Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01344.t1 | XP_024632048.1 | 95.8 | 770 | 19 | 1 | 1 | 770 | 144 | 900 | 0.00E+00 | 1334.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01344.t1 | Q0D5G4 | 51.2 | 658 | 254 | 14 | 87 | 703 | 320 | 951 | 5.0e-153 | 543.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01344.t1 | G7ILC5 | 95.6 | 770 | 18 | 2 | 1 | 770 | 135 | 888 | 0.0e+00 | 1325.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene01344.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01344.t1 | MTR_2g011940 | 95.714 | 770 | 17 | 2 | 1 | 770 | 135 | 888 | 0.0 | 1503 |
| MS.gene01344.t1 | MTR_2g011940 | 96.988 | 498 | 12 | 1 | 1 | 498 | 144 | 638 | 0.0 | 1001 |
| MS.gene01344.t1 | MTR_2g011940 | 95.276 | 508 | 21 | 1 | 1 | 508 | 144 | 648 | 0.0 | 1000 |
| MS.gene01344.t1 | MTR_4g028130 | 52.837 | 564 | 220 | 11 | 168 | 716 | 270 | 802 | 0.0 | 555 |
| MS.gene01344.t1 | MTR_4g028130 | 50.333 | 600 | 216 | 14 | 168 | 716 | 270 | 838 | 0.0 | 542 |
| MS.gene01344.t1 | MTR_3g467380 | 45.156 | 640 | 274 | 13 | 94 | 690 | 223 | 828 | 1.44e-162 | 494 |
| MS.gene01344.t1 | MTR_4g028130 | 56.131 | 367 | 124 | 4 | 168 | 497 | 270 | 636 | 2.40e-130 | 402 |
| MS.gene01344.t1 | MTR_5g075410 | 46.801 | 297 | 118 | 4 | 174 | 431 | 283 | 578 | 2.55e-77 | 265 |
| MS.gene01344.t1 | MTR_5g075410 | 41.040 | 173 | 82 | 5 | 522 | 690 | 618 | 774 | 5.50e-25 | 111 |
| MS.gene01344.t1 | MTR_7g073240 | 44.481 | 308 | 130 | 6 | 180 | 484 | 89 | 358 | 4.49e-76 | 250 |
| MS.gene01344.t1 | MTR_7g083700 | 39.394 | 132 | 71 | 3 | 212 | 339 | 126 | 252 | 1.52e-19 | 90.9 |
| MS.gene01344.t1 | MTR_7g059330 | 38.235 | 102 | 61 | 2 | 212 | 311 | 623 | 724 | 2.46e-15 | 80.9 |
| MS.gene01344.t1 | MTR_1g058350 | 35.484 | 124 | 72 | 4 | 195 | 312 | 58 | 179 | 2.43e-14 | 75.5 |
| MS.gene01344.t1 | MTR_7g117455 | 38.679 | 106 | 57 | 4 | 212 | 311 | 117 | 220 | 1.75e-13 | 73.9 |
| MS.gene01344.t1 | MTR_7g105370 | 41.000 | 100 | 52 | 5 | 217 | 312 | 65 | 161 | 6.43e-13 | 70.9 |
| MS.gene01344.t1 | MTR_1g093600 | 33.813 | 139 | 72 | 5 | 212 | 332 | 191 | 327 | 3.58e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01344.t1 | AT4G32010 | 52.314 | 497 | 215 | 8 | 168 | 656 | 237 | 719 | 2.82e-158 | 479 |
| MS.gene01344.t1 | AT4G32010 | 51.896 | 501 | 215 | 9 | 168 | 656 | 237 | 723 | 4.44e-156 | 473 |
| MS.gene01344.t1 | AT2G30470 | 45.993 | 574 | 266 | 9 | 111 | 657 | 182 | 738 | 1.54e-145 | 446 |
| MS.gene01344.t1 | AT4G21550 | 40.404 | 396 | 190 | 10 | 43 | 429 | 168 | 526 | 2.32e-73 | 249 |
| MS.gene01344.t1 | AT4G21550 | 40.476 | 420 | 200 | 11 | 43 | 453 | 168 | 546 | 5.66e-70 | 244 |
| MS.gene01344.t1 | AT4G21550 | 44.720 | 161 | 60 | 4 | 537 | 697 | 531 | 662 | 9.67e-22 | 101 |
| MS.gene01344.t1 | AT4G21550 | 39.791 | 382 | 184 | 10 | 43 | 415 | 168 | 512 | 1.67e-67 | 233 |
| MS.gene01344.t1 | AT3G26790 | 41.346 | 104 | 60 | 1 | 212 | 314 | 91 | 194 | 2.05e-19 | 90.5 |
| MS.gene01344.t1 | AT3G24650 | 35.172 | 145 | 76 | 4 | 175 | 311 | 538 | 672 | 2.95e-16 | 83.6 |
| MS.gene01344.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 212 | 312 | 37 | 142 | 4.45e-15 | 74.3 |
| MS.gene01344.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 212 | 312 | 37 | 142 | 4.45e-15 | 74.3 |
| MS.gene01344.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 212 | 312 | 37 | 142 | 4.71e-15 | 76.3 |
| MS.gene01344.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 212 | 312 | 37 | 142 | 5.15e-15 | 75.9 |
