Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013303.t1 | XP_003602629.1 | 94.7 | 208 | 9 | 2 | 1 | 206 | 1 | 208 | 2.80E-110 | 407.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013303.t1 | Q8GWK6 | 42.0 | 207 | 94 | 6 | 5 | 205 | 1 | 187 | 2.7e-37 | 156.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013303.t1 | G7JBM0 | 94.7 | 208 | 9 | 2 | 1 | 206 | 1 | 208 | 2.0e-110 | 407.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene013303.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013303.t1 | MTR_3g096400 | 94.712 | 208 | 9 | 2 | 1 | 206 | 1 | 208 | 6.62e-143 | 397 |
| MS.gene013303.t1 | MTR_8g093790 | 57.843 | 204 | 58 | 9 | 5 | 206 | 8 | 185 | 4.86e-65 | 199 |
| MS.gene013303.t1 | MTR_4g094302 | 42.500 | 200 | 94 | 6 | 7 | 205 | 11 | 190 | 1.65e-46 | 152 |
| MS.gene013303.t1 | MTR_4g094302 | 49.180 | 122 | 59 | 3 | 7 | 127 | 11 | 130 | 1.23e-37 | 128 |
| MS.gene013303.t1 | MTR_5g041940 | 32.864 | 213 | 119 | 7 | 5 | 201 | 1 | 205 | 8.34e-30 | 111 |
| MS.gene013303.t1 | MTR_4g081870 | 37.888 | 161 | 84 | 6 | 6 | 158 | 8 | 160 | 3.06e-27 | 104 |
| MS.gene013303.t1 | MTR_2g080010 | 36.810 | 163 | 90 | 5 | 7 | 158 | 15 | 175 | 5.20e-27 | 105 |
| MS.gene013303.t1 | MTR_7g100990 | 36.810 | 163 | 87 | 6 | 5 | 158 | 9 | 164 | 7.45e-26 | 102 |
| MS.gene013303.t1 | MTR_4g108760 | 40.373 | 161 | 76 | 7 | 7 | 158 | 17 | 166 | 1.34e-25 | 102 |
| MS.gene013303.t1 | MTR_4g089135 | 34.286 | 175 | 90 | 5 | 7 | 158 | 15 | 187 | 3.23e-25 | 100 |
| MS.gene013303.t1 | MTR_2157s0010 | 31.677 | 161 | 100 | 3 | 7 | 158 | 8 | 167 | 3.53e-25 | 99.4 |
| MS.gene013303.t1 | MTR_3g435150 | 37.654 | 162 | 87 | 4 | 3 | 158 | 12 | 165 | 4.59e-25 | 99.8 |
| MS.gene013303.t1 | MTR_3g109340 | 40.373 | 161 | 74 | 6 | 7 | 158 | 22 | 169 | 1.59e-24 | 99.0 |
| MS.gene013303.t1 | MTR_2g079990 | 33.125 | 160 | 91 | 3 | 5 | 158 | 14 | 163 | 5.06e-24 | 97.8 |
| MS.gene013303.t1 | MTR_2g093810 | 36.420 | 162 | 81 | 7 | 7 | 156 | 14 | 165 | 5.88e-24 | 97.1 |
| MS.gene013303.t1 | MTR_3g109340 | 39.130 | 161 | 77 | 6 | 7 | 158 | 22 | 170 | 6.00e-24 | 97.4 |
| MS.gene013303.t1 | MTR_3g098810 | 32.515 | 163 | 96 | 4 | 4 | 157 | 11 | 168 | 9.53e-24 | 94.7 |
| MS.gene013303.t1 | MTR_2g062730 | 32.317 | 164 | 89 | 5 | 5 | 158 | 8 | 159 | 1.39e-23 | 96.3 |
| MS.gene013303.t1 | MTR_3g088110 | 32.515 | 163 | 96 | 4 | 1 | 157 | 1 | 155 | 1.58e-23 | 95.1 |
| MS.gene013303.t1 | MTR_3g070030 | 35.795 | 176 | 95 | 6 | 5 | 172 | 17 | 182 | 1.83e-23 | 96.3 |
| MS.gene013303.t1 | MTR_8g094580 | 32.121 | 165 | 95 | 4 | 1 | 157 | 1 | 156 | 2.72e-23 | 94.7 |
| MS.gene013303.t1 | MTR_1g008740 | 40.000 | 165 | 71 | 8 | 7 | 158 | 27 | 176 | 3.17e-23 | 95.5 |
| MS.gene013303.t1 | MTR_1g008740 | 38.547 | 179 | 80 | 9 | 7 | 170 | 13 | 176 | 3.67e-23 | 95.1 |
| MS.gene013303.t1 | MTR_7g005280 | 35.185 | 162 | 80 | 5 | 5 | 157 | 13 | 158 | 5.74e-23 | 93.2 |
| MS.gene013303.t1 | MTR_6g084430 | 37.500 | 160 | 78 | 6 | 7 | 158 | 5 | 150 | 1.43e-22 | 93.2 |
| MS.gene013303.t1 | MTR_3g064580 | 32.022 | 178 | 104 | 4 | 5 | 174 | 4 | 172 | 1.76e-22 | 95.1 |
| MS.gene013303.t1 | MTR_8g059170 | 32.022 | 178 | 105 | 4 | 5 | 176 | 12 | 179 | 1.94e-22 | 93.2 |
| MS.gene013303.t1 | MTR_8g099750 | 30.625 | 160 | 98 | 4 | 4 | 156 | 11 | 164 | 7.97e-22 | 89.4 |
| MS.gene013303.t1 | MTR_2g079990 | 30.726 | 179 | 98 | 4 | 5 | 158 | 14 | 191 | 1.30e-21 | 91.3 |
| MS.gene013303.t1 | MTR_7g085220 | 32.370 | 173 | 94 | 7 | 5 | 161 | 6 | 171 | 1.63e-21 | 90.5 |
| MS.gene013303.t1 | MTR_4g035590 | 32.222 | 180 | 97 | 7 | 7 | 175 | 8 | 173 | 2.14e-21 | 90.5 |
| MS.gene013303.t1 | MTR_2g078700 | 36.646 | 161 | 84 | 6 | 7 | 158 | 23 | 174 | 2.71e-21 | 90.5 |
| MS.gene013303.t1 | MTR_3g096920 | 31.447 | 159 | 95 | 4 | 5 | 157 | 5 | 155 | 3.83e-21 | 89.0 |
| MS.gene013303.t1 | MTR_2g064470 | 34.161 | 161 | 85 | 6 | 5 | 157 | 9 | 156 | 4.11e-21 | 89.0 |
