AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013155

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013155.t1 MTR_3g099080 96.286 377 12 2 1 376 1 376 0.0 749
MS.gene013155.t1 MTR_8g096780 60.147 409 111 21 1 376 1 390 2.97e-140 404
MS.gene013155.t1 MTR_7g028740 34.080 402 204 13 1 376 1 367 6.01e-56 187
MS.gene013155.t1 MTR_4g109770 55.474 137 41 4 43 172 75 198 6.40e-39 145
MS.gene013155.t1 MTR_2g461920 51.034 145 66 2 43 187 122 261 1.27e-37 142
MS.gene013155.t1 MTR_5g046670 45.752 153 79 1 43 195 194 342 5.02e-37 140
MS.gene013155.t1 MTR_3g085180 50.000 126 61 2 83 206 151 276 9.99e-37 138
MS.gene013155.t1 MTR_7g444860 58.696 92 38 0 87 178 139 230 1.61e-33 127
MS.gene013155.t1 MTR_4g088555 57.000 100 40 1 71 170 40 136 1.72e-31 116
MS.gene013155.t1 MTR_8g080690 52.252 111 52 1 97 206 151 261 4.66e-31 121
MS.gene013155.t1 MTR_7g092930 64.935 77 27 0 97 173 68 144 5.39e-31 120
MS.gene013155.t1 MTR_1g053715 66.234 77 26 0 97 173 74 150 6.35e-31 120
MS.gene013155.t1 MTR_8g463140 64.103 78 28 0 97 174 65 142 9.21e-31 115
MS.gene013155.t1 MTR_1g035010 42.442 172 88 4 97 264 104 268 3.50e-30 122
MS.gene013155.t1 MTR_8g005960 68.421 76 24 0 97 172 187 262 6.99e-30 117
MS.gene013155.t1 MTR_2g014200 61.905 84 32 0 91 174 58 141 1.08e-29 112
MS.gene013155.t1 MTR_1g086250 55.000 100 43 1 83 182 133 230 2.19e-29 120
MS.gene013155.t1 MTR_2g046550 59.302 86 35 0 97 182 139 224 2.28e-29 120
MS.gene013155.t1 MTR_7g110320 50.450 111 52 2 72 182 121 228 1.13e-28 118
MS.gene013155.t1 MTR_7g110320 50.450 111 52 2 72 182 121 228 1.58e-28 117
MS.gene013155.t1 MTR_8g080680 33.607 244 127 8 97 330 132 350 3.05e-28 114
MS.gene013155.t1 MTR_2g078770 53.763 93 43 0 97 189 58 150 5.82e-28 108
MS.gene013155.t1 MTR_8g066240 55.102 98 44 0 40 137 5 102 2.37e-23 93.6
MS.gene013155.t1 MTR_8g080670 58.904 73 30 0 97 169 162 234 4.59e-23 100
MS.gene013155.t1 MTR_2g020620 49.231 65 33 0 106 170 99 163 1.87e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013155.t1 AT5G50670 39.702 403 172 17 1 376 1 359 8.52e-68 218
MS.gene013155.t1 AT5G50670 39.702 403 172 17 1 376 1 359 8.52e-68 218
MS.gene013155.t1 AT5G50570 39.702 403 172 17 1 376 1 359 8.52e-68 218
MS.gene013155.t1 AT5G50570 39.702 403 172 17 1 376 1 359 8.52e-68 218
MS.gene013155.t1 AT1G27370 53.636 110 48 2 64 172 144 251 6.69e-33 126
MS.gene013155.t1 AT1G27370 53.636 110 48 2 64 172 144 251 1.00e-32 126
MS.gene013155.t1 AT1G27370 53.636 110 48 2 64 172 144 251 1.00e-32 126
MS.gene013155.t1 AT1G27370 53.636 110 48 2 64 172 144 251 1.00e-32 126
MS.gene013155.t1 AT1G27370 53.636 110 48 2 64 172 144 251 1.00e-32 126
MS.gene013155.t1 AT1G27370 53.636 110 48 2 64 172 144 251 1.00e-32 126
MS.gene013155.t1 AT1G27370 53.636 110 48 2 64 172 144 251 1.00e-32 126
MS.gene013155.t1 AT1G69170 38.095 231 124 4 76 302 100 315 1.03e-32 127
MS.gene013155.t1 AT1G27360 54.630 108 44 2 66 172 147 250 1.33e-32 126
MS.gene013155.t1 AT1G27360 54.630 108 44 2 66 172 147 250 1.33e-32 126
MS.gene013155.t1 AT1G27360 54.630 108 44 2 66 172 147 250 1.33e-32 126
MS.gene013155.t1 AT1G27360 54.630 108 44 2 66 172 147 250 1.33e-32 126
MS.gene013155.t1 AT2G42200 62.963 81 30 0 97 177 74 154 7.23e-32 124
MS.gene013155.t1 AT1G76580 67.901 81 26 0 97 177 114 194 1.05e-31 127
MS.gene013155.t1 AT2G47070 67.089 79 26 0 97 175 106 184 1.06e-31 127
MS.gene013155.t1 AT1G76580 67.901 81 26 0 97 177 114 194 1.11e-31 127
MS.gene013155.t1 AT5G43270 63.750 80 29 0 94 173 166 245 1.42e-31 124
MS.gene013155.t1 AT5G43270 63.750 80 29 0 94 173 166 245 1.42e-31 124
MS.gene013155.t1 AT5G43270 63.750 80 29 0 94 173 166 245 1.42e-31 124
MS.gene013155.t1 AT1G76580 67.901 81 26 0 97 177 114 194 1.58e-31 126
MS.gene013155.t1 AT3G60030 63.855 83 30 0 94 176 124 206 1.87e-31 126
MS.gene013155.t1 AT3G57920 56.701 97 42 0 77 173 39 135 4.25e-31 121
MS.gene013155.t1 AT2G33810 64.865 74 26 0 97 170 54 127 2.16e-30 113
MS.gene013155.t1 AT1G02065 64.286 84 30 0 87 170 178 261 2.34e-30 119
MS.gene013155.t1 AT1G53160 55.670 97 42 1 97 193 54 149 2.93e-29 111
MS.gene013155.t1 AT1G53160 55.670 97 42 1 97 193 54 149 5.62e-29 111
MS.gene013155.t1 AT1G53160 55.670 97 42 1 97 193 54 149 5.62e-29 111
MS.gene013155.t1 AT1G20980 64.634 82 28 1 97 177 120 201 6.51e-29 119
MS.gene013155.t1 AT3G15270 60.811 74 29 0 97 170 63 136 2.35e-27 107
MS.gene013155.t1 AT2G47070 67.273 55 18 0 121 175 1 55 8.90e-19 88.6
MS.gene013155.t1 AT1G02065 60.345 58 23 0 87 144 178 235 1.51e-17 81.6
MS.gene013155.t1 AT5G18830 48.684 76 38 1 97 171 138 213 8.29e-17 82.8
MS.gene013155.t1 AT5G18830 48.684 76 38 1 97 171 138 213 9.74e-17 82.4
MS.gene013155.t1 AT5G18830 48.684 76 38 1 97 171 138 213 1.03e-16 82.4

Find 91 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGTAGGTGTTGCAATTT+TGG 0.158488 3.3:-81624839 None:intergenic
ACCAACCTTACCTTGGTAAT+TGG 0.160259 3.3:-81626240 None:intergenic
AAAGCACCTTCTTGGGATTT+GGG 0.187536 3.3:+81624646 MS.gene013155:CDS
GTTGGCAGAACCTTTGTTTA+AGG 0.193299 3.3:-81625026 None:intergenic
GAAAGCACCTTCTTGGGATT+TGG 0.238938 3.3:+81624645 MS.gene013155:CDS
ATTTGATTCAAACCATTATC+AGG 0.300493 3.3:-81629179 None:intergenic
GGAATTTGAAAGCACCTTCT+TGG 0.318651 3.3:+81624638 MS.gene013155:CDS
TCTTCCATTGTTTCTATGTT+GGG 0.318840 3.3:-81624691 None:intergenic
