Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013429.t1 | XP_013461513.1 | 96.2 | 312 | 11 | 1 | 1 | 312 | 1 | 311 | 1.10E-158 | 569.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013429.t1 | O22873 | 48.8 | 330 | 111 | 10 | 5 | 290 | 32 | 347 | 1.9e-58 | 227.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013429.t1 | A0A072V2G2 | 96.2 | 312 | 11 | 1 | 1 | 312 | 1 | 311 | 7.9e-159 | 569.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene013429.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013429.t1 | MTR_3g094020 | 98.397 | 312 | 4 | 1 | 1 | 312 | 1 | 311 | 0.0 | 629 |
| MS.gene013429.t1 | MTR_5g075390 | 52.366 | 317 | 131 | 8 | 7 | 312 | 51 | 358 | 4.53e-94 | 283 |
| MS.gene013429.t1 | MTR_3g467120 | 46.705 | 349 | 134 | 11 | 7 | 312 | 38 | 377 | 2.82e-87 | 266 |
| MS.gene013429.t1 | MTR_2g099050 | 43.056 | 288 | 89 | 10 | 7 | 231 | 72 | 347 | 1.15e-50 | 173 |
| MS.gene013429.t1 | MTR_6g034945 | 48.624 | 218 | 87 | 6 | 7 | 201 | 28 | 243 | 8.20e-48 | 162 |
| MS.gene013429.t1 | MTR_4g072090 | 69.492 | 118 | 36 | 0 | 90 | 207 | 341 | 458 | 2.21e-46 | 164 |
| MS.gene013429.t1 | MTR_4g072090 | 66.981 | 106 | 35 | 0 | 90 | 195 | 341 | 446 | 2.54e-38 | 141 |
| MS.gene013429.t1 | MTR_1g023690 | 51.923 | 156 | 73 | 1 | 92 | 247 | 370 | 523 | 1.55e-29 | 118 |
| MS.gene013429.t1 | MTR_2g090900 | 46.809 | 94 | 50 | 0 | 108 | 201 | 190 | 283 | 6.09e-18 | 83.2 |
| MS.gene013429.t1 | MTR_2g090900 | 46.809 | 94 | 50 | 0 | 108 | 201 | 190 | 283 | 1.09e-17 | 82.8 |
| MS.gene013429.t1 | MTR_4g079500 | 44.681 | 94 | 52 | 0 | 108 | 201 | 193 | 286 | 4.18e-17 | 80.9 |
| MS.gene013429.t1 | MTR_1g099030 | 31.053 | 190 | 119 | 2 | 24 | 213 | 51 | 228 | 5.59e-17 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013429.t1 | AT2G40620 | 51.057 | 331 | 98 | 11 | 5 | 288 | 32 | 345 | 8.79e-84 | 257 |
| MS.gene013429.t1 | AT1G06850 | 51.082 | 231 | 86 | 4 | 78 | 301 | 116 | 326 | 1.47e-68 | 217 |
| MS.gene013429.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.04e-53 | 180 |
| MS.gene013429.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene013429.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene013429.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene013429.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene013429.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene013429.t1 | AT2G31370 | 46.275 | 255 | 86 | 7 | 7 | 215 | 58 | 307 | 1.26e-53 | 180 |
| MS.gene013429.t1 | AT1G06070 | 45.200 | 250 | 94 | 6 | 7 | 217 | 73 | 318 | 1.24e-51 | 176 |
| MS.gene013429.t1 | AT4G38900 | 72.174 | 115 | 32 | 0 | 92 | 206 | 377 | 491 | 2.07e-46 | 164 |
| MS.gene013429.t1 | AT4G38900 | 72.174 | 115 | 32 | 0 | 92 | 206 | 377 | 491 | 2.07e-46 | 164 |
| MS.gene013429.t1 | AT1G43700 | 54.070 | 172 | 63 | 4 | 70 | 227 | 142 | 311 | 2.40e-46 | 160 |
| MS.gene013429.t1 | AT4G38900 | 68.595 | 121 | 32 | 1 | 92 | 206 | 377 | 497 | 5.84e-44 | 158 |
| MS.gene013429.t1 | AT2G21230 | 57.447 | 141 | 59 | 1 | 66 | 206 | 328 | 467 | 3.86e-41 | 150 |
| MS.gene013429.t1 | AT2G21230 | 57.447 | 141 | 59 | 1 | 66 | 206 | 328 | 467 | 3.86e-41 | 150 |
| MS.gene013429.t1 | AT2G21230 | 54.422 | 147 | 60 | 2 | 66 | 206 | 328 | 473 | 3.47e-38 | 142 |
| MS.gene013429.t1 | AT2G21230 | 55.645 | 124 | 54 | 1 | 66 | 189 | 328 | 450 | 5.83e-34 | 129 |
| MS.gene013429.t1 | AT1G06850 | 64.835 | 91 | 31 | 1 | 78 | 167 | 116 | 206 | 1.56e-31 | 118 |
| MS.gene013429.t1 | AT2G12900 | 41.667 | 96 | 56 | 0 | 109 | 204 | 116 | 211 | 4.24e-19 | 85.5 |
| MS.gene013429.t1 | AT3G58120 | 46.237 | 93 | 50 | 0 | 109 | 201 | 202 | 294 | 1.40e-18 | 85.1 |
| MS.gene013429.t1 | AT2G42380 | 41.026 | 117 | 62 | 1 | 108 | 217 | 185 | 301 | 1.82e-18 | 84.7 |
| MS.gene013429.t1 | AT2G12940 | 37.500 | 112 | 69 | 1 | 92 | 203 | 132 | 242 | 7.15e-17 | 79.7 |
| MS.gene013429.t1 | AT2G13150 | 40.594 | 101 | 59 | 1 | 101 | 201 | 142 | 241 | 7.22e-17 | 79.3 |
| MS.gene013429.t1 | AT2G42380 | 42.857 | 84 | 48 | 0 | 107 | 190 | 184 | 267 | 1.74e-14 | 72.8 |
| MS.gene013429.t1 | AT3G58120 | 43.750 | 80 | 45 | 0 | 109 | 188 | 202 | 281 | 1.10e-13 | 70.5 |
| MS.gene013429.t1 | AT2G21235 | 38.776 | 98 | 59 | 1 | 109 | 206 | 359 | 455 | 3.30e-13 | 70.5 |
| MS.gene013429.t1 | AT2G42380 | 37.607 | 117 | 55 | 2 | 108 | 217 | 185 | 290 | 3.54e-12 | 66.2 |
Find 97 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCTATCGGCCAATTTC+AGG | 0.184834 | 3.4:+85690985 | MS.gene013429:CDS |
| AACATGGTCCAAACGATCTT+AGG | 0.241223 | 3.4:+85690855 | MS.gene013429:CDS |
| TTTGATTTGATTCAGGATTC+TGG | 0.271099 | 3.4:+85688435 | MS.gene013429:intron |
| CAATGTCCAGCCCCTGAAAT+TGG | 0.281734 | 3.4:-85690997 | None:intergenic |
| CACAATTGAGCAAGTTTATC+AGG | 0.289271 | 3.4:-85688314 | None:intergenic |