| MS.gene01344.t1 | AT5G06250 | 37.391 | 115 | 56 | 4 | 212 | 312 | 45 | 157 | 5.32e-15 | 76.6 |
| MS.gene01344.t1 | AT5G06250 | 37.391 | 115 | 56 | 4 | 212 | 312 | 45 | 157 | 5.43e-15 | 76.3 |
| MS.gene01344.t1 | AT5G06250 | 37.391 | 115 | 56 | 4 | 212 | 312 | 45 | 157 | 6.06e-15 | 76.6 |
| MS.gene01344.t1 | AT5G06250 | 37.391 | 115 | 56 | 4 | 212 | 312 | 45 | 157 | 7.07e-15 | 76.3 |
| MS.gene01344.t1 | AT5G06250 | 37.391 | 115 | 56 | 4 | 212 | 312 | 45 | 157 | 8.34e-15 | 75.9 |
| MS.gene01344.t1 | AT1G28300 | 39.000 | 100 | 59 | 2 | 198 | 296 | 157 | 255 | 5.03e-14 | 75.1 |
| MS.gene01344.t1 | AT3G11580 | 36.207 | 116 | 57 | 4 | 212 | 312 | 28 | 141 | 1.00e-13 | 72.8 |
| MS.gene01344.t1 | AT4G01500 | 40.449 | 89 | 50 | 2 | 212 | 299 | 35 | 121 | 2.09e-13 | 72.8 |
| MS.gene01344.t1 | AT3G11580 | 36.207 | 116 | 57 | 4 | 212 | 312 | 28 | 141 | 5.58e-13 | 69.7 |
| MS.gene01344.t1 | AT3G11580 | 36.207 | 116 | 57 | 4 | 212 | 312 | 28 | 141 | 5.58e-13 | 69.7 |
| MS.gene01344.t1 | AT3G11580 | 36.207 | 116 | 57 | 4 | 212 | 312 | 28 | 141 | 5.58e-13 | 69.7 |
| MS.gene01344.t1 | AT2G46870 | 39.560 | 91 | 50 | 3 | 212 | 299 | 34 | 122 | 7.91e-13 | 70.5 |
| MS.gene01344.t1 | AT3G11580 | 36.207 | 116 | 57 | 4 | 212 | 312 | 28 | 141 | 2.95e-12 | 69.7 |
| MS.gene01344.t1 | AT3G25730 | 39.362 | 94 | 49 | 4 | 212 | 299 | 182 | 273 | 3.52e-12 | 68.9 |
| MS.gene01344.t1 | AT1G25560 | 34.746 | 118 | 63 | 5 | 212 | 317 | 194 | 309 | 5.13e-12 | 68.6 |
Find 0 sgRNAs with CRISPR-Local
Find 514 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTTATTTTTTTT+TGG | + | 15218:4489-4508 | MS.gene01344:intron | 0.0% |
| !! | AACTTTATACAAATAGATAT+AGG | - | 15218:4539-4558 | MS.gene01344:intergenic | 15.0% |
| !! | AATAACTTTGACAAAATATA+TGG | + | 15218:1036-1055 | MS.gene01344:CDS | 15.0% |
| !! | AATTATGTATAAATCCATAT+CGG | + | 15218:1698-1717 | MS.gene01344:intron | 15.0% |
| !! | ACTTTAAATTCAATTTACTA+TGG | - | 15218:1930-1949 | MS.gene01344:intergenic | 15.0% |
| !! | AGCGTATTAATTTATATTAT+TGG | - | 15218:5122-5141 | MS.gene01344:intergenic | 15.0% |
| !! | ATATAATAAATTGCTAAACA+AGG | + | 15218:6713-6732 | MS.gene01344:intron | 15.0% |
| !! | ATATCTATTTGTATAAAGTT+CGG | + | 15218:4539-4558 | MS.gene01344:intron | 15.0% |
| !! | ATATTTCCTAATTACTATAA+CGG | + | 15218:4427-4446 | MS.gene01344:intron | 15.0% |
| !! | CTTTAAATTCAATTTACTAT+GGG | - | 15218:1929-1948 | MS.gene01344:intergenic | 15.0% |
| !! | TACTTATTAAGTAATTACAT+TGG | + | 15218:1644-1663 | MS.gene01344:intron | 15.0% |
| !! | TATAATAAATTGCTAAACAA+GGG | + | 15218:6714-6733 | MS.gene01344:intron | 15.0% |
| !! | TTAAATATCATGAAAAAGTA+AGG | - | 15218:2852-2871 | MS.gene01344:intergenic | 15.0% |
| !! | TTAATAAGTATGTAATTTGA+AGG | - | 15218:1634-1653 | MS.gene01344:intergenic | 15.0% |
| !! | TTTGTCAAAAAAAAATAGAA+AGG | - | 15218:4399-4418 | MS.gene01344:intergenic | 15.0% |
| !!! | ATTTTGTTGCATAATTTTTT+TGG | - | 15218:2579-2598 | MS.gene01344:intergenic | 15.0% |
| !!! | TATTGATTGCATATTTATAT+AGG | - | 15218:6510-6529 | MS.gene01344:intergenic | 15.0% |
| !!! | TTTTGTTGCATAATTTTTTT+GGG | - | 15218:2578-2597 | MS.gene01344:intergenic | 15.0% |
| !! | AAAACTGCATTAATAAAATC+AGG | + | 15218:2188-2207 | MS.gene01344:intron | 20.0% |
| !! | AAAGAGAAAAAACAACATAT+TGG | + | 15218:4842-4861 | MS.gene01344:CDS | 20.0% |
| !! | AAGAGAAAAAACAACATATT+GGG | + | 15218:4843-4862 | MS.gene01344:CDS | 20.0% |
| !! | TAAATAACTCATCCTTAATT+CGG | + | 15218:5691-5710 | MS.gene01344:intron | 20.0% |
| !! | TATTGTTAATTGCATTTGTT+TGG | + | 15218:6746-6765 | MS.gene01344:CDS | 20.0% |