GCAACACCTACTTCTTCTTC+AGG 0.325475 3.3:+81624847 MS.gene013155:CDS
ATGGAAGAATCAAACAGATT+TGG 0.341310 3.3:+81624706 MS.gene013155:CDS
GCCAAACCACACCTCTTCTT+AGG 0.344595 3.3:+81629063 MS.gene013155:CDS
TGATCACTCTCACTCCCATT+TGG 0.346060 3.3:-81629296 None:intergenic
TTCATGTAGGTTTCATTCGC+TGG 0.354772 3.3:+81626106 MS.gene013155:intron
TTCTTCCATTGTTTCTATGT+TGG 0.356796 3.3:-81624692 None:intergenic
GATCACTCTCACTCCCATTT+GGG 0.397635 3.3:-81629295 None:intergenic
CTCAACTATTTCCCTATCAA+TGG 0.401247 3.3:+81629372 MS.gene013155:CDS
GAATTTGAAAGCACCTTCTT+GGG 0.406706 3.3:+81624639 MS.gene013155:CDS
ATTTGAAGCTTGGTCAGGTT+GGG 0.406990 3.3:+81624761 MS.gene013155:CDS
GAACTTGCTGGTGTTGGTTG+TGG 0.413226 3.3:-81628932 None:intergenic
CAGACGCACACACCTGATAA+TGG 0.413957 3.3:+81629167 MS.gene013155:CDS
ACTCCAGAGGTTACAATTTG+TGG 0.417163 3.3:+81625003 MS.gene013155:CDS
GTAATTGTAGAGATTATCAT+AGG 0.418535 3.3:+81624950 MS.gene013155:CDS
CTACCAGCAGGTCGCGTGAT+AGG 0.419897 3.3:-81626209 None:intergenic
TCCTAAGAAGAGGTGTGGTT+TGG 0.425134 3.3:-81629064 None:intergenic
CAATTTGTGGCCTTAAACAA+AGG 0.433957 3.3:+81625016 MS.gene013155:CDS
CAGTTTCTTGTCTTGTGGAT+GGG 0.435642 3.3:+81624911 MS.gene013155:CDS
TTGGAGTTTATAAAATGAAA+GGG 0.436768 3.3:+81624725 MS.gene013155:CDS
GAAGGAGTGTTGGTCCCAAA+TGG 0.443655 3.3:+81629281 MS.gene013155:CDS
AGATTATCATAGGCGTCATA+AGG 0.456365 3.3:+81624960 MS.gene013155:CDS
GCAGGTCGCGTGATAGGTTC+AGG 0.457130 3.3:-81626203 None:intergenic
ACAGTTTCTTGTCTTGTGGA+TGG 0.459317 3.3:+81624910 MS.gene013155:CDS
AATGTCTCTTATGCAGCCCT+TGG 0.462202 3.3:+81629220 MS.gene013155:CDS
TGTTGATTTGAAGCTTGGTC+AGG 0.463472 3.3:+81624756 MS.gene013155:CDS
AAGCACCTTCTTGGGATTTG+GGG 0.465651 3.3:+81624647 MS.gene013155:CDS
CATGGCAGTAGAACTTGAAA+AGG 0.466360 3.3:-81628850 None:intergenic
AGCTGTAGGAAACGTTTAGA+TGG 0.466807 3.3:+81626152 MS.gene013155:CDS
AGGCCACAAATTGTAACCTC+TGG 0.469390 3.3:-81625006 None:intergenic
TTTGGAGTTTATAAAATGAA+AGG 0.469867 3.3:+81624724 MS.gene013155:CDS
TGGGACCAACACTCCTTCCA+TGG 0.470666 3.3:-81629276 None:intergenic
ATGTCTCTTATGCAGCCCTT+GGG 0.480370 3.3:+81629221 MS.gene013155:CDS
GGTTCTGCCAACAGTGTAGC+AGG 0.480510 3.3:+81625037 MS.gene013155:CDS
TAACAATAGCTTTGAGTCCA+TGG 0.485578 3.3:+81629259 MS.gene013155:CDS
TTGTTCCTCGTTGTATAACA+TGG 0.491290 3.3:+81629319 MS.gene013155:CDS
CGCGTGATAGGTTCAGGCTG+TGG 0.502946 3.3:-81626197 None:intergenic
CTCATTACTTCCTGTGAAAG+TGG 0.505406 3.3:+81628897 MS.gene013155:CDS
TATCAACCACATGAACTTGC+TGG 0.506816 3.3:-81628944 None:intergenic
TGATAATGGTTTGAATCAAA+TGG 0.506912 3.3:+81629181 MS.gene013155:CDS
TTGTATAACATGGGTTCTGA+TGG 0.507293 3.3:+81629329 MS.gene013155:CDS
TCAACTATTTCCCTATCAAT+GGG 0.507836 3.3:+81629373 MS.gene013155:CDS
ACTGCAACCACCTACGAAGA+AGG 0.508186 3.3:+81628990 MS.gene013155:CDS
TGAGTCCATGGAAGGAGTGT+TGG 0.509096 3.3:+81629271 MS.gene013155:CDS
GAACCTATCACGCGACCTGC+TGG 0.513292 3.3:+81626206 MS.gene013155:CDS
TTGCTACTTGTCCTAAGAAG+AGG 0.514720 3.3:-81629074 None:intergenic
ATTGACAGTTTCTTGTCTTG+TGG 0.515582 3.3:+81624906 MS.gene013155:CDS
AAGTTGTTTCCCTTCTTCGT+AGG 0.524258 3.3:-81629000 None:intergenic
GAAGATCCTGAAGAAGAAGT+AGG 0.539972 3.3:-81624853 None:intergenic
GTGAAGTCTACCACTTTCAC+AGG 0.545148 3.3:-81628907 None:intergenic
AGCACCTTCTTGGGATTTGG+GGG 0.546781 3.3:+81624648 MS.gene013155:CDS
TGTTCCTCGTTGTATAACAT+GGG 0.547164 3.3:+81629320 MS.gene013155:CDS
TTGTTTCCCTTCTTCGTAGG+TGG 0.548824 3.3:-81628997 None:intergenic
TGGAGTTTATAAAATGAAAG+GGG 0.553424 3.3:+81624726 MS.gene013155:CDS
AAGGAGTGTTGGTCCCAAAT+GGG 0.554973 3.3:+81629282 MS.gene013155:CDS
CTGCCATGGTGAATTCAGCT+TGG 0.557661 3.3:+81628865 MS.gene013155:CDS
CTGCAACCACCTACGAAGAA+GGG 0.560980 3.3:+81628991 MS.gene013155:CDS
CCACATGAACTTGCTGGTGT+TGG 0.568946 3.3:-81628938 None:intergenic
CCCTTGGGACTGAGTCTGCA+TGG 0.573686 3.3:+81629236 MS.gene013155:CDS
TGTGGTTTGGCTATGAAGTG+AGG 0.577121 3.3:-81629051 None:intergenic
ATTACCCAACATAGAAACAA+TGG 0.578453 3.3:+81624687 MS.gene013155:CDS
GTGGTTTGGCTATGAAGTGA+GGG 0.584332 3.3:-81629050 None:intergenic
GTGAATTCAGCTTGGAGTAG+CGG 0.589283 3.3:+81628873 MS.gene013155:CDS
GCATCATTAGACAAAGGAAG+TGG 0.590112 3.3:-81624805 None:intergenic
GATTTGAAGCTTGGTCAGGT+TGG 0.592453 3.3:+81624760 MS.gene013155:CDS
CATTGATAGGGAAATAGTTG+AGG 0.598793 3.3:-81629371 None:intergenic
AACTTGAAAAGGGTAGCACC+TGG 0.599492 3.3:-81628839 None:intergenic
ACCATGCAGACTCAGTCCCA+AGG 0.600324 3.3:-81629237 None:intergenic
ATATATACCTGCTACACTGT+TGG 0.601239 3.3:-81625044 None:intergenic
GACAGAAGAGAGAGAGCACA+AGG 0.601971 3.3:-81629137 None:intergenic
AATAGCTTTGAGTCCATGGA+AGG 0.603284 3.3:+81629263 MS.gene013155:CDS
ATGGCAGTAGAACTTGAAAA+GGG 0.604257 3.3:-81628849 None:intergenic
TGCATAAGAGACATTGAATG+AGG 0.607401 3.3:-81629212 None:intergenic
CCATGCAGACTCAGTCCCAA+GGG 0.628449 3.3:-81629236 None:intergenic
ATGGGTTCTGATGGATCACA+AGG 0.638864 3.3:+81629338 MS.gene013155:CDS
GCACCTTCTTGGGATTTGGG+GGG 0.648392 3.3:+81624649 MS.gene013155:CDS
ACTTGAAAAGGGTAGCACCT+GGG 0.652466 3.3:-81628838 None:intergenic
ACTTGTCCTAAGAAGAGGTG+TGG 0.652942 3.3:-81629069 None:intergenic
ACAACAGCATCATTAGACAA+AGG 0.660295 3.3:-81624811 None:intergenic
CCAACACCAGCAAGTTCATG+TGG 0.666058 3.3:+81628938 MS.gene013155:CDS
AGGAAGTGGTGATTGATCAG+TGG 0.671389 3.3:-81624791 None:intergenic
ACTTCATTCTAAGACTCCAG+AGG 0.672861 3.3:+81624990 MS.gene013155:CDS
