AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013318

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013318.t1 MTR_3g096140 92.778 360 23 1 1 360 1 357 0.0 691
MS.gene013318.t1 MTR_3g096140 92.330 339 23 1 22 360 1 336 0.0 647
MS.gene013318.t1 MTR_3g096140 95.604 273 12 0 1 273 1 273 0.0 545
MS.gene013318.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 1.14e-106 316
MS.gene013318.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 2.86e-106 319
MS.gene013318.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 8.93e-106 317
MS.gene013318.t1 MTR_8g093580 64.255 235 78 3 1 235 1 229 1.12e-105 319
MS.gene013318.t1 MTR_1g090723 54.359 195 82 3 9 201 10 199 1.79e-68 226
MS.gene013318.t1 MTR_0036s0150 57.143 175 73 2 9 182 7 180 2.04e-68 224
MS.gene013318.t1 MTR_1g097300 50.754 199 93 1 1 194 13 211 5.64e-68 224
MS.gene013318.t1 MTR_1g090723 54.872 195 80 4 9 201 10 198 1.13e-67 223
MS.gene013318.t1 MTR_1g090723 54.872 195 80 4 9 201 10 198 1.55e-67 224
MS.gene013318.t1 MTR_1g090720 56.742 178 70 2 7 178 42 218 3.48e-63 209
MS.gene013318.t1 MTR_6g477900 57.616 151 64 0 9 159 8 158 1.04e-60 195
MS.gene013318.t1 MTR_3g064580 55.215 163 69 3 9 168 8 169 9.80e-57 196
MS.gene013318.t1 MTR_5g076850 53.704 162 74 1 9 169 8 169 1.02e-56 195
MS.gene013318.t1 MTR_2g064090 55.333 150 66 1 9 157 8 157 5.50e-56 186
MS.gene013318.t1 MTR_4g108760 51.592 157 72 2 9 163 19 173 1.89e-50 172
MS.gene013318.t1 MTR_5g069030 39.453 256 144 5 10 259 28 278 3.54e-50 177
MS.gene013318.t1 MTR_4g036030 51.656 151 68 3 9 157 9 156 5.92e-50 171
MS.gene013318.t1 MTR_3g093050 43.961 207 96 3 10 209 25 218 7.96e-50 176
MS.gene013318.t1 MTR_3g093050 43.961 207 96 3 10 209 25 218 1.50e-49 176
MS.gene013318.t1 MTR_2g062730 51.974 152 69 3 9 158 12 161 1.68e-49 169
MS.gene013318.t1 MTR_3g435150 51.250 160 74 2 6 163 15 172 2.68e-49 168
MS.gene013318.t1 MTR_1g096430 49.686 159 75 3 9 165 9 164 3.25e-49 169
MS.gene013318.t1 MTR_8g076110 41.346 208 109 5 9 214 8 204 5.16e-49 167
MS.gene013318.t1 MTR_3g088110 49.383 162 76 3 1 159 1 159 6.30e-49 166
MS.gene013318.t1 MTR_5g014300 46.286 175 84 2 9 176 8 179 7.15e-49 167
MS.gene013318.t1 MTR_2g078700 53.165 158 66 4 9 161 25 179 3.21e-48 167
MS.gene013318.t1 MTR_4g098630 39.474 228 114 4 9 212 8 235 3.88e-48 165
MS.gene013318.t1 MTR_5g021710 49.669 151 71 3 9 157 10 157 6.34e-48 166
MS.gene013318.t1 MTR_6g084430 51.678 149 68 2 9 157 7 151 1.06e-47 164
MS.gene013318.t1 MTR_4g035590 50.331 151 71 2 9 158 10 157 1.23e-47 165
MS.gene013318.t1 MTR_2g079990 47.651 149 76 1 9 157 18 164 1.52e-47 165
MS.gene013318.t1 MTR_4g101680 50.993 151 69 3 9 157 9 156 2.00e-47 164
MS.gene013318.t1 MTR_3g093040 48.649 148 76 0 10 157 111 258 2.80e-47 163
MS.gene013318.t1 MTR_7g085220 45.062 162 74 3 9 157 10 169 5.80e-47 163
MS.gene013318.t1 MTR_2g086880 42.246 187 95 3 7 188 18 196 6.62e-47 167
MS.gene013318.t1 MTR_7g085260 51.282 156 66 4 9 157 19 171 7.47e-47 164
MS.gene013318.t1 MTR_2g086880 49.324 148 67 2 7 154 18 157 8.59e-47 167
MS.gene013318.t1 MTR_6g012670 46.154 169 83 3 9 173 22 186 1.81e-46 161
MS.gene013318.t1 MTR_3g109340 49.045 157 75 3 9 163 24 177 1.77e-45 159
MS.gene013318.t1 MTR_8g467490 45.732 164 76 4 5 157 12 173 1.89e-45 160
MS.gene013318.t1 MTR_7g100990 32.955 264 142 6 9 266 13 247 2.63e-45 158
MS.gene013318.t1 MTR_3g070030 44.068 177 93 3 1 173 12 186 3.25e-45 158
MS.gene013318.t1 MTR_3g109340 48.408 157 75 3 9 163 24 176 5.80e-45 158
MS.gene013318.t1 MTR_6g011860 45.963 161 75 4 7 157 15 173 8.24e-45 158
MS.gene013318.t1 MTR_2157s0010 42.857 168 82 3 7 162 8 173 1.01e-44 155
MS.gene013318.t1 MTR_5g041940 47.403 154 75 2 9 158 5 156 2.30e-44 154
MS.gene013318.t1 MTR_2g080010 45.062 162 74 4 9 157 17 176 4.20e-44 155
MS.gene013318.t1 MTR_4g134460 45.570 158 81 3 3 159 50 203 5.78e-44 157
MS.gene013318.t1 MTR_5g012080 46.405 153 75 5 9 157 9 158 9.34e-44 154
MS.gene013318.t1 MTR_7g011130 43.503 177 82 4 10 170 22 196 1.22e-43 154
MS.gene013318.t1 MTR_4g081870 44.586 157 81 3 9 161 11 165 1.83e-43 152
MS.gene013318.t1 MTR_5g040420 44.172 163 79 4 5 157 12 172 2.97e-43 154
MS.gene013318.t1 MTR_8g059170 47.020 151 76 2 9 157 16 164 3.54e-43 152
MS.gene013318.t1 MTR_7g005280 47.561 164 71 5 9 167 17 170 5.24e-43 150
MS.gene013318.t1 MTR_7g011120 35.521 259 139 6 10 256 11 253 6.70e-43 151
MS.gene013318.t1 MTR_4g089135 43.182 176 73 4 7 157 15 188 9.03e-43 152
MS.gene013318.t1 MTR_2g093810 47.097 155 74 4 9 157 16 168 9.46e-43 151
MS.gene013318.t1 MTR_4g075980 45.000 160 78 4 1 157 9 161 1.75e-42 150
MS.gene013318.t1 MTR_2g079990 49.265 136 67 1 9 144 18 151 2.16e-42 152
MS.gene013318.t1 MTR_1g008740 48.701 154 73 4 9 159 15 165 2.31e-42 151
MS.gene013318.t1 MTR_8g094580 45.806 155 77 3 9 159 9 160 2.47e-42 149
MS.gene013318.t1 MTR_1g008740 48.701 154 73 4 9 159 29 179 3.21e-42 151
MS.gene013318.t1 MTR_6g032770 46.405 153 74 4 10 157 21 170 4.16e-42 151
MS.gene013318.t1 MTR_8g024480 43.125 160 81 2 9 158 17 176 4.18e-42 152
MS.gene013318.t1 MTR_3g096920 46.104 154 77 3 9 159 9 159 2.03e-41 147
MS.gene013318.t1 MTR_2g064470 47.531 162 71 5 1 157 6 158 2.86e-41 147
MS.gene013318.t1 MTR_3g070040 43.636 165 83 4 11 170 12 171 1.93e-39 143
MS.gene013318.t1 MTR_1g069805 45.033 151 75 3 9 157 12 156 2.08e-39 141
MS.gene013318.t1 MTR_7g097090 44.667 150 75 3 9 156 12 155 1.12e-37 137
MS.gene013318.t1 MTR_5g090970 40.719 167 85 3 3 157 14 178 1.69e-37 137
MS.gene013318.t1 MTR_8g023840 47.297 148 69 5 10 154 14 155 2.29e-37 139
MS.gene013318.t1 MTR_2g068880 41.212 165 81 3 8 157 23 186 4.21e-37 136
MS.gene013318.t1 MTR_5g090970 40.120 167 85 3 3 157 14 177 4.33e-37 136
MS.gene013318.t1 MTR_3g096920 46.575 146 73 3 9 154 9 149 5.39e-37 136
MS.gene013318.t1 MTR_8g099750 41.071 168 84 4 9 169 16 175 8.74e-37 133
MS.gene013318.t1 MTR_3g116070 45.926 135 68 3 9 140 25 157 1.76e-36 135
MS.gene013318.t1 MTR_8g023860 43.624 149 75 5 10 155 15 157 9.99e-36 135
MS.gene013318.t1 MTR_2g068920 40.606 165 82 4 8 157 22 185 4.27e-35 130
MS.gene013318.t1 MTR_8g023900 43.709 151 78 5 10 157 15 161 7.83e-35 133
MS.gene013318.t1 MTR_8g023900 43.226 155 79 5 6 157 192 340 4.20e-34 131
MS.gene013318.t1 MTR_3g098810 40.719 167 85 3 9 165 16 178 3.63e-34 126
MS.gene013318.t1 MTR_8g023930 42.384 151 78 5 10 157 27 171 1.14e-33 130
MS.gene013318.t1 MTR_3g098810 45.385 130 63 2 9 134 16 141 2.73e-31 117
MS.gene013318.t1 MTR_4g052620 38.217 157 90 5 6 155 4 160 4.64e-30 116
MS.gene013318.t1 MTR_2g086690 39.355 155 86 6 9 155 6 160 4.96e-30 115
MS.gene013318.t1 MTR_7g105170 33.036 224 127 9 7 211 4 223 4.19e-29 113
MS.gene013318.t1 MTR_8g023880 40.462 173 75 8 3 157 2 164 2.11e-28 112
MS.gene013318.t1 MTR_4g094302 38.125 160 77 6 9 158 13 160 1.38e-26 104
MS.gene013318.t1 MTR_8g094580 44.660 103 52 2 61 159 5 106 4.43e-25 102
MS.gene013318.t1 MTR_4g094302 42.308 130 59 6 9 134 13 130 1.84e-24 98.2
MS.gene013318.t1 MTR_8g093790 36.250 160 76 7 9 166 12 147 3.51e-20 87.4