| TTTCATTCCCTCTCATCTAA+TGG | 0.291764 | 3.4:+85690896 | MS.gene013429:CDS |
| GTTGCGGTGGTGGTGGATCT+TGG | 0.360501 | 3.4:-85688133 | None:intergenic |
| AGGGGCTGGACATTGGCAAC+AGG | 0.370603 | 3.4:+85691005 | MS.gene013429:CDS |
| TGCATGGCCCTAAGATCGTT+TGG | 0.389186 | 3.4:-85690863 | None:intergenic |
| CCATGCTGATACCTATGGTT+TGG | 0.391118 | 3.4:+85690781 | MS.gene013429:CDS |
| AAAGACCTCTTGGCGCGTTT+AGG | 0.396524 | 3.4:-85688347 | None:intergenic |
| GGTCGAAATCGTCGGGGATT+CGG | 0.403638 | 3.4:-85688067 | None:intergenic |
| GAGTTTGGATCCGGAATTAT+CGG | 0.405371 | 3.4:-85688189 | None:intergenic |
| TTTGCATCAAAAGGCGTTGT+TGG | 0.405645 | 3.4:-85691077 | None:intergenic |
| CGACGATTTCGACCTCGAAA+TGG | 0.407698 | 3.4:+85688076 | MS.gene013429:CDS |
| TACATCGATTCCGATAATTC+CGG | 0.408499 | 3.4:+85688179 | MS.gene013429:CDS |
| CATGCTGATACCTATGGTTT+GGG | 0.409516 | 3.4:+85690782 | MS.gene013429:CDS |
| TTAGTAAAATTTGCATCAAA+AGG | 0.417524 | 3.4:-85691086 | None:intergenic |
| AAACTGAGGCTGGTGGGGAC+TGG | 0.421487 | 3.4:-85690921 | None:intergenic |
| GATTCTATCGGCCAATTTCA+GGG | 0.428325 | 3.4:+85690986 | MS.gene013429:CDS |
| GTGGTGGTGGATCTTGGAAC+TGG | 0.429585 | 3.4:-85688127 | None:intergenic |
| ACCCACTTCATATGATTTGT+CGG | 0.433055 | 3.4:+85690949 | MS.gene013429:CDS |
| TATCGGCCAATTTCAGGGGC+TGG | 0.448809 | 3.4:+85690991 | MS.gene013429:CDS |
| GATAGGCTCAAGCTTGCTAC+TGG | 0.454169 | 3.4:+85690746 | MS.gene013429:CDS |
| ATTGAGATCGACGGTGGAAC+GGG | 0.455173 | 3.4:-85688031 | None:intergenic |
| CATTGAAGAACGAAGTTGAT+AGG | 0.457070 | 3.4:+85690729 | MS.gene013429:CDS |
| CAGCTTAGCTTGTTGCTCCA+TGG | 0.457331 | 3.4:-85689706 | None:intergenic |
| ATTTCGAGGTCGAAATCGTC+GGG | 0.457489 | 3.4:-85688074 | None:intergenic |
| TCTCATGTTCTGATGCCTGA+TGG | 0.464397 | 3.4:+85691031 | MS.gene013429:CDS |
| GGCGGTAGGAGAATTGAGTT+TGG | 0.473174 | 3.4:-85688204 | None:intergenic |
| CTGATAAACTTGCTCAATTG+TGG | 0.489201 | 3.4:+85688315 | MS.gene013429:CDS |
| CGTTTGGACCATGTTGTGGC+TGG | 0.489619 | 3.4:-85690847 | None:intergenic |
| ACAGAAACGGAGGGACCATC+AGG | 0.491647 | 3.4:-85691046 | None:intergenic |
| AGGAGAATTGAGTTTGGATC+CGG | 0.498325 | 3.4:-85688198 | None:intergenic |
| GGAATTGCTACGGCGGTGAC+CGG | 0.499947 | 3.4:-85688234 | None:intergenic |
| TCTTCTTCCTTGTTGTCTGA+AGG | 0.501718 | 3.4:+85688266 | MS.gene013429:CDS |
| CCAACCCATGCTGATACCTA+TGG | 0.503575 | 3.4:+85690776 | MS.gene013429:CDS |
| CAATTTCAGGGGCTGGACAT+TGG | 0.506474 | 3.4:+85690998 | MS.gene013429:CDS |
| AGATCAAACTGAGGCTGGTG+GGG | 0.510809 | 3.4:-85690926 | None:intergenic |
| GTTCCACCGTCGATCTCAAT+CGG | 0.512206 | 3.4:+85688034 | MS.gene013429:CDS |
| ATTATCGGAATCGATGTAAG+AGG | 0.514373 | 3.4:-85688174 | None:intergenic |
| ACATGGTCCAAACGATCTTA+GGG | 0.515048 | 3.4:+85690856 | MS.gene013429:CDS |
| TAGATCAAACTGAGGCTGGT+GGG | 0.518122 | 3.4:-85690927 | None:intergenic |
| TCGTCGTGTTGTTGCGGTGG+TGG | 0.518420 | 3.4:-85688143 | None:intergenic |
| TCGTGTTGTTGCGGTGGTGG+TGG | 0.524797 | 3.4:-85688140 | None:intergenic |
| TCTCCTACCGCCGCTAATGC+CGG | 0.526393 | 3.4:+85688215 | MS.gene013429:CDS |
| CATTTCGAGGTCGAAATCGT+CGG | 0.531230 | 3.4:-85688075 | None:intergenic |
| TGGGTAGATCAAACTGAGGC+TGG | 0.537417 | 3.4:-85690931 | None:intergenic |
| ACGGCGGTGACCGGCATTAG+CGG | 0.537421 | 3.4:-85688225 | None:intergenic |
| AAAATACCGAGTTGAAGCTT+CGG | 0.538764 | 3.4:+85689676 | MS.gene013429:CDS |
| GTTATGTGGTTGAGCTTGAA+AGG | 0.547036 | 3.4:+85688500 | MS.gene013429:CDS |
| CGGAGAAGCGTCGAAGTCGA+AGG | 0.552256 | 3.4:-85688102 | None:intergenic |
| ATGAAAATGTTGCATTTGCA+TGG | 0.556228 | 3.4:-85690879 | None:intergenic |
| TTCCGACAAATCATATGAAG+TGG | 0.557296 | 3.4:-85690951 | None:intergenic |
| GGGGCTGGACATTGGCAACA+GGG | 0.559117 | 3.4:+85691006 | MS.gene013429:CDS |
| CTGCGGCGAGGTCGAAAGAG+AGG | 0.561569 | 3.4:+85688470 | MS.gene013429:CDS |
| GATTGAGATCGACGGTGGAA+CGG | 0.569204 | 3.4:-85688032 | None:intergenic |
| CGGAATCGATGTAAGAGGAA+AGG | 0.570255 | 3.4:-85688169 | None:intergenic |
| AGGAGATCGTCGTGTTGTTG+CGG | 0.570948 | 3.4:-85688149 | None:intergenic |
| ATGTATCGGCGGAATTGCTA+CGG | 0.574251 | 3.4:-85688244 | None:intergenic |
| AGAGAGGAAAGCTTGTTATG+TGG | 0.577168 | 3.4:+85688486 | MS.gene013429:CDS |
| AGATCGTTTGGACCATGTTG+TGG | 0.578580 | 3.4:-85690851 | None:intergenic |
| GACTGGATCCATTAGATGAG+AGG | 0.584227 | 3.4:-85690904 | None:intergenic |
| AGTCGAAGGGATCCATTTCG+AGG | 0.586525 | 3.4:-85688088 | None:intergenic |
| TTGATGCATTCCCAAACCAT+AGG | 0.589815 | 3.4:-85690792 | None:intergenic |
| CAACAAGGAAGAAGATGTAT+CGG | 0.593104 | 3.4:-85688258 | None:intergenic |
| ACTGGATCCATTAGATGAGA+GGG | 0.595904 | 3.4:-85690903 | None:intergenic |
| GTAGATCAAACTGAGGCTGG+TGG | 0.597370 | 3.4:-85690928 | None:intergenic |