ACTCCAAGCTGAATTCACCA+TGG 0.715980 3.3:-81628868 None:intergenic
AGAACCCATGTTATACAACG+AGG 0.772576 3.3:-81629324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAATAATATTATTGGT+AGG + chr3.3:81626657-81626676 MS.gene013155:intron 10.0%
!! ATATAATAATATTATTGGTA+GGG + chr3.3:81626658-81626677 MS.gene013155:intron 10.0%
!! TTATTTAATAAATCTAAAAG+AGG + chr3.3:81625363-81625382 MS.gene013155:intron 10.0%
!!! ATATATCATTATTTTGTTAA+TGG - chr3.3:81628740-81628759 None:intergenic 10.0%
!!! TTATTAAATAACTGATTTAT+CGG - chr3.3:81625354-81625373 None:intergenic 10.0%
!! ACAATATTTACTTATAAATG+TGG - chr3.3:81625284-81625303 None:intergenic 15.0%
!! ATATTATAGTCTAGATATAT+CGG - chr3.3:81625328-81625347 None:intergenic 15.0%
!! CAAATAAATATAACATCTAA+AGG + chr3.3:81627487-81627506 MS.gene013155:intron 15.0%
!! CATAATTACATTTAGTTATA+AGG + chr3.3:81625828-81625847 MS.gene013155:intron 15.0%
!! GAAAACATAGTTTAATTATA+TGG + chr3.3:81625934-81625953 MS.gene013155:intron 15.0%
!! GATAGAATAAAATTATAAAG+CGG - chr3.3:81625709-81625728 None:intergenic 15.0%
!! TAGATGTTATATTTATTTGA+TGG - chr3.3:81627486-81627505 None:intergenic 15.0%
!! TTGTACTTTAAATAAACTAA+TGG - chr3.3:81628775-81628794 None:intergenic 15.0%
!!! AATTTTAGAGATTAATTTGA+CGG - chr3.3:81625203-81625222 None:intergenic 15.0%
!!! TTTGAATTTTGATATTATGT+TGG - chr3.3:81627727-81627746 None:intergenic 15.0%
!! CAATTTCTCTTAAAAAACAT+TGG - chr3.3:81626718-81626737 None:intergenic 20.0%
!! CTTGGTTTAAAAAAAAACAA+GGG - chr3.3:81628147-81628166 None:intergenic 20.0%
!! GATAACATGAATTAGAAATT+AGG - chr3.3:81628460-81628479 None:intergenic 20.0%
!! GTAATATAATATGATGCATT+AGG + chr3.3:81628693-81628712 MS.gene013155:intron 20.0%
!! TAAAACCTTTCATAAGATTT+AGG - chr3.3:81627642-81627661 None:intergenic 20.0%
!! TCCTAAAAATTATGAAATAG+CGG - chr3.3:81627276-81627295 None:intergenic 20.0%
!! TTGGAGTTTATAAAATGAAA+GGG + chr3.3:81624725-81624744 MS.gene013155:CDS 20.0%
!! TTTCATGTAAAATGAAATAG+CGG + chr3.3:81628180-81628199 MS.gene013155:intron 20.0%
!! TTTGGTTAAAGAATAAAGAA+AGG - chr3.3:81625652-81625671 None:intergenic 20.0%
!!! CTGTCATAGTTTTAAAATTT+GGG - chr3.3:81628606-81628625 None:intergenic 20.0%
!!! CTGTTATATTTTATAGCTTA+GGG - chr3.3:81625126-81625145 None:intergenic 20.0%
!!! GGATTTAATGTTTTGAATTT+TGG - chr3.3:81627758-81627777 None:intergenic 20.0%
!!! TATTTTGTTAATGGCTAATA+AGG - chr3.3:81628731-81628750 None:intergenic 20.0%
!!! TCTGTCATAGTTTTAAAATT+TGG - chr3.3:81628607-81628626 None:intergenic 20.0%
!!! TCTGTTATATTTTATAGCTT+AGG - chr3.3:81625127-81625146 None:intergenic 20.0%
!!! TTAGTTTGTATATGCATTTA+TGG + chr3.3:81625528-81625547 MS.gene013155:intron 20.0%
!!! TTTCGTAATGTTTTGAATTT+TGG - chr3.3:81627692-81627711 None:intergenic 20.0%
!!! TTTGGAGTTTATAAAATGAA+AGG + chr3.3:81624724-81624743 MS.gene013155:CDS 20.0%
! AAAGGTAATTAAGATGCTAA+AGG - chr3.3:81625634-81625653 None:intergenic 25.0%
! AAATGCATAGTAGTTAATAG+CGG + chr3.3:81627189-81627208 MS.gene013155:intron 25.0%
! AATCTTAATTTCCTTCATGT+AGG + chr3.3:81626093-81626112 MS.gene013155:intron 25.0%
! AGATTAATTAATCGCATGAA+AGG - chr3.3:81626742-81626761 None:intergenic 25.0%
! ATAGGGAGTAATTAACTAAT+CGG + chr3.3:81626941-81626960 MS.gene013155:intron 25.0%
! ATATATTTCCGTATGTTTGT+GGG - chr3.3:81626520-81626539 None:intergenic 25.0%
! ATTTGATTCAAACCATTATC+AGG - chr3.3:81629182-81629201 None:intergenic 25.0%
! CAACATTTAATGCTTTCATT+GGG + chr3.3:81626991-81627010 MS.gene013155:intron 25.0%
! CCTAATAATTTCAGCATTAT+CGG + chr3.3:81626429-81626448 MS.gene013155:intron 25.0%
! CCTTGGTTTAAAAAAAAACA+AGG - chr3.3:81628148-81628167 None:intergenic 25.0%
! GTAATTGTAGAGATTATCAT+AGG + chr3.3:81624950-81624969 MS.gene013155:CDS 25.0%
! TATACTTATATCAGATGAGT+AGG + chr3.3:81626537-81626556 MS.gene013155:intron 25.0%
! TATATATTTCCGTATGTTTG+TGG - chr3.3:81626521-81626540 None:intergenic 25.0%
! TCTAATTCATGTTATCCTTA+AGG + chr3.3:81628464-81628483 MS.gene013155:intron 25.0%
! TGGAGTTTATAAAATGAAAG+GGG + chr3.3:81624726-81624745 MS.gene013155:CDS 25.0%
! TTATTCAGAGTAGTTAATAG+CGG - chr3.3:81628339-81628358 None:intergenic 25.0%
! TTCACGAGTAATAAAATAGA+TGG - chr3.3:81628652-81628671 None:intergenic 25.0%
! TTGAAGCTTCTATAAAGTTA+CGG - chr3.3:81626793-81626812 None:intergenic 25.0%
! TTGATGTATGTGGTTAAATA+GGG + chr3.3:81626924-81626943 MS.gene013155:intron 25.0%
! TTTATAGAAGCTTCAAATTC+AGG + chr3.3:81626797-81626816 MS.gene013155:intron 25.0%
!! AAATAACTGATAGTGCAAAT+TGG + chr3.3:81628487-81628506 MS.gene013155:intron 25.0%
!! ATACATTGCCTAGATATTTT+GGG + chr3.3:81626323-81626342 MS.gene013155:intron 25.0%
!! GATAAACAAGATCATTTTCT+TGG + chr3.3:81628963-81628982 MS.gene013155:CDS 25.0%
!!! ACCGCTATTTCATAATTTTT+AGG + chr3.3:81627272-81627291 MS.gene013155:intron 25.0%
!!! ATTTGAAAAGTTGATGTATG+TGG + chr3.3:81626914-81626933 MS.gene013155:intron 25.0%
!!! CAATGAAAGCATTAAATGTT+GGG - chr3.3:81626992-81627011 None:intergenic 25.0%
!!! CCTTGTTTTTTTTTAAACCA+AGG + chr3.3:81628145-81628164 MS.gene013155:intron 25.0%
!!! TGATAATGGTTTGAATCAAA+TGG + chr3.3:81629181-81629200 MS.gene013155:CDS 25.0%
!!! TTTTACTGCTATACTTTTTC+AGG + chr3.3:81628813-81628832 MS.gene013155:intron 25.0%
AAATTAAGATTCAGGACTTG+AGG - chr3.3:81626084-81626103 None:intergenic 30.0%
AACCACCTAAATCTTATGAA+AGG + chr3.3:81627634-81627653 MS.gene013155:intron 30.0%