MS.gene013318.t1 MTR_3g096400 33.516 182 98 8 1 168 1 173 5.76e-19 84.7
MS.gene013318.t1 MTR_7g070140 48.750 80 39 1 57 134 12 91 3.00e-18 80.5
MS.gene013318.t1 MTR_7g083330 29.851 134 89 4 1 132 11 141 2.97e-14 70.9
MS.gene013318.t1 MTR_7g083360 28.082 146 101 3 10 154 13 155 7.03e-14 68.9
MS.gene013318.t1 MTR_1g087190 60.870 46 17 1 9 53 7 52 3.21e-13 63.9
MS.gene013318.t1 MTR_7g070150 53.704 54 22 2 104 157 7 57 6.30e-12 61.6
MS.gene013318.t1 MTR_7g116460 34.194 155 84 10 13 157 11 157 1.05e-11 63.9
MS.gene013318.t1 MTR_7g083370 30.000 130 75 4 10 132 13 133 8.63e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013318.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene013318.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene013318.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene013318.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene013318.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene013318.t1 AT5G64060 55.042 238 99 3 1 238 1 230 6.67e-88 269
MS.gene013318.t1 AT5G04410 61.538 182 69 1 7 188 9 189 1.02e-78 252
MS.gene013318.t1 AT3G10500 63.253 166 61 0 7 172 9 174 1.78e-74 240
MS.gene013318.t1 AT1G34190 47.867 211 109 1 5 215 14 223 1.15e-67 223
MS.gene013318.t1 AT3G10480 56.725 171 73 1 7 177 27 196 8.30e-65 212
MS.gene013318.t1 AT3G10480 56.977 172 72 2 7 177 27 197 1.32e-64 212
MS.gene013318.t1 AT3G10490 55.114 176 77 2 7 181 27 201 3.30e-64 204
MS.gene013318.t1 AT3G10490 55.114 176 77 2 7 181 27 201 5.38e-63 207
MS.gene013318.t1 AT1G34180 50.267 187 92 1 5 190 14 200 1.25e-62 207
MS.gene013318.t1 AT1G34180 50.267 187 92 1 5 190 14 200 1.00e-61 207
MS.gene013318.t1 AT3G17730 58.278 151 63 0 9 159 8 158 2.61e-60 194
MS.gene013318.t1 AT1G34180 47.236 199 92 2 5 190 14 212 1.82e-59 199
MS.gene013318.t1 AT3G10480 48.293 205 71 3 7 177 27 230 3.07e-59 200
MS.gene013318.t1 AT1G65910 52.273 176 83 1 7 181 6 181 1.07e-58 201
MS.gene013318.t1 AT1G34180 47.236 199 92 2 5 190 14 212 1.31e-58 199
MS.gene013318.t1 AT1G33060 54.054 148 68 0 10 157 27 174 1.51e-54 189
MS.gene013318.t1 AT1G33060 54.054 148 68 0 10 157 27 174 1.62e-54 189
MS.gene013318.t1 AT3G03200 55.333 150 66 1 9 157 8 157 6.28e-54 184
MS.gene013318.t1 AT5G24590 46.860 207 92 5 10 215 16 205 1.13e-53 183
MS.gene013318.t1 AT5G17260 52.667 150 70 1 9 157 8 157 8.21e-53 182
MS.gene013318.t1 AT2G27300 53.378 148 61 2 7 154 14 153 1.17e-52 177
MS.gene013318.t1 AT3G49530 51.333 150 72 1 10 158 16 165 3.65e-51 176
MS.gene013318.t1 AT4G35580 54.054 148 68 0 10 157 12 159 4.07e-51 178
MS.gene013318.t1 AT1G54330 52.903 155 70 1 9 163 8 159 4.38e-51 172
MS.gene013318.t1 AT4G35580 54.054 148 68 0 10 157 12 159 4.89e-51 178
MS.gene013318.t1 AT4G35580 54.054 148 68 0 10 157 12 159 5.02e-51 178
MS.gene013318.t1 AT4G17980 51.266 158 73 2 4 157 3 160 5.65e-51 171
MS.gene013318.t1 AT5G61430 52.866 157 70 2 9 163 18 172 7.16e-51 173
MS.gene013318.t1 AT4G17980 51.266 158 73 2 4 157 3 160 1.12e-50 171
MS.gene013318.t1 AT3G49530 51.333 150 72 1 10 158 16 165 1.29e-50 176
MS.gene013318.t1 AT5G22290 47.126 174 76 3 3 167 17 183 1.33e-50 172
MS.gene013318.t1 AT5G39610 54.430 158 66 3 9 163 22 176 1.85e-50 170
MS.gene013318.t1 AT5G46590 49.359 156 77 2 4 157 3 158 1.19e-49 168
MS.gene013318.t1 AT1G71930 48.734 158 78 2 7 163 9 164 2.97e-49 168
MS.gene013318.t1 AT1G71930 48.734 158 78 2 7 163 9 164 2.97e-49 168
MS.gene013318.t1 AT4G10350 50.331 151 74 1 9 158 11 161 3.89e-49 169
MS.gene013318.t1 AT3G44290 51.020 147 64 2 8 154 15 153 6.79e-49 164
MS.gene013318.t1 AT5G07680 51.592 157 72 2 9 163 5 159 8.70e-49 167
MS.gene013318.t1 AT3G18400 51.678 149 69 2 9 157 7 152 9.33e-49 167
MS.gene013318.t1 AT1G32870 51.786 168 77 2 7 172 10 175 1.03e-48 172
MS.gene013318.t1 AT5G07680 51.592 157 72 2 9 163 19 173 1.18e-48 167
MS.gene013318.t1 AT1G32870 51.786 168 77 2 7 172 10 175 1.23e-48 172
MS.gene013318.t1 AT1G12260 47.561 164 77 4 9 168 9 167 1.63e-48 167
MS.gene013318.t1 AT1G12260 47.561 164 77 4 9 168 9 167 2.53e-48 168
MS.gene013318.t1 AT1G32870 51.786 168 77 2 7 172 46 211 3.18e-48 171
MS.gene013318.t1 AT3G44290 51.370 146 63 2 9 154 16 153 5.66e-48 165
MS.gene013318.t1 AT2G18060 41.500 200 104 4 9 206 11 199 6.25e-48 166
MS.gene013318.t1 AT2G18060 41.500 200 104 4 9 206 11 199 6.25e-48 166
MS.gene013318.t1 AT5G18270 44.811 212 105 6 9 215 23 227 6.63e-48 165
MS.gene013318.t1 AT5G46590 52.174 138 65 1 4 140 3 140 1.17e-47 163
MS.gene013318.t1 AT1G01720 46.746 169 83 3 1 165 1 166 1.85e-47 162
MS.gene013318.t1 AT5G18270 44.340 212 106 6 9 215 23 227 1.93e-47 164
MS.gene013318.t1 AT1G33280 49.669 151 72 2 9 158 10 157 2.11e-47 163
MS.gene013318.t1 AT2G24430 50.318 157 73 3 3 157 12 165 3.32e-47 163
MS.gene013318.t1 AT2G24430 50.318 157 73 3 3 157 12 165 3.32e-47 163
MS.gene013318.t1 AT1G77450 48.701 154 73 3 9 159 12 162 3.60e-47 160
MS.gene013318.t1 AT3G29035 49.697 165 79 2 9 171 26 188 5.50e-47 162
MS.gene013318.t1 AT1G62700 48.701 154 70 4 9 158 9 157 7.51e-47 164
MS.gene013318.t1 AT1G62700 48.701 154 70 4 9 158 9 157 7.51e-47 164
MS.gene013318.t1 AT4G36160 48.026 152 74 3 9 158 12 160 1.40e-46 163
MS.gene013318.t1 AT4G36160 48.026 152 74 3 9 158 12 160 1.40e-46 163
MS.gene013318.t1 AT4G36160 48.026 152 74 3 9 158 16 164 1.50e-46 163
MS.gene013318.t1 AT1G69490 38.756 209 110 3 9 201 11 217 2.06e-46 159
MS.gene013318.t1 AT4G27410 46.980 149 77 1 9 157 16 162 2.88e-46 160
MS.gene013318.t1 AT1G52890 47.333 150 77 1 9 158 16 163 3.53e-46 160
MS.gene013318.t1 AT3G15170 48.765 162 77 3 6 163 19 178 7.11e-46 159
MS.gene013318.t1 AT3G15500 46.667 150 78 1 9 158 16 163 9.23e-46 159
MS.gene013318.t1 AT5G53950 50.311 161 72 4 2 157 12 169 2.96e-45 159
MS.gene013318.t1 AT5G08790 46.626 163 78 4 3 159 2 161 3.24e-45 157
MS.gene013318.t1 AT1G56010 45.506 178 90 4 1 174 14 188 3.36e-45 158
MS.gene013318.t1 AT3G04060 49.677 155 73 3 9 160 22 174 6.46e-45 157
MS.gene013318.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene013318.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene013318.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene013318.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene013318.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene013318.t1 AT1G32510 45.000 160 80 2 6 157 5 164 1.96e-44 154
MS.gene013318.t1 AT5G62380 48.684 152 73 3 9 158 9 157 2.86e-44 156
MS.gene013318.t1 AT5G62380 48.684 152 73 3 9 158 9 157 2.86e-44 156
MS.gene013318.t1 AT5G66300 45.181 166 85 4 9 171 14 176 3.99e-44 154
MS.gene013318.t1 AT3G12977 46.753 154 79 2 9 161 20 171 1.44e-43 152
MS.gene013318.t1 AT1G61110 47.531 162 70 4 9 157 18 177 2.66e-43 152
MS.gene013318.t1 AT2G02450 44.516 155 81 3 6 159 50 200 3.91e-43 154
MS.gene013318.t1 AT3G04070 44.099 161 76 3 9 157 12 170 4.53e-43 152
MS.gene013318.t1 AT2G02450 44.516 155 81 3 6 159 50 200 4.69e-43 154
MS.gene013318.t1 AT4G27410 40.462 173 88 1 9 166 16 188 9.75e-43 151
MS.gene013318.t1 AT5G39820 42.857 175 75 5 6 157 19 191 9.83e-43 152
MS.gene013318.t1 AT1G26870 44.785 163 77 4 6 157 15 175 1.37e-42 153