| ATTCTATCGGCCAATTTCAG+GGG | 0.601347 | 3.4:+85690987 | MS.gene013429:CDS |
| GAAGCTTCGGTTACAAACCA+TGG | 0.603767 | 3.4:+85689689 | MS.gene013429:CDS |
| TTCGATTCCTTCAGACAACA+AGG | 0.616363 | 3.4:-85688273 | None:intergenic |
| GGAGAAGCGTCGAAGTCGAA+GGG | 0.620947 | 3.4:-85688101 | None:intergenic |
| CAACAAGCTAAGCTGTGTGA+TGG | 0.622975 | 3.4:+85689714 | MS.gene013429:CDS |
| TTGTAACCGAAGCTTCAACT+CGG | 0.625038 | 3.4:-85689682 | None:intergenic |
| TCCGACAAATCATATGAAGT+GGG | 0.627186 | 3.4:-85690950 | None:intergenic |
| AGATCGTCGTGTTGTTGCGG+TGG | 0.629335 | 3.4:-85688146 | None:intergenic |
| CTTGGCGCGTTTAGGATCAA+CGG | 0.630373 | 3.4:-85688339 | None:intergenic |
| ATGTTGTGGCTGGTGCATGA+AGG | 0.637404 | 3.4:-85690837 | None:intergenic |
| TTCATGCACCAGCCACAACA+TGG | 0.640783 | 3.4:+85690839 | MS.gene013429:CDS |
| CCAAACCATAGGTATCAGCA+TGG | 0.641882 | 3.4:-85690781 | None:intergenic |
| GGTGGATCTTGGAACTGGAG+CGG | 0.658797 | 3.4:-85688122 | None:intergenic |
| CCATAGGTATCAGCATGGGT+TGG | 0.661247 | 3.4:-85690776 | None:intergenic |
| CAAACCATAGGTATCAGCAT+GGG | 0.662566 | 3.4:-85690780 | None:intergenic |
| TTGATCCTAAACGCGCCAAG+AGG | 0.666281 | 3.4:+85688342 | MS.gene013429:CDS |
| GCTCAAGCTTGCTACTGGAG+AGG | 0.667501 | 3.4:+85690751 | MS.gene013429:CDS |
| CGAATCGTCAATCTGCGGCG+AGG | 0.667585 | 3.4:+85688458 | MS.gene013429:CDS |
| CCTCCGATTGAGATCGACGG+TGG | 0.668695 | 3.4:-85688037 | None:intergenic |
| CAAGGAAGAAGATGTATCGG+CGG | 0.669677 | 3.4:-85688255 | None:intergenic |
| TGACCGGCATTAGCGGCGGT+AGG | 0.676875 | 3.4:-85688218 | None:intergenic |
| ATGTTGTCAAGTGATTCTAT+CGG | 0.677885 | 3.4:+85690974 | MS.gene013429:CDS |
| TATCGGCGGAATTGCTACGG+CGG | 0.692611 | 3.4:-85688241 | None:intergenic |
| CCACCGTCGATCTCAATCGG+AGG | 0.695045 | 3.4:+85688037 | MS.gene013429:CDS |
| GCGGTGACCGGCATTAGCGG+CGG | 0.701383 | 3.4:-85688222 | None:intergenic |
| GTACCTCCGATTGAGATCGA+CGG | 0.703198 | 3.4:-85688040 | None:intergenic |
| TTTCGAGGTCGAAATCGTCG+GGG | 0.718515 | 3.4:-85688073 | None:intergenic |
| TCTGGCGAATCGTCAATCTG+CGG | 0.734478 | 3.4:+85688453 | MS.gene013429:CDS |
| GAAGTGGGTAGATCAAACTG+AGG | 0.754115 | 3.4:-85690935 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTGAGCTAAATTAAT+AGG | - | chr3.4:85690444-85690463 | None:intergenic | 15.0% |
| !!! | GTTATTTTTTTTTTTCCATT+GGG | + | chr3.4:85689460-85689479 | MS.gene013429:intron | 15.0% |
| !!! | TAATATTTTTGATTCAACTT+AGG | - | chr3.4:85688603-85688622 | None:intergenic | 15.0% |
| !! | AAAAAAAATAACCAAAGGAT+AGG | - | chr3.4:85689452-85689471 | None:intergenic | 20.0% |
| !! | AAAAAAATAACCAAAGGATA+GGG | - | chr3.4:85689451-85689470 | None:intergenic | 20.0% |
| !! | AAACAAATGAAAGATATCTT+CGG | - | chr3.4:85689966-85689985 | None:intergenic | 20.0% |
| !! | ATAGACAAAACATTAATGTT+AGG | - | chr3.4:85690066-85690085 | None:intergenic | 20.0% |
| !! | ATATAAGGAATTTAACAAAC+TGG | - | chr3.4:85689567-85689586 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAAATAACCAA+AGG | - | chr3.4:85689457-85689476 | None:intergenic | 20.0% |
| !! | GTTGGAAATATATAGAAAAA+TGG | - | chr3.4:85689024-85689043 | None:intergenic | 20.0% |
| !! | TATAAGTTATCTTGTAGTAT+CGG | + | chr3.4:85690002-85690021 | MS.gene013429:intron | 20.0% |
| !! | TTCTATCAGTATAATATGAA+AGG | + | chr3.4:85689814-85689833 | MS.gene013429:intron | 20.0% |
| !!! | ACATGATTATATATTTGTTG+TGG | + | chr3.4:85688671-85688690 | MS.gene013429:intron | 20.0% |
| !!! | GGTTATTTTTTTTTTTCCAT+TGG | + | chr3.4:85689459-85689478 | MS.gene013429:intron | 20.0% |
| !!! | TAATTTTAGTCTCTTAAGTT+TGG | + | chr3.4:85689899-85689918 | MS.gene013429:intron | 20.0% |
| ! | AAAAAATTACATGTCATACG+AGG | - | chr3.4:85690227-85690246 | None:intergenic | 25.0% |
| ! | ACAAAACATTAATGTTAGGA+CGG | - | chr3.4:85690062-85690081 | None:intergenic | 25.0% |
| ! | AGTTCAATTAAAGGAAACAA+AGG | - | chr3.4:85689538-85689557 | None:intergenic | 25.0% |
| ! | ATTTATCACTACTTCAACTA+AGG | + | chr3.4:85690500-85690519 | MS.gene013429:intron | 25.0% |
| ! | GATATTCTAACAGAAACTAT+AGG | - | chr3.4:85689944-85689963 | None:intergenic | 25.0% |
| ! | TACAGCATTTATCCTTTAAA+TGG | - | chr3.4:85690157-85690176 | None:intergenic | 25.0% |
| ! | TAGCTTACATTCTTAGTAAT+TGG | + | chr3.4:85690302-85690321 | MS.gene013429:intron | 25.0% |
| ! | TCAGTGTTAAACTAAGTTAA+TGG | - | chr3.4:85689840-85689859 | None:intergenic | 25.0% |
| ! | TGTTAAATTCCTTATATCAG+TGG | + | chr3.4:85689570-85689589 | MS.gene013429:intron | 25.0% |
| ! | TTACATTCTTAGTAATTGGA+TGG | + | chr3.4:85690306-85690325 | MS.gene013429:intron | 25.0% |
| ! | TTGTTTCCTTTAATTGAACT+TGG | + | chr3.4:85689538-85689557 | MS.gene013429:intron | 25.0% |
| !! | TCATTGAATTGAAAAGTATG+AGG | - | chr3.4:85690036-85690055 | None:intergenic | 25.0% |