| !! | TGAAATCAGAAATTACAAAA+GGG | - | 15218:4312-4331 | MS.gene01344:intergenic | 20.0% |
| !! | TGATAATCTTAAGATATTCT+TGG | + | 15218:3412-3431 | MS.gene01344:intron | 20.0% |
| !! | TTATTACAGAATTAGAACTA+GGG | - | 15218:1746-1765 | MS.gene01344:intergenic | 20.0% |
| !! | TTGAAATCAGAAATTACAAA+AGG | - | 15218:4313-4332 | MS.gene01344:intergenic | 20.0% |
| !! | TTGGGAAAAAATATAAGAAA+TGG | + | 15218:6354-6373 | MS.gene01344:intron | 20.0% |
| !! | TTTAGAAAACAGAAAACTTT+CGG | - | 15218:3497-3516 | MS.gene01344:intergenic | 20.0% |
| !!! | AGATGAATCTTTTTATAACA+TGG | + | 15218:1227-1246 | MS.gene01344:intron | 20.0% |
| !!! | ATTTTCACTAGTGATAATAT+GGG | + | 15218:5667-5686 | MS.gene01344:CDS | 20.0% |
| !!! | GATATAGATTTTTTTGGATA+TGG | + | 15218:4273-4292 | MS.gene01344:intron | 20.0% |
| !!! | TATTTTCACTAGTGATAATA+TGG | + | 15218:5666-5685 | MS.gene01344:CDS | 20.0% |
| !!! | TGCTTTGATATAGATTTTTT+TGG | + | 15218:4267-4286 | MS.gene01344:intron | 20.0% |
| !!! | TGTATTATTTTTATATGGTG+TGG | + | 15218:5764-5783 | MS.gene01344:intron | 20.0% |
| !!! | TTCAATTTTTATATGCTGTT+TGG | + | 15218:4328-4347 | MS.gene01344:intron | 20.0% |
| !!! | TTTGTTGCATAATTTTTTTG+GGG | - | 15218:2577-2596 | MS.gene01344:intergenic | 20.0% |
| !!! | TTTTTTTTTGACAAAAGTTG+TGG | + | 15218:4404-4423 | MS.gene01344:intron | 20.0% |
| ! | AACTATCCGTTATAGTAATT+AGG | - | 15218:4436-4455 | MS.gene01344:intergenic | 25.0% |
| ! | AATATAAGAAATGGAAGTAG+TGG | + | 15218:6363-6382 | MS.gene01344:intron | 25.0% |
| ! | AATATCATGAAAAAGTAAGG+TGG | - | 15218:2849-2868 | MS.gene01344:intergenic | 25.0% |
| ! | AATGAAAGAAATGGTCAAAT+TGG | + | 15218:1403-1422 | MS.gene01344:CDS | 25.0% |
| ! | AATTAATACGCTTTCATCTT+CGG | + | 15218:5130-5149 | MS.gene01344:intron | 25.0% |
| ! | AATTCAAACCTGAATTACAA+GGG | - | 15218:6632-6651 | MS.gene01344:intergenic | 25.0% |
| ! | ACAAAATATATGGCAATGAA+AGG | + | 15218:1046-1065 | MS.gene01344:CDS | 25.0% |
| ! | ACGTCTAAAAATTGAAAATG+AGG | + | 15218:4878-4897 | MS.gene01344:CDS | 25.0% |
| ! | ATCATTGGAAAAGAAAAATG+AGG | + | 15218:1080-1099 | MS.gene01344:CDS | 25.0% |
| ! | ATGAAAGAAATGGTCAAATT+GGG | + | 15218:1404-1423 | MS.gene01344:CDS | 25.0% |
| ! | ATTATTTCGTTCCTTACAAA+GGG | - | 15218:3380-3399 | MS.gene01344:intergenic | 25.0% |
| ! | ATTTGACCATTTCTTTCATT+TGG | - | 15218:1403-1422 | MS.gene01344:intergenic | 25.0% |
| ! | ATTTGATCAAAACCGAATTA+AGG | - | 15218:5706-5725 | MS.gene01344:intergenic | 25.0% |
| ! | CAAAAAGAAAAATACGTGAA+CGG | - | 15218:4596-4615 | MS.gene01344:intergenic | 25.0% |
| ! | CTATTTGGTCATAAATCATA+CGG | - | 15218:2406-2425 | MS.gene01344:intergenic | 25.0% |
| ! | GAGTAAAACTTAAGCTTAAT+GGG | + | 15218:3160-3179 | MS.gene01344:intron | 25.0% |
| ! | GAGTTAATTATCTTGTATTG+TGG | + | 15218:3897-3916 | MS.gene01344:intron | 25.0% |
| ! | GTTATTACAGAATTAGAACT+AGG | - | 15218:1747-1766 | MS.gene01344:intergenic | 25.0% |
| ! | TAATTTGAGTGTACATTGTA+TGG | + | 15218:4061-4080 | MS.gene01344:intron | 25.0% |
| ! | TGAGTAAAACTTAAGCTTAA+TGG | + | 15218:3159-3178 | MS.gene01344:intron | 25.0% |
| ! | TTATCACTAGTGAAAATAGA+TGG | - | 15218:5664-5683 | MS.gene01344:intergenic | 25.0% |
| ! | TTCTTAAAGCATATGAACTT+TGG | - | 15218:2636-2655 | MS.gene01344:intergenic | 25.0% |
| ! | TTTGACCATTTCTTTCATTT+GGG | - | 15218:1402-1421 | MS.gene01344:intergenic | 25.0% |
| !! | AATTAAGTTCTGATTTAGAC+TGG | + | 15218:6099-6118 | MS.gene01344:intron | 25.0% |
| !! | ATCTTTTTATAACATGGAGA+TGG | + | 15218:1233-1252 | MS.gene01344:intron | 25.0% |