MS.gene013318.t1 AT5G13180 48.125 160 71 4 9 164 16 167 2.31e-42 148
MS.gene013318.t1 AT1G76420 48.366 153 74 3 9 159 24 173 3.30e-42 150
MS.gene013318.t1 AT3G15510 43.069 202 89 9 11 198 21 210 3.34e-42 151
MS.gene013318.t1 AT5G63790 44.785 163 81 4 3 159 45 204 6.11e-42 149
MS.gene013318.t1 AT5G63790 44.785 163 81 4 3 159 55 214 7.75e-42 149
MS.gene013318.t1 AT3G04070 35.507 276 156 7 9 277 12 272 8.70e-42 150
MS.gene013318.t1 AT2G33480 51.634 153 63 4 9 158 17 161 1.82e-41 146
MS.gene013318.t1 AT2G17040 44.444 153 75 4 8 157 7 152 3.07e-41 146
MS.gene013318.t1 AT2G33480 50.000 152 65 3 9 158 17 159 3.90e-41 145
MS.gene013318.t1 AT2G43000 42.949 156 86 2 3 157 14 167 2.80e-40 143
MS.gene013318.t1 AT1G32770 41.975 162 83 2 9 159 18 179 3.76e-40 145
MS.gene013318.t1 AT3G61910 43.636 165 75 4 9 157 13 175 8.76e-40 144
MS.gene013318.t1 AT2G46770 40.964 166 80 3 9 158 18 181 2.28e-39 143
MS.gene013318.t1 AT1G52880 45.283 159 73 4 11 157 21 177 1.05e-38 140
MS.gene013318.t1 AT5G04395 43.452 168 77 4 2 155 24 187 1.91e-36 130
MS.gene013318.t1 AT4G28530 43.114 167 71 4 9 157 12 172 5.87e-36 134
MS.gene013318.t1 AT3G12910 38.953 172 85 4 3 157 17 185 3.71e-34 128
MS.gene013318.t1 AT5G61430 55.046 109 47 1 57 163 1 109 7.67e-34 126
MS.gene013318.t1 AT1G56010 47.863 117 58 1 61 174 5 121 1.48e-30 117
MS.gene013318.t1 AT3G12977 49.524 105 52 1 59 162 15 119 1.69e-30 116
MS.gene013318.t1 AT4G10350 50.526 95 47 0 64 158 20 114 1.24e-29 115
MS.gene013318.t1 AT3G10490 53.922 102 45 2 81 181 1 101 4.17e-29 115
MS.gene013318.t1 AT3G10490 53.922 102 45 2 81 181 1 101 4.17e-29 115
MS.gene013318.t1 AT4G01520 40.000 155 79 5 10 157 7 154 5.61e-29 114
MS.gene013318.t1 AT4G01550 40.698 172 83 7 10 171 7 169 1.26e-28 115
MS.gene013318.t1 AT5G22380 38.217 157 90 5 10 159 8 164 2.11e-28 111
MS.gene013318.t1 AT4G01540 40.000 155 79 5 10 157 7 154 4.19e-28 114
MS.gene013318.t1 AT3G44350 38.710 155 90 5 10 159 8 162 5.30e-28 110
MS.gene013318.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.39e-28 113
MS.gene013318.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.50e-28 113
MS.gene013318.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.80e-28 114
MS.gene013318.t1 AT1G02230 40.127 157 77 6 6 154 1 148 2.46e-25 105
MS.gene013318.t1 AT3G44350 37.908 153 90 5 10 157 8 160 2.75e-25 100
MS.gene013318.t1 AT3G04420 37.333 150 87 2 10 157 6 150 2.52e-24 101
MS.gene013318.t1 AT3G04420 37.333 150 87 2 10 157 6 150 6.94e-24 101
MS.gene013318.t1 AT2G33480 49.524 105 49 3 57 158 1 104 1.43e-23 97.4
MS.gene013318.t1 AT1G02250 38.816 152 77 5 10 154 6 148 1.12e-21 95.1
MS.gene013318.t1 AT5G64530 35.329 167 74 7 9 157 5 155 1.23e-20 88.6
MS.gene013318.t1 AT5G64530 40.909 132 58 6 9 136 5 120 6.42e-20 85.9
MS.gene013318.t1 AT1G01010 38.608 158 74 7 10 154 6 153 6.50e-20 90.9
MS.gene013318.t1 AT1G02220 35.294 153 79 5 10 155 6 145 1.12e-19 89.7
MS.gene013318.t1 AT2G18060 36.364 121 65 3 87 206 2 111 3.13e-19 87.0
MS.gene013318.t1 AT4G28530 38.281 128 59 3 9 118 12 137 4.68e-19 87.0
MS.gene013318.t1 AT5G22290 42.222 90 37 2 87 167 1 84 8.35e-18 82.0
MS.gene013318.t1 AT2G43000 39.080 87 52 1 72 157 3 89 2.26e-15 74.3
MS.gene013318.t1 AT3G56530 30.263 152 95 4 9 155 54 199 2.43e-14 73.6
MS.gene013318.t1 AT5G14000 33.071 127 79 3 10 134 18 140 1.69e-12 65.1
MS.gene013318.t1 AT5G14000 33.071 127 79 3 10 134 18 140 3.76e-12 65.5
MS.gene013318.t1 AT3G55210 25.904 166 99 6 6 155 10 167 3.42e-11 63.5
MS.gene013318.t1 AT1G28470 30.939 181 99 9 10 173 80 251 3.56e-11 63.9
MS.gene013318.t1 AT3G04430 30.435 138 72 6 13 133 6 136 4.40e-11 62.0

Find 109 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCAGTCTTTCTCATTAAA+TGG 0.189856 3.4:-87128276 None:intergenic
TGTCATTTACTTCAGAAATA+TGG 0.230925 3.4:-87128380 None:intergenic
TCCATACTGTGCACCATTCC+TGG 0.233076 3.4:-87128250 None:intergenic
ATCTCATTTGGAATTAAATA+AGG 0.245537 3.4:-87130323 None:intergenic
CAATCAGTTCGGTCTCCTTT+AGG 0.274643 3.4:-87126934 None:intergenic
GTGCAATATTTCTTTCCAAC+AGG 0.361824 3.4:-87126784 None:intergenic
TCAAGCAACTCAAAGAAATC+AGG 0.367048 3.4:-87130479 None:intergenic
GGTGCAGACACAGCAGCAAC+AGG 0.376155 3.4:-87128333 None:intergenic
GAAACAAAATTGATGATTCC+AGG 0.377486 3.4:+87126469 MS.gene013318:CDS
TGTTTAGTCTGCCAGGATAA+TGG 0.379048 3.4:-87130512 None:intergenic
CCCAGGAATGGTGCACAGTA+TGG 0.387270 3.4:+87128249 MS.gene013318:CDS
AGAACTCCTATGTGATTTGT+AGG 0.387741 3.4:+87128202 MS.gene013318:intron
AACCATTTAATGAGAAAGAC+TGG 0.390374 3.4:+87128274 MS.gene013318:CDS
AGTTCAGCAATGACATGAAA+AGG 0.397881 3.4:-87126565 None:intergenic
CCCTCTGCAAGTGGATGTAT+TGG 0.400344 3.4:+87128408 MS.gene013318:CDS
GCACGGGAGGGAGGATGAAT+CGG 0.411671 3.4:+87126803 MS.gene013318:CDS
TATTAACAGCTTGGTTGGAT+TGG 0.414108 3.4:+87130364 MS.gene013318:CDS
CCATACTGTGCACCATTCCT+GGG 0.415740 3.4:-87128249 None:intergenic
GGAGATATTAACAGCTTGGT+TGG 0.445872 3.4:+87130359 MS.gene013318:CDS
GACGATGAAAATGCATTGGC+CGG 0.464243 3.4:+87128540 MS.gene013318:CDS
ACCTAGAGGTGCCATTATCC+TGG 0.465437 3.4:+87130501 MS.gene013318:CDS
ATGAATCGGGCAACAGAAGT+AGG 0.466475 3.4:+87126817 MS.gene013318:CDS
CTAAAGGAGACCGAACTGAT+TGG 0.467195 3.4:+87126935 MS.gene013318:CDS
TGGTACTTCTTTACCCCTGT+TGG 0.468244 3.4:+87126769 MS.gene013318:CDS
GCCATCATGTTTAGTCTGCC+AGG 0.468396 3.4:-87130519 None:intergenic
ATAAACGAAAAGCTATTTGC+TGG 0.469573 3.4:+87130431 MS.gene013318:CDS
AAAAGGAAGGTCCTGGTCCC+AGG 0.470057 3.4:+87128232 MS.gene013318:CDS
TAAAGGAGACCGAACTGATT+GGG 0.479184 3.4:+87126936 MS.gene013318:CDS
CACGGGAGGGAGGATGAATC+GGG 0.479266 3.4:+87126804 MS.gene013318:CDS
CTTTGAGTTGCTTGACCTAG+AGG 0.489029 3.4:+87130487 MS.gene013318:CDS
CGACAGAAGGTTGATAATCC+TGG 0.495670 3.4:+87130275 MS.gene013318:intron
ACGACACACCCTTCAGCTCT+AGG 0.498439 3.4:+87128474 MS.gene013318:CDS
TCAGCGTTGTTTGCTTGACC+AGG 0.500954 3.4:-87130293 None:intergenic
CATTTACAAGTATGCTCCAT+GGG 0.502977 3.4:+87126591 MS.gene013318:CDS
TCACCCCACTGATGTTGAGC+TGG 0.506550 3.4:+87126501 MS.gene013318:CDS
CTATCAAGATTGATGCCCTC+TGG 0.507191 3.4:+87128450 MS.gene013318:CDS
CACACTGGCAAAGCTCCTAA+AGG 0.508822 3.4:+87126919 MS.gene013318:CDS
GGGCAACAGAAGTAGGGTAC+TGG 0.511584 3.4:+87126824 MS.gene013318:CDS
GTAGGGTACTGGAAGACTAC+AGG 0.511858 3.4:+87126835 MS.gene013318:CDS
GCTTGATTGCCTAGAGCTGA+AGG 0.517653 3.4:-87128483 None:intergenic
CTTTGCCAGTGTGAAACACC+AGG 0.519578 3.4:-87126909 None:intergenic
GTTCAGCAATGACATGAAAA+GGG 0.521712 3.4:-87126564 None:intergenic
CCTGGGAGATATTAACAGCT+TGG 0.523071 3.4:+87130355 MS.gene013318:CDS
GTGGAACACCATTGTCAGCT+AGG 0.523981 3.4:-87126990 None:intergenic
GATTTGTAGGGTATTTCAAA+AGG 0.527496 3.4:+87128215 MS.gene013318:CDS
AGCTTGGTTGGATTGGATGA+TGG 0.527918 3.4:+87130371 MS.gene013318:CDS
TGTAGGGTATTTCAAAAGGA+AGG 0.527921 3.4:+87128219 MS.gene013318:CDS
TCCAATACATCCACTTGCAG+AGG 0.532823 3.4:-87128409 None:intergenic
TTTCGACGATGAAAATGCAT+TGG 0.532966 3.4:+87128536 MS.gene013318:CDS
ATCGTCGAAAATAGCAAGCA+TGG 0.533664 3.4:-87128523 None:intergenic