| !!! | AAAACAGAAACACTACTTTT+AGG | - | chr3.4:85690607-85690626 | None:intergenic | 25.0% |
| !!! | GTTGGTTTTATTAACAGAAA+CGG | - | chr3.4:85691062-85691081 | None:intergenic | 25.0% |
| !!! | TATATTTGTTGTGAAGCTTA+AGG | + | chr3.4:85688680-85688699 | MS.gene013429:intron | 25.0% |
| AAATTCCTTATATCAGTGGT+GGG | + | chr3.4:85689574-85689593 | MS.gene013429:intron | 30.0% | |
| AATAAAAAATCCCCCTCATT+TGG | + | chr3.4:85688821-85688840 | MS.gene013429:intron | 30.0% | |
| ATAAAAAATCCCCCTCATTT+GGG | + | chr3.4:85688822-85688841 | MS.gene013429:intron | 30.0% | |
| ATGAAAATGTTGCATTTGCA+TGG | - | chr3.4:85690882-85690901 | None:intergenic | 30.0% | |
| ATGTACAACGATTTGAAAAC+TGG | - | chr3.4:85690575-85690594 | None:intergenic | 30.0% | |
| ATGTTGTCAAGTGATTCTAT+CGG | + | chr3.4:85690974-85690993 | MS.gene013429:CDS | 30.0% | |
| CAATTACAAACTAAATGAGC+TGG | + | chr3.4:85690179-85690198 | MS.gene013429:intron | 30.0% | |
| CACTGAATTAATGTAAGCAT+CGG | + | chr3.4:85689854-85689873 | MS.gene013429:intron | 30.0% | |
| CAGCAAAACAAGAAAAAACA+AGG | - | chr3.4:85689776-85689795 | None:intergenic | 30.0% | |
| GAAGTAGTGATAAATGAACA+TGG | - | chr3.4:85690495-85690514 | None:intergenic | 30.0% | |
| GGCCTTCAAAAAAAAAAAGA+GGG | + | chr3.4:85689397-85689416 | MS.gene013429:intron | 30.0% | |
| TAAAGTGTAGCATATTTGCA+TGG | - | chr3.4:85689750-85689769 | None:intergenic | 30.0% | |
| TAAATTCCTTATATCAGTGG+TGG | + | chr3.4:85689573-85689592 | MS.gene013429:intron | 30.0% | |
| TATTAATATTTGAGCCTACG+TGG | + | chr3.4:85690087-85690106 | MS.gene013429:intron | 30.0% | |
| TGGAAACCAAGTTCAATTAA+AGG | - | chr3.4:85689547-85689566 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAAGACATT+GGG | + | chr3.4:85688764-85688783 | MS.gene013429:intron | 30.0% | |
| TTGGATGGTATATTAACACT+TGG | + | chr3.4:85690321-85690340 | MS.gene013429:intron | 30.0% | |
| ! | TGCTCAATTAAATCTTTTCC+AGG | + | chr3.4:85688561-85688580 | MS.gene013429:CDS | 30.0% |
| ! | TTCATTCATTTGGAAAGTGT+GGG | + | chr3.4:85690351-85690370 | MS.gene013429:intron | 30.0% |
| !! | CAGCTCATTTAGTTTGTAAT+TGG | - | chr3.4:85690181-85690200 | None:intergenic | 30.0% |
| !! | GTTTTATTAACAGAAACGGA+GGG | - | chr3.4:85691058-85691077 | None:intergenic | 30.0% |
| !! | TGGCAGTTCATTTTTCAAAA+TGG | + | chr3.4:85689507-85689526 | MS.gene013429:intron | 30.0% |
| !! | TTTGATTTGATTCAGGATTC+TGG | + | chr3.4:85688435-85688454 | MS.gene013429:intron | 30.0% |
| !!! | CTCCCTCTTTTTTTTTTTGA+AGG | - | chr3.4:85689402-85689421 | None:intergenic | 30.0% |
| !!! | CTTGTTTTTTCTTGTTTTGC+TGG | + | chr3.4:85689774-85689793 | MS.gene013429:intron | 30.0% |
| !!! | GAACTTGTTTTTATAGATCG+TGG | + | chr3.4:85688411-85688430 | MS.gene013429:intron | 30.0% |
| !!! | TTTTTTTTCCATTGGGCTAT+TGG | + | chr3.4:85689467-85689486 | MS.gene013429:intron | 30.0% |
| AAGAAATAGAAGACATTGGG+AGG | + | chr3.4:85688767-85688786 | MS.gene013429:intron | 35.0% | |
| ACTAGTCATTGAAGTAGTGA+AGG | - | chr3.4:85690552-85690571 | None:intergenic | 35.0% | |
| AGTCTCTTAAGTTTGGTAGA+TGG | + | chr3.4:85689906-85689925 | MS.gene013429:intron | 35.0% | |
| ATTAACTACACAGCCCATTT+AGG | - | chr3.4:85689093-85689112 | None:intergenic | 35.0% | |
| ATTATCGGAATCGATGTAAG+AGG | - | chr3.4:85688177-85688196 | None:intergenic | 35.0% | |
| CAACAAGGAAGAAGATGTAT+CGG | - | chr3.4:85688261-85688280 | None:intergenic | 35.0% | |
| CACAATTGAGCAAGTTTATC+AGG | - | chr3.4:85688317-85688336 | None:intergenic | 35.0% | |
| CGTATGAAGATTCTGTTCAA+GGG | + | chr3.4:85689321-85689340 | MS.gene013429:intron | 35.0% | |
| CTTCATTCATTTGGAAAGTG+TGG | + | chr3.4:85690350-85690369 | MS.gene013429:intron | 35.0% | |
| GAACTCAAAAATTGCATTGG+GGG | + | chr3.4:85688846-85688865 | MS.gene013429:intron | 35.0% | |
| GCATTAAAAGAAAGACCTCT+TGG | - | chr3.4:85688360-85688379 | None:intergenic | 35.0% | |
| GGAACTCAAAAATTGCATTG+GGG | + | chr3.4:85688845-85688864 | MS.gene013429:intron | 35.0% | |
| GGGAACTCAAAAATTGCATT+GGG | + | chr3.4:85688844-85688863 | MS.gene013429:intron | 35.0% | |
| GGGCCTTCAAAAAAAAAAAG+AGG | + | chr3.4:85689396-85689415 | MS.gene013429:intron | 35.0% | |
| GTCTCTTAAGTTTGGTAGAT+GGG | + | chr3.4:85689907-85689926 | MS.gene013429:intron | 35.0% | |
| GTGGAAGAAATAGAAGACAT+TGG | + | chr3.4:85688763-85688782 | MS.gene013429:intron | 35.0% | |
| TAAAAAATCCCCCTCATTTG+GGG | + | chr3.4:85688823-85688842 | MS.gene013429:intron | 35.0% | |
| TCCGACAAATCATATGAAGT+GGG | - | chr3.4:85690953-85690972 | None:intergenic | 35.0% | |
| TCGTATGAAGATTCTGTTCA+AGG | + | chr3.4:85689320-85689339 | MS.gene013429:intron | 35.0% | |
| TGACATGGTAGTCCATTTAA+AGG | + | chr3.4:85690142-85690161 | MS.gene013429:intron | 35.0% | |
| TGGTCTAGACTTCATTCATT+TGG | + | chr3.4:85690341-85690360 | MS.gene013429:intron | 35.0% | |