| MS.gene013303.t1 | MTR_6g477900 | 36.641 | 131 | 74 | 3 | 5 | 127 | 4 | 133 | 6.32e-21 | 87.4 |
| MS.gene013303.t1 | MTR_8g024480 | 30.247 | 162 | 103 | 3 | 6 | 158 | 14 | 174 | 6.48e-21 | 89.7 |
| MS.gene013303.t1 | MTR_3g098810 | 34.307 | 137 | 79 | 3 | 4 | 131 | 11 | 145 | 8.89e-21 | 85.5 |
| MS.gene013303.t1 | MTR_7g085260 | 31.132 | 212 | 127 | 5 | 7 | 206 | 17 | 221 | 1.09e-20 | 89.0 |
| MS.gene013303.t1 | MTR_5g076850 | 32.787 | 183 | 105 | 5 | 5 | 179 | 4 | 176 | 1.40e-20 | 89.4 |
| MS.gene013303.t1 | MTR_8g467490 | 31.214 | 173 | 105 | 5 | 9 | 171 | 16 | 184 | 1.72e-20 | 88.6 |
| MS.gene013303.t1 | MTR_5g012080 | 29.341 | 167 | 99 | 4 | 1 | 158 | 1 | 157 | 2.37e-20 | 87.4 |
| MS.gene013303.t1 | MTR_1g069805 | 29.714 | 175 | 98 | 4 | 5 | 167 | 8 | 169 | 5.49e-20 | 85.5 |
| MS.gene013303.t1 | MTR_3g096140 | 30.846 | 201 | 115 | 8 | 1 | 189 | 1 | 189 | 8.57e-20 | 85.1 |
| MS.gene013303.t1 | MTR_8g093580 | 34.146 | 164 | 88 | 5 | 4 | 158 | 3 | 155 | 2.57e-19 | 85.5 |
| MS.gene013303.t1 | MTR_3g096140 | 30.846 | 201 | 115 | 8 | 1 | 189 | 1 | 189 | 2.58e-19 | 84.7 |
| MS.gene013303.t1 | MTR_4g101680 | 31.319 | 182 | 102 | 6 | 1 | 173 | 1 | 168 | 3.01e-19 | 84.7 |
| MS.gene013303.t1 | MTR_3g070040 | 33.140 | 172 | 102 | 4 | 5 | 171 | 6 | 169 | 3.91e-19 | 84.0 |
| MS.gene013303.t1 | MTR_7g097090 | 30.675 | 163 | 87 | 4 | 5 | 157 | 8 | 154 | 4.85e-19 | 83.2 |
| MS.gene013303.t1 | MTR_6g011860 | 29.114 | 158 | 106 | 1 | 7 | 158 | 15 | 172 | 1.12e-18 | 83.2 |
| MS.gene013303.t1 | MTR_2g064090 | 29.630 | 162 | 97 | 3 | 5 | 158 | 4 | 156 | 1.33e-18 | 82.8 |
| MS.gene013303.t1 | MTR_7g011120 | 32.530 | 166 | 93 | 4 | 5 | 158 | 6 | 164 | 1.33e-18 | 82.4 |
| MS.gene013303.t1 | MTR_6g012670 | 32.704 | 159 | 93 | 4 | 6 | 158 | 19 | 169 | 1.92e-18 | 82.0 |
| MS.gene013303.t1 | MTR_4g036030 | 30.178 | 169 | 93 | 6 | 1 | 158 | 1 | 155 | 2.37e-18 | 82.0 |
| MS.gene013303.t1 | MTR_5g040420 | 31.214 | 173 | 104 | 6 | 9 | 171 | 16 | 183 | 2.68e-18 | 82.4 |
| MS.gene013303.t1 | MTR_1g090720 | 32.353 | 170 | 102 | 5 | 7 | 168 | 42 | 206 | 3.89e-18 | 82.0 |
| MS.gene013303.t1 | MTR_1g096430 | 29.012 | 162 | 92 | 6 | 7 | 158 | 7 | 155 | 6.90e-18 | 80.9 |
| MS.gene013303.t1 | MTR_2g086690 | 31.395 | 172 | 95 | 7 | 1 | 159 | 1 | 162 | 8.76e-18 | 79.3 |
| MS.gene013303.t1 | MTR_2g068880 | 29.878 | 164 | 99 | 5 | 9 | 158 | 24 | 185 | 9.44e-18 | 80.1 |
| MS.gene013303.t1 | MTR_5g014300 | 27.835 | 194 | 114 | 3 | 5 | 184 | 4 | 185 | 1.22e-17 | 80.1 |
| MS.gene013303.t1 | MTR_8g063550 | 33.742 | 163 | 90 | 5 | 4 | 158 | 3 | 155 | 1.29e-17 | 80.5 |
| MS.gene013303.t1 | MTR_3g093050 | 33.750 | 160 | 88 | 4 | 7 | 158 | 22 | 171 | 1.43e-17 | 80.5 |
| MS.gene013303.t1 | MTR_8g023930 | 36.154 | 130 | 72 | 4 | 7 | 126 | 24 | 152 | 1.49e-17 | 80.5 |
| MS.gene013303.t1 | MTR_2g086880 | 32.540 | 126 | 77 | 2 | 9 | 127 | 20 | 144 | 1.53e-17 | 80.5 |
| MS.gene013303.t1 | MTR_3g116070 | 35.252 | 139 | 82 | 3 | 7 | 137 | 23 | 161 | 1.54e-17 | 79.7 |
| MS.gene013303.t1 | MTR_8g063550 | 31.795 | 195 | 108 | 8 | 4 | 184 | 3 | 186 | 1.66e-17 | 79.7 |
| MS.gene013303.t1 | MTR_2g086880 | 32.540 | 126 | 77 | 2 | 9 | 127 | 20 | 144 | 1.78e-17 | 80.5 |
| MS.gene013303.t1 | MTR_3g093050 | 33.750 | 160 | 88 | 4 | 7 | 158 | 22 | 171 | 1.90e-17 | 80.5 |
| MS.gene013303.t1 | MTR_7g011130 | 28.378 | 222 | 131 | 5 | 5 | 205 | 17 | 231 | 2.19e-17 | 79.3 |
| MS.gene013303.t1 | MTR_5g069030 | 32.919 | 161 | 90 | 5 | 6 | 158 | 24 | 174 | 2.27e-17 | 80.1 |
| MS.gene013303.t1 | MTR_8g063550 | 31.795 | 195 | 108 | 8 | 4 | 184 | 3 | 186 | 2.47e-17 | 79.7 |
| MS.gene013303.t1 | MTR_4g052620 | 30.000 | 170 | 100 | 5 | 1 | 159 | 1 | 162 | 2.62e-17 | 78.2 |
| MS.gene013303.t1 | MTR_2g068920 | 29.193 | 161 | 100 | 4 | 9 | 156 | 23 | 182 | 2.79e-17 | 78.6 |
| MS.gene013303.t1 | MTR_5g090970 | 27.673 | 159 | 105 | 4 | 9 | 158 | 20 | 177 | 3.63e-17 | 78.6 |