CATGCATAACCCAATCAGTT+CGG 0.542397 3.4:-87126945 None:intergenic
CAAGCAACTCAAAGAAATCA+GGG 0.542667 3.4:-87130478 None:intergenic
AGCTGACAATGGTGTTCCAC+AGG 0.546378 3.4:+87126993 MS.gene013318:CDS
AGAAATATTGCACGGGAGGG+AGG 0.549227 3.4:+87126794 MS.gene013318:CDS
TCTTGATAGACATGATAAAG+AGG 0.553266 3.4:-87128436 None:intergenic
TCCAAACCTGGTAGATCCCA+TGG 0.553951 3.4:-87126607 None:intergenic
AAACAAAATTGATGATTCCA+GGG 0.554783 3.4:+87126470 MS.gene013318:CDS
GAACATAAGAATCAAGTGGT+GGG 0.560868 3.4:+87126874 MS.gene013318:CDS
TGCAATATTTCTTTCCAACA+GGG 0.561122 3.4:-87126783 None:intergenic
GAAGGTCCTGGTCCCAGGAA+TGG 0.561485 3.4:+87128237 MS.gene013318:CDS
TCAGAAATATGGCTTGAGCT+AGG 0.568979 3.4:-87128369 None:intergenic
GATAAATCTTTGCTCAAGAG+TGG 0.570392 3.4:+87126736 MS.gene013318:intron
GTTGGATTGGATGATGGAAG+CGG 0.572350 3.4:+87130377 MS.gene013318:CDS
GGAAGACTACAGGGAAGGAT+AGG 0.572952 3.4:+87126845 MS.gene013318:CDS
ACATTTACAAGTATGCTCCA+TGG 0.574983 3.4:+87126590 MS.gene013318:CDS
ACGATGAAAATGCATTGGCC+GGG 0.583391 3.4:+87128541 MS.gene013318:CDS
GTATTTCAAAAGGAAGGTCC+TGG 0.583445 3.4:+87128225 MS.gene013318:CDS
GAACTCCTATGTGATTTGTA+GGG 0.583857 3.4:+87128203 MS.gene013318:intron
TGAAGGGTGTGTCGTGCCAG+AGG 0.584025 3.4:-87128466 None:intergenic
AACATAAGAATCAAGTGGTG+GGG 0.590194 3.4:+87126875 MS.gene013318:CDS
GAAGGGTGTGTCGTGCCAGA+GGG 0.592236 3.4:-87128465 None:intergenic
TGAATCGGGCAACAGAAGTA+GGG 0.592463 3.4:+87126818 MS.gene013318:CDS
GGTCAAGCAAACAACGCTGA+AGG 0.593547 3.4:+87130296 MS.gene013318:CDS
ATTACCAGCTCAACATCAGT+GGG 0.596276 3.4:-87126505 None:intergenic
GGAAAGAAATATTGCACGGG+AGG 0.596853 3.4:+87126790 MS.gene013318:CDS
GACATGCATCCCTCTGCAAG+TGG 0.596887 3.4:+87128399 MS.gene013318:CDS
AGAACCCTGGTGTTTCACAC+TGG 0.601634 3.4:+87126904 MS.gene013318:CDS
GCCAGGATAATGGCACCTCT+AGG 0.602723 3.4:-87130502 None:intergenic
TGTGCACCATTCCTGGGACC+AGG 0.603992 3.4:-87128243 None:intergenic
GTGGGGTGAAAACGAAACCC+TGG 0.604367 3.4:-87126487 None:intergenic
CATTACCAGCTCAACATCAG+TGG 0.606060 3.4:-87126506 None:intergenic
AGCAACTCAAAGAAATCAGG+GGG 0.608948 3.4:-87130476 None:intergenic
TCCTGGCAGACTAAACATGA+TGG 0.610442 3.4:+87130518 MS.gene013318:CDS
CCAAGCTGTTAATATCTCCC+AGG 0.614179 3.4:-87130355 None:intergenic
CTTGATTGCCTAGAGCTGAA+GGG 0.615214 3.4:-87128482 None:intergenic
GAATGAAAACAATGGATCTG+AGG 0.618267 3.4:+87128563 MS.gene013318:CDS
GCAATATTTCTTTCCAACAG+GGG 0.618582 3.4:-87126782 None:intergenic
CCAATACATCCACTTGCAGA+GGG 0.625389 3.4:-87128408 None:intergenic
GAGCTAGGTAGAATGAGAGC+TGG 0.627457 3.4:-87128354 None:intergenic
GTTGGAAAGAAATATTGCAC+GGG 0.629534 3.4:+87126787 MS.gene013318:CDS
TGAACATAAGAATCAAGTGG+TGG 0.630537 3.4:+87126873 MS.gene013318:CDS
TGTTGGAAAGAAATATTGCA+CGG 0.632190 3.4:+87126786 MS.gene013318:CDS
ACCATTTAATGAGAAAGACT+GGG 0.636505 3.4:+87128275 MS.gene013318:CDS
TATGCTCCATGGGATCTACC+AGG 0.645247 3.4:+87126601 MS.gene013318:CDS
TAGGGTACTGGAAGACTACA+GGG 0.648401 3.4:+87126836 MS.gene013318:CDS
TTGGCCGGGAATGAAAACAA+TGG 0.650090 3.4:+87128555 MS.gene013318:CDS
GACAAAGACCTAGCTGACAA+TGG 0.652509 3.4:+87126982 MS.gene013318:CDS
GTGCAGACACAGCAGCAACA+GGG 0.657913 3.4:-87128332 None:intergenic
AAATACCCTACAAATCACAT+AGG 0.659266 3.4:-87128208 None:intergenic
TCAAGAGTGGTGATTTGCAA+TGG 0.660182 3.4:+87126749 MS.gene013318:CDS
GAAAGAAATATTGCACGGGA+GGG 0.676449 3.4:+87126791 MS.gene013318:CDS
GATTGAACATAAGAATCAAG+TGG 0.676975 3.4:+87126870 MS.gene013318:CDS
GTACTGGAAGACTACAGGGA+AGG 0.680520 3.4:+87126840 MS.gene013318:CDS
AAGCAACTCAAAGAAATCAG+GGG 0.683918 3.4:-87130477 None:intergenic
GAAAGACTGGGATAGCGAAG+AGG 0.695888 3.4:+87128287 MS.gene013318:CDS
TTTGCCAGTGTGAAACACCA+GGG 0.703208 3.4:-87126908 None:intergenic
GGTGGGGATGATAAGAACCC+TGG 0.707991 3.4:+87126891 MS.gene013318:CDS
GCAACTCAAAGAAATCAGGG+GGG 0.804791 3.4:-87130475 None:intergenic
TTACCAGCTCAACATCAGTG+GGG 0.822926 3.4:-87126504 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTATTAGTATTAACA+AGG + chr3.4:87127491-87127510 MS.gene013318:intron 10.0%
!! ATTATTATTAGTATTAACAA+GGG + chr3.4:87127492-87127511 MS.gene013318:intron 10.0%
!! TAAAAAAATAAAAAAAGTTG+AGG - chr3.4:87128701-87128720 None:intergenic 10.0%
!! TTATTATTAGTATTAATAAG+GGG + chr3.4:87127528-87127547 MS.gene013318:intron 10.0%
!!! ATTTTTGTTAAAAAAATTTG+GGG + chr3.4:87129620-87129639 MS.gene013318:intron 10.0%
!! TTAAAGATAACTAAAAAAAG+AGG - chr3.4:87128752-87128771 None:intergenic 15.0%
!! TTATTATTAGTATTAACAAG+GGG + chr3.4:87127493-87127512 MS.gene013318:intron 15.0%
!! TTGAAATAAGACTTATATTT+AGG + chr3.4:87127586-87127605 MS.gene013318:intron 15.0%
!!! ACTAATAATAATTTGTCTTA+GGG - chr3.4:87127484-87127503 None:intergenic 15.0%
!!! ATTTCTCTTATTTGTTTTTT+TGG + chr3.4:87127745-87127764 MS.gene013318:intron 15.0%
!!! TACTAATAATAATTTGTCTT+AGG - chr3.4:87127485-87127504 None:intergenic 15.0%
!!! TTATAGTATTTTCATCTTTT+TGG - chr3.4:87130415-87130434 None:intergenic 15.0%
!!! TTTTTGTTAAAAAAATTTGG+GGG + chr3.4:87129621-87129640 MS.gene013318:intron 15.0%
!! AAAGAAATAAATTAAGAAGC+AGG + chr3.4:87129946-87129965 MS.gene013318:intron 20.0%
!! AGCAAAAAAAAATGAGAAAT+CGG + chr3.4:87128950-87128969 MS.gene013318:intron 20.0%
!! ATATGTCAATAATCAAAAAC+TGG - chr3.4:87127159-87127178 None:intergenic 20.0%
!! ATGAAAGTTTGTAAATTAGT+TGG + chr3.4:87129913-87129932 MS.gene013318:intron 20.0%
!! TACTTTCTACACATATTTAT+AGG - chr3.4:87129015-87129034 None:intergenic 20.0%
!! TTTGACTAACCATTAAAAAT+TGG + chr3.4:87130061-87130080 MS.gene013318:intron 20.0%
!!! AATTTTTAATGGTTAGTCAA+AGG - chr3.4:87130062-87130081 None:intergenic 20.0%
!!! ATCTCATTTGGAATTAAATA+AGG - chr3.4:87130326-87130345 None:intergenic 20.0%
!!! ATTTTTAATGGTTAGTCAAA+GGG - chr3.4:87130061-87130080 None:intergenic 20.0%
!!! TATTGTATTCTGCATTTTTT+GGG + chr3.4:87129494-87129513 MS.gene013318:intron 20.0%
!!! TATTTGTTTTTTTGGAAACT+TGG + chr3.4:87127753-87127772 MS.gene013318:intron 20.0%
!!! TGCTTCTTAATTTATTTCTT+TGG - chr3.4:87129947-87129966 None:intergenic 20.0%
! AAACTTTCATTTGCACAAAA+GGG - chr3.4:87129903-87129922 None:intergenic 25.0%
! ACTAACCATTAAAAATTGGA+AGG + chr3.4:87130065-87130084 MS.gene013318:intron 25.0%
! GAGGAATTATGTTTATCAAT+TGG + chr3.4:87127032-87127051 MS.gene013318:intron 25.0%
! GTACAAAATTCTTATGCATT+AGG + chr3.4:87129146-87129165 MS.gene013318:intron 25.0%
! TTACAAAGATAACAAAGAGA+AGG - chr3.4:87129318-87129337 None:intergenic 25.0%
! TTATATAAAACATCACACTC+TGG + chr3.4:87128794-87128813 MS.gene013318:intron 25.0%
!! AAACAAAATTGATGATTCCA+GGG + chr3.4:87126470-87126489 MS.gene013318:CDS 25.0%
!! AATTCCAAATGAGATTTTTG+AGG + chr3.4:87130331-87130350 MS.gene013318:CDS 25.0%
!! TGTCATTTACTTCAGAAATA+TGG - chr3.4:87128383-87128402 None:intergenic 25.0%
!!! CAAAAGTATTCTCTCAAAAA+AGG + chr3.4:87127944-87127963 MS.gene013318:intron 25.0%
!!! GTATTGTATTCTGCATTTTT+TGG + chr3.4:87129493-87129512 MS.gene013318:intron 25.0%
!!! TGCATTTTTTGGGTATATTT+TGG + chr3.4:87129504-87129523 MS.gene013318:intron 25.0%
!!! TGGAATCATCAATTTTGTTT+CGG - chr3.4:87126470-87126489 None:intergenic 25.0%