| TTAATAGGATGTCAACCGAA+AGG | - | chr3.4:85690429-85690448 | None:intergenic | 35.0% | |
| TTCCGACAAATCATATGAAG+TGG | - | chr3.4:85690954-85690973 | None:intergenic | 35.0% | |
| TTTCATTCCCTCTCATCTAA+TGG | + | chr3.4:85690896-85690915 | MS.gene013429:CDS | 35.0% | |
| ! | AAAATACCGAGTTGAAGCTT+CGG | + | chr3.4:85689676-85689695 | MS.gene013429:CDS | 35.0% |
| ! | ACCCACTTCATATGATTTGT+CGG | + | chr3.4:85690949-85690968 | MS.gene013429:CDS | 35.0% |
| ! | CATTGAAGAACGAAGTTGAT+AGG | + | chr3.4:85690729-85690748 | MS.gene013429:CDS | 35.0% |
| ! | CTGATAAACTTGCTCAATTG+TGG | + | chr3.4:85688315-85688334 | MS.gene013429:CDS | 35.0% |
| ! | TTTGTTGTGGCCATTAATGA+GGG | + | chr3.4:85689283-85689302 | MS.gene013429:intron | 35.0% |
| !! | ATTTGTTGTGGCCATTAATG+AGG | + | chr3.4:85689282-85689301 | MS.gene013429:intron | 35.0% |
| !! | TACATCGATTCCGATAATTC+CGG | + | chr3.4:85688179-85688198 | MS.gene013429:CDS | 35.0% |
| !! | TCGTGGATTTGATTTGATTC+AGG | + | chr3.4:85688428-85688447 | MS.gene013429:intron | 35.0% |
| !! | TGAAGCTTAAGGCTTTGTTT+GGG | + | chr3.4:85688691-85688710 | MS.gene013429:intron | 35.0% |
| !!! | CTTTTTCAGAGAGATACAAC+TGG | + | chr3.4:85689642-85689661 | MS.gene013429:intron | 35.0% |
| !!! | GGTTTTATTAACAGAAACGG+AGG | - | chr3.4:85691059-85691078 | None:intergenic | 35.0% |
| !!! | GGTTTTGATTCATGGTTCAT+TGG | - | chr3.4:85690531-85690550 | None:intergenic | 35.0% |
| !!! | GTAGTGAAGGTTTTGATTCA+TGG | - | chr3.4:85690539-85690558 | None:intergenic | 35.0% |
| AAAAAATCCCCCTCATTTGG+GGG | + | chr3.4:85688824-85688843 | MS.gene013429:intron | 40.0% | |
| AAAGCAAACCAATAGCCCAA+TGG | - | chr3.4:85689478-85689497 | None:intergenic | 40.0% | |
| AAAGGATAGGGTAACTGTTC+TGG | - | chr3.4:85689439-85689458 | None:intergenic | 40.0% | |
| AACATGGTCCAAACGATCTT+AGG | + | chr3.4:85690855-85690874 | MS.gene013429:CDS | 40.0% | |
| AAGTTAGGGAGAGAGCAATA+AGG | + | chr3.4:85689219-85689238 | MS.gene013429:intron | 40.0% | |
| ACATGGTCCAAACGATCTTA+GGG | + | chr3.4:85690856-85690875 | MS.gene013429:CDS | 40.0% | |
| ACTCCCAAACAAAGCCTAAA+TGG | + | chr3.4:85689076-85689095 | MS.gene013429:intron | 40.0% | |
| ACTGGATCCATTAGATGAGA+GGG | - | chr3.4:85690906-85690925 | None:intergenic | 40.0% | |
| AGAACAGTTACCCTATCCTT+TGG | + | chr3.4:85689438-85689457 | MS.gene013429:intron | 40.0% | |
| AGGAGAATTGAGTTTGGATC+CGG | - | chr3.4:85688201-85688220 | None:intergenic | 40.0% | |
| AGTGATAAATCCGATCAGAG+AGG | + | chr3.4:85689126-85689145 | MS.gene013429:intron | 40.0% | |
| AGTTAGGGAGAGAGCAATAA+GGG | + | chr3.4:85689220-85689239 | MS.gene013429:intron | 40.0% | |
| ATAAATCCGATCAGAGAGGT+AGG | + | chr3.4:85689130-85689149 | MS.gene013429:intron | 40.0% | |
| ATTCTATCGGCCAATTTCAG+GGG | + | chr3.4:85690987-85691006 | MS.gene013429:CDS | 40.0% | |
| CAAACCATAGGTATCAGCAT+GGG | - | chr3.4:85690783-85690802 | None:intergenic | 40.0% | |
| CATGCTGATACCTATGGTTT+GGG | + | chr3.4:85690782-85690801 | MS.gene013429:CDS | 40.0% | |
| CTACAGTGATTGAAGCCTTT+CGG | + | chr3.4:85690411-85690430 | MS.gene013429:intron | 40.0% | |
| CTCCCAAACAAAGCCTAAAT+GGG | + | chr3.4:85689077-85689096 | MS.gene013429:intron | 40.0% | |
| GAGTTTGGATCCGGAATTAT+CGG | - | chr3.4:85688192-85688211 | None:intergenic | 40.0% | |
| GATTCTATCGGCCAATTTCA+GGG | + | chr3.4:85690986-85691005 | MS.gene013429:CDS | 40.0% | |
| GGCAATGATGAGTAATAACC+TGG | - | chr3.4:85688582-85688601 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAATTGCAT+TGG | + | chr3.4:85688843-85688862 | MS.gene013429:intron | 40.0% | |
| GTTATGTGGTTGAGCTTGAA+AGG | + | chr3.4:85688500-85688519 | MS.gene013429:CDS | 40.0% | |
| TCAAAAATTGCATTGGGGGA+GGG | + | chr3.4:85688850-85688869 | MS.gene013429:intron | 40.0% | |
| TCACAAACCATAATCCACGT+AGG | - | chr3.4:85690104-85690123 | None:intergenic | 40.0% | |
| TGATTCTATCGGCCAATTTC+AGG | + | chr3.4:85690985-85691004 | MS.gene013429:CDS | 40.0% | |
| TTCGATTCCTTCAGACAACA+AGG | - | chr3.4:85688276-85688295 | None:intergenic | 40.0% | |
| TTGATGCATTCCCAAACCAT+AGG | - | chr3.4:85690795-85690814 | None:intergenic | 40.0% | |
| TTGTAACCGAAGCTTCAACT+CGG | - | chr3.4:85689685-85689704 | None:intergenic | 40.0% | |
| TTTCAACCTACCTCTCTGAT+CGG | - | chr3.4:85689139-85689158 | None:intergenic | 40.0% | |
| ! | ATAGGGTAACTGTTCTGGAT+TGG | - | chr3.4:85689434-85689453 | None:intergenic | 40.0% |
| ! | ATCAGAGAGGTAGGTTGAAA+TGG | + | chr3.4:85689139-85689158 | MS.gene013429:intron | 40.0% |
| ! | ATTTGAGCCTACGTGGATTA+TGG | + | chr3.4:85690094-85690113 | MS.gene013429:intron | 40.0% |
| ! | TCTTCTTCCTTGTTGTCTGA+AGG | + | chr3.4:85688266-85688285 | MS.gene013429:CDS | 40.0% |
| !! | AGAGAGGAAAGCTTGTTATG+TGG | + | chr3.4:85688486-85688505 | MS.gene013429:CDS | 40.0% |