| MS.gene013303.t1 | MTR_8g023840 | 33.129 | 163 | 78 | 8 | 7 | 156 | 11 | 155 | 6.05e-17 | 78.6 |
| MS.gene013303.t1 | MTR_5g021710 | 28.221 | 163 | 92 | 6 | 7 | 158 | 8 | 156 | 8.74e-17 | 77.8 |
| MS.gene013303.t1 | MTR_1g090723 | 31.250 | 160 | 89 | 7 | 9 | 158 | 10 | 158 | 1.08e-16 | 78.2 |
| MS.gene013303.t1 | MTR_3g096920 | 30.534 | 131 | 83 | 2 | 5 | 129 | 5 | 133 | 1.56e-16 | 76.6 |
| MS.gene013303.t1 | MTR_3g093040 | 31.288 | 163 | 94 | 4 | 4 | 158 | 105 | 257 | 1.66e-16 | 76.6 |
| MS.gene013303.t1 | MTR_8g076110 | 30.534 | 131 | 79 | 4 | 7 | 127 | 6 | 134 | 1.97e-16 | 76.3 |
| MS.gene013303.t1 | MTR_1g090723 | 30.000 | 160 | 90 | 6 | 9 | 158 | 10 | 157 | 2.71e-16 | 77.0 |
| MS.gene013303.t1 | MTR_1g090723 | 30.000 | 160 | 90 | 6 | 9 | 158 | 10 | 157 | 2.81e-16 | 77.0 |
| MS.gene013303.t1 | MTR_6g032770 | 33.594 | 128 | 78 | 2 | 7 | 127 | 18 | 145 | 3.43e-16 | 76.3 |
| MS.gene013303.t1 | MTR_4g098630 | 30.357 | 168 | 96 | 5 | 5 | 162 | 4 | 160 | 7.06e-16 | 74.7 |
| MS.gene013303.t1 | MTR_4g134460 | 30.128 | 156 | 92 | 3 | 9 | 158 | 56 | 200 | 7.12e-16 | 75.5 |
| MS.gene013303.t1 | MTR_8g023900 | 30.357 | 168 | 81 | 7 | 7 | 156 | 188 | 337 | 7.58e-16 | 75.5 |
| MS.gene013303.t1 | MTR_5g090970 | 28.571 | 161 | 100 | 6 | 9 | 158 | 20 | 176 | 9.55e-16 | 74.3 |
| MS.gene013303.t1 | MTR_0036s0150 | 30.435 | 161 | 88 | 7 | 9 | 158 | 7 | 154 | 1.40e-15 | 74.7 |
| MS.gene013303.t1 | MTR_1g097300 | 30.709 | 127 | 79 | 2 | 9 | 127 | 21 | 146 | 3.19e-13 | 68.2 |
| MS.gene013303.t1 | MTR_7g105170 | 24.762 | 210 | 130 | 7 | 7 | 195 | 4 | 206 | 6.68e-13 | 65.9 |
| MS.gene013303.t1 | MTR_3g096140 | 28.889 | 180 | 104 | 8 | 22 | 189 | 1 | 168 | 2.50e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013303.t1 | AT5G64530 | 42.995 | 207 | 92 | 6 | 5 | 205 | 1 | 187 | 3.41e-44 | 146 |
| MS.gene013303.t1 | AT5G64530 | 50.806 | 124 | 54 | 3 | 5 | 127 | 1 | 118 | 5.24e-35 | 121 |
| MS.gene013303.t1 | AT1G61110 | 36.257 | 171 | 94 | 4 | 7 | 165 | 16 | 183 | 3.50e-29 | 110 |
| MS.gene013303.t1 | AT2G24430 | 40.000 | 160 | 77 | 5 | 7 | 158 | 16 | 164 | 1.51e-26 | 103 |
| MS.gene013303.t1 | AT2G24430 | 40.000 | 160 | 77 | 5 | 7 | 158 | 16 | 164 | 1.51e-26 | 103 |
| MS.gene013303.t1 | AT1G01720 | 36.364 | 165 | 88 | 6 | 1 | 157 | 1 | 156 | 5.74e-26 | 101 |
| MS.gene013303.t1 | AT5G07680 | 39.623 | 159 | 78 | 6 | 7 | 157 | 3 | 151 | 7.77e-26 | 102 |
| MS.gene013303.t1 | AT5G07680 | 39.623 | 159 | 78 | 6 | 7 | 157 | 17 | 165 | 8.69e-26 | 102 |
| MS.gene013303.t1 | AT3G04070 | 35.976 | 164 | 89 | 5 | 7 | 158 | 10 | 169 | 5.70e-25 | 100 |
| MS.gene013303.t1 | AT3G04060 | 37.805 | 164 | 83 | 6 | 3 | 157 | 16 | 169 | 7.17e-25 | 99.8 |
| MS.gene013303.t1 | AT1G52890 | 33.750 | 160 | 90 | 3 | 5 | 158 | 12 | 161 | 1.85e-24 | 98.2 |
| MS.gene013303.t1 | AT1G69490 | 34.591 | 159 | 90 | 5 | 7 | 158 | 9 | 160 | 1.91e-24 | 97.4 |
| MS.gene013303.t1 | AT3G18400 | 38.750 | 160 | 77 | 5 | 7 | 158 | 5 | 151 | 2.79e-24 | 97.8 |
| MS.gene013303.t1 | AT3G04070 | 34.270 | 178 | 89 | 6 | 7 | 158 | 10 | 185 | 4.27e-24 | 98.2 |
| MS.gene013303.t1 | AT5G39610 | 35.366 | 164 | 84 | 4 | 5 | 158 | 18 | 169 | 4.47e-24 | 96.7 |
| MS.gene013303.t1 | AT1G77450 | 33.951 | 162 | 93 | 4 | 2 | 157 | 5 | 158 | 5.74e-24 | 95.9 |
| MS.gene013303.t1 | AT5G61430 | 37.107 | 159 | 84 | 5 | 7 | 158 | 16 | 165 | 7.82e-24 | 97.1 |
| MS.gene013303.t1 | AT4G27410 | 33.125 | 160 | 91 | 4 | 5 | 158 | 12 | 161 | 8.69e-24 | 96.3 |
| MS.gene013303.t1 | AT5G18270 | 36.196 | 163 | 87 | 5 | 3 | 157 | 17 | 170 | 1.57e-23 | 96.3 |
| MS.gene013303.t1 | AT5G08790 | 28.155 | 206 | 133 | 4 | 1 | 197 | 1 | 200 | 1.74e-23 | 95.1 |
| MS.gene013303.t1 | AT5G18270 | 35.583 | 163 | 88 | 5 | 3 | 157 | 17 | 170 | 2.67e-23 | 95.5 |
| MS.gene013303.t1 | AT3G15500 | 32.500 | 160 | 92 | 3 | 5 | 158 | 12 | 161 | 3.65e-23 | 94.7 |