| !! | ATTAAGTTCTGATTTAGACT+GGG | + | 15218:6100-6119 | MS.gene01344:intron | 25.0% |
| !! | ATTTTTCTTTTCCAATGATG+AGG | - | 15218:1079-1098 | MS.gene01344:intergenic | 25.0% |
| !! | GTTTCTTGTGTCTTTAAAAA+AGG | + | 15218:3342-3361 | MS.gene01344:intron | 25.0% |
| !! | TACTTAAAGAAAGCACATTT+AGG | - | 15218:5097-5116 | MS.gene01344:intergenic | 25.0% |
| !! | TAGTCTTTTAATGTTTTGCA+TGG | + | 15218:2818-2837 | MS.gene01344:intron | 25.0% |
| !! | TCTATCTTTAGCTTAATGTA+TGG | + | 15218:2307-2326 | MS.gene01344:intron | 25.0% |
| !! | TTACAAGTCTTATAACAACA+TGG | - | 15218:5277-5296 | MS.gene01344:intergenic | 25.0% |
| !! | TTTTCACTAGTGATAATATG+GGG | + | 15218:5668-5687 | MS.gene01344:CDS | 25.0% |
| !! | TTTTTCTTTTCCAATGATGA+GGG | - | 15218:1078-1097 | MS.gene01344:intergenic | 25.0% |
| !!! | ATTGTATTTTTGTGCATTGA+AGG | + | 15218:2522-2541 | MS.gene01344:intron | 25.0% |
| !!! | GGCTAGTTTTATATAAACAA+AGG | - | 15218:5173-5192 | MS.gene01344:intergenic | 25.0% |
| !!! | GTTCATATGCTTTAAGAAAA+TGG | + | 15218:2638-2657 | MS.gene01344:intron | 25.0% |
| !!! | TTGTTGCATAATTTTTTTGG+GGG | - | 15218:2576-2595 | MS.gene01344:intergenic | 25.0% |
| AAGAAAAATGAGGATTTGTC+TGG | + | 15218:1090-1109 | MS.gene01344:CDS | 30.0% | |
| AAGCTAAAGATAGACCATTT+AGG | - | 15218:2301-2320 | MS.gene01344:intergenic | 30.0% | |
| AATAACCTAGGAAGACTATT+TGG | - | 15218:2421-2440 | MS.gene01344:intergenic | 30.0% | |
| AATAAGCATGGAATAAGTTG+AGG | - | 15218:6467-6486 | MS.gene01344:intergenic | 30.0% | |
| ACAGAGATGATAAATAACCT+AGG | - | 15218:2433-2452 | MS.gene01344:intergenic | 30.0% | |
| ACCTGTATTACTATTATGCA+AGG | - | 15218:7153-7172 | MS.gene01344:intergenic | 30.0% | |
| ACTAATTTACATGCCAAACA+AGG | - | 15218:2047-2066 | MS.gene01344:intergenic | 30.0% | |
| AGATATTGTACATTCCGATA+TGG | - | 15218:1715-1734 | MS.gene01344:intergenic | 30.0% | |
| ATAAATTTCCTTCATGCCAT+TGG | - | 15218:3101-3120 | MS.gene01344:intergenic | 30.0% | |
| ATACCTACAATTCTAAACGA+GGG | - | 15218:3213-3232 | MS.gene01344:intergenic | 30.0% | |
| ATATGCCTAGTATTAGAACT+TGG | - | 15218:3724-3743 | MS.gene01344:intergenic | 30.0% | |
| ATATTACATACACCATGACA+AGG | - | 15218:6690-6709 | MS.gene01344:intergenic | 30.0% | |
| ATCTCTGTTAATCTGTCTTT+GGG | + | 15218:2445-2464 | MS.gene01344:intron | 30.0% | |
| ATTCAAACCTGAATTACAAG+GGG | - | 15218:6631-6650 | MS.gene01344:intergenic | 30.0% | |
| CAATCAAATCCAAAACATCA+TGG | - | 15218:5863-5882 | MS.gene01344:intergenic | 30.0% | |
| CAATTCAAACCTGAATTACA+AGG | - | 15218:6633-6652 | MS.gene01344:intergenic | 30.0% | |
| GAAAAAGTAAACAGTTGAGA+AGG | - | 15218:1188-1207 | MS.gene01344:intergenic | 30.0% | |
| GAAACGTGTACTAAATTGTA+TGG | + | 15218:4143-4162 | MS.gene01344:intron | 30.0% | |
| GACATGTTCAGATAATTCAT+GGG | + | 15218:6264-6283 | MS.gene01344:CDS | 30.0% | |
| GATAATGAAGCTAATAAGAC+TGG | + | 15218:4619-4638 | MS.gene01344:CDS | 30.0% | |
| GATTATTTCGTTCCTTACAA+AGG | - | 15218:3381-3400 | MS.gene01344:intergenic | 30.0% | |
| GGATAGTTTATGCATGAAAT+TGG | + | 15218:4218-4237 | MS.gene01344:intron | 30.0% | |
| GTTAGAAACATGTACTGAAT+CGG | + | 15218:4240-4259 | MS.gene01344:intron | 30.0% | |
| TAAAGATAGACCATTTAGGT+GGG | - | 15218:2297-2316 | MS.gene01344:intergenic | 30.0% | |
| TAAAGCATATGAACTTTGGT+GGG | - | 15218:2632-2651 | MS.gene01344:intergenic | 30.0% | |
| TAAATTGCTAAACAAGGGTA+TGG | + | 15218:6719-6738 | MS.gene01344:intron | 30.0% | |
| TAAGGTACAGATAAACCAAA+CGG | - | 15218:1373-1392 | MS.gene01344:intergenic | 30.0% | |
| TAATAGAGCTGAAGATTACA+TGG | + | 15218:4904-4923 | MS.gene01344:CDS | 30.0% | |
| TATACCTACAATTCTAAACG+AGG | - | 15218:3214-3233 | MS.gene01344:intergenic | 30.0% | |
| TATGCCTAGTATTAGAACTT+GGG | - | 15218:3723-3742 | MS.gene01344:intergenic | 30.0% | |
| TATGGCTAATCTTATAGTGT+TGG | + | 15218:4367-4386 | MS.gene01344:intron | 30.0% | |
| TCAAGCAAAATTTCAGATGA+AGG | - | 15218:7122-7141 | MS.gene01344:intergenic | 30.0% | |
| TCCAAGATCATATCAGTATA+AGG | - | 15218:2475-2494 | MS.gene01344:intergenic | 30.0% | |
| TCCTTATACTGATATGATCT+TGG | + | 15218:2471-2490 | MS.gene01344:intron | 30.0% | |
| TCCTTGCATAATAGTAATAC+AGG | + | 15218:7149-7168 | MS.gene01344:CDS | 30.0% | |
| TGAAAGAAATGGTCAAATTG+GGG | + | 15218:1405-1424 | MS.gene01344:CDS | 30.0% | |
| TTAAAGCATATGAACTTTGG+TGG | - | 15218:2633-2652 | MS.gene01344:intergenic | 30.0% | |
| TTCAATAGATTGTAGAAACC+AGG | + | 15218:2159-2178 | MS.gene01344:intron | 30.0% | |
| TTGACCATTTCTTTCATTTG+GGG | - | 15218:1401-1420 | MS.gene01344:intergenic | 30.0% | |
| TTGCATCACACTATATTTCA+AGG | - | 15218:2731-2750 | MS.gene01344:intergenic | 30.0% | |
| TTGCTTATGAACAGTAATAC+AGG | + | 15218:1156-1175 | MS.gene01344:CDS | 30.0% | |
| TTGTTTGGATAGTTTATGCT+TGG | + | 15218:4111-4130 | MS.gene01344:intron | 30.0% | |
| TTTAAAAAAGGACAACGAAC+AGG | + | 15218:3354-3373 | MS.gene01344:intron | 30.0% | |
| TTTAAAGACACAAGAAACAC+AGG | - | 15218:3340-3359 | MS.gene01344:intergenic | 30.0% | |
| TTTCAACTAAGAACGCAAAA+TGG | - | 15218:5241-5260 | MS.gene01344:intergenic | 30.0% | |
| ! | AAGCTTAAGTTTTACTCAGA+AGG | - | 15218:3157-3176 | MS.gene01344:intergenic | 30.0% |
| ! | ACATGTAAAACAGATTGGTT+GGG | + | 15218:6336-6355 | MS.gene01344:intron | 30.0% |
| ! | ACTATTTTGTTGAAGTCACT+TGG | + | 15218:5490-5509 | MS.gene01344:intron | 30.0% |
| ! | AGATCAATTTGGCCTTTAAA+CGG | - | 15218:7254-7273 | MS.gene01344:intergenic | 30.0% |
| ! | AGCTTTAACTGGAATTTATG+TGG | + | 15218:4197-4216 | MS.gene01344:intron | 30.0% |
| ! | ATTACACACTCGTATCATTT+TGG | + | 15218:2753-2772 | MS.gene01344:intron | 30.0% |
| ! | CGTTTAGAATTGTAGGTATA+GGG | + | 15218:3214-3233 | MS.gene01344:intron | 30.0% |
| ! | TAATAACGACCATGATGTTT+TGG | + | 15218:5851-5870 | MS.gene01344:intron | 30.0% |
| ! | TACATTCTGCTGTTGTTATT+CGG | - | 15218:3014-3033 | MS.gene01344:intergenic | 30.0% |
| ! | TCACGTATTTTTCTTTTTGC+AGG | + | 15218:4597-4616 | MS.gene01344:intron | 30.0% |
| ! | TCGTTTAGAATTGTAGGTAT+AGG | + | 15218:3213-3232 | MS.gene01344:intron | 30.0% |
| ! | TTAAGTTCTGATTTAGACTG+GGG | + | 15218:6101-6120 | MS.gene01344:intron | 30.0% |
| ! | TTAAGTTTTACTCAGAAGGA+AGG | - | 15218:3153-3172 | MS.gene01344:intergenic | 30.0% |
| ! | TTTAGCTTAATGTATGGTAG+AGG | + | 15218:2313-2332 | MS.gene01344:intron | 30.0% |
| ! | TTTTCTTTTCCAATGATGAG+GGG | - | 15218:1077-1096 | MS.gene01344:intergenic | 30.0% |
| !! | AGCAGAATGTATGTTTTAGA+GGG | + | 15218:3023-3042 | MS.gene01344:CDS | 30.0% |
| !! | CGGTTTTGATCAAATTGTAT+TGG | + | 15218:5711-5730 | MS.gene01344:intron | 30.0% |
| !! | TAAAAGCATTCTCAGCATAA+AGG | - | 15218:5617-5636 | MS.gene01344:intergenic | 30.0% |
| !! | TGACTTTTGAGTGTTTATGA+AGG | + | 15218:5912-5931 | MS.gene01344:intron | 30.0% |
| !!! | ACTCAAAGTTTTTTGGAACA+AGG | - | 15218:1772-1791 | MS.gene01344:intergenic | 30.0% |
| !!! | ACTTTTTCAGTTACAGGTTT+AGG | + | 15218:1200-1219 | MS.gene01344:intron | 30.0% |
| !!! | CTCAAAGTTTTTTGGAACAA+GGG | - | 15218:1771-1790 | MS.gene01344:intergenic | 30.0% |
| !!! | CTGTTTACTTTTTCAGTTAC+AGG | + | 15218:1194-1213 | MS.gene01344:intron | 30.0% |
| !!! | GTACTTTATTTTCCAGTGAA+AGG | + | 15218:6167-6186 | MS.gene01344:intron | 30.0% |
| !!! | TGTTGCATAATTTTTTTGGG+GGG | - | 15218:2575-2594 | MS.gene01344:intergenic | 30.0% |
| AAGTCACAGACATAACAAAC+AGG | + | 15218:5315-5334 | MS.gene01344:intron | 35.0% | |
| AATCGCCCTGAATATGTTAT+TGG | + | 15218:3254-3273 | MS.gene01344:intron | 35.0% | |
| AATGTGAAGATTGTCTGAAG+TGG | + | 15218:6203-6222 | MS.gene01344:CDS | 35.0% | |
| ACAACTAATCAACCACAACA+AGG | - | 15218:3877-3896 | MS.gene01344:intergenic | 35.0% | |
| ACACCCCAATAACATATTCA+GGG | - | 15218:3262-3281 | MS.gene01344:intergenic | 35.0% | |
| ACAGGGAATTAAAGTGATGA+AGG | + | 15218:5333-5352 | MS.gene01344:intron | 35.0% | |
| ACTCAACAACAATAGTCAAC+AGG | - | 15218:5815-5834 | MS.gene01344:intergenic | 35.0% | |
| AGCAGTTTCCAAGAAAATGA+AGG | + | 15218:6770-6789 | MS.gene01344:CDS | 35.0% | |
| AGCTAATTGGAATGTCAAAC+TGG | + | 15218:1119-1138 | MS.gene01344:CDS | 35.0% | |
| AGGATGTGTTAACAAGTGAA+TGG | - | 15218:6313-6332 | MS.gene01344:intergenic | 35.0% | |
| AGTATACTGAATCCTTTCAC+TGG | - | 15218:6182-6201 | MS.gene01344:intergenic | 35.0% | |
| AGTCACAGACATAACAAACA+GGG | + | 15218:5316-5335 | MS.gene01344:intron | 35.0% | |
| ATAATTCATGGGATCCAGAA+AGG | + | 15218:6275-6294 | MS.gene01344:CDS | 35.0% | |
| ATAGATTGTAGAAACCAGGA+AGG | + | 15218:2163-2182 | MS.gene01344:intron | 35.0% | |
| ATCAGTGTACCAAAGTTACA+GGG | - | 15218:2019-2038 | MS.gene01344:intergenic | 35.0% | |
| ATCGCCCTGAATATGTTATT+GGG | + | 15218:3255-3274 | MS.gene01344:intron | 35.0% | |
| ATCTGCATTGTCTAATTGTC+TGG | + | 15218:4028-4047 | MS.gene01344:intron | 35.0% | |
| ATGAGAATTGCTATGCATTG+TGG | + | 15218:5588-5607 | MS.gene01344:intron | 35.0% | |
| ATGGTTGAGTGTAGATTGTA+TGG | + | 15218:4162-4181 | MS.gene01344:intron | 35.0% | |
| ATGTGGTGCTTATAAAGCTT+GGG | + | 15218:3650-3669 | MS.gene01344:intron | 35.0% | |
| CAAATTAATAGCTAGCAGAG+AGG | - | 15218:1863-1882 | MS.gene01344:intergenic | 35.0% | |
| CAATGCAGATATTACCTGAT+CGG | - | 15218:4018-4037 | MS.gene01344:intergenic | 35.0% | |
| CACATGTAAAACAGATTGGT+TGG | + | 15218:6335-6354 | MS.gene01344:intron | 35.0% | |
| CACATGTAATGTCTGTCTAA+CGG | + | 15218:6989-7008 | MS.gene01344:CDS | 35.0% | |
| CAGTAGTCATAATGCTGATA+AGG | + | 15218:7487-7506 | MS.gene01344:CDS | 35.0% | |
| CATCACAAATGATCTTCAAC+TGG | + | 15218:5378-5397 | MS.gene01344:intron | 35.0% | |
| CATCTCTGTTAATCTGTCTT+TGG | + | 15218:2444-2463 | MS.gene01344:intron | 35.0% | |
| CGTGTTTAAATATGTGCCAA+CGG | + | 15218:1314-1333 | MS.gene01344:CDS | 35.0% | |
| CGTTGGCACATATTTAAACA+CGG | - | 15218:1316-1335 | MS.gene01344:intergenic | 35.0% | |
| CTAAAGATAGACCATTTAGG+TGG | - | 15218:2298-2317 | MS.gene01344:intergenic | 35.0% | |
| CTAACTCAACCTTACAAAAC+TGG | - | 15218:3694-3713 | MS.gene01344:intergenic | 35.0% | |
| CTAGTATTAGAACTTGGGTT+GGG | - | 15218:3718-3737 | MS.gene01344:intergenic | 35.0% | |
| CTGAAACAAAGCAAGAGAAA+TGG | - | 15218:5020-5039 | MS.gene01344:intergenic | 35.0% | |
| CTGCAATACAACAAAGAATC+CGG | - | 15218:1267-1286 | MS.gene01344:intergenic | 35.0% | |
| CTTAAAATCCTCGATGCAAA+AGG | + | 15218:2957-2976 | MS.gene01344:CDS | 35.0% | |
| CTTCCACATGTAAAACAGAT+TGG | + | 15218:6331-6350 | MS.gene01344:intron | 35.0% | |
| CTTTCATTTGGGGATGAATA+AGG | - | 15218:1391-1410 | MS.gene01344:intergenic | 35.0% | |
| GAAAACAGAAAACTTTCGGA+TGG | - | 15218:3493-3512 | MS.gene01344:intergenic | 35.0% | |
| GAACAACTCCAAAGTATGTA+GGG | - | 15218:3443-3462 | MS.gene01344:intergenic | 35.0% | |
| GAAGCTAATAAGACTGGAAA+CGG | + | 15218:4625-4644 | MS.gene01344:CDS | 35.0% | |
| GATAGATGAAAAATGCAACC+AGG | - | 15218:4724-4743 | MS.gene01344:intergenic | 35.0% | |
| GATTCAACAGGGATTATTTG+AGG | - | 15218:3795-3814 | MS.gene01344:intergenic | 35.0% | |
| GCTAATTGGAATGTCAAACT+GGG | + | 15218:1120-1139 | MS.gene01344:CDS | 35.0% | |
| GCTGGATATTGAGATCAATT+TGG | - | 15218:7265-7284 | MS.gene01344:intergenic | 35.0% | |
| GGACATGTTCAGATAATTCA+TGG | + | 15218:6263-6282 | MS.gene01344:CDS | 35.0% | |
| GGATAGTTTATGCTTGGAAT+TGG | + | 15218:4117-4136 | MS.gene01344:intron | 35.0% | |
| GTCTGTGTTGTAATCTTTCT+TGG | + | 15218:5542-5561 | MS.gene01344:intron | 35.0% | |
| GTGTACATTGTATGGTTGAA+TGG | + | 15218:4069-4088 | MS.gene01344:intron | 35.0% | |
| GTTGGTTATGGGATTTAGAA+AGG | + | 15218:3974-3993 | MS.gene01344:CDS | 35.0% | |
| TACACCCCAATAACATATTC+AGG | - | 15218:3263-3282 | MS.gene01344:intergenic | 35.0% | |
| TAGAATTGTAGGTATAGGGT+TGG | + | 15218:3218-3237 | MS.gene01344:intron | 35.0% | |
| TAGATTGTAGAAACCAGGAA+GGG | + | 15218:2164-2183 | MS.gene01344:intron | 35.0% | |
| TAGTATCTATGTTCACAGAC+AGG | - | 15218:5474-5493 | MS.gene01344:intergenic | 35.0% | |
| TATCAGTGTACCAAAGTTAC+AGG | - | 15218:2020-2039 | MS.gene01344:intergenic | 35.0% | |
| TATGACCAAATAGTCTTCCT+AGG | + | 15218:2413-2432 | MS.gene01344:intron | 35.0% | |
| TATGTGGTGCTTATAAAGCT+TGG | + | 15218:3649-3668 | MS.gene01344:intron | 35.0% | |
| TATTGCTGTGCATGTTTATC+AGG | + | 15218:6027-6046 | MS.gene01344:intron | 35.0% | |
| TCATCCCCAAATGAAAGAAA+TGG | + | 15218:1394-1413 | MS.gene01344:CDS | 35.0% | |
| TCTCTGTTAATCTGTCTTTG+GGG | + | 15218:2446-2465 | MS.gene01344:intron | 35.0% | |
| TCTGCATTGTCTAATTGTCT+GGG | + | 15218:4029-4048 | MS.gene01344:intron | 35.0% | |
| TGAACAACTCCAAAGTATGT+AGG | - | 15218:3444-3463 | MS.gene01344:intergenic | 35.0% | |
| TGAATGGAACTAACTTCAAC+TGG | + | 15218:4085-4104 | MS.gene01344:intron | 35.0% | |
| TTAGTGTATACTGCACAATG+TGG | + | 15218:2062-2081 | MS.gene01344:intron | 35.0% | |
| TTGAGTGTAGATTGTATGGT+TGG | + | 15218:4166-4185 | MS.gene01344:intron | 35.0% | |
| TTTGTTACCCCTTGTAATTC+AGG | + | 15218:6621-6640 | MS.gene01344:CDS | 35.0% | |
| ! | AACTTCAACTGGAACTTGTT+TGG | + | 15218:4096-4115 | MS.gene01344:intron | 35.0% |
| ! | AAGCTTTATAAGCACCACAT+AGG | - | 15218:3650-3669 | MS.gene01344:intergenic | 35.0% |
| ! | ATAACTTGCCTGATAACACT+AGG | + | 15218:3529-3548 | MS.gene01344:intron | 35.0% |
| ! | ATACATAGCAAAAGAAGCAC+TGG | + | 15218:4797-4816 | MS.gene01344:CDS | 35.0% |
| ! | CAACCAATCTGTTTTACATG+TGG | - | 15218:6337-6356 | MS.gene01344:intergenic | 35.0% |
| ! | CAATCTGTTTTACATGTGGA+AGG | - | 15218:6333-6352 | MS.gene01344:intergenic | 35.0% |
| ! | CTTTGAGTTTGAGGAATATG+AGG | + | 15218:4992-5011 | MS.gene01344:CDS | 35.0% |
| ! | GCATTTTTCATCTATCGCTT+AGG | + | 15218:4728-4747 | MS.gene01344:intron | 35.0% |
| ! | GTTTTTGTGGCAAGTTCTTA+TGG | + | 15218:2090-2109 | MS.gene01344:intron | 35.0% |
| ! | TAAGTTCTGATTTAGACTGG+GGG | + | 15218:6102-6121 | MS.gene01344:intron | 35.0% |
| ! | TATCATTTTGGATTGCTCTG+TGG | + | 15218:2765-2784 | MS.gene01344:intron | 35.0% |
| ! | TATGCTGAGAATGCTTTTAC+AGG | + | 15218:5618-5637 | MS.gene01344:intron | 35.0% |
| ! | TGTCATTTAAGTCTCATACC+TGG | + | 15218:4703-4722 | MS.gene01344:intron | 35.0% |
| ! | TGTCTGGAATATCAGCTAAT+TGG | + | 15218:1106-1125 | MS.gene01344:CDS | 35.0% |
| ! | TTTCTTTTCCAATGATGAGG+GGG | - | 15218:1076-1095 | MS.gene01344:intergenic | 35.0% |
| ! | TTTGCATCGAGGATTTTAAG+AGG | - | 15218:2957-2976 | MS.gene01344:intergenic | 35.0% |
| ! | TTTGTTGTATTGCAGGAATG+AGG | + | 15218:1272-1291 | MS.gene01344:intron | 35.0% |
| ! | TTTTCAGTTACAGGTTTAGG+AGG | + | 15218:1203-1222 | MS.gene01344:intron | 35.0% |
| ! | TTTTCGCAGTAACATTTAGC+CGG | + | 15218:3934-3953 | MS.gene01344:intron | 35.0% |
| !! | ATCTATCGCTTAGGTTGAAT+TGG | + | 15218:4737-4756 | MS.gene01344:intron | 35.0% |
| !! | ATTTTAAGAGGTAACCCTTC+AGG | - | 15218:2945-2964 | MS.gene01344:intergenic | 35.0% |
| !! | CAGCAGAATGTATGTTTTAG+AGG | + | 15218:3022-3041 | MS.gene01344:CDS | 35.0% |
| !! | CAGTTTTGTAAGGTTGAGTT+AGG | + | 15218:3692-3711 | MS.gene01344:intron | 35.0% |
| !! | CTCTTGCTTTGTTTCAGAAA+TGG | + | 15218:5023-5042 | MS.gene01344:intron | 35.0% |
| !! | GAATCTTCCTTTAGAGTATG+AGG | - | 15218:1340-1359 | MS.gene01344:intergenic | 35.0% |
| !! | GTTTGTTATGTCTGTGACTT+AGG | - | 15218:5315-5334 | MS.gene01344:intergenic | 35.0% |
| !! | TACATAGCAAAAGAAGCACT+GGG | + | 15218:4798-4817 | MS.gene01344:CDS | 35.0% |
| !!! | CAATGTGGTGTTAGTTTTTG+TGG | + | 15218:2077-2096 | MS.gene01344:intron | 35.0% |
| !!! | TCTTCAACTGGTTTTAGTTG+AGG | + | 15218:5390-5409 | MS.gene01344:intron | 35.0% |
| AAAAGTTGGAGTCAGTTAGC+TGG | + | 15218:916-935 | MS.gene01344:CDS | 40.0% | |
| AATCAACCACAACAAGGTTG+TGG | - | 15218:3871-3890 | MS.gene01344:intergenic | 40.0% | |
| AATCCTCGATGCAAAAGGAA+AGG | + | 15218:2962-2981 | MS.gene01344:CDS | 40.0% | |
| AATGGTCAAATTGGGGTAAC+TGG | + | 15218:1412-1431 | MS.gene01344:CDS | 40.0% | |
| ACAATGCTTGGGACATGATT+AGG | - | 15218:4960-4979 | MS.gene01344:intergenic | 40.0% | |
| ACACGTTCATAGACAAAGAC+TGG | - | 15218:7520-7539 | MS.gene01344:intergenic | 40.0% | |
| ACACTGATAAGCTCCTTGTT+TGG | + | 15218:2031-2050 | MS.gene01344:intron | 40.0% | |
| ACTACCCAAAAAATGTGCTG+AGG | + | 15218:1824-1843 | MS.gene01344:CDS | 40.0% | |
| ACTTGCAAATCTAGCAATCC+TGG | + | 15218:6842-6861 | MS.gene01344:CDS | 40.0% | |
| ACTTTGTTGAACTCTGGTAC+TGG | + | 15218:7383-7402 | MS.gene01344:CDS | 40.0% | |
| AGAAGCTGAATTGAACAGAC+TGG | - | 15218:971-990 | MS.gene01344:intergenic | 40.0% | |
| ATGAGGAATGAGGACAAATC+AGG | + | 15218:1289-1308 | MS.gene01344:CDS | 40.0% | |
| ATGTCTCAGATTCCTTGTCA+TGG | + | 15218:6675-6694 | MS.gene01344:intron | 40.0% | |
| ATTACATGGCAAGAAGCTCA+AGG | + | 15218:4918-4937 | MS.gene01344:CDS | 40.0% | |
| CAACCTAAATGCCAGCAATT+AGG | - | 15218:3595-3614 | MS.gene01344:intergenic | 40.0% | |
| CACGTTCATAGACAAAGACT+GGG | - | 15218:7519-7538 | MS.gene01344:intergenic | 40.0% | |
| CATTTACCTCTTGACTCATC+AGG | + | 15218:1490-1509 | MS.gene01344:CDS | 40.0% | |
| CCTAGTATTAGAACTTGGGT+TGG | - | 15218:3719-3738 | MS.gene01344:intergenic | 40.0% | |
| CTTCAATCACCACAATGCTT+GGG | - | 15218:4971-4990 | MS.gene01344:intergenic | 40.0% | |
| CTTGCAAATCTAGCAATCCT+GGG | + | 15218:6843-6862 | MS.gene01344:CDS | 40.0% | |
| GAACTATATCTCCTGCATCA+TGG | - | 15218:5216-5235 | MS.gene01344:intergenic | 40.0% | |
| GAAGCTGAATTGAACAGACT+GGG | - | 15218:970-989 | MS.gene01344:intergenic | 40.0% | |
| GAATGTCAAACTGGGTTCAA+GGG | + | 15218:1128-1147 | MS.gene01344:CDS | 40.0% | |
| GATTCATCTTCTCAACCGTT+TGG | + | 15218:1355-1374 | MS.gene01344:CDS | 40.0% | |
| GCAAGAGATTTATGACATGC+AGG | - | 15218:1990-2009 | MS.gene01344:intergenic | 40.0% | |
| GGATTCAGCTCAGGTTAATA+TGG | + | 15218:4349-4368 | MS.gene01344:intron | 40.0% | |
| GGATTTGTGGGATTACTTCT+GGG | + | 15218:2786-2805 | MS.gene01344:intron | 40.0% | |
| GGTACAACACAGGATACAAT+GGG | - | 15218:3850-3869 | MS.gene01344:intergenic | 40.0% | |
| GTGCTTTGTGCAAATAAGCA+TGG | - | 