AACCTTTCATAAGATTTAGG+TGG - chr3.3:81627639-81627658 None:intergenic 30.0%
AACGCATTTCTCTCAAAAAA+CGG - chr3.3:81628037-81628056 None:intergenic 30.0%
AATTATGTAAGCATGTGTGT+CGG - chr3.3:81625815-81625834 None:intergenic 30.0%
ACAATCCTACAAAATTGACT+CGG - chr3.3:81628565-81628584 None:intergenic 30.0%
ACATAAGTTATGAACCAACT+TGG + chr3.3:81625432-81625451 MS.gene013155:intron 30.0%
ACTATGCATTTATTCTACGT+GGG - chr3.3:81627180-81627199 None:intergenic 30.0%
ACTCATCTTTAAGTAATCGA+TGG - chr3.3:81627061-81627080 None:intergenic 30.0%
AGAGAGAAACTGAAGTTATT+AGG + chr3.3:81628098-81628117 MS.gene013155:intron 30.0%
ATAGAGTATGAACAAAACAG+AGG + chr3.3:81627850-81627869 MS.gene013155:intron 30.0%
ATCTAAATGTCTCGTCTATT+AGG - chr3.3:81628392-81628411 None:intergenic 30.0%
ATGAAAGAAAAAGAAGCTGT+AGG + chr3.3:81626138-81626157 MS.gene013155:CDS 30.0%
ATGGAAGAATCAAACAGATT+TGG + chr3.3:81624706-81624725 MS.gene013155:CDS 30.0%
ATGTTTAATGACTACTTCCT+CGG + chr3.3:81625257-81625276 MS.gene013155:intron 30.0%
ATTACCCAACATAGAAACAA+TGG + chr3.3:81624687-81624706 MS.gene013155:CDS 30.0%
CAAAATCTCGATGAAATATC+AGG - chr3.3:81626835-81626854 None:intergenic 30.0%
CAATCAAAATCTGTTATTCC+CGG + chr3.3:81627415-81627434 MS.gene013155:intron 30.0%
CATATCTAGGCATATATAGT+TGG - chr3.3:81626470-81626489 None:intergenic 30.0%
CATGAAGGAAATTAAGATTC+AGG - chr3.3:81626092-81626111 None:intergenic 30.0%
CCAACATTTAATGCTTTCAT+TGG + chr3.3:81626990-81627009 MS.gene013155:intron 30.0%
CCGATAATGCTGAAATTATT+AGG - chr3.3:81626432-81626451 None:intergenic 30.0%
GAGAGAAACTGAAGTTATTA+GGG + chr3.3:81628099-81628118 MS.gene013155:intron 30.0%
GTTGATGTATGTGGTTAAAT+AGG + chr3.3:81626923-81626942 MS.gene013155:intron 30.0%
TACTATGCATTTATTCTACG+TGG - chr3.3:81627181-81627200 None:intergenic 30.0%
TAGGGAGTAATTAACTAATC+GGG + chr3.3:81626942-81626961 MS.gene013155:intron 30.0%
TAGTCACGTATATAAGCAAA+AGG + chr3.3:81626890-81626909 MS.gene013155:intron 30.0%
TATATTTCCGTATGTTTGTG+GGG - chr3.3:81626519-81626538 None:intergenic 30.0%
TCAACTATTTCCCTATCAAT+GGG + chr3.3:81629373-81629392 MS.gene013155:CDS 30.0%
TCTACAAACCCAAAATATCT+AGG - chr3.3:81626334-81626353 None:intergenic 30.0%
TGAAAATACAAGATTCTCCT+TGG - chr3.3:81628165-81628184 None:intergenic 30.0%
TGTTTATAAATGTGACCAGA+GGG + chr3.3:81625392-81625411 MS.gene013155:intron 30.0%
TGTTTATGAACAAAACAGAG+AGG + chr3.3:81627885-81627904 MS.gene013155:intron 30.0%
TTGTTTATAAATGTGACCAG+AGG + chr3.3:81625391-81625410 MS.gene013155:intron 30.0%
! ACACTTTCAATCTGAAATGT+CGG - chr3.3:81625749-81625768 None:intergenic 30.0%
! ACTGATTTCATATAGCATGT+GGG - chr3.3:81625152-81625171 None:intergenic 30.0%
! ATGTGTTGAGAGATTCTTTT+TGG - chr3.3:81625670-81625689 None:intergenic 30.0%
! CACTATCAGTTATTTCCTTA+AGG - chr3.3:81628482-81628501 None:intergenic 30.0%
! CATACATTGCCTAGATATTT+TGG + chr3.3:81626322-81626341 MS.gene013155:intron 30.0%
! CTGATATTTCATCGAGATTT+TGG + chr3.3:81626833-81626852 MS.gene013155:intron 30.0%
! TGAAGCAAACTCTTTTTGTT+TGG - chr3.3:81626692-81626711 None:intergenic 30.0%
! TTTCAGATTGAAAGTGTGTA+TGG + chr3.3:81625752-81625771 MS.gene013155:intron 30.0%
!! CAATTGAGTGTTAGTCTTAA+TGG - chr3.3:81626371-81626390 None:intergenic 30.0%
!! CCAATGAAAGCATTAAATGT+TGG - chr3.3:81626993-81627012 None:intergenic 30.0%
!! CGTAATGTTTTGAATTTTGG+TGG - chr3.3:81627689-81627708 None:intergenic 30.0%
!! TCTTCCATTGTTTCTATGTT+GGG - chr3.3:81624694-81624713 None:intergenic 30.0%
!! TTCTTCCATTGTTTCTATGT+TGG - chr3.3:81624695-81624714 None:intergenic 30.0%
!! TTTTGAGAGAAATGCGTTTT+GGG + chr3.3:81628039-81628058 MS.gene013155:intron 30.0%
!! TTTTTGAGAGAAATGCGTTT+TGG + chr3.3:81628038-81628057 MS.gene013155:intron 30.0%
!!! AGTTTTTTGTCCAATTACCA+AGG + chr3.3:81626230-81626249 MS.gene013155:CDS 30.0%
!!! CGGGTTTTAAATTTAGATGA+AGG + chr3.3:81626399-81626418 MS.gene013155:intron 30.0%
!!! TTTTCTGTTGATTTGAAGCT+TGG + chr3.3:81624751-81624770 MS.gene013155:CDS 30.0%
AAATGTCTCGTCTATTAGGT+AGG - chr3.3:81628388-81628407 None:intergenic 35.0%
AAGACTAACACTCAATTGTG+AGG + chr3.3:81626373-81626392 MS.gene013155:intron 35.0%
AAGCTTCTATAAAGTTACGG+TGG - chr3.3:81626790-81626809 None:intergenic 35.0%
ACAACAGCATCATTAGACAA+AGG - chr3.3:81624814-81624833 None:intergenic 35.0%
ACCACATTGTTTATCTTGAG+TGG + chr3.3:81626290-81626309 MS.gene013155:intron 35.0%
ACTACTTATAGGCTGGATTA+AGG + chr3.3:81627031-81627050 MS.gene013155:intron 35.0%
AGACATAAATGGACCAAATC+AGG - chr3.3:81626606-81626625 None:intergenic 35.0%
AGATTATCATAGGCGTCATA+AGG + chr3.3:81624960-81624979 MS.gene013155:CDS 35.0%
ATAGAGGATGAACAAAACAG+AGG + chr3.3:81627797-81627816 MS.gene013155:intron 35.0%
ATATATACCTGCTACACTGT+TGG - chr3.3:81625047-81625066 None:intergenic 35.0%
ATCTAGGCAATGTATGCAAA+TGG - chr3.3:81626318-81626337 None:intergenic 35.0%
ATGGCAGTAGAACTTGAAAA+GGG - chr3.3:81628852-81628871 None:intergenic 35.0%
ATTGACAGTTTCTTGTCTTG+TGG + chr3.3:81624906-81624925 MS.gene013155:CDS 35.0%
CATTGATAGGGAAATAGTTG+AGG - chr3.3:81629374-81629393 None:intergenic 35.0%
CCACGAAAATGACTACTTAT+AGG + chr3.3:81627020-81627039 MS.gene013155:intron 35.0%
CGTGAAAAAACATGTTCACA+AGG + chr3.3:81628666-81628685 MS.gene013155:intron 35.0%
CTCAACTATTTCCCTATCAA+TGG + chr3.3:81629372-81629391 MS.gene013155:CDS 35.0%
CTTAGACAAATGGCAATGTT+GGG + chr3.3:81627151-81627170 MS.gene013155:intron 35.0%
GAAAATGACTACTTATAGGC+TGG + chr3.3:81627024-81627043 MS.gene013155:intron 35.0%