| MS.gene013303.t1 | AT5G22290 | 36.029 | 136 | 79 | 3 | 9 | 137 | 23 | 157 | 8.66e-23 | 94.4 |
| MS.gene013303.t1 | AT5G46590 | 34.177 | 158 | 88 | 3 | 7 | 156 | 6 | 155 | 9.96e-23 | 93.2 |
| MS.gene013303.t1 | AT5G53950 | 37.349 | 166 | 86 | 6 | 2 | 158 | 12 | 168 | 1.75e-22 | 94.0 |
| MS.gene013303.t1 | AT3G15510 | 33.962 | 159 | 92 | 5 | 11 | 158 | 21 | 177 | 3.82e-22 | 92.8 |
| MS.gene013303.t1 | AT4G10350 | 31.000 | 200 | 112 | 7 | 7 | 191 | 9 | 197 | 4.30e-22 | 92.4 |
| MS.gene013303.t1 | AT3G61910 | 32.571 | 175 | 99 | 6 | 6 | 163 | 10 | 182 | 6.80e-22 | 91.7 |
| MS.gene013303.t1 | AT1G76420 | 37.423 | 163 | 75 | 7 | 7 | 157 | 22 | 169 | 1.30e-21 | 90.9 |
| MS.gene013303.t1 | AT3G10500 | 33.333 | 165 | 92 | 4 | 2 | 158 | 4 | 158 | 1.35e-21 | 92.4 |
| MS.gene013303.t1 | AT5G63790 | 32.164 | 171 | 100 | 5 | 1 | 163 | 44 | 206 | 1.45e-21 | 90.5 |
| MS.gene013303.t1 | AT5G63790 | 32.164 | 171 | 100 | 5 | 1 | 163 | 54 | 216 | 1.71e-21 | 90.5 |
| MS.gene013303.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene013303.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene013303.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene013303.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene013303.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene013303.t1 | AT3G44290 | 34.848 | 132 | 78 | 3 | 9 | 133 | 16 | 146 | 5.11e-21 | 87.4 |
| MS.gene013303.t1 | AT5G46590 | 36.154 | 130 | 75 | 2 | 7 | 128 | 6 | 135 | 6.87e-21 | 88.2 |
| MS.gene013303.t1 | AT3G12977 | 31.098 | 164 | 98 | 4 | 5 | 162 | 16 | 170 | 7.94e-21 | 87.8 |
| MS.gene013303.t1 | AT2G33480 | 34.783 | 161 | 84 | 6 | 4 | 157 | 12 | 158 | 9.22e-21 | 87.4 |
| MS.gene013303.t1 | AT5G04410 | 32.727 | 165 | 93 | 4 | 2 | 158 | 4 | 158 | 1.04e-20 | 89.7 |
| MS.gene013303.t1 | AT5G17260 | 32.716 | 162 | 92 | 3 | 5 | 158 | 4 | 156 | 1.04e-20 | 89.7 |
| MS.gene013303.t1 | AT4G27410 | 32.203 | 177 | 87 | 6 | 5 | 158 | 12 | 178 | 1.15e-20 | 88.2 |
| MS.gene013303.t1 | AT3G17730 | 35.878 | 131 | 75 | 3 | 5 | 127 | 4 | 133 | 1.48e-20 | 86.7 |
| MS.gene013303.t1 | AT2G46770 | 30.814 | 172 | 104 | 6 | 6 | 164 | 15 | 184 | 1.51e-20 | 88.2 |
| MS.gene013303.t1 | AT3G44290 | 34.848 | 132 | 78 | 3 | 9 | 133 | 16 | 146 | 1.88e-20 | 87.8 |
| MS.gene013303.t1 | AT5G13180 | 32.927 | 164 | 84 | 6 | 4 | 157 | 11 | 158 | 4.53e-20 | 85.5 |
| MS.gene013303.t1 | AT3G15170 | 35.669 | 157 | 87 | 4 | 7 | 156 | 20 | 169 | 4.84e-20 | 86.3 |
| MS.gene013303.t1 | AT1G33280 | 31.138 | 167 | 92 | 5 | 7 | 164 | 8 | 160 | 5.20e-20 | 86.3 |
| MS.gene013303.t1 | AT3G29035 | 40.458 | 131 | 67 | 4 | 5 | 127 | 22 | 149 | 7.15e-20 | 85.9 |
| MS.gene013303.t1 | AT4G35580 | 31.633 | 196 | 100 | 6 | 7 | 183 | 9 | 189 | 1.24e-19 | 86.7 |
| MS.gene013303.t1 | AT2G33480 | 34.161 | 161 | 83 | 6 | 4 | 157 | 12 | 156 | 1.30e-19 | 84.3 |
| MS.gene013303.t1 | AT4G35580 | 31.633 | 196 | 100 | 6 | 7 | 183 | 9 | 189 | 1.73e-19 | 86.3 |
| MS.gene013303.t1 | AT4G35580 | 31.633 | 196 | 100 | 6 | 7 | 183 | 9 | 189 | 1.75e-19 | 86.3 |
| MS.gene013303.t1 | AT1G32510 | 30.488 | 164 | 92 | 3 | 7 | 156 | 6 | 161 | 2.61e-19 | 84.0 |
| MS.gene013303.t1 | AT1G56010 | 31.677 | 161 | 94 | 5 | 5 | 157 | 17 | 169 | 2.68e-19 | 84.3 |
| MS.gene013303.t1 | AT1G65910 | 32.716 | 162 | 91 | 4 | 5 | 158 | 4 | 155 | 4.33e-19 | 85.1 |
| MS.gene013303.t1 | AT3G03200 | 30.864 | 162 | 95 | 3 | 5 | 158 | 4 | 156 | 5.14e-19 | 84.7 |
| MS.gene013303.t1 | AT1G32770 | 30.120 | 166 | 99 | 5 | 6 | 158 | 15 | 176 | 5.88e-19 | 84.0 |
| MS.gene013303.t1 | AT2G02450 | 28.421 | 190 | 115 | 3 | 9 | 188 | 53 | 231 | 6.64e-19 | 84.0 |
| MS.gene013303.t1 | AT1G12260 | 27.650 | 217 | 124 | 8 | 1 | 205 | 1 | 196 | 7.36e-19 | 83.6 |
| MS.gene013303.t1 | AT2G02450 | 28.421 | 190 | 115 | 3 | 9 | 188 | 53 | 231 | 9.61e-19 | 83.6 |
| MS.gene013303.t1 | AT5G62380 | 29.825 | 171 | 91 | 7 | 1 | 158 | 1 | 155 | 1.15e-18 | 83.2 |