| !! | AGCCCATTTAGGCTTTGTTT+GGG | - | chr3.4:85689082-85689101 | None:intergenic | 40.0% |
| !! | GTGAAGCTTAAGGCTTTGTT+TGG | + | chr3.4:85688690-85688709 | MS.gene013429:intron | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | + | chr3.4:85688698-85688717 | MS.gene013429:intron | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr3.4:85689075-85689094 | None:intergenic | 40.0% |
| !!! | GAGGGTTTTGGAAAAAAGGA+AGG | + | chr3.4:85688735-85688754 | MS.gene013429:intron | 40.0% |
| !!! | TGGTTTGCTTTTCACTCTTG+TGG | + | chr3.4:85689487-85689506 | MS.gene013429:intron | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | - | chr3.4:85688836-85688855 | None:intergenic | 40.0% |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | - | chr3.4:85688837-85688856 | None:intergenic | 40.0% |
| AACGTCCCAACCCTCATTAA+TGG | - | chr3.4:85689296-85689315 | None:intergenic | 45.0% | |
| ACCATATTCACAGGTGGAGT+GGG | + | chr3.4:85689376-85689395 | MS.gene013429:intron | 45.0% | |
| AGATCGTTTGGACCATGTTG+TGG | - | chr3.4:85690854-85690873 | None:intergenic | 45.0% | |
| AGCACTCTGACGCTTAAGTT+AGG | + | chr3.4:85689204-85689223 | MS.gene013429:intron | 45.0% | |
| ATAGAAGACATTGGGAGGAG+AGG | + | chr3.4:85688772-85688791 | MS.gene013429:intron | 45.0% | |
| ATTTCGAGGTCGAAATCGTC+GGG | - | chr3.4:85688077-85688096 | None:intergenic | 45.0% | |
| CAAAAATTGCATTGGGGGAG+GGG | + | chr3.4:85688851-85688870 | MS.gene013429:intron | 45.0% | |
| CAACAAGCTAAGCTGTGTGA+TGG | + | chr3.4:85689714-85689733 | MS.gene013429:CDS | 45.0% | |
| CAAGGAAGAAGATGTATCGG+CGG | - | chr3.4:85688258-85688277 | None:intergenic | 45.0% | |
| CATTTCGAGGTCGAAATCGT+CGG | - | chr3.4:85688078-85688097 | None:intergenic | 45.0% | |
| CCAAACCATAGGTATCAGCA+TGG | - | chr3.4:85690784-85690803 | None:intergenic | 45.0% | |
| CCATGCTGATACCTATGGTT+TGG | + | chr3.4:85690781-85690800 | MS.gene013429:CDS | 45.0% | |
| CGGAATCGATGTAAGAGGAA+AGG | - | chr3.4:85688172-85688191 | None:intergenic | 45.0% | |
| CGTCTGTAGCGATGACATTA+GGG | + | chr3.4:85689169-85689188 | MS.gene013429:intron | 45.0% | |
| CTCAAAAATTGCATTGGGGG+AGG | + | chr3.4:85688849-85688868 | MS.gene013429:intron | 45.0% | |
| GAAAGCCCACCACTGATATA+AGG | - | chr3.4:85689582-85689601 | None:intergenic | 45.0% | |
| GAAGCTTCGGTTACAAACCA+TGG | + | chr3.4:85689689-85689708 | MS.gene013429:CDS | 45.0% | |
| GAAGTGGGTAGATCAAACTG+AGG | - | chr3.4:85690938-85690957 | None:intergenic | 45.0% | |
| GACTGGATCCATTAGATGAG+AGG | - | chr3.4:85690907-85690926 | None:intergenic | 45.0% | |
| GCACTCTGACGCTTAAGTTA+GGG | + | chr3.4:85689205-85689224 | MS.gene013429:intron | 45.0% | |
| GGAAAAAAGGAAGGAGCAAG+TGG | + | chr3.4:85688744-85688763 | MS.gene013429:intron | 45.0% | |
| GTCAACTGTCTCAGATGACA+TGG | + | chr3.4:85690127-85690146 | MS.gene013429:intron | 45.0% | |
| GTCTGTAGCGATGACATTAG+GGG | + | chr3.4:85689170-85689189 | MS.gene013429:intron | 45.0% | |
| GTTCAAGGGAATCTGTGTGT+GGG | + | chr3.4:85689335-85689354 | MS.gene013429:intron | 45.0% | |
| TAATGAGGGTTGGGACGTTA+TGG | + | chr3.4:85689297-85689316 | MS.gene013429:intron | 45.0% | |
| TAGAAGACATTGGGAGGAGA+GGG | + | chr3.4:85688773-85688792 | MS.gene013429:intron | 45.0% | |
| TAGATCAAACTGAGGCTGGT+GGG | - | chr3.4:85690930-85690949 | None:intergenic | 45.0% | |
| TCTCATGTTCTGATGCCTGA+TGG | + | chr3.4:85691031-85691050 | MS.gene013429:CDS | 45.0% | |
| TGTGGCCATTAATGAGGGTT+GGG | + | chr3.4:85689288-85689307 | MS.gene013429:intron | 45.0% | |
| TGTTCAAGGGAATCTGTGTG+TGG | + | chr3.4:85689334-85689353 | MS.gene013429:intron | 45.0% | |
| TTGGACTCCACCATATTCAC+AGG | + | chr3.4:85689367-85689386 | MS.gene013429:intron | 45.0% | |
| TTGTGGCCATTAATGAGGGT+TGG | + | chr3.4:85689287-85689306 | MS.gene013429:intron | 45.0% | |
| ! | ATGTATCGGCGGAATTGCTA+CGG | - | chr3.4:85688247-85688266 | None:intergenic | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr3.4:85688703-85688722 | MS.gene013429:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr3.4:85688722-85688703 | None:intergenic | 45.0% |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | - | chr3.4:85688835-85688854 | None:intergenic | 45.0% |
| ! | TTTGGAAAGTGTGGGTGACT+TGG | + | chr3.4:85690359-85690378 | MS.gene013429:intron | 45.0% |
| !! | CAGCCCATTTAGGCTTTGTT+TGG | - | chr3.4:85689083-85689102 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr3.4:85688702-85688721 | MS.gene013429:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr3.4:85688721-85688702 | None:intergenic | 45.0% |
| !!! | AGGGGAGGGTTTTGGAAAAA+AGG | + | chr3.4:85688731-85688750 | MS.gene013429:intron | 45.0% |
| !!! | ATAATTATTATTTTTAAAAC+TGG | - | chr3.4:85690683-85690702 | None:intergenic | 5.0% |
| AAAGACCTCTTGGCGCGTTT+AGG | - | chr3.4:85688350-85688369 | None:intergenic | 50.0% | |