GATAATACTAAACACAGCGA+AGG - chr3.3:81627556-81627575 None:intergenic 35.0%
GATATAGTAACTATTCCCTC+TGG - chr3.3:81625410-81625429 None:intergenic 35.0%
GCATGCATCAATTCATATCT+AGG - chr3.3:81626483-81626502 None:intergenic 35.0%
TAAAGATCCCCACAAACATA+CGG + chr3.3:81626509-81626528 MS.gene013155:intron 35.0%
TAGACGAGACATTTAGATTG+AGG + chr3.3:81628394-81628413 MS.gene013155:intron 35.0%
TATGAAGCCAACATGAACAA+TGG - chr3.3:81625592-81625611 None:intergenic 35.0%
TCCACTCAAGATAAACAATG+TGG - chr3.3:81626294-81626313 None:intergenic 35.0%
TCTAGGCAATGTATGCAAAT+GGG - chr3.3:81626317-81626336 None:intergenic 35.0%
TCTTAGACAAATGGCAATGT+TGG + chr3.3:81627150-81627169 MS.gene013155:intron 35.0%
TGCATAAGAGACATTGAATG+AGG - chr3.3:81629215-81629234 None:intergenic 35.0%
TGTTCCTCGTTGTATAACAT+GGG + chr3.3:81629320-81629339 MS.gene013155:CDS 35.0%
TGTTTAATGACTACTTCCTC+GGG + chr3.3:81625258-81625277 MS.gene013155:intron 35.0%
TTAATGCTTTCATTGGGAGT+TGG + chr3.3:81626997-81627016 MS.gene013155:intron 35.0%
TTCCATTCCATTGTTCATGT+TGG + chr3.3:81625582-81625601 MS.gene013155:intron 35.0%
TTGTTCCTCGTTGTATAACA+TGG + chr3.3:81629319-81629338 MS.gene013155:CDS 35.0%
TTTGTCCAATTACCAAGGTA+AGG + chr3.3:81626235-81626254 MS.gene013155:intron 35.0%
! ATTCTGCTCTCTGTTTCTTT+AGG - chr3.3:81627779-81627798 None:intergenic 35.0%
! CAATTTGTGGCCTTAAACAA+AGG + chr3.3:81625016-81625035 MS.gene013155:CDS 35.0%
! GACTGATTTCATATAGCATG+TGG - chr3.3:81625153-81625172 None:intergenic 35.0%
! TATCCCGCTATAGCATTTTT+GGG - chr3.3:81627237-81627256 None:intergenic 35.0%
! TGATTGGTTGAATTGTGTGT+CGG - chr3.3:81627401-81627420 None:intergenic 35.0%
! TTGTATAACATGGGTTCTGA+TGG + chr3.3:81629329-81629348 MS.gene013155:CDS 35.0%
! TTTAGATTGAGGTTTTCTCG+TGG + chr3.3:81628405-81628424 MS.gene013155:intron 35.0%
! TTTGAGAGAAATGCGTTTTG+GGG + chr3.3:81628040-81628059 MS.gene013155:intron 35.0%
!! AGAAGTAGGTGTTGCAATTT+TGG - chr3.3:81624842-81624861 None:intergenic 35.0%
!! CCTATAAGTAGTCATTTTCG+TGG - chr3.3:81627023-81627042 None:intergenic 35.0%
!! CGGGAATAACAGATTTTGAT+TGG - chr3.3:81627417-81627436 None:intergenic 35.0%
!! GAATTTGAAAGCACCTTCTT+GGG + chr3.3:81624639-81624658 MS.gene013155:CDS 35.0%
!! TAACAATAGCTTTGAGTCCA+TGG + chr3.3:81629259-81629278 MS.gene013155:CDS 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG + chr3.3:81627196-81627215 MS.gene013155:intron 35.0%
!!! TTTTGGGTTTGTAGATGAAG+TGG + chr3.3:81626339-81626358 MS.gene013155:intron 35.0%
AACACTCAATTGTGAGGTCT+CGG + chr3.3:81626379-81626398 MS.gene013155:intron 40.0%
AACTATCACTCTCTCCAAGT+TGG - chr3.3:81625449-81625468 None:intergenic 40.0%
AAGGCGCAAAGAATGAAAGA+AGG + chr3.3:81628074-81628093 MS.gene013155:intron 40.0%
AATTATAAAGCGGAACCTCC+AGG - chr3.3:81625699-81625718 None:intergenic 40.0%
ACAGTTTCTTGTCTTGTGGA+TGG + chr3.3:81624910-81624929 MS.gene013155:CDS 40.0%
ACTCCAGAGGTTACAATTTG+TGG + chr3.3:81625003-81625022 MS.gene013155:CDS 40.0%
ACTCTATCACCTTGCTCTAA+TGG - chr3.3:81627108-81627127 None:intergenic 40.0%
AGAAACAGAGAGCAGAATAG+AGG + chr3.3:81627781-81627800 MS.gene013155:intron 40.0%
AGAACCCATGTTATACAACG+AGG - chr3.3:81629327-81629346 None:intergenic 40.0%
AGCCAACATGAACAATGGAA+TGG - chr3.3:81625587-81625606 None:intergenic 40.0%
AGCGAATGAAACCTACATGA+AGG - chr3.3:81626107-81626126 None:intergenic 40.0%
AGCTGTAGGAAACGTTTAGA+TGG + chr3.3:81626152-81626171 MS.gene013155:CDS 40.0%
ATGGAAGCTAACATGAACAG+TGG - chr3.3:81625568-81625587 None:intergenic 40.0%
CAGTTTCTTGTCTTGTGGAT+GGG + chr3.3:81624911-81624930 MS.gene013155:CDS 40.0%
CATGGCAGTAGAACTTGAAA+AGG - chr3.3:81628853-81628872 None:intergenic 40.0%
CTCATTACTTCCTGTGAAAG+TGG + chr3.3:81628897-81628916 MS.gene013155:CDS 40.0%
CTCTCAACACATAAGAAACC+TGG + chr3.3:81625678-81625697 MS.gene013155:intron 40.0%
GAAGATCCTGAAGAAGAAGT+AGG - chr3.3:81624856-81624875 None:intergenic 40.0%
GAAGTTACAAAGCTGAGGAA+TGG + chr3.3:81627941-81627960 MS.gene013155:intron 40.0%
GACGTCAACTCTTAGACAAA+TGG + chr3.3:81627141-81627160 MS.gene013155:intron 40.0%
GCATCATTAGACAAAGGAAG+TGG - chr3.3:81624808-81624827 None:intergenic 40.0%
GCTAACATGAACAGTGGATA+AGG - chr3.3:81625562-81625581 None:intergenic 40.0%
GGCTAATAAGGAACATGCTT+AGG - chr3.3:81628719-81628738 None:intergenic 40.0%
GTATGTTTGTGGGGATCTTT+AGG - chr3.3:81626510-81626529 None:intergenic 40.0%
GTCAAGAAGTTACAAAGCTG+AGG + chr3.3:81627936-81627955 MS.gene013155:intron 40.0%
GTTGTCACAGACTAGTAACA+TGG - chr3.3:81626046-81626065 None:intergenic 40.0%
TATAGAAGAGAGCAAACACG+AGG + chr3.3:81627914-81627933 MS.gene013155:intron 40.0%
TATCAACCACATGAACTTGC+TGG - chr3.3:81628947-81628966 None:intergenic 40.0%
TATCTCATAACTCTACGCCA+TGG + chr3.3:81628252-81628271 MS.gene013155:intron 40.0%
TCAACACATAAGAAACCTGG+AGG + chr3.3:81625681-81625700 MS.gene013155:intron 40.0%
TCCAATTACCAAGGTAAGGT+TGG + chr3.3:81626239-81626258 MS.gene013155:intron 40.0%
TCTGTTATTCCCGGAAAACA+CGG + chr3.3:81627424-81627443 MS.gene013155:intron 40.0%
TTACTTATAAATGTGGCCCG+AGG - chr3.3:81625277-81625296 None:intergenic 40.0%
TTCATGTAGGTTTCATTCGC+TGG + chr3.3:81626106-81626125 MS.gene013155:intron 40.0%
TTGACGTGTTAATTCGTGAC+TGG + chr3.3:81625873-81625892 MS.gene013155:intron 40.0%
TTGGACAAAAAACTACCAGC+AGG - chr3.3:81626224-81626243 None:intergenic 40.0%
! AAAGCACCTTCTTGGGATTT+GGG + chr3.3:81624646-81624665 MS.gene013155:CDS 40.0%