| MS.gene013303.t1 | AT5G62380 | 29.825 | 171 | 91 | 7 | 1 | 158 | 1 | 155 | 1.15e-18 | 83.2 |
| MS.gene013303.t1 | AT1G12260 | 27.650 | 217 | 124 | 8 | 1 | 205 | 1 | 196 | 1.41e-18 | 83.2 |
| MS.gene013303.t1 | AT2G43000 | 28.205 | 156 | 97 | 3 | 9 | 158 | 20 | 166 | 1.81e-18 | 81.6 |
| MS.gene013303.t1 | AT5G24590 | 30.061 | 163 | 97 | 4 | 4 | 158 | 10 | 163 | 2.30e-18 | 82.8 |
| MS.gene013303.t1 | AT4G17980 | 32.727 | 165 | 93 | 5 | 7 | 162 | 6 | 161 | 2.59e-18 | 80.9 |
| MS.gene013303.t1 | AT1G52880 | 31.138 | 167 | 85 | 6 | 11 | 158 | 21 | 176 | 3.11e-18 | 81.6 |
| MS.gene013303.t1 | AT4G17980 | 32.704 | 159 | 91 | 4 | 7 | 156 | 6 | 157 | 3.42e-18 | 80.9 |
| MS.gene013303.t1 | AT1G33060 | 32.704 | 159 | 89 | 4 | 7 | 157 | 24 | 172 | 6.84e-18 | 81.6 |
| MS.gene013303.t1 | AT1G33060 | 32.704 | 159 | 89 | 4 | 7 | 157 | 24 | 172 | 7.12e-18 | 81.6 |
| MS.gene013303.t1 | AT2G27300 | 34.351 | 131 | 78 | 3 | 4 | 127 | 11 | 140 | 9.53e-18 | 80.5 |
| MS.gene013303.t1 | AT2G18060 | 29.012 | 162 | 92 | 6 | 7 | 158 | 9 | 157 | 1.14e-17 | 80.5 |
| MS.gene013303.t1 | AT2G18060 | 29.012 | 162 | 92 | 6 | 7 | 158 | 9 | 157 | 1.14e-17 | 80.5 |
| MS.gene013303.t1 | AT4G36160 | 28.395 | 162 | 93 | 5 | 7 | 158 | 14 | 162 | 1.94e-17 | 79.7 |
| MS.gene013303.t1 | AT4G36160 | 28.395 | 162 | 93 | 5 | 7 | 158 | 10 | 158 | 2.16e-17 | 79.7 |
| MS.gene013303.t1 | AT4G36160 | 28.395 | 162 | 93 | 5 | 7 | 158 | 10 | 158 | 2.16e-17 | 79.7 |
| MS.gene013303.t1 | AT4G28530 | 28.571 | 175 | 89 | 4 | 6 | 157 | 9 | 170 | 2.56e-17 | 79.3 |
| MS.gene013303.t1 | AT1G26870 | 30.247 | 162 | 100 | 4 | 7 | 158 | 16 | 174 | 3.53e-17 | 79.3 |
| MS.gene013303.t1 | AT5G22380 | 31.361 | 169 | 95 | 5 | 1 | 157 | 1 | 160 | 5.10e-17 | 77.0 |
| MS.gene013303.t1 | AT1G62700 | 29.167 | 168 | 96 | 6 | 1 | 158 | 1 | 155 | 6.75e-17 | 78.6 |
| MS.gene013303.t1 | AT1G62700 | 29.167 | 168 | 96 | 6 | 1 | 158 | 1 | 155 | 6.75e-17 | 78.6 |
| MS.gene013303.t1 | AT5G39820 | 28.177 | 181 | 109 | 6 | 9 | 169 | 22 | 201 | 1.35e-16 | 77.0 |
| MS.gene013303.t1 | AT1G71930 | 27.647 | 170 | 98 | 7 | 1 | 158 | 1 | 157 | 1.46e-16 | 77.0 |
| MS.gene013303.t1 | AT1G71930 | 27.647 | 170 | 98 | 7 | 1 | 158 | 1 | 157 | 1.46e-16 | 77.0 |
| MS.gene013303.t1 | AT1G54330 | 29.143 | 175 | 97 | 4 | 5 | 168 | 4 | 162 | 1.92e-16 | 76.3 |
| MS.gene013303.t1 | AT3G10480 | 32.759 | 174 | 97 | 6 | 7 | 172 | 27 | 188 | 2.05e-16 | 77.0 |
| MS.gene013303.t1 | AT3G12910 | 26.036 | 169 | 110 | 6 | 3 | 158 | 18 | 184 | 6.90e-16 | 74.7 |
| MS.gene013303.t1 | AT5G66300 | 27.778 | 162 | 95 | 6 | 7 | 158 | 12 | 161 | 7.89e-16 | 74.7 |
| MS.gene013303.t1 | AT1G32870 | 36.220 | 127 | 74 | 2 | 7 | 127 | 10 | 135 | 1.23e-15 | 75.1 |
| MS.gene013303.t1 | AT1G32870 | 36.220 | 127 | 74 | 2 | 7 | 127 | 10 | 135 | 1.27e-15 | 75.1 |
| MS.gene013303.t1 | AT5G04395 | 33.103 | 145 | 76 | 4 | 7 | 130 | 28 | 172 | 1.28e-15 | 72.0 |
| MS.gene013303.t1 | AT1G32870 | 36.220 | 127 | 74 | 2 | 7 | 127 | 46 | 171 | 1.71e-15 | 74.7 |
| MS.gene013303.t1 | AT3G49530 | 28.571 | 161 | 96 | 5 | 7 | 158 | 13 | 163 | 2.00e-15 | 74.3 |
| MS.gene013303.t1 | AT3G49530 | 28.571 | 161 | 96 | 5 | 7 | 158 | 13 | 163 | 3.17e-15 | 73.9 |
| MS.gene013303.t1 | AT3G10480 | 32.571 | 175 | 97 | 7 | 7 | 172 | 27 | 189 | 4.10e-15 | 73.6 |
| MS.gene013303.t1 | AT1G34190 | 32.283 | 127 | 77 | 2 | 9 | 127 | 18 | 143 | 7.54e-15 | 72.8 |
| MS.gene013303.t1 | AT1G02230 | 32.090 | 134 | 76 | 4 | 8 | 129 | 4 | 134 | 1.02e-14 | 72.0 |
| MS.gene013303.t1 | AT3G10490 | 32.000 | 175 | 98 | 7 | 7 | 172 | 27 | 189 | 1.10e-14 | 70.5 |
| MS.gene013303.t1 | AT5G14000 | 32.934 | 167 | 79 | 7 | 5 | 158 | 13 | 159 | 1.25e-14 | 70.1 |
| MS.gene013303.t1 | AT5G64060 | 28.235 | 170 | 103 | 4 | 7 | 168 | 6 | 164 | 5.37e-14 | 70.1 |
| MS.gene013303.t1 | AT3G10490 | 32.000 | 175 | 98 | 7 | 7 | 172 | 27 | 189 | 6.77e-14 | 70.1 |