!!! TTCTCATTTTTTTTTGCTAC+AGG - chr3.4:87128948-87128967 None:intergenic 25.0%
!!! TTTTTAATGGTTAGTCAAAG+GGG - chr3.4:87130060-87130079 None:intergenic 25.0%
!!! TTTTTTTTACGCCCTATTTT+TGG + chr3.4:87129284-87129303 MS.gene013318:intron 25.0%
AAATACCCTACAAATCACAT+AGG - chr3.4:87128211-87128230 None:intergenic 30.0%
AACAAAAGAGACAGTAAGAT+TGG - chr3.4:87129986-87130005 None:intergenic 30.0%
AACCATTTAATGAGAAAGAC+TGG + chr3.4:87128274-87128293 MS.gene013318:CDS 30.0%
AACTTTCATTTGCACAAAAG+GGG - chr3.4:87129902-87129921 None:intergenic 30.0%
ACAAATGTCCAATGTTCTAA+TGG - chr3.4:87129588-87129607 None:intergenic 30.0%
ACACATATTTATAGGTCATG+TGG - chr3.4:87129007-87129026 None:intergenic 30.0%
ACCATTTAATGAGAAAGACT+GGG + chr3.4:87128275-87128294 MS.gene013318:CDS 30.0%
ACTTGGTATATTCTTAGTCT+GGG + chr3.4:87128099-87128118 MS.gene013318:intron 30.0%
AGAACAGTTAAGATAAAACC+AGG - chr3.4:87128163-87128182 None:intergenic 30.0%
ATAAACGAAAAGCTATTTGC+TGG + chr3.4:87130431-87130450 MS.gene013318:CDS 30.0%
ATAGGAAACTAAGACAAAAG+AGG - chr3.4:87129557-87129576 None:intergenic 30.0%
CAAACTTTCATTTGCACAAA+AGG - chr3.4:87129904-87129923 None:intergenic 30.0%
CACATATTTATAGGTCATGT+GGG - chr3.4:87129006-87129025 None:intergenic 30.0%
CTTTCTATCAGTTTGATCAT+TGG + chr3.4:87129438-87129457 MS.gene013318:intron 30.0%
GACAAAGCTGTTTATATCAA+AGG - chr3.4:87127347-87127366 None:intergenic 30.0%
GATTGAACATAAGAATCAAG+TGG + chr3.4:87126870-87126889 MS.gene013318:CDS 30.0%
TAATGTATCCATTGTGTGTA+TGG + chr3.4:87127403-87127422 MS.gene013318:intron 30.0%
TAGTCTAACATTCATTACCT+AGG - chr3.4:87129751-87129770 None:intergenic 30.0%
TCTTGATAGACATGATAAAG+AGG - chr3.4:87128439-87128458 None:intergenic 30.0%
TGCAATATTTCTTTCCAACA+GGG - chr3.4:87126786-87126805 None:intergenic 30.0%
TGTTGGAAAGAAATATTGCA+CGG + chr3.4:87126786-87126805 MS.gene013318:CDS 30.0%
TTTGATCCTACTAATCAAGA+TGG + chr3.4:87130106-87130125 MS.gene013318:intron 30.0%
! ATGTATCACGTGTTATTAGA+AGG + chr3.4:87129206-87129225 MS.gene013318:intron 30.0%
! CCAACAAAAGCTGTAATTTT+AGG - chr3.4:87127189-87127208 None:intergenic 30.0%
! CCTAAAATTACAGCTTTTGT+TGG + chr3.4:87127186-87127205 MS.gene013318:intron 30.0%
! CTTTGAAAAAAATGGAAGGA+TGG + chr3.4:87127675-87127694 MS.gene013318:intron 30.0%
! GAAACAAAATTGATGATTCC+AGG + chr3.4:87126469-87126488 MS.gene013318:CDS 30.0%
! GATTTGTAGGGTATTTCAAA+AGG + chr3.4:87128215-87128234 MS.gene013318:CDS 30.0%
! TTCAGCCTTCCAATTTTTAA+TGG - chr3.4:87130073-87130092 None:intergenic 30.0%
! TTTCTCAAGAGGAAGATTTT+GGG + chr3.4:87126532-87126551 MS.gene013318:CDS 30.0%
! TTTTCTCAAGAGGAAGATTT+TGG + chr3.4:87126531-87126550 MS.gene013318:CDS 30.0%
!! ATTTTCATCTTTTTGGCCAT+AGG - chr3.4:87130408-87130427 None:intergenic 30.0%
!! CTTACTGTCTCTTTTGTTTA+GGG + chr3.4:87129988-87130007 MS.gene013318:intron 30.0%
!! GTTTTAAGCTTTTTGTCTGT+CGG + chr3.4:87126648-87126667 MS.gene013318:intron 30.0%
!! TCTTACTGTCTCTTTTGTTT+AGG + chr3.4:87129987-87130006 MS.gene013318:intron 30.0%
!! TGGTAATGTATTTTCTCAAG+AGG + chr3.4:87126521-87126540 MS.gene013318:CDS 30.0%
!!! ATTGTATTGGAGGAGTATTT+TGG + chr3.4:87127825-87127844 MS.gene013318:intron 30.0%
!!! TAGGAACAATTTTTTCCCAA+AGG + chr3.4:87127605-87127624 MS.gene013318:intron 30.0%
!!! TTTTTTGGAAACTTGGTATC+CGG + chr3.4:87127760-87127779 MS.gene013318:intron 30.0%
!!! TTTTTTTCTGATTGTTCTCC+TGG + chr3.4:87128142-87128161 MS.gene013318:intron 30.0%
AAAAAAATGGAAGGATGGAG+TGG + chr3.4:87127680-87127699 MS.gene013318:intron 35.0%
AAATGACTGTTCACCAGAAA+TGG - chr3.4:87129267-87129286 None:intergenic 35.0%
AACATAAGAATCAAGTGGTG+GGG + chr3.4:87126875-87126894 MS.gene013318:CDS 35.0%
AAGATAACAAAGAGAAGGAG+AGG - chr3.4:87129313-87129332 None:intergenic 35.0%
AAGCAACTCAAAGAAATCAG+GGG - chr3.4:87130480-87130499 None:intergenic 35.0%
ACATTTACAAGTATGCTCCA+TGG + chr3.4:87126590-87126609 MS.gene013318:CDS 35.0%
AGGTCCTCAAAAATCTCATT+TGG - chr3.4:87130338-87130357 None:intergenic 35.0%
AGTAACATCCATACACACAA+TGG - chr3.4:87127414-87127433 None:intergenic 35.0%
AGTCTTAACAGTAGCATAAG+TGG - chr3.4:87129404-87129423 None:intergenic 35.0%
AGTTCAGCAATGACATGAAA+AGG - chr3.4:87126568-87126587 None:intergenic 35.0%
ATATGACTACCTCCAATATC+TGG + chr3.4:87129234-87129253 MS.gene013318:intron 35.0%
ATGTGATTATGTTCGACAGA+AGG + chr3.4:87130262-87130281 MS.gene013318:intron 35.0%
CAAGCAACTCAAAGAAATCA+GGG - chr3.4:87130481-87130500 None:intergenic 35.0%
CATGAATCATTTACAGCTTG+AGG - chr3.4:87127250-87127269 None:intergenic 35.0%
CATTTACAAGTATGCTCCAT+GGG + chr3.4:87126591-87126610 MS.gene013318:CDS 35.0%
CCTAAAGAGGACTTGTATTA+GGG + chr3.4:87128039-87128058 MS.gene013318:intron 35.0%
CCTAATACAAGTCCTCTTTA+GGG - chr3.4:87128041-87128060 None:intergenic 35.0%
CTCAAGCTGTAAATGATTCA+TGG + chr3.4:87127248-87127267 MS.gene013318:intron 35.0%
CTTCGTTGTTATATTGGACT+TGG + chr3.4:87129849-87129868 MS.gene013318:intron 35.0%
GAACATAAGAATCAAGTGGT+GGG + chr3.4:87126874-87126893 MS.gene013318:CDS 35.0%
GAATGAAAACAATGGATCTG+AGG + chr3.4:87128563-87128582 MS.gene013318:CDS 35.0%
GAGGTTAACATGAAAACACA+TGG - chr3.4:87127231-87127250 None:intergenic 35.0%
GATAAATCTTTGCTCAAGAG+TGG + chr3.4:87126736-87126755 MS.gene013318:intron 35.0%
GCAATATTTCTTTCCAACAG+GGG - chr3.4:87126785-87126804 None:intergenic 35.0%
GTGCAATATTTCTTTCCAAC+AGG - chr3.4:87126787-87126806 None:intergenic 35.0%
GTTCAGCAATGACATGAAAA+GGG - chr3.4:87126567-87126586 None:intergenic 35.0%
GTTGGAAAGAAATATTGCAC+GGG + chr3.4:87126787-87126806 MS.gene013318:CDS 35.0%
TATTAACAGCTTGGTTGGAT+TGG + chr3.4:87130364-87130383 MS.gene013318:CDS 35.0%
TCAAGCAACTCAAAGAAATC+AGG - chr3.4:87130482-87130501 None:intergenic 35.0%
TCCCAGTCTTTCTCATTAAA+TGG - chr3.4:87128279-87128298 None:intergenic 35.0%
TGAACATAAGAATCAAGTGG+TGG + chr3.4:87126873-87126892 MS.gene013318:CDS 35.0%
TGCAAGTGCAATTAATCAGA+AGG - chr3.4:87129681-87129700 None:intergenic 35.0%
TGCTATCTTTCATTTGCTCT+CGG + chr3.4:87129349-87129368 MS.gene013318:intron 35.0%
TGTCTGCTTCGTTGTTATAT+TGG + chr3.4:87129843-87129862 MS.gene013318:intron 35.0%
TTAAATGTTCTACATGGCCT+AGG + chr3.4:87129731-87129750 MS.gene013318:intron 35.0%
TTTCGACGATGAAAATGCAT+TGG + chr3.4:87128536-87128555 MS.gene013318:CDS 35.0%
! AACTAAACCCCTCCTATTTT+GGG + chr3.4:87127793-87127812 MS.gene013318:intron 35.0%
! AATTTGAGTTCCCCCAAAAT+AGG - chr3.4:87127808-87127827 None:intergenic 35.0%
! AGAACTCCTATGTGATTTGT+AGG + chr3.4:87128202-87128221 MS.gene013318:intron 35.0%
! AGATCCATTGTTTTCATTCC+CGG - chr3.4:87128562-87128581 None:intergenic 35.0%
! GAACTCCTATGTGATTTGTA+GGG + chr3.4:87128203-87128222 MS.gene013318:intron 35.0%
! GACTTGGTATATTCTTAGTC+TGG + chr3.4:87128098-87128117 MS.gene013318:intron 35.0%
! GCACTTTTAGTGTTATGCAA+GGG + chr3.4:87128857-87128876 MS.gene013318:intron 35.0%
! TGTAGGGTATTTCAAAAGGA+AGG + chr3.4:87128219-87128238 MS.gene013318:CDS 35.0%
! TTATAGGTCATGTGGGTTTT+GGG - chr3.4:87128999-87129018 None:intergenic 35.0%
! TTTATAGGTCATGTGGGTTT+TGG - chr3.4:87129000-87129019 None:intergenic 35.0%
!! AAATGAGATTTTTGAGGACC+TGG + chr3.4:87130337-87130356 MS.gene013318:CDS 35.0%