! AAGTTGTTTCCCTTCTTCGT+AGG - chr3.3:81629003-81629022 None:intergenic 40.0%
! ACCAACCTTACCTTGGTAAT+TGG - chr3.3:81626243-81626262 None:intergenic 40.0%
! ACCTTCCGAGTCAATTTTGT+AGG + chr3.3:81628557-81628576 MS.gene013155:intron 40.0%
! ATCCCGCTATAGCATTTTTG+GGG - chr3.3:81627236-81627255 None:intergenic 40.0%
! ATTACCAAGGTAAGGTTGGT+TGG + chr3.3:81626243-81626262 MS.gene013155:intron 40.0%
! ATTTGAAGCTTGGTCAGGTT+GGG + chr3.3:81624761-81624780 MS.gene013155:CDS 40.0%
! CTATCCCGCTATAGCATTTT+TGG - chr3.3:81627238-81627257 None:intergenic 40.0%
! GATTGGTTGAATTGTGTGTC+GGG - chr3.3:81627400-81627419 None:intergenic 40.0%
! GCTGTGGTTTTCTTCTTCTT+CGG - chr3.3:81626184-81626203 None:intergenic 40.0%
! GTTGGCAGAACCTTTGTTTA+AGG - chr3.3:81625029-81625048 None:intergenic 40.0%
! TTGCTACTTGTCCTAAGAAG+AGG - chr3.3:81629077-81629096 None:intergenic 40.0%
!! AATAGCTTTGAGTCCATGGA+AGG + chr3.3:81629263-81629282 MS.gene013155:CDS 40.0%
!! ACTTCATTCTAAGACTCCAG+AGG + chr3.3:81624990-81625009 MS.gene013155:CDS 40.0%
!! GGAATTTGAAAGCACCTTCT+TGG + chr3.3:81624638-81624657 MS.gene013155:CDS 40.0%
!! TATTAGGTAGGAGAGCATCA+TGG - chr3.3:81628376-81628395 None:intergenic 40.0%
!! TCCTACAAAATTGACTCGGA+AGG - chr3.3:81628561-81628580 None:intergenic 40.0%
!! TGTTGATTTGAAGCTTGGTC+AGG + chr3.3:81624756-81624775 MS.gene013155:CDS 40.0%
!!! CTTTTCAAGTTCTACTGCCA+TGG + chr3.3:81628851-81628870 MS.gene013155:CDS 40.0%
!!! TTTTGGGGTGAGAAGATGAA+AGG + chr3.3:81628055-81628074 MS.gene013155:intron 40.0%
AAAGGGCTACCATTAGAGCA+AGG + chr3.3:81627096-81627115 MS.gene013155:intron 45.0%
AACCGCTATGCAATAAGCCA+TGG - chr3.3:81628272-81628291 None:intergenic 45.0%
AACTTGAAAAGGGTAGCACC+TGG - chr3.3:81628842-81628861 None:intergenic 45.0%
AAGCACCTTCTTGGGATTTG+GGG + chr3.3:81624647-81624666 MS.gene013155:CDS 45.0%
AATGTCTCTTATGCAGCCCT+TGG + chr3.3:81629220-81629239 MS.gene013155:CDS 45.0%
ACACTCAATTGTGAGGTCTC+GGG + chr3.3:81626380-81626399 MS.gene013155:intron 45.0%
ACTCCAAGCTGAATTCACCA+TGG - chr3.3:81628871-81628890 None:intergenic 45.0%
ACTTGAAAAGGGTAGCACCT+GGG - chr3.3:81628841-81628860 None:intergenic 45.0%
ACTTGTCCTAAGAAGAGGTG+TGG - chr3.3:81629072-81629091 None:intergenic 45.0%
AGGAAGTGGTGATTGATCAG+TGG - chr3.3:81624794-81624813 None:intergenic 45.0%
AGGCCACAAATTGTAACCTC+TGG - chr3.3:81625009-81625028 None:intergenic 45.0%
AGTTAATAGCGGCGCTATAG+CGG - chr3.3:81628328-81628347 None:intergenic 45.0%
ATAGATGAGTGCGCCTGATT+TGG + chr3.3:81626590-81626609 MS.gene013155:intron 45.0%
ATGTCTCTTATGCAGCCCTT+GGG + chr3.3:81629221-81629240 MS.gene013155:CDS 45.0%
ATGTGATTACGCAATGCCCT+TGG + chr3.3:81626567-81626586 MS.gene013155:intron 45.0%
CGACCCCAAAAATGCTATAG+CGG + chr3.3:81627230-81627249 MS.gene013155:intron 45.0%
CGAGTTTGAACACAAACGCA+AGG - chr3.3:81626003-81626022 None:intergenic 45.0%
CTAACCAACCAACCTTACCT+TGG - chr3.3:81626250-81626269 None:intergenic 45.0%
GACCCCAAAAATGCTATAGC+GGG + chr3.3:81627231-81627250 MS.gene013155:intron 45.0%
GATCACTCTCACTCCCATTT+GGG - chr3.3:81629298-81629317 None:intergenic 45.0%
GCAACACCTACTTCTTCTTC+AGG + chr3.3:81624847-81624866 MS.gene013155:CDS 45.0%
GCGTTTGTGTTCAAACTCGA+TGG + chr3.3:81626004-81626023 MS.gene013155:intron 45.0%
GGCGTAGAGTTATGAGATAG+CGG - chr3.3:81628251-81628270 None:intergenic 45.0%
GTGAAGTCTACCACTTTCAC+AGG - chr3.3:81628910-81628929 None:intergenic 45.0%
GTGAATTCAGCTTGGAGTAG+CGG + chr3.3:81628873-81628892 MS.gene013155:CDS 45.0%
GTTACAAAGCTGAGGAATGG+CGG + chr3.3:81627944-81627963 MS.gene013155:intron 45.0%
TAATGGTAGCCCTTTCCTCT+TGG - chr3.3:81627091-81627110 None:intergenic 45.0%
TGATCACTCTCACTCCCATT+TGG - chr3.3:81629299-81629318 None:intergenic 45.0%
TGGCTTATTGCATAGCGGTT+CGG + chr3.3:81628272-81628291 MS.gene013155:intron 45.0%
TGTCTAAGAGTTGACGTCCA+CGG - chr3.3:81627139-81627158 None:intergenic 45.0%
TTGTTTCCCTTCTTCGTAGG+TGG - chr3.3:81629000-81629019 None:intergenic 45.0%
! ATCTTGACTGCCGTGTTTTC+CGG - chr3.3:81627437-81627456 None:intergenic 45.0%
! ATGGGTTCTGATGGATCACA+AGG + chr3.3:81629338-81629357 MS.gene013155:CDS 45.0%
! GATTTGAAGCTTGGTCAGGT+TGG + chr3.3:81624760-81624779 MS.gene013155:CDS 45.0%
! GTATGGTGTTGAACACGAGT+TGG + chr3.3:81625769-81625788 MS.gene013155:intron 45.0%
! GTGGTTTGGCTATGAAGTGA+GGG - chr3.3:81629053-81629072 None:intergenic 45.0%
! TCCTAAGAAGAGGTGTGGTT+TGG - chr3.3:81629067-81629086 None:intergenic 45.0%
! TGTGGTTTGGCTATGAAGTG+AGG - chr3.3:81629054-81629073 None:intergenic 45.0%
!! AAGGAGTGTTGGTCCCAAAT+GGG + chr3.3:81629282-81629301 MS.gene013155:CDS 45.0%
!! ACTTCGGGAAGCTTTTTCTC+TGG - chr3.3:81627374-81627393 None:intergenic 45.0%
!! CGTGGACTTCAGTCATTTTG+CGG + chr3.3:81628423-81628442 MS.gene013155:intron 45.0%
!! GAAAGCACCTTCTTGGGATT+TGG + chr3.3:81624645-81624664 MS.gene013155:CDS 45.0%
!! TGTTGAACACGAGTTGGTGT+CGG + chr3.3:81625775-81625794 MS.gene013155:intron 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG - chr3.3:81627232-81627251 None:intergenic 45.0%
!!! CTATACTTTTTCAGGCACCC+AGG + chr3.3:81628821-81628840 MS.gene013155:intron 45.0%
!! CAATAATATTATTATATTAA+TGG - chr3.3:81626655-81626674 None:intergenic 5.0%
!! CATTAATATAATAATATTAT+TGG + chr3.3:81626653-81626672 MS.gene013155:intron 5.0%
!! TTAATTTCAAATTTAAATAT+AGG - chr3.3:81625090-81625109 None:intergenic 5.0%