| MS.gene013303.t1 | AT2G17040 | 32.143 | 140 | 83 | 4 | 1 | 129 | 1 | 139 | 2.57e-13 | 67.4 |
| MS.gene013303.t1 | AT5G14000 | 33.099 | 142 | 80 | 5 | 5 | 137 | 13 | 148 | 2.63e-13 | 65.5 |
| MS.gene013303.t1 | AT1G34180 | 31.496 | 127 | 78 | 2 | 9 | 127 | 18 | 143 | 6.14e-13 | 67.0 |
| MS.gene013303.t1 | AT1G34180 | 31.496 | 127 | 78 | 2 | 9 | 127 | 18 | 143 | 6.47e-13 | 67.0 |
| MS.gene013303.t1 | AT3G44350 | 28.395 | 162 | 91 | 6 | 10 | 157 | 8 | 158 | 7.70e-13 | 65.5 |
| MS.gene013303.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene013303.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene013303.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene013303.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene013303.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene013303.t1 | AT3G44350 | 29.412 | 136 | 79 | 4 | 10 | 131 | 8 | 140 | 5.16e-12 | 62.0 |
| MS.gene013303.t1 | AT5G61430 | 36.111 | 108 | 50 | 6 | 60 | 158 | 5 | 102 | 2.46e-11 | 61.6 |
Find 46 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTTCATTCCCACTTTC+TGG | 0.138453 | 3.4:+87295423 | None:intergenic |
| AATAAATCCAGTACCGAAAA+TGG | 0.244913 | 3.4:-87295494 | MS.gene013303:CDS |
| ATTCGCCAATGTGGAATAAT+AGG | 0.293651 | 3.4:+87295399 | None:intergenic |
| CTTGTTCCTTGGGAATTAAA+TGG | 0.298684 | 3.4:-87295938 | MS.gene013303:intron |
| CCAGTACCGAAAATGGATAT+TGG | 0.313420 | 3.4:-87295487 | MS.gene013303:CDS |
| ATCTGTCTCTACTTGTTCCT+TGG | 0.327451 | 3.4:-87295949 | MS.gene013303:CDS |
| AATGGATATTGGGAGGAAAT+TGG | 0.352799 | 3.4:-87295476 | MS.gene013303:CDS |
| TCTGTCTCTACTTGTTCCTT+GGG | 0.353376 | 3.4:-87295948 | MS.gene013303:CDS |
| TGGTCAGTGCCTGAAAATAT+TGG | 0.355149 | 3.4:+87295443 | None:intergenic |
| GAATATCATATTTGCTCCTC+TGG | 0.364606 | 3.4:-87295341 | MS.gene013303:CDS |
| TCTAGATCAGGGATGAAGTT+TGG | 0.373168 | 3.4:+87295971 | None:intergenic |
| TGGCATGACAGGGTGAAAAT+TGG | 0.385812 | 3.4:-87295149 | MS.gene013303:intron |
| GATATTGTCAAGCTTCCTCC+TGG | 0.398901 | 3.4:-87296070 | MS.gene013303:CDS |
| CAGTACCGAAAATGGATATT+GGG | 0.414415 | 3.4:-87295486 | MS.gene013303:CDS |
| CAAAGTACTGTTTCATATCA+TGG | 0.427460 | 3.4:-87295311 | MS.gene013303:CDS |
| CACAAAGTTCTGAAACAAGT+TGG | 0.433370 | 3.4:-87295373 | MS.gene013303:CDS |
| AGTAGAGACAGATCTAGATC+AGG | 0.454456 | 3.4:+87295959 | None:intergenic |
| AGGATAAGTTCTTCATCTGT+TGG | 0.457202 | 3.4:+87296034 | None:intergenic |
| ACAGTGGAACTGATCTTTCA+TGG | 0.461699 | 3.4:-87295038 | MS.gene013303:CDS |
| AGGGTGAAAATTGGAGCGAA+TGG | 0.500867 | 3.4:-87295140 | MS.gene013303:CDS |
| GGGTGAAAATTGGAGCGAAT+GGG | 0.512033 | 3.4:-87295139 | MS.gene013303:CDS |
| ACAAAGTTCTGAAACAAGTT+GGG | 0.512054 | 3.4:-87295372 | MS.gene013303:CDS |
| TTCATATCATGGTGATAAAG+TGG | 0.528044 | 3.4:-87295300 | MS.gene013303:intron |
| TTCAGGCACTGACCAGAAAG+TGG | 0.528880 | 3.4:-87295435 | MS.gene013303:CDS |
| ATATTGTCAAGCTTCCTCCT+GGG | 0.550955 | 3.4:-87296069 | MS.gene013303:CDS |
| GGAGTACCATTTAATTCCCA+AGG | 0.563304 | 3.4:+87295932 | None:intergenic |
| CCTTAGAATAGAGAAAATGA+AGG | 0.569373 | 3.4:+87296014 | None:intergenic |
| CTATTTCTTCGCCAAAGTGA+AGG | 0.570044 | 3.4:-87295519 | MS.gene013303:CDS |
| TAGTGATTTACACCTTCTTG+AGG | 0.571144 | 3.4:+87295078 | None:intergenic |
| GTAGAGACAGATCTAGATCA+GGG | 0.575051 | 3.4:+87295960 | None:intergenic |
| AAGAACATGTATCCTCAAGA+AGG | 0.582925 | 3.4:-87295090 | MS.gene013303:CDS |
| TCAGGCACTGACCAGAAAGT+GGG | 0.598459 | 3.4:-87295434 | MS.gene013303:CDS |
| TACATATAACTACTGAGGCA+TGG | 0.622199 | 3.4:+87294963 | None:intergenic |
| TACCGAAAATGGATATTGGG+AGG | 0.624892 | 3.4:-87295483 | MS.gene013303:CDS |
| TTTGGAGTTGGATGATGACA+TGG | 0.636188 | 3.4:-87294995 | MS.gene013303:CDS |
| TTTGTGCTAATTCGCCAATG+TGG | 0.638216 | 3.4:+87295390 | None:intergenic |
| ACAGATAAGGCATTGTGCGG+TGG | 0.648627 | 3.4:-87295554 | MS.gene013303:intron |
| ATGCATACATATAACTACTG+AGG | 0.671624 | 3.4:+87294958 | None:intergenic |