| AGATCAAACTGAGGCTGGTG+GGG | - | chr3.4:85690929-85690948 | None:intergenic | 50.0% | |
| AGTCGAAGGGATCCATTTCG+AGG | - | chr3.4:85688091-85688110 | None:intergenic | 50.0% | |
| ATGTTGTGGCTGGTGCATGA+AGG | - | chr3.4:85690840-85690859 | None:intergenic | 50.0% | |
| ATTGAGATCGACGGTGGAAC+GGG | - | chr3.4:85688034-85688053 | None:intergenic | 50.0% | |
| CAATGTCCAGCCCCTGAAAT+TGG | - | chr3.4:85691000-85691019 | None:intergenic | 50.0% | |
| CAATTTCAGGGGCTGGACAT+TGG | + | chr3.4:85690998-85691017 | MS.gene013429:CDS | 50.0% | |
| CACCATATTCACAGGTGGAG+TGG | + | chr3.4:85689375-85689394 | MS.gene013429:intron | 50.0% | |
| CACTCCACCTGTGAATATGG+TGG | - | chr3.4:85689377-85689396 | None:intergenic | 50.0% | |
| CCAACCCATGCTGATACCTA+TGG | + | chr3.4:85690776-85690795 | MS.gene013429:CDS | 50.0% | |
| CCATAGGTATCAGCATGGGT+TGG | - | chr3.4:85690779-85690798 | None:intergenic | 50.0% | |
| CGACGATTTCGACCTCGAAA+TGG | + | chr3.4:85688076-85688095 | MS.gene013429:CDS | 50.0% | |
| GACTCCACCATATTCACAGG+TGG | + | chr3.4:85689370-85689389 | MS.gene013429:intron | 50.0% | |
| GATTGAGATCGACGGTGGAA+CGG | - | chr3.4:85688035-85688054 | None:intergenic | 50.0% | |
| GCGTCTGTAGCGATGACATT+AGG | + | chr3.4:85689168-85689187 | MS.gene013429:intron | 50.0% | |
| GGCGGTAGGAGAATTGAGTT+TGG | - | chr3.4:85688207-85688226 | None:intergenic | 50.0% | |
| GTACCTCCGATTGAGATCGA+CGG | - | chr3.4:85688043-85688062 | None:intergenic | 50.0% | |
| GTAGATCAAACTGAGGCTGG+TGG | - | chr3.4:85690931-85690950 | None:intergenic | 50.0% | |
| GTTCCACCGTCGATCTCAAT+CGG | + | chr3.4:85688034-85688053 | MS.gene013429:CDS | 50.0% | |
| TCTGGCGAATCGTCAATCTG+CGG | + | chr3.4:85688453-85688472 | MS.gene013429:CDS | 50.0% | |
| TGCAACGACTTGAGCTGACA+TGG | - | chr3.4:85690259-85690278 | None:intergenic | 50.0% | |
| TGCATGGCCCTAAGATCGTT+TGG | - | chr3.4:85690866-85690885 | None:intergenic | 50.0% | |
| TGGGTAGATCAAACTGAGGC+TGG | - | chr3.4:85690934-85690953 | None:intergenic | 50.0% | |
| TGTAGCGATGACATTAGGGG+TGG | + | chr3.4:85689173-85689192 | MS.gene013429:intron | 50.0% | |
| TGTGTGTGGGAACGTCGAAT+TGG | + | chr3.4:85689348-85689367 | MS.gene013429:intron | 50.0% | |
| TTCATGCACCAGCCACAACA+TGG | + | chr3.4:85690839-85690858 | MS.gene013429:CDS | 50.0% | |
| TTGAGTTCCCCCAAATGAGG+GGG | - | chr3.4:85688834-85688853 | None:intergenic | 50.0% | |
| TTGATCCTAAACGCGCCAAG+AGG | + | chr3.4:85688342-85688361 | MS.gene013429:CDS | 50.0% | |
| TTTCGAGGTCGAAATCGTCG+GGG | - | chr3.4:85688076-85688095 | None:intergenic | 50.0% | |
| TTTGGGAGTTTGGAGGGGAA+GGG | - | chr3.4:85689065-85689084 | None:intergenic | 50.0% | |
| ! | AGGAGATCGTCGTGTTGTTG+CGG | - | chr3.4:85688152-85688171 | None:intergenic | 50.0% |
| ! | CTTGGCGCGTTTAGGATCAA+CGG | - | chr3.4:85688342-85688361 | None:intergenic | 50.0% |
| !! | CAGCTTAGCTTGTTGCTCCA+TGG | - | chr3.4:85689709-85689728 | None:intergenic | 50.0% |
| !! | GATAGGCTCAAGCTTGCTAC+TGG | + | chr3.4:85690746-85690765 | MS.gene013429:CDS | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr3.4:85688701-85688720 | MS.gene013429:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr3.4:85688720-85688701 | None:intergenic | 50.0% |
| ACAGAAACGGAGGGACCATC+AGG | - | chr3.4:85691049-85691068 | None:intergenic | 55.0% | |
| ATTGCATTGGGGGAGGGGTT+TGG | + | chr3.4:85688856-85688875 | MS.gene013429:intron | 55.0% | |
| CGACTTGAGCTGACATGGCA+TGG | - | chr3.4:85690254-85690273 | None:intergenic | 55.0% | |
| CGTTTGGACCATGTTGTGGC+TGG | - | chr3.4:85690850-85690869 | None:intergenic | 55.0% | |
| GCCCACTCCACCTGTGAATA+TGG | - | chr3.4:85689380-85689399 | None:intergenic | 55.0% | |
| GGTCGAAATCGTCGGGGATT+CGG | - | chr3.4:85688070-85688089 | None:intergenic | 55.0% | |
| GGTGGATCTTGGAACTGGAG+CGG | - | chr3.4:85688125-85688144 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | - | chr3.4:85688726-85688707 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | + | chr3.4:85688707-85688726 | MS.gene013429:intron | 55.0% | |
| TATCGGCCAATTTCAGGGGC+TGG | + | chr3.4:85690991-85691010 | MS.gene013429:CDS | 55.0% | |
| TATCGGCGGAATTGCTACGG+CGG | - | chr3.4:85688244-85688263 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr3.4:85688706-85688725 | MS.gene013429:intron | 55.0% | |
| TTGCATTGGGGGAGGGGTTT+GGG | + | chr3.4:85688857-85688876 | MS.gene013429:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | + | chr3.4:85688708-85688727 | MS.gene013429:intron | 55.0% | |
| ! | AGATCGTCGTGTTGTTGCGG+TGG | - | chr3.4:85688149-85688168 | None:intergenic | 55.0% |
| !! | GCTCAAGCTTGCTACTGGAG+AGG | + | chr3.4:85690751-85690770 | MS.gene013429:CDS | 55.0% |
| !! | GGAGAAGCGTCGAAGTCGAA+GGG | - | chr3.4:85688104-85688123 | None:intergenic | 55.0% |