!! AATGAGATTTTTGAGGACCT+GGG + chr3.4:87130338-87130357 MS.gene013318:CDS 35.0%
!! AGGGCTTTGAAAAAAATGGA+AGG + chr3.4:87127671-87127690 MS.gene013318:intron 35.0%
!! TCATTGGTCTTAACATATGC+TGG + chr3.4:87129454-87129473 MS.gene013318:intron 35.0%
!! TGTTTTGTTGGATGTACGTA+TGG + chr3.4:87127063-87127082 MS.gene013318:intron 35.0%
!!! ATTTTTTCCCAAAGGTCTGT+TGG + chr3.4:87127613-87127632 MS.gene013318:intron 35.0%
!!! TATTGGAGGAGTATTTTGGA+GGG + chr3.4:87127829-87127848 MS.gene013318:intron 35.0%
!!! TTGACTGTTTTAGCATGACT+TGG + chr3.4:87128082-87128101 MS.gene013318:intron 35.0%
!!! TTTTTTCCCAAAGGTCTGTT+GGG + chr3.4:87127614-87127633 MS.gene013318:intron 35.0%
AAAAAGAGGAACAGTTCACG+AGG - chr3.4:87128738-87128757 None:intergenic 40.0%
AAAAATTTGGGGGCAAGAAG+TGG + chr3.4:87129631-87129650 MS.gene013318:intron 40.0%
AAAGTCAGAGCTACCAAAGT+TGG - chr3.4:87128647-87128666 None:intergenic 40.0%
AAGGAGAGGTTGCCAAAAAT+AGG - chr3.4:87129299-87129318 None:intergenic 40.0%
AAGTCAGAGCTACCAAAGTT+GGG - chr3.4:87128646-87128665 None:intergenic 40.0%
AATGGAAGCTTGCCAGATAT+TGG - chr3.4:87129249-87129268 None:intergenic 40.0%
ACCAATCTCATCACCAACAA+TGG + chr3.4:87128905-87128924 MS.gene013318:intron 40.0%
ACTCACTCCAAAGTGATTAG+TGG + chr3.4:87129705-87129724 MS.gene013318:intron 40.0%
AGCAACTCAAAGAAATCAGG+GGG - chr3.4:87130479-87130498 None:intergenic 40.0%
AGGAGAGGTTGCCAAAAATA+GGG - chr3.4:87129298-87129317 None:intergenic 40.0%
AGGTACGACATCTTTGAATG+AGG + chr3.4:87127013-87127032 MS.gene013318:intron 40.0%
AGTTTCGTTGAATCCAAACC+TGG - chr3.4:87126622-87126641 None:intergenic 40.0%
ATCGTCGAAAATAGCAAGCA+TGG - chr3.4:87128526-87128545 None:intergenic 40.0%
ATTACCAGCTCAACATCAGT+GGG - chr3.4:87126508-87126527 None:intergenic 40.0%
ATTCAAAGATGTCGTACCTG+TGG - chr3.4:87127012-87127031 None:intergenic 40.0%
CAAAATAGGAGGGGTTTAGT+TGG - chr3.4:87127794-87127813 None:intergenic 40.0%
CATGCATAACCCAATCAGTT+CGG - chr3.4:87126948-87126967 None:intergenic 40.0%
CCCTAAAGAGGACTTGTATT+AGG + chr3.4:87128038-87128057 MS.gene013318:intron 40.0%
CCCTAATACAAGTCCTCTTT+AGG - chr3.4:87128042-87128061 None:intergenic 40.0%
CGTTGTTATATTGGACTTGG+TGG + chr3.4:87129852-87129871 MS.gene013318:intron 40.0%
CTCACTCCAAAGTGATTAGT+GGG + chr3.4:87129706-87129725 MS.gene013318:intron 40.0%
GAAAGAAATATTGCACGGGA+GGG + chr3.4:87126791-87126810 MS.gene013318:CDS 40.0%
GAGAGCAAATGAAAGATAGC+AGG - chr3.4:87129350-87129369 None:intergenic 40.0%
GATGTACGTATGGCGTTTAA+TGG + chr3.4:87127073-87127092 MS.gene013318:intron 40.0%
GGAAACTAAGACAAAAGAGG+CGG - chr3.4:87129554-87129573 None:intergenic 40.0%
GGACAGTGAGAGTAATAAGA+TGG - chr3.4:87127326-87127345 None:intergenic 40.0%
GGAGATATTAACAGCTTGGT+TGG + chr3.4:87130359-87130378 MS.gene013318:CDS 40.0%
GGGAACTCAAATTGTATTGG+AGG + chr3.4:87127815-87127834 MS.gene013318:intron 40.0%
GTATTTCAAAAGGAAGGTCC+TGG + chr3.4:87128225-87128244 MS.gene013318:CDS 40.0%
TAAAGGAGACCGAACTGATT+GGG + chr3.4:87126936-87126955 MS.gene013318:CDS 40.0%
TCACTCCAAAGTGATTAGTG+GGG + chr3.4:87129707-87129726 MS.gene013318:intron 40.0%
TCAGAAATATGGCTTGAGCT+AGG - chr3.4:87128372-87128391 None:intergenic 40.0%
TCCAATGTTCTAATGGCAGA+TGG - chr3.4:87129581-87129600 None:intergenic 40.0%
TGCTGAATTGCATGACACAT+TGG + chr3.4:87128835-87128854 MS.gene013318:intron 40.0%
TGGCTTTCACGTGTAACAAA+GGG - chr3.4:87127139-87127158 None:intergenic 40.0%
TGGGGCTTAAATGTTCTACA+TGG + chr3.4:87129725-87129744 MS.gene013318:intron 40.0%
TGGGGGAACTCAAATTGTAT+TGG + chr3.4:87127812-87127831 MS.gene013318:intron 40.0%
TGTTTAGTCTGCCAGGATAA+TGG - chr3.4:87130515-87130534 None:intergenic 40.0%
TTAAGCCCCACTAATCACTT+TGG - chr3.4:87129715-87129734 None:intergenic 40.0%
! AAGGAATGAAGAGGTTTGGT+AGG + chr3.4:87127703-87127722 MS.gene013318:intron 40.0%
! ACTAAACCCCTCCTATTTTG+GGG + chr3.4:87127794-87127813 MS.gene013318:intron 40.0%
! AGGAATGAAGAGGTTTGGTA+GGG + chr3.4:87127704-87127723 MS.gene013318:intron 40.0%
! CAACTAAACCCCTCCTATTT+TGG + chr3.4:87127792-87127811 MS.gene013318:intron 40.0%
! GGCACTTTTAGTGTTATGCA+AGG + chr3.4:87128856-87128875 MS.gene013318:intron 40.0%
! TCAAGAGTGGTGATTTGCAA+TGG + chr3.4:87126749-87126768 MS.gene013318:CDS 40.0%
! TTGGTTGCGAACTGTTTTGT+TGG + chr3.4:87127051-87127070 MS.gene013318:intron 40.0%
! TTTTTCCCAAAGGTCTGTTG+GGG + chr3.4:87127615-87127634 MS.gene013318:intron 40.0%
!! ACTGTCTCTTTTGTTTAGGG+AGG + chr3.4:87129991-87130010 MS.gene013318:intron 40.0%
!! CTGTCTCTTTTGTTTAGGGA+GGG + chr3.4:87129992-87130011 MS.gene013318:intron 40.0%
!! GGAGAGGGCTTTGAAAAAAA+TGG + chr3.4:87127667-87127686 MS.gene013318:intron 40.0%
!!! AGGAGTATTTTGGAGGGTTT+TGG + chr3.4:87127835-87127854 MS.gene013318:intron 40.0%
!!! GTATTGGAGGAGTATTTTGG+AGG + chr3.4:87127828-87127847 MS.gene013318:intron 40.0%
AAATGGAAGGATGGAGTGGA+AGG + chr3.4:87127684-87127703 MS.gene013318:intron 45.0%
AGAAATCGGATCATGAGCCA+TGG + chr3.4:87128964-87128983 MS.gene013318:intron 45.0%
AGCAAGAATGGTAACCACCA+TGG - chr3.4:87128883-87128902 None:intergenic 45.0%
AGTCAGAGCTACCAAAGTTG+GGG - chr3.4:87128645-87128664 None:intergenic 45.0%
ATCTGGCAAGCTTCCATTTC+TGG + chr3.4:87129251-87129270 MS.gene013318:intron 45.0%
ATGAATCGGGCAACAGAAGT+AGG + chr3.4:87126817-87126836 MS.gene013318:CDS 45.0%
ATGGAGTGGAAGGAATGAAG+AGG + chr3.4:87127694-87127713 MS.gene013318:intron 45.0%
CAATCAGTTCGGTCTCCTTT+AGG - chr3.4:87126937-87126956 None:intergenic 45.0%
CATCTGAACAGACCCTAAAG+AGG + chr3.4:87128026-87128045 MS.gene013318:intron 45.0%
CATTACCAGCTCAACATCAG+TGG - chr3.4:87126509-87126528 None:intergenic 45.0%
CCAAGCTGTTAATATCTCCC+AGG - chr3.4:87130358-87130377 None:intergenic 45.0%
CCAATACATCCACTTGCAGA+GGG - chr3.4:87128411-87128430 None:intergenic 45.0%
CCTACTAATCAAGATGGCAG+AGG + chr3.4:87130112-87130131 MS.gene013318:intron 45.0%
CCTCTGCCATCTTGATTAGT+AGG - chr3.4:87130115-87130134 None:intergenic 45.0%
CCTGGGAGATATTAACAGCT+TGG + chr3.4:87130355-87130374 MS.gene013318:CDS 45.0%
CTAAAGGAGACCGAACTGAT+TGG + chr3.4:87126935-87126954 MS.gene013318:CDS 45.0%
CTATCAAGATTGATGCCCTC+TGG + chr3.4:87128450-87128469 MS.gene013318:CDS 45.0%
CTTGATTGCCTAGAGCTGAA+GGG - chr3.4:87128485-87128504 None:intergenic 45.0%
GACAAAGACCTAGCTGACAA+TGG + chr3.4:87126982-87127001 MS.gene013318:CDS 45.0%
GCAACTCAAAGAAATCAGGG+GGG - chr3.4:87130478-87130497 None:intergenic 45.0%
GCCATCTGCCATTAGAACAT+TGG + chr3.4:87129577-87129596 MS.gene013318:intron 45.0%
GGAAAGAAATATTGCACGGG+AGG + chr3.4:87126790-87126809 MS.gene013318:CDS 45.0%
GGTCTGTTCAGATGTTTCGA+GGG - chr3.4:87128020-87128039 None:intergenic 45.0%
GTCTGTTCAGATGTTTCGAG+GGG - chr3.4:87128019-87128038 None:intergenic 45.0%
GTGGAAGGAATGAAGAGGTT+TGG + chr3.4:87127699-87127718 MS.gene013318:intron 45.0%
GTTCTAATGGCAGATGGCAT+AGG - chr3.4:87129575-87129594 None:intergenic 45.0%
TCCAATACATCCACTTGCAG+AGG - chr3.4:87128412-87128431 None:intergenic 45.0%
TCCTGGCAGACTAAACATGA+TGG + chr3.4:87130518-87130537 MS.gene013318:CDS 45.0%
TGAATCGGGCAACAGAAGTA+GGG + chr3.4:87126818-87126837 MS.gene013318:CDS 45.0%
TGAGATTGGTGCAGCAAGAA+TGG - chr3.4:87128895-87128914 None:intergenic 45.0%
TGAGTTCCCCCAAAATAGGA+GGG - chr3.4:87127804-87127823 None:intergenic 45.0%
TGGTACTTCTTTACCCCTGT+TGG + chr3.4:87126769-87126788 MS.gene013318:CDS 45.0%
TTACCAGCTCAACATCAGTG+GGG - chr3.4:87126507-87126526 None:intergenic 45.0%
TTAGTGTTATGCAAGGGCCA+TGG + chr3.4:87128863-87128882 MS.gene013318:intron 45.0%
TTGAGTTCCCCCAAAATAGG+AGG - chr3.4:87127805-87127824 None:intergenic 45.0%
TTGGCCGGGAATGAAAACAA+TGG + chr3.4:87128555-87128574 MS.gene013318:CDS 45.0%
TTGGGGGCTTATGGAGTTAT+GGG + chr3.4:87127632-87127651 MS.gene013318:intron 45.0%
TTTGCACAAAAGGGGTAGCA+AGG - chr3.4:87129894-87129913 None:intergenic 45.0%
TTTGCCAGTGTGAAACACCA+GGG - chr3.4:87126911-87126930 None:intergenic 45.0%
! AAGCACGCACGAAGTATCTA+CGG - chr3.4:87127274-87127293 None:intergenic 45.0%
! ACATATGCTGGCAGTGCTTT+TGG + chr3.4:87129466-87129485 MS.gene013318:intron 45.0%
! ACGATGAAAATGCATTGGCC+GGG + chr3.4:87128541-87128560 MS.gene013318:CDS 45.0%
! AGCTTGGTTGGATTGGATGA+TGG + chr3.4:87130371-87130390 MS.gene013318:CDS 45.0%
! CGTGCTTACATAGCATTGAG+TGG + chr3.4:87127287-87127306 MS.gene013318:intron 45.0%
! CTGGCTTTCACGTGTAACAA+AGG - chr3.4:87127140-87127159 None:intergenic 45.0%
! GACGATGAAAATGCATTGGC+CGG + chr3.4:87128540-87128559 MS.gene013318:CDS 45.0%
! GATGGAAGCGGTTTTTCCTA+TGG + chr3.4:87130389-87130408 MS.gene013318:CDS 45.0%
! GGAATGAAGAGGTTTGGTAG+GGG + chr3.4:87127705-87127724 MS.gene013318:intron 45.0%
! TTTTCCCAAAGGTCTGTTGG+GGG + chr3.4:87127616-87127635 MS.gene013318:intron 45.0%
! TTTTCCTGCCTTCGACTAGA+AGG - chr3.4:87129657-87129676 None:intergenic 45.0%
!! CAGTAGCATAAGTGGACTAG+TGG - chr3.4:87129396-87129415 None:intergenic 45.0%
!! CGACAGAAGGTTGATAATCC+TGG + chr3.4:87130275-87130294 MS.gene013318:intron 45.0%
!! CTAAACCCCTCCTATTTTGG+GGG + chr3.4:87127795-87127814 MS.gene013318:intron 45.0%
!! CTTTGAGTTGCTTGACCTAG+AGG + chr3.4:87130487-87130506 MS.gene013318:CDS 45.0%
!! CTTTTGTTTAGGGAGGGTGA+AGG + chr3.4:87129998-87130017 MS.gene013318:intron 45.0%
!! GCCATTGTTGGTGATGAGAT+TGG - chr3.4:87128909-87128928 None:intergenic 45.0%
!! GTTGGATTGGATGATGGAAG+CGG + chr3.4:87130377-87130396 MS.gene013318:CDS 45.0%
!! TAGCATAAGTGGACTAGTGG+AGG - chr3.4:87129393-87129412 None:intergenic 45.0%
!! TAGGGTACTGGAAGACTACA+GGG + chr3.4:87126836-87126855 MS.gene013318:CDS 45.0%
!! AATTATTATTAGTATTAATA+AGG + chr3.4:87127526-87127545 MS.gene013318:intron 5.0%
!! ATTATTATTAGTATTAATAA+GGG + chr3.4:87127527-87127546 MS.gene013318:intron 5.0%
!!! ATATTTTTGTTAAAAAAATT+TGG + chr3.4:87129618-87129637 MS.gene013318:intron 5.0%
!!! TATTTTTGTTAAAAAAATTT+GGG + chr3.4:87129619-87129638 MS.gene013318:intron 5.0%
AAAGGTCTGTTGGGGGCTTA+TGG + chr3.4:87127623-87127642 MS.gene013318:intron 50.0%
AGAAATATTGCACGGGAGGG+AGG + chr3.4:87126794-87126813 MS.gene013318:CDS 50.0%
AGAACCCTGGTGTTTCACAC+TGG + chr3.4:87126904-87126923 MS.gene013318:CDS 50.0%
AGAAGTGGCCTTCTAGTCGA+AGG + chr3.4:87129646-87129665 MS.gene013318:intron 50.0%
AGCTGACAATGGTGTTCCAC+AGG + chr3.4:87126993-87127012 MS.gene013318:CDS 50.0%
ATAAGCCCCCAACAGACCTT+TGG - chr3.4:87127624-87127643 None:intergenic 50.0%
CAATCTGCCATCGCCATTGT+TGG - chr3.4:87128921-87128940 None:intergenic 50.0%
CACACTGGCAAAGCTCCTAA+AGG + chr3.4:87126919-87126938 MS.gene013318:CDS 50.0%
CCATACTGTGCACCATTCCT+GGG - chr3.4:87128252-87128271 None:intergenic 50.0%
CCCTCTGCAAGTGGATGTAT+TGG + chr3.4:87128408-87128427 MS.gene013318:CDS 50.0%
CTCATCACCAACAATGGCGA+TGG + chr3.4:87128911-87128930 MS.gene013318:intron 50.0%
CTTATGGAGTTATGGGGGAG+GGG + chr3.4:87127639-87127658 MS.gene013318:intron 50.0%
CTTTGCCAGTGTGAAACACC+AGG - chr3.4:87126912-87126931 None:intergenic 50.0%
GAAAGACTGGGATAGCGAAG+AGG + chr3.4:87128287-87128306 MS.gene013318:CDS 50.0%
GAGCTAGGTAGAATGAGAGC+TGG - chr3.4:87128357-87128376 None:intergenic 50.0%
GAGGGGTTTAGTTGGTCCTT+GGG - chr3.4:87127786-87127805 None:intergenic 50.0%
GAGTTCCCCCAAAATAGGAG+GGG - chr3.4:87127803-87127822 None:intergenic 50.0%
GCCATCATGTTTAGTCTGCC+AGG - chr3.4:87130522-87130541 None:intergenic 50.0%
GCTTATGGAGTTATGGGGGA+GGG + chr3.4:87127638-87127657 MS.gene013318:intron 50.0%
GCTTGATTGCCTAGAGCTGA+AGG - chr3.4:87128486-87128505 None:intergenic 50.0%
GGAAGACTACAGGGAAGGAT+AGG + chr3.4:87126845-87126864 MS.gene013318:CDS 50.0%
GGAAGCTTGCCAGATATTGG+AGG - chr3.4:87129246-87129265 None:intergenic 50.0%
GGGTCTGTTCAGATGTTTCG+AGG - chr3.4:87128021-87128040 None:intergenic 50.0%
GGTCAAGCAAACAACGCTGA+AGG + chr3.4:87130296-87130315 MS.gene013318:CDS 50.0%
GTACTGGAAGACTACAGGGA+AGG + chr3.4:87126840-87126859 MS.gene013318:CDS 50.0%
GTGGAACACCATTGTCAGCT+AGG - chr3.4:87126993-87127012 None:intergenic 50.0%
GTTGGGGGCTTATGGAGTTA+TGG + chr3.4:87127631-87127650 MS.gene013318:intron 50.0%
TAAGCCCCCAACAGACCTTT+GGG - chr3.4:87127623-87127642 None:intergenic 50.0%
TATGCTCCATGGGATCTACC+AGG + chr3.4:87126601-87126620 MS.gene013318:CDS 50.0%
TCAGCGTTGTTTGCTTGACC+AGG - chr3.4:87130296-87130315 None:intergenic 50.0%
TCCAAACCTGGTAGATCCCA+TGG - chr3.4:87126610-87126629 None:intergenic 50.0%
TCCATACTGTGCACCATTCC+TGG - chr3.4:87128253-87128272 None:intergenic 50.0%
TCCATGGGATCTACCAGGTT+TGG + chr3.4:87126606-87126625 MS.gene013318:intron 50.0%
TGGGGGCTTATGGAGTTATG+GGG + chr3.4:87127633-87127652 MS.gene013318:intron 50.0%
TTCAGATGTTTCGAGGGGAG+AGG - chr3.4:87128014-87128033 None:intergenic 50.0%
! ATGAAGAGGTTTGGTAGGGG+AGG + chr3.4:87127708-87127727 MS.gene013318:intron 50.0%
! TGAAGAGGTTTGGTAGGGGA+GGG + chr3.4:87127709-87127728 MS.gene013318:intron 50.0%
!! ACCTAGAGGTGCCATTATCC+TGG + chr3.4:87130501-87130520 MS.gene013318:CDS 50.0%
!! GTAGGGTACTGGAAGACTAC+AGG + chr3.4:87126835-87126854 MS.gene013318:CDS 50.0%
!! GTTTTGGGTCTGTCTAGCCA+TGG - chr3.4:87128984-87129003 None:intergenic 50.0%
!! TACCAAAGTTGGGGAGCATC+TGG - chr3.4:87128636-87128655 None:intergenic 50.0%
AAAAGGAAGGTCCTGGTCCC+AGG + chr3.4:87128232-87128251 MS.gene013318:CDS 55.0%
ACGACACACCCTTCAGCTCT+AGG + chr3.4:87128474-87128493 MS.gene013318:CDS 55.0%
CCCAGGAATGGTGCACAGTA+TGG + chr3.4:87128249-87128268 MS.gene013318:CDS 55.0%
GAAACTTGGTATCCGGCCCA+AGG + chr3.4:87127767-87127786 MS.gene013318:intron 55.0%
GACATGCATCCCTCTGCAAG+TGG + chr3.4:87128399-87128418 MS.gene013318:CDS 55.0%
GATGTTTCGAGGGGAGAGGA+TGG - chr3.4:87128010-87128029 None:intergenic 55.0%
GGAGGGGTTTAGTTGGTCCT+TGG - chr3.4:87127787-87127806 None:intergenic 55.0%
GGCTTATGGAGTTATGGGGG+AGG + chr3.4:87127637-87127656 MS.gene013318:intron 55.0%
GGGCAACAGAAGTAGGGTAC+TGG + chr3.4:87126824-87126843 MS.gene013318:CDS 55.0%
GGGGGCTTATGGAGTTATGG+GGG + chr3.4:87127634-87127653 MS.gene013318:intron 55.0%
GGTGGGGATGATAAGAACCC+TGG + chr3.4:87126891-87126910 MS.gene013318:CDS 55.0%
GGTTTAGTTGGTCCTTGGGC+CGG - chr3.4:87127782-87127801 None:intergenic 55.0%
GTGCAGACACAGCAGCAACA+GGG - chr3.4:87128335-87128354 None:intergenic 55.0%
GTGGGGTGAAAACGAAACCC+TGG - chr3.4:87126490-87126509 None:intergenic 55.0%
GTGTTATGCAAGGGCCATGG+TGG + chr3.4:87128866-87128885 MS.gene013318:intron 55.0%
GTTTGGTAGGGGAGGGCTTT+GGG + chr3.4:87127716-87127735 MS.gene013318:intron 55.0%
TCACCCCACTGATGTTGAGC+TGG + chr3.4:87126501-87126520 MS.gene013318:CDS 55.0%
TGCCAGATGCTCCCCAACTT+TGG + chr3.4:87128631-87128650 MS.gene013318:intron 55.0%
TTTGGTAGGGGAGGGCTTTG+GGG + chr3.4:87127717-87127736 MS.gene013318:intron 55.0%
! GCCAGGATAATGGCACCTCT+AGG - chr3.4:87130505-87130524 None:intergenic 55.0%
AGTTATGGGGGAGGGGAGAG+AGG + chr3.4:87127646-87127665 MS.gene013318:intron 60.0%
CACGGGAGGGAGGATGAATC+GGG + chr3.4:87126804-87126823 MS.gene013318:CDS 60.0%
CGAGGGGAGAGGATGGCTTT+GGG - chr3.4:87128003-87128022 None:intergenic 60.0%
GAAGGTCCTGGTCCCAGGAA+TGG + chr3.4:87128237-87128256 MS.gene013318:CDS 60.0%
GCACGGGAGGGAGGATGAAT+CGG + chr3.4:87126803-87126822 MS.gene013318:CDS 60.0%
GGTGCAGACACAGCAGCAAC+AGG - chr3.4:87128336-87128355 None:intergenic 60.0%
GTGGCCTTCTAGTCGAAGGC+AGG + chr3.4:87129650-87129669 MS.gene013318:intron 60.0%
TCGAGGGGAGAGGATGGCTT+TGG - chr3.4:87128004-87128023 None:intergenic 60.0%
TGTGCACCATTCCTGGGACC+AGG - chr3.4:87128246-87128265 None:intergenic 60.0%
! GAAGGGTGTGTCGTGCCAGA+GGG - chr3.4:87128468-87128487 None:intergenic 60.0%
! GGTTTGGTAGGGGAGGGCTT+TGG + chr3.4:87127715-87127734 MS.gene013318:intron 60.0%
! TGAAGGGTGTGTCGTGCCAG+AGG - chr3.4:87128469-87128488 None:intergenic 60.0%
!! GAGAGGATGGCTTTGGGAGC+AGG - chr3.4:87127997-87128016 None:intergenic 60.0%
GGGGGAGGGGAGAGAGGAGA+GGG + chr3.4:87127652-87127671 MS.gene013318:intron 70.0%
TGGGGGAGGGGAGAGAGGAG+AGG + chr3.4:87127651-87127670 MS.gene013318:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 87126463 87130544 87126463 ID=MS.gene013318
chr3.4 mRNA 87126463 87130544 87126463 ID=MS.gene013318.t1;Parent=MS.gene013318
chr3.4 exon 87126463 87126622 87126463 ID=MS.gene013318.t1.exon1;Parent=MS.gene013318.t1
chr3.4 CDS 87126463 87126622 87126463 ID=cds.MS.gene013318.t1;Parent=MS.gene013318.t1
chr3.4 exon 87126737 87127014 87126737 ID=MS.gene013318.t1.exon2;Parent=MS.gene013318.t1
chr3.4 CDS 87126737 87127014 87126737 ID=cds.MS.gene013318.t1;Parent=MS.gene013318.t1
chr3.4 exon 87128204 87128584 87128204 ID=MS.gene013318.t1.exon3;Parent=MS.gene013318.t1
chr3.4 CDS 87128204 87128584 87128204 ID=cds.MS.gene013318.t1;Parent=MS.gene013318.t1
chr3.4 exon 87130281 87130544 87130281 ID=MS.gene013318.t1.exon4;Parent=MS.gene013318.t1
chr3.4 CDS 87130281 87130544 87130281 ID=cds.MS.gene013318.t1;Parent=MS.gene013318.t1
Gene Sequence

>MS.gene013318

ATGGCCGAAACAAAATTGATGATTCCAGGGTTTCGTTTTCACCCCACTGATGTTGAGCTGGTAATGTATTTTCTCAAGAGGAAGATTTTGGGTAGAAAATTCCCTTTTCATGTCATTGCTGAACTTGACATTTACAAGTATGCTCCATGGGATCTACCAGGTTTGGATTCAACGAAACTCGACTAGTTTTAAGCTTTTTGTCTGTCGGTGAAGTATTTTAGTAGTAAGTACATTTGTGTTTCTCTGATGTTTTGTTTATTGTTTTATTTTTCAGATAAATCTTTGCTCAAGAGTGGTGATTTGCAATGGTACTTCTTTACCCCTGTTGGAAAGAAATATTGCACGGGAGGGAGGATGAATCGGGCAACAGAAGTAGGGTACTGGAAGACTACAGGGAAGGATAGGTCGATTGAACATAAGAATCAAGTGGTGGGGATGATAAGAACCCTGGTGTTTCACACTGGCAAAGCTCCTAAAGGAGACCGAACTGATTGGGTTATGCATGAATACAGACTCGAAGACAAAGACCTAGCTGACAATGGTGTTCCACAGGTACGACATCTTTGAATGAGGAATTATGTTTATCAATTGGTTGCGAACTGTTTTGTTGGATGTACGTATGGCGTTTAATGGTCTGTGCACGTGATGTCTAGTACTGTTGCTGCTATTATTGCCCTTTGTTACACGTGAAAGCCAGTTTTTGATTATTGACATATTTCAATACCTAAAATTACAGCTTTTGTTGGATATGACATCATAGTAGAACCATGTGTTTTCATGTTAACCTCAAGCTGTAAATGATTCATGGCCGTAGATACTTCGTGCGTGCTTACATAGCATTGAGTGGCAGCTTTGTTTTGCCATCTTATTACTCTCACTGTCCTTTGATATAAACAGCTTTGTCATTTTCATATATATTAAGAAAAGTAAATAGTGTATTTAATGTATCCATTGTGTGTATGGATGTTACTAAAATGCACTTTTGCGTATAGACATGTCTATCTCTGACATGTTATCTCCCTAAGACAAATTATTATTAGTATTAACAAGGGGCCCTAAGACAAATTATTATTAGTATTAATAAGGGGTATATTAAAAAACTAAAAATAATGTATCTACTAATTTGAAATAAGACTTATATTTAGGAACAATTTTTTCCCAAAGGTCTGTTGGGGGCTTATGGAGTTATGGGGGAGGGGAGAGAGGAGAGGGCTTTGAAAAAAATGGAAGGATGGAGTGGAAGGAATGAAGAGGTTTGGTAGGGGAGGGCTTTGGGGAGTTTATTTCTCTTATTTGTTTTTTTGGAAACTTGGTATCCGGCCCAAGGACCAACTAAACCCCTCCTATTTTGGGGGAACTCAAATTGTATTGGAGGAGTATTTTGGAGGGTTTTGGTAAATTCTTCAAATCAATTCTAAGTTGTTACAATACTCTTAAAATCAGCAATATATTAATCACAAGCAATCATTTATCATTCTATACAAAAGTATTCTCTCAAAAAAGGTGTAACATCTCTCTATTTATTTATTCACCTGCTCCCAAAGCCATCCTCTCCCCTCGAAACATCTGAACAGACCCTAAAGAGGACTTGTATTAGGGACAGCGATAGTACTATGCATTTGACTGTTTTAGCATGACTTGGTATATTCTTAGTCTGGGTTGTTGACTTTCTGTCTCATTTTTTTTCTGATTGTTCTCCTGGTTTTATCTTAACTGTTCTACTGATTTATTTGTATTGCAGAACTCCTATGTGATTTGTAGGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAGTATGGAAAACCATTTAATGAGAAAGACTGGGATAGCGAAGAGGAAATTGATTATGTACAAGCTGTCCCTGTTGCTGCTGTGTCTGCACCAGCTCTCATTCTACCTAGCTCAAGCCATATTTCTGAAGTAAATGACATGCATCCCTCTGCAAGTGGATGTATTGGACTGACCTCTTTATCATGTCTATCAAGATTGATGCCCTCTGGCACGACACACCCTTCAGCTCTAGGCAATCAAGCTGATGATGACATTTTATCCATGCTTGCTATTTTCGACGATGAAAATGCATTGGCCGGGAATGAAAACAATGGATCTGAGGTGTGTAATCTATTTCTTGATATTTATATTTGTTACAACTAACTTGTGCCAGATGCTCCCCAACTTTGGTAGCTCTGACTTTATCTTTCAACATCTTTTTTCTACACTTTTTACCTCAACTTTTTTTATTTTTTTATCTCGTATTTGACTCCTCGTGAACTGTTCCTCTTTTTTTAGTTATCTTTAAAATAGTGAAATTATCGTGTATTTTATATAAAACATCACACTCTGGCTTCATTTGTCAGTCACTTGCTGAATTGCATGACACATTGGCACTTTTAGTGTTATGCAAGGGCCATGGTGGTTACCATTCTTGCTGCACCAATCTCATCACCAACAATGGCGATGGCAGATTGAAAGCCTGTAGCAAAAAAAAATGAGAAATCGGATCATGAGCCATGGCTAGACAGACCCAAAACCCACATGACCTATAAATATGTGTAGAAAGTAGTAAAGAGTATATAGAATACTATCTTGAAATAAAAATATATATTTTAAATAGTCTCATTTTTTAGAATTTTAAATAATGACTAATTAGATTACAGTAAACAGTAATTTATAGTACAAAATTCTTATGCATTAGGATGAAATATGTATAATGTATATAGTATAATACATATAATGTATCACGTGTTATTAGAAGGTCTGTATATGACTACCTCCAATATCTGGCAAGCTTCCATTTCTGGTGAACAGTCATTTTTTTTACGCCCTATTTTTGGCAACCTCTCCTTCTCTTTGTTATCTTTGTAATTCTTCTTTCCTGCTATCTTTCATTTGCTCTCGGTTCTGTTATTATTTTTTTCCTCCACTAGTCCACTTATGCTACTGTTAAGACTTATGATATTATGTGCTTTCTATCAGTTTGATCATTGGTCTTAACATATGCTGGCAGTGCTTTTGGTTTTGTATTGTATTCTGCATTTTTTGGGTATATTTTGGTATATGTGTTCTCTTTTATGATTGCCGCCTCTTTTGTCTTAGTTTCCTATGCCATCTGCCATTAGAACATTGGACATTTGTGTTATACTTTATATTTTTGTTAAAAAAATTTGGGGGCAAGAAGTGGCCTTCTAGTCGAAGGCAGGAAAAGCCTTCTGATTAATTGCACTTGCAATTAACTCACTCCAAAGTGATTAGTGGGGCTTAAATGTTCTACATGGCCTAGGTAATGAATGTTAGACTATGCTGTAGTGTGCATAAGTGTGAGATTAGACATATACTTTCAATAATTTAATGCAATGCTGCATTCTACTTATGTCTGCTTCGTTGTTATATTGGACTTGGTGGTGTCATTTGAGAATATCCTTGCTACCCCTTTTGTGCAAATGAAAGTTTGTAAATTAGTTGGTTAGTTTTCCAAAGAAATAAATTAAGAAGCAGGCATATCATCATTTTCCAATCTTACTGTCTCTTTTGTTTAGGGAGGGTGAAGGTTGTTTATTTTTGAATAGATTTTTGTTTATTAGTTTCCCCTTTGACTAACCATTAAAAATTGGAAGGCTGAATTGCTTAAAAAATTTTGATCCTACTAATCAAGATGGCAGAGGTATTTGTTTTCTTATCTAGAAATGTATTGAGTTTCTTTTCTGTAGATTTTATTTTGTAATATTATGAGTCATAGACAGTTTTAACATGCTTGCTTTAATCTACATCACTTTGCTCATATATGCTAATATGTGATTATGTTCGACAGAAGGTTGATAATCCTGGTCAAGCAAACAACGCTGAAGGTGCACCTTATTTAATTCCAAATGAGATTTTTGAGGACCTGGGAGATATTAACAGCTTGGTTGGATTGGATGATGGAAGCGGTTTTTCCTATGGCCAAAAAGATGAAAATACTATAAACGAAAAGCTATTTGCTGGCGACATCTCTTTGTTTTGCAACCCCCCTGATTTCTTTGAGTTGCTTGACCTAGAGGTGCCATTATCCTGGCAGACTAAACATGATGGCTGA
Protein sequence

>MS.gene013318.t1

MAETKLMIPGFRFHPTDVELVMYFLKRKILGRKFPFHVIAELDIYKYAPWDLPDKSLLKSGDLQWYFFTPVGKKYCTGGRMNRATEVGYWKTTGKDRSIEHKNQVVGMIRTLVFHTGKAPKGDRTDWVMHEYRLEDKDLADNGVPQNSYVICRVFQKEGPGPRNGAQYGKPFNEKDWDSEEEIDYVQAVPVAAVSAPALILPSSSHISEVNDMHPSASGCIGLTSLSCLSRLMPSGTTHPSALGNQADDDILSMLAIFDDENALAGNENNGSEKVDNPGQANNAEGAPYLIPNEIFEDLGDINSLVGLDDGSGFSYGQKDENTINEKLFAGDISLFCNPPDFFELLDLEVPLSWQTKHDG