| GAGTTGGATGATGACATGGA+GGG | 0.672071 | 3.4:-87294991 | MS.gene013303:CDS |
| AAGTACCTATTATTCCACAT+TGG | 0.679443 | 3.4:-87295404 | MS.gene013303:CDS |
| GTTGGAGAGAAGACAAACCC+AGG | 0.681756 | 3.4:+87296052 | None:intergenic |
| TGTACAGATAAGGCATTGTG+CGG | 0.708392 | 3.4:-87295557 | MS.gene013303:intron |
| GGAGAGAAGACAAACCCAGG+AGG | 0.709023 | 3.4:+87296055 | None:intergenic |
| AGTACTTTGATCAAATCCAG+AGG | 0.713491 | 3.4:+87295325 | None:intergenic |
| GGAGTTGGATGATGACATGG+AGG | 0.713793 | 3.4:-87294992 | MS.gene013303:CDS |
| AACAGCGATGATGATGACAG+TGG | 0.723595 | 3.4:-87295054 | MS.gene013303:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAATATTGAAGAAA+TGG | + | chr3.4:87295140-87295159 | None:intergenic | 10.0% |
| !! | CTATAGTTTAATTAATTGAA+TGG | - | chr3.4:87295865-87295884 | MS.gene013303:intron | 15.0% |
| !! | TATAGATATATAGCTAACTA+GGG | + | chr3.4:87295850-87295869 | None:intergenic | 20.0% |
| !! | TTATTTAACATGTACAGATA+AGG | - | chr3.4:87295481-87295500 | MS.gene013303:CDS | 20.0% |
| ! | AGAAAGAAAAAAAAAAGACC+AGG | - | chr3.4:87295256-87295275 | MS.gene013303:intron | 25.0% |
| ! | CTATAGATATATAGCTAACT+AGG | + | chr3.4:87295851-87295870 | None:intergenic | 25.0% |
| ! | GATACATAACATAAGAGATA+TGG | + | chr3.4:87295336-87295355 | None:intergenic | 25.0% |
| ! | TCATCGAAAGTAGTAAAATT+TGG | + | chr3.4:87295188-87295207 | None:intergenic | 25.0% |
| AAGTACCTATTATTCCACAT+TGG | - | chr3.4:87295644-87295663 | MS.gene013303:intron | 30.0% | |
| CCTTAGAATAGAGAAAATGA+AGG | + | chr3.4:87295037-87295056 | None:intergenic | 30.0% | |
| TTCATATCATGGTGATAAAG+TGG | - | chr3.4:87295748-87295767 | MS.gene013303:intron | 30.0% | |
| TTCATCGAATATTCATGCAT+TGG | + | chr3.4:87295441-87295460 | None:intergenic | 30.0% | |
| ! | AATAAATCCAGTACCGAAAA+TGG | - | chr3.4:87295554-87295573 | MS.gene013303:intron | 30.0% |
| ! | CCTTCATTTTCTCTATTCTA+AGG | - | chr3.4:87295034-87295053 | MS.gene013303:CDS | 30.0% |
| ! | GTTACAGTACCAATATTTTC+AGG | - | chr3.4:87295596-87295615 | MS.gene013303:intron | 30.0% |
| ! | TGTAGTATAAGTTCTAATCC+TGG | + | chr3.4:87295277-87295296 | None:intergenic | 30.0% |
| !! | ACAAAGTTCTGAAACAAGTT+GGG | - | chr3.4:87295676-87295695 | MS.gene013303:intron | 30.0% |
| !! | CAAAGTACTGTTTCATATCA+TGG | - | chr3.4:87295737-87295756 | MS.gene013303:intron | 30.0% |
| !! | GGATTTATTTTCCTTCACTT+TGG | + | chr3.4:87295543-87295562 | None:intergenic | 30.0% |
| AAGAACATGTATCCTCAAGA+AGG | - | chr3.4:87295958-87295977 | MS.gene013303:CDS | 35.0% | |
| AATGGATATTGGGAGGAAAT+TGG | - | chr3.4:87295572-87295591 | MS.gene013303:intron | 35.0% | |
| ACTCCAAAGACAGAAAAACT+TGG | + | chr3.4:87296041-87296060 | None:intergenic | 35.0% | |
| AGGATAAGTTCTTCATCTGT+TGG | + | chr3.4:87295017-87295036 | None:intergenic | 35.0% | |
| AGTACTTTGATCAAATCCAG+AGG | + | chr3.4:87295726-87295745 | None:intergenic | 35.0% | |
| ATTCGCCAATGTGGAATAAT+AGG | + | chr3.4:87295652-87295671 | None:intergenic | 35.0% | |
| CTTGTTCCTTGGGAATTAAA+TGG | - | chr3.4:87295110-87295129 | MS.gene013303:CDS | 35.0% | |
| GAATATCATATTTGCTCCTC+TGG | - | chr3.4:87295707-87295726 | MS.gene013303:intron | 35.0% | |
| TAGTGATTTACACCTTCTTG+AGG | + | chr3.4:87295973-87295992 | None:intergenic | 35.0% | |
| ! | AGACCAAGTTTTTCTGTCTT+TGG | - | chr3.4:87296035-87296054 | MS.gene013303:CDS | 35.0% |
| ! | CAGTACCGAAAATGGATATT+GGG | - | chr3.4:87295562-87295581 | MS.gene013303:intron | 35.0% |
| ! | TAGCTGTGTGTATGTGATTT+TGG | + | chr3.4:87295378-87295397 | None:intergenic | 35.0% |
| ! | TTCCTCCCAATATCCATTTT+CGG | + | chr3.4:87295570-87295589 | None:intergenic | 35.0% |
| !! | CACAAAGTTCTGAAACAAGT+TGG | - | chr3.4:87295675-87295694 | MS.gene013303:intron | 35.0% |
| !!! | AGTTTTTCTGTCTTTGGAGT+TGG | - | chr3.4:87296041-87296060 | MS.gene013303:CDS | 35.0% |
| ACAGTGGAACTGATCTTTCA+TGG | - | chr3.4:87296010-87296029 | MS.gene013303:CDS | 40.0% | |
| ACTTCTTCATTCCCACTTTC+TGG | + | chr3.4:87295628-87295647 | None:intergenic | 40.0% | |
| AGTAGAGACAGATCTAGATC+AGG | + | chr3.4:87295092-87295111 | None:intergenic | 40.0% | |
| ATATTGTCAAGCTTCCTCCT+GGG | - | chr3.4:87294979-87294998 | MS.gene013303:CDS | 40.0% | |
| ATCTGTCTCTACTTGTTCCT+TGG | - | chr3.4:87295099-87295118 | MS.gene013303:CDS | 40.0% | |
| ATTGAATGGTGCATCATGCA+TGG | - | chr3.4:87295879-87295898 | MS.gene013303:intron | 40.0% | |
| CATGCATTGGACATGTGTAT+TGG | + | chr3.4:87295428-87295447 | None:intergenic | 40.0% | |
| GTAGAGACAGATCTAGATCA+GGG | + | chr3.4:87295091-87295110 | None:intergenic | 40.0% | |
| TACCGAAAATGGATATTGGG+AGG | - | chr3.4:87295565-87295584 | MS.gene013303:intron | 40.0% | |
| TCTAGATCAGGGATGAAGTT+TGG | + | chr3.4:87295080-87295099 | None:intergenic | 40.0% | |
| TCTGTCTCTACTTGTTCCTT+GGG | - | chr3.4:87295100-87295119 | MS.gene013303:CDS | 40.0% | |
| TGGTCAGTGCCTGAAAATAT+TGG | + | chr3.4:87295608-87295627 | None:intergenic | 40.0% | |
| TTTGTGCTAATTCGCCAATG+TGG | + | chr3.4:87295661-87295680 | None:intergenic | 40.0% | |
| ! | CCAATATCCATTTTCGGTAC+TGG | + | chr3.4:87295564-87295583 | None:intergenic | 40.0% |
| ! | CCAGTACCGAAAATGGATAT+TGG | - | chr3.4:87295561-87295580 | MS.gene013303:intron | 40.0% |
| ! | CTATTTCTTCGCCAAAGTGA+AGG | - | chr3.4:87295529-87295548 | MS.gene013303:CDS | 40.0% |
| ! | GGAGTACCATTTAATTCCCA+AGG | + | chr3.4:87295119-87295138 | None:intergenic | 40.0% |
| ! | TTTGGAGTTGGATGATGACA+TGG | - | chr3.4:87296053-87296072 | MS.gene013303:CDS | 40.0% |
| !! | TGTACAGATAAGGCATTGTG+CGG | - | chr3.4:87295491-87295510 | MS.gene013303:CDS | 40.0% |
| AGGGTGAAAATTGGAGCGAA+TGG | - | chr3.4:87295908-87295927 | MS.gene013303:intron | 45.0% | |
| GAGTTGGATGATGACATGGA+GGG | - | chr3.4:87296057-87296076 | MS.gene013303:CDS | 45.0% | |
| GATATTGTCAAGCTTCCTCC+TGG | - | chr3.4:87294978-87294997 | MS.gene013303:CDS | 45.0% | |
| GGGTGAAAATTGGAGCGAAT+GGG | - | chr3.4:87295909-87295928 | MS.gene013303:intron | 45.0% | |
| TGGCATGACAGGGTGAAAAT+TGG | - | chr3.4:87295899-87295918 | MS.gene013303:intron | 45.0% | |
| ! | AACAGCGATGATGATGACAG+TGG | - | chr3.4:87295994-87296013 | MS.gene013303:CDS | 45.0% |
| !! | AATTTAATATATTGAATATA+CGG | - | chr3.4:87295309-87295328 | MS.gene013303:CDS | 5.0% |
| GCATCATGCATGGCATGACA+GGG | - | chr3.4:87295889-87295908 | MS.gene013303:intron | 50.0% | |
| GGAGTTGGATGATGACATGG+AGG | - | chr3.4:87296056-87296075 | MS.gene013303:CDS | 50.0% | |
| GTTGGAGAGAAGACAAACCC+AGG | + | chr3.4:87294999-87295018 | None:intergenic | 50.0% | |
| TGCATCATGCATGGCATGAC+AGG | - | chr3.4:87295888-87295907 | MS.gene013303:intron | 50.0% | |
| !! | ACAGATAAGGCATTGTGCGG+TGG | - | chr3.4:87295494-87295513 | MS.gene013303:CDS | 50.0% |
| !! | TCAGGCACTGACCAGAAAGT+GGG | - | chr3.4:87295614-87295633 | MS.gene013303:intron | 50.0% |
| !! | TTCAGGCACTGACCAGAAAG+TGG | - | chr3.4:87295613-87295632 | MS.gene013303:intron | 50.0% |
| GGAGAGAAGACAAACCCAGG+AGG | + | chr3.4:87294996-87295015 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 87294972 | 87296098 | 87294972 | ID=MS.gene013303 |
| chr3.4 | mRNA | 87294972 | 87296098 | 87294972 | ID=MS.gene013303.t1;Parent=MS.gene013303 |
| chr3.4 | exon | 87295939 | 87296098 | 87295939 | ID=MS.gene013303.t1.exon1;Parent=MS.gene013303.t1 |
| chr3.4 | CDS | 87295939 | 87296098 | 87295939 | ID=cds.MS.gene013303.t1;Parent=MS.gene013303.t1 |
| chr3.4 | exon | 87295301 | 87295572 | 87295301 | ID=MS.gene013303.t1.exon2;Parent=MS.gene013303.t1 |
| chr3.4 | CDS | 87295301 | 87295572 | 87295301 | ID=cds.MS.gene013303.t1;Parent=MS.gene013303.t1 |
| chr3.4 | exon | 87294972 | 87295160 | 87294972 | ID=MS.gene013303.t1.exon3;Parent=MS.gene013303.t1 |
| chr3.4 | CDS | 87294972 | 87295160 | 87294972 | ID=cds.MS.gene013303.t1;Parent=MS.gene013303.t1 |
| Gene Sequence |
| Protein sequence |