| !! | GTGGTGGTGGATCTTGGAAC+TGG | - | chr3.4:85688130-85688149 | None:intergenic | 55.0% |
| AAACTGAGGCTGGTGGGGAC+TGG | - | chr3.4:85690924-85690943 | None:intergenic | 60.0% | |
| AGGGGCTGGACATTGGCAAC+AGG | + | chr3.4:85691005-85691024 | MS.gene013429:CDS | 60.0% | |
| AGGGGTTTGGGGGGTTATGG+AGG | + | chr3.4:85688869-85688888 | MS.gene013429:intron | 60.0% | |
| CCACCGTCGATCTCAATCGG+AGG | + | chr3.4:85688037-85688056 | MS.gene013429:CDS | 60.0% | |
| CCTCCGATTGAGATCGACGG+TGG | - | chr3.4:85688040-85688059 | None:intergenic | 60.0% | |
| CGAATCGTCAATCTGCGGCG+AGG | + | chr3.4:85688458-85688477 | MS.gene013429:CDS | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr3.4:85689060-85689079 | None:intergenic | 60.0% | |
| GGAATTGCTACGGCGGTGAC+CGG | - | chr3.4:85688237-85688256 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAAGGGA+GGG | - | chr3.4:85689061-85689080 | None:intergenic | 60.0% | |
| GGGGCTGGACATTGGCAACA+GGG | + | chr3.4:85691006-85691025 | MS.gene013429:CDS | 60.0% | |
| GGGGTTTGGGGGGTTATGGA+GGG | + | chr3.4:85688870-85688889 | MS.gene013429:intron | 60.0% | |
| TCTCCTACCGCCGCTAATGC+CGG | + | chr3.4:85688215-85688234 | MS.gene013429:CDS | 60.0% | |
| TGCATTGGGGGAGGGGTTTG+GGG | + | chr3.4:85688858-85688877 | MS.gene013429:intron | 60.0% | |
| ! | TCGTCGTGTTGTTGCGGTGG+TGG | - | chr3.4:85688146-85688165 | None:intergenic | 60.0% |
| ! | TCGTGTTGTTGCGGTGGTGG+TGG | - | chr3.4:85688143-85688162 | None:intergenic | 60.0% |
| !! | CGGAGAAGCGTCGAAGTCGA+AGG | - | chr3.4:85688105-85688124 | None:intergenic | 60.0% |
| !! | GTTGCGGTGGTGGTGGATCT+TGG | - | chr3.4:85688136-85688155 | None:intergenic | 60.0% |
| ACGGCGGTGACCGGCATTAG+CGG | - | chr3.4:85688228-85688247 | None:intergenic | 65.0% | |
| CATTGGGGGAGGGGTTTGGG+GGG | + | chr3.4:85688860-85688879 | MS.gene013429:intron | 65.0% | |
| CTGCGGCGAGGTCGAAAGAG+AGG | + | chr3.4:85688470-85688489 | MS.gene013429:CDS | 65.0% | |
| GAAGGGAGGGGAGGGCTTTG+GGG | - | chr3.4:85689048-85689067 | None:intergenic | 65.0% | |
| GAGTTTGGAGGGGAGGGGAG+GGG | + | chr3.4:85688713-85688732 | MS.gene013429:intron | 65.0% | |
| GCATTGGGGGAGGGGTTTGG+GGG | + | chr3.4:85688859-85688878 | MS.gene013429:intron | 65.0% | |
| GGAAGGGAGGGGAGGGCTTT+GGG | - | chr3.4:85689049-85689068 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | + | chr3.4:85688712-85688731 | MS.gene013429:intron | 65.0% | |
| GGGAGGGGTTTGGGGGGTTA+TGG | + | chr3.4:85688866-85688885 | MS.gene013429:intron | 65.0% | |
| GGGAGTTTGGAGGGGAAGGG+AGG | - | chr3.4:85689062-85689081 | None:intergenic | 65.0% | |
| TGACCGGCATTAGCGGCGGT+AGG | - | chr3.4:85688221-85688240 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+GGG | - | chr3.4:85689056-85689075 | None:intergenic | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | - | chr3.4:85689057-85689076 | None:intergenic | 65.0% | |
| ! | AAGGGAGGGGAGGGCTTTGG+GGG | - | chr3.4:85689047-85689066 | None:intergenic | 65.0% |
| GCGGTGACCGGCATTAGCGG+CGG | - | chr3.4:85688225-85688244 | None:intergenic | 70.0% | |
| GGGAAGGGAGGGGAGGGCTT+TGG | - | chr3.4:85689050-85689069 | None:intergenic | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | + | chr3.4:85688711-85688730 | MS.gene013429:intron | 70.0% | |
| TTGGAGGGGAGGGGAGGGGA+GGG | + | chr3.4:85688717-85688736 | MS.gene013429:intron | 70.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | + | chr3.4:85688716-85688735 | MS.gene013429:intron | 70.0% | |
| ! | GGGAGGGGAGGGGAGGGTTT+TGG | + | chr3.4:85688723-85688742 | MS.gene013429:intron | 70.0% |
| !! | AGGGAGGGGAGGGCTTTGGG+GGG | - | chr3.4:85689046-85689065 | None:intergenic | 70.0% |
| !! | AGGGGAGGGCTTTGGGGGGT+TGG | - | chr3.4:85689042-85689061 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 85688020 | 85691093 | 85688020 | ID=MS.gene013429 |
| chr3.4 | mRNA | 85688020 | 85691093 | 85688020 | ID=MS.gene013429.t1;Parent=MS.gene013429 |
| chr3.4 | exon | 85688020 | 85688363 | 85688020 | ID=MS.gene013429.t1.exon1;Parent=MS.gene013429.t1 |
| chr3.4 | CDS | 85688020 | 85688363 | 85688020 | ID=cds.MS.gene013429.t1;Parent=MS.gene013429.t1 |
| chr3.4 | exon | 85688450 | 85688582 | 85688450 | ID=MS.gene013429.t1.exon2;Parent=MS.gene013429.t1 |
| chr3.4 | CDS | 85688450 | 85688582 | 85688450 | ID=cds.MS.gene013429.t1;Parent=MS.gene013429.t1 |
| chr3.4 | exon | 85689651 | 85689735 | 85689651 | ID=MS.gene013429.t1.exon3;Parent=MS.gene013429.t1 |
| chr3.4 | CDS | 85689651 | 85689735 | 85689651 | ID=cds.MS.gene013429.t1;Parent=MS.gene013429.t1 |
| chr3.4 | exon | 85690717 | 85691093 | 85690717 | ID=MS.gene013429.t1.exon4;Parent=MS.gene013429.t1 |
| chr3.4 | CDS | 85690717 | 85691093 | 85690717 | ID=cds.MS.gene013429.t1;Parent=MS.gene013429.t1 |
| Gene Sequence |
| Protein sequence |