!!! AGATTTTATTTTATTTTTTT+TGG + chr3.3:81627453-81627472 MS.gene013155:intron 5.0%
ACTGCAACCACCTACGAAGA+AGG + chr3.3:81628990-81629009 MS.gene013155:CDS 50.0%
AGATGAGTGAAACCGCCAAG+AGG + chr3.3:81627073-81627092 MS.gene013155:intron 50.0%
AGCACCTTCTTGGGATTTGG+GGG + chr3.3:81624648-81624667 MS.gene013155:CDS 50.0%
AGGCGCACTCATCTATCCAA+GGG - chr3.3:81626586-81626605 None:intergenic 50.0%
AGTGAAACCGCCAAGAGGAA+AGG + chr3.3:81627078-81627097 MS.gene013155:intron 50.0%
ATACCCCCCAAATCCCAAGA+AGG - chr3.3:81624655-81624674 None:intergenic 50.0%
CAGACGCACACACCTGATAA+TGG + chr3.3:81629167-81629186 MS.gene013155:CDS 50.0%
CCAACACCAGCAAGTTCATG+TGG + chr3.3:81628938-81628957 MS.gene013155:CDS 50.0%
CGCCATGGCTTATTGCATAG+CGG + chr3.3:81628267-81628286 MS.gene013155:intron 50.0%
CTGCAACCACCTACGAAGAA+GGG + chr3.3:81628991-81629010 MS.gene013155:CDS 50.0%
CTGCCATGGTGAATTCAGCT+TGG + chr3.3:81628865-81628884 MS.gene013155:CDS 50.0%
GAAATAGCGGTCATAGCGCT+AGG - chr3.3:81627263-81627282 None:intergenic 50.0%
GAAGCTGATCACGACTGACT+TGG - chr3.3:81627524-81627543 None:intergenic 50.0%
GAGCGCGACAGAGACATAAA+TGG - chr3.3:81626617-81626636 None:intergenic 50.0%
GCCAAACCACACCTCTTCTT+AGG + chr3.3:81629063-81629082 MS.gene013155:CDS 50.0%
GTGAAACCGCCAAGAGGAAA+GGG + chr3.3:81627079-81627098 MS.gene013155:intron 50.0%
TCGCGCTCATGGCAATCTAA+TGG + chr3.3:81626629-81626648 MS.gene013155:intron 50.0%
TTATGTCTCTGTCGCGCTCA+TGG + chr3.3:81626618-81626637 MS.gene013155:intron 50.0%
! ATGAGATAGCGGCGCAATAG+CGG - chr3.3:81628240-81628259 None:intergenic 50.0%
! GACAGAAGAGAGAGAGCACA+AGG - chr3.3:81629140-81629159 None:intergenic 50.0%
! GGATTTGGGGGGTATAGAAG+AGG + chr3.3:81624660-81624679 MS.gene013155:CDS 50.0%
! TCTTGACTGCCGTGTTTTCC+GGG - chr3.3:81627436-81627455 None:intergenic 50.0%
! TGAGTCCATGGAAGGAGTGT+TGG + chr3.3:81629271-81629290 MS.gene013155:CDS 50.0%
!! ATTGTGTGTCGGGAGCACTT+CGG - chr3.3:81627390-81627409 None:intergenic 50.0%
!! CCACATGAACTTGCTGGTGT+TGG - chr3.3:81628941-81628960 None:intergenic 50.0%
!! GAACTTGCTGGTGTTGGTTG+TGG - chr3.3:81628935-81628954 None:intergenic 50.0%
!! GAAGGAGTGTTGGTCCCAAA+TGG + chr3.3:81629281-81629300 MS.gene013155:CDS 50.0%
ACAAAGCTGAGGAATGGCGG+CGG + chr3.3:81627947-81627966 MS.gene013155:intron 55.0%
ACCATGCAGACTCAGTCCCA+AGG - chr3.3:81629240-81629259 None:intergenic 55.0%
CAGGCGCACTCATCTATCCA+AGG - chr3.3:81626587-81626606 None:intergenic 55.0%
CCATGCAGACTCAGTCCCAA+GGG - chr3.3:81629239-81629258 None:intergenic 55.0%
CTAAGAGTTGACGTCCACGG+CGG - chr3.3:81627136-81627155 None:intergenic 55.0%
GCACCTTCTTGGGATTTGGG+GGG + chr3.3:81624649-81624668 MS.gene013155:CDS 55.0%
GGTTCTGCCAACAGTGTAGC+AGG + chr3.3:81625037-81625056 MS.gene013155:CDS 55.0%
TAAGGAACGACGGCGGATGA+CGG + chr3.3:81627970-81627989 MS.gene013155:intron 55.0%
TGATAGAGTGAAAGCCGCCG+TGG + chr3.3:81627119-81627138 MS.gene013155:intron 55.0%
TGGGACCAACACTCCTTCCA+TGG - chr3.3:81629279-81629298 None:intergenic 55.0%
TGGTAGCCCTTTCCTCTTGG+CGG - chr3.3:81627088-81627107 None:intergenic 55.0%
! CATGTGTGTCGGCGTCATGT+TGG - chr3.3:81625804-81625823 None:intergenic 55.0%
!! TTGTGTGTCGGGAGCACTTC+GGG - chr3.3:81627389-81627408 None:intergenic 55.0%
ATGGCGGCGGTAAGGAACGA+CGG + chr3.3:81627960-81627979 MS.gene013155:intron 60.0%
CCCTTGGGACTGAGTCTGCA+TGG + chr3.3:81629236-81629255 MS.gene013155:CDS 60.0%
CGCGTGATAGGTTCAGGCTG+TGG - chr3.3:81626200-81626219 None:intergenic 60.0%
CTACCAGCAGGTCGCGTGAT+AGG - chr3.3:81626212-81626231 None:intergenic 60.0%
GAACCTATCACGCGACCTGC+TGG + chr3.3:81626206-81626225 MS.gene013155:CDS 60.0%
GCAGGTCGCGTGATAGGTTC+AGG - chr3.3:81626206-81626225 None:intergenic 60.0%
GCGGCTGCAACACTGCATAG+CGG - chr3.3:81628221-81628240 None:intergenic 60.0%
GGCGCTATAGCGGCCAATAG+CGG - chr3.3:81628318-81628337 None:intergenic 60.0%
GCTGAGGAATGGCGGCGGTA+AGG + chr3.3:81627952-81627971 MS.gene013155:intron 65.0%
! GGTGCGACGGCGGCGTTTTA+CGG + chr3.3:81627991-81628010 MS.gene013155:intron 65.0%
! TAGCGGATAGCGGCGCGTAG+CGG + chr3.3:81627206-81627225 MS.gene013155:intron 65.0%
GCGGCGGTAAGGAACGACGG+CGG + chr3.3:81627963-81627982 MS.gene013155:intron 70.0%
! GACGGCGGATGACGGTGCGA+CGG + chr3.3:81627978-81627997 MS.gene013155:intron 70.0%
AGCGGCCAATAGCGGCCGCG+CGG - chr3.3:81628310-81628329 None:intergenic 75.0%
CCAATAGCGGCCGCGCGGTG+CGG - chr3.3:81628305-81628324 None:intergenic 75.0%
! GGCGGATGACGGTGCGACGG+CGG + chr3.3:81627981-81628000 MS.gene013155:intron 75.0%
! CCGCACCGCGCGGCCGCTAT+TGG + chr3.3:81628302-81628321 MS.gene013155:intron 80.0%
! CGGTACCGCACCGCACCGCG+CGG + chr3.3:81628292-81628311 MS.gene013155:intron 80.0%
! AGCGGCCGCGCGGTGCGGTG+CGG - chr3.3:81628300-81628319 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 81624631 81629400 81624631 ID=MS.gene013155
chr3.3 mRNA 81624631 81629400 81624631 ID=MS.gene013155.t1;Parent=MS.gene013155
chr3.3 exon 81624631 81625058 81624631 ID=MS.gene013155.t1.exon1;Parent=MS.gene013155.t1
chr3.3 CDS 81624631 81625058 81624631 ID=cds.MS.gene013155.t1;Parent=MS.gene013155.t1
chr3.3 exon 81626115 81626251 81626115 ID=MS.gene013155.t1.exon2;Parent=MS.gene013155.t1
chr3.3 CDS 81626115 81626251 81626115 ID=cds.MS.gene013155.t1;Parent=MS.gene013155.t1
chr3.3 exon 81628835 81629400 81628835 ID=MS.gene013155.t1.exon3;Parent=MS.gene013155.t1
chr3.3 CDS 81628835 81629400 81628835 ID=cds.MS.gene013155.t1;Parent=MS.gene013155.t1
Gene Sequence

>MS.gene013155

ATGGAGTGGAATTTGAAAGCACCTTCTTGGGATTTGGGGGGTATAGAAGAGGCAACATTACCCAACATAGAAACAATGGAAGAATCAAACAGATTTGGAGTTTATAAAATGAAAGGGGAGTTTTCTGTTGATTTGAAGCTTGGTCAGGTTGGGAACTCTGCCACTGATCAATCACCACTTCCTTTGTCTAATGATGCTGTTGTTGTCTCCAAAATTGCAACACCTACTTCTTCTTCAGGATCTTCTAAGAGAGCTAGAGCTATGAATAATGCAACATTGACAGTTTCTTGTCTTGTGGATGGGTGCAATTCTGATCTTAGTAATTGTAGAGATTATCATAGGCGTCATAAGGTTTGTGAACTTCATTCTAAGACTCCAGAGGTTACAATTTGTGGCCTTAAACAAAGGTTCTGCCAACAGTGTAGCAGGTATATATGCATCATCAGTATATCATATCCTATATTTAAATTTGAAATTAACGATTAATTTAATCCCTAAGCTATAAAATATAACAGATGCCCACATGCTATATGAAATCAGTCAATTTATTCTCTAAAGTAAACGAAAATCCGTCAAATTAATCTCTAAAATTTTAATAGTGATGACTAAATTGACAGATCTTATATATGTTTAATGACTACTTCCTCGGGCCACATTTATAAGTAAATATTGTTTTTTCAGATTTATTGAATAACCGATATATCTAGACTATAATATTATCCGATAAATCAGTTATTTAATAAATCTAAAAGAGGAATAGTTGTTTATAAATGTGACCAGAGGGAATAGTTACTATATCGAACATAAGTTATGAACCAACTTGGAGAGAGTGATAGTTAAGAAACAAAATTTATGTGCATTTCTAAAATAGTTCTAGATTGTTTGTAATTTCTTCTGTTAGTTTGTATATGCATTTATGGATTTGAATCCTTATCCACTGTTCATGTTAGCTTCCATTCCATTGTTCATGTTGGCTTCATAAGTACTATTGTTTGCTATACCTTTAGCATCTTAATTACCTTTCTTTATTCTTTAACCAAAAAGAATCTCTCAACACATAAGAAACCTGGAGGTTCCGCTTTATAATTTTATTCTATCATACAAACTATACAACACCGACATTTCAGATTGAAAGTGTGTATGGTGTTGAACACGAGTTGGTGTCGGACACCAACATGACGCCGACACACATGCTTACATAATTACATTTAGTTATAAGGTTCTCTCAAATTAACATCGACGTTGACGTGTTAATTCGTGACTGGTGTCTATAAATTTTTCATATGCATGCAAGTTTCATGCAGAAAACATAGTTTAATTATATGGTTTCTTTTAAAATTAATGTTCTTTAAGTTATAGTCTTATAGATCCTTGCGTTTGTGTTCAAACTCGATGGATCTCACATTCTTACACCATGTTACTAGTCTGTGACAACATGATAGTTGAAGTTCCTCAAGTCCTGAATCTTAATTTCCTTCATGTAGGTTTCATTCGCTGGAGCAATTTGATGAAAGAAAAAGAAGCTGTAGGAAACGTTTAGATGGACACAACCGAAGAAGAAGAAAACCACAGCCTGAACCTATCACGCGACCTGCTGGTAGTTTTTTGTCCAATTACCAAGGTAAGGTTGGTTGGTTAGCTTCTAGTTTAGTTATTTCAACCACATTGTTTATCTTGAGTGGACCCATTTGCATACATTGCCTAGATATTTTGGGTTTGTAGATGAAGTGGTAAACTCCATTAAGACTAACACTCAATTGTGAGGTCTCGGGTTTTAAATTTAGATGAAGGTGTTGAACCTAATAATTTCAGCATTATCGGTTGAAGTAGACTTTACCAACTATATATGCCTAGATATGAATTGATGCATGCGTTGCCTAAAGATCCCCACAAACATACGGAAATATATACTTATATCAGATGAGTAGGAAGCTTCATGTGATTACGCAATGCCCTTGGATAGATGAGTGCGCCTGATTTGGTCCATTTATGTCTCTGTCGCGCTCATGGCAATCTAATGGCCATTAATATAATAATATTATTGGTAGGGTACACATACCAAACAAAAAGAGTTTGCTTCACGACCAATGTTTTTTAAGAGAAATTGTCCTTTCATGCGATTAATTAATCTTCAAACTCGCATTCAAAAGCATGTTCCACCGTAACTTTATAGAAGCTTCAAATTCAGGCTTTTGTTTCAACCTGATATTTCATCGAGATTTTGGTGAAGTTGCTGCACAGTTATGAGACTCTCTCACGTAGTCACGTATATAAGCAAAAGGTATTTGAAAAGTTGATGTATGTGGTTAAATAGGGAGTAATTAACTAATCGGGTTAGACTCTTTCATAGTCTTAAATCCCAACATTTAATGCTTTCATTGGGAGTTGGCCACGAAAATGACTACTTATAGGCTGGATTAAGGTACTCCATCGATTACTTAAAGATGAGTGAAACCGCCAAGAGGAAAGGGCTACCATTAGAGCAAGGTGATAGAGTGAAAGCCGCCGTGGACGTCAACTCTTAGACAAATGGCAATGTTGGGAGTCCCACGTAGAATAAATGCATAGTAGTTAATAGCGGATAGCGGCGCGTAGCGGCCGACCCCAAAAATGCTATAGCGGGATAGCGCCTAGCGCTATGACCGCTATTTCATAATTTTTAGGACAAATTATATAAATAATACTATAAATTATAGACAAACATATATCTAATATAAAATTAAACAGCAGTGCTATATATCCAGAGAAAAAGCTTCCCGAAGTGCTCCCGACACACAATTCAACCAATCAAAATCTGTTATTCCCGGAAAACACGGCAGTCAAGATTTTATTTTATTTTTTTTGGAAGAAGTCCATCAAATAAATATAACATCTAAAGGCTATTATATTGCCAAGTCAGTCGTGATCAGCTTCACGAAGTTTCCTTCGCTGTGTTTAGTATTATCGAAAATTAAATATAACATTCAAATCTCATGACACATTCATAAATCACACAAAGTTACAAACCACCTAAATCTTATGAAAGGTTTTACTCAAAATCATTCAAAGTTACAAACCACCAAAATTCAAAACATTACGAAAGCTTTCAAGTCTCCAACATAATATCAAAATTCAAAAGTCTTAACCAAAATTCAAAACATTAAATCCTAAAGAAACAGAGAGCAGAATAGAGGATGAACAAAACAGAGGATGTTTGTGATATGTTTACGAACAAGCAGAATAGAGTATGAACAAAACAGAGGATGTTTGTGATATGTTTATGAACAAAACAGAGAGGAAGATTTATAGAAGAGAGCAAACACGAGGTCAAGAAGTTACAAAGCTGAGGAATGGCGGCGGTAAGGAACGACGGCGGATGACGGTGCGACGGCGGCGTTTTACGGTGAGAAGATGTACAGATCGTCCGTTTTTTGAGAGAAATGCGTTTTGGGGTGAGAAGATGAAAGGCGCAAAGAATGAAAGAAGGAAGAGAGAAACTGAAGTTATTAGGGTTTGACGAAAATGACAAAAATACCCTTGTTTTTTTTTAAACCAAGGAGAATCTTGTATTTTCATGTAAAATGAAATAGCGGTGCTAGACTGCAAAACCGCTATGCAGTGTTGCAGCCGCTATTGCGCCGCTATCTCATAACTCTACGCCATGGCTTATTGCATAGCGGTTCGGTACCGCACCGCACCGCGCGGCCGCTATTGGCCGCTATAGCGCCGCTATTAACTACTCTGAATAAATGTACTATGTAAGCCATGATGCTCTCCTACCTAATAGACGAGACATTTAGATTGAGGTTTTCTCGTGGACTTCAGTCATTTTGCGGTGTTGTGTCTACCTAATTTCTAATTCATGTTATCCTTAAGGAAATAACTGATAGTGCAAATTGGACATGATATGACTTGAATTTTGTTTACGTAAGTGAAAGACATTGCACACCTTCCGAGTCAATTTTGTAGGATTGTGTTAGTCTCAACTCTCAACCCAAATTTTAAAACTATGACAGAATATTTAAGATATGTTAGGCTACCATCTATTTTATTACTCGTGAAAAAACATGTTCACAAGGCTTTGTAATATAATATGATGCATTAGGCCTAAGCATGTTCCTTATTAGCCATTAACAAAATAATGATATATTTGTTAATCATTCCATTAGTTTATTTAAAGTACAAGTAATTCAATGTCTAAAATTTTACTGCTATACTTTTTCAGGCACCCAGGTGCTACCCTTTTCAAGTTCTACTGCCATGGTGAATTCAGCTTGGAGTAGCGGACTCATTACTTCCTGTGAAAGTGGTAGACTTCACATCCACAACCAACACCAGCAAGTTCATGTGGTTGATAAACAAGATCATTTTCTTGGTTCTACTGCAACCACCTACGAAGAAGGGAAACAACTTCAATTCTTACACAATGACAACAACAATCCCTCACTTCATAGCCAAACCACACCTCTTCTTAGGACAAGTAGCAAAATGTTCTGTGATAGTTTAGCAACTTCAGTACACGAGTCACCTTGTGCTCTCTCTCTTCTGTCATCATCACAGACGCACACACCTGATAATGGTTTGAATCAAATGGTGCAGCAGCCTCATTCAATGTCTCTTATGCAGCCCTTGGGACTGAGTCTGCATGGTAACAATAGCTTTGAGTCCATGGAAGGAGTGTTGGTCCCAAATGGGAGTGAGAGTGATCATTGTTCCTCGTTGTATAACATGGGTTCTGATGGATCACAAGGCAATGATGCACCTCAACTATTTCCCTATCAATGGGAATAG
Protein sequence

>MS.gene013155.t1

MEWNLKAPSWDLGGIEEATLPNIETMEESNRFGVYKMKGEFSVDLKLGQVGNSATDQSPLPLSNDAVVVSKIATPTSSSGSSKRARAMNNATLTVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPEVTICGLKQRFCQQCSRFHSLEQFDERKRSCRKRLDGHNRRRRKPQPEPITRPAGSFLSNYQGTQVLPFSSSTAMVNSAWSSGLITSCESGRLHIHNQHQQVHVVDKQDHFLGSTATTYEEGKQLQFLHNDNNNPSLHSQTTPLLRTSSKMFCDSLATSVHESPCALSLLSSSQTHTPDNGLNQMVQQPHSMSLMQPLGLSLHGNNSFESMEGVLVPNGSESDHCSSLYNMGSDGSQGNDAPQLFPYQWE