | chr3.4:90174553-90174572 | None:intergenic | 50.0% | |
| CGACGTTTGCAGAGTTCAGA+AGG | + | chr3.4:90175000-90175019 | None:intergenic | 50.0% | |
| CTCAACATGTCGGTGGTTGT+TGG | + | chr3.4:90173724-90173743 | None:intergenic | 50.0% | |
| GAGTTCAGAAGGGTCGAAGT+TGG | + | chr3.4:90174989-90175008 | None:intergenic | 50.0% | |
| GATTACCACATTGTGCGAGG+CGG | - | chr3.4:90174545-90174564 | MS.gene012917:intron | 50.0% | |
| GTCTCTGTAGCACATCCGAA+AGG | - | chr3.4:90173990-90174009 | MS.gene012917:intron | 50.0% | |
| GTGCTCCCAAGAGGACAAAT+TGG | + | chr3.4:90175110-90175129 | None:intergenic | 50.0% | |
| TACCTTCCACGTTCACTGTC+TGG | + | chr3.4:90173539-90173558 | None:intergenic | 50.0% | |
| TTCCAGACAGTGAACGTGGA+AGG | - | chr3.4:90173534-90173553 | MS.gene012917:intron | 50.0% | |
| !! | TGGGAGCACCTCCATCAATT+AGG | - | chr3.4:90175121-90175140 | MS.gene012917:intron | 50.0% |
| AAGAGAGTGGCTCTCCCAGA+TGG | + | chr3.4:90173361-90173380 | None:intergenic | 55.0% | |
| AGTACCTGAGAGGAGAAGGG+TGG | + | chr3.4:90174847-90174866 | None:intergenic | 55.0% | |
| CTTACCACCCTTCTCCTCTC+AGG | - | chr3.4:90174840-90174859 | MS.gene012917:intron | 55.0% | |
| TCAAACTGCCAGCGATGTGC+TGG | + | chr3.4:90173613-90173632 | None:intergenic | 55.0% | |
| TCACGCACTCAACATGTCGG+TGG | + | chr3.4:90173731-90173750 | None:intergenic | 55.0% | |
| ! | GGGAGAGCCACTCTCTTTTC+TGG | - | chr3.4:90173364-90173383 | MS.gene012917:intron | 55.0% |
| !! | TTGATGGAGGTGCTCCCAAG+AGG | + | chr3.4:90175119-90175138 | None:intergenic | 55.0% |
| TAGTCCCAGGGATGCTGCAG+AGG | - | chr3.4:90175036-90175055 | MS.gene012917:intron | 60.0% | |
| TCAGCCTCTGCAGCATCCCT+GGG | + | chr3.4:90175043-90175062 | None:intergenic | 60.0% | |
| GTCAGCCTCTGCAGCATCCC+TGG | + | chr3.4:90175044-90175063 | None:intergenic | 65.0% | |
| TCACACGGCCAGCACATCGC+TGG | - | chr3.4:90173602-90173621 | MS.gene012917:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 90173211 | 90175487 | 90173211 | ID=MS.gene012917 |
| chr3.4 | mRNA | 90173211 | 90175487 | 90173211 | ID=MS.gene012917.t1;Parent=MS.gene012917 |
| chr3.4 | exon | 90175303 | 90175487 | 90175303 | ID=MS.gene012917.t1.exon1;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90175303 | 90175487 | 90175303 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90175143 | 90175196 | 90175143 | ID=MS.gene012917.t1.exon2;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90175143 | 90175196 | 90175143 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90174793 | 90174808 | 90174793 | ID=MS.gene012917.t1.exon3;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90174793 | 90174808 | 90174793 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90174637 | 90174698 | 90174637 | ID=MS.gene012917.t1.exon4;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90174637 | 90174698 | 90174637 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90174477 | 90174504 | 90174477 | ID=MS.gene012917.t1.exon5;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90174477 | 90174504 | 90174477 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90174311 | 90174372 | 90174311 | ID=MS.gene012917.t1.exon6;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90174311 | 90174372 | 90174311 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90174078 | 90174177 | 90174078 | ID=MS.gene012917.t1.exon7;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90174078 | 90174177 | 90174078 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90173837 | 90173973 | 90173837 | ID=MS.gene012917.t1.exon8;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90173837 | 90173973 | 90173837 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90173556 | 90173752 | 90173556 | ID=MS.gene012917.t1.exon9;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90173556 | 90173752 | 90173556 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| chr3.4 | exon | 90173211 | 90173326 | 90173211 | ID=MS.gene012917.t1.exon10;Parent=MS.gene012917.t1 |
| chr3.4 | CDS | 90173211 | 90173326 | 90173211 | ID=cds.MS.gene012917.t1;Parent=MS.gene012917.t1 |
| Gene Sequence |
| Protein sequence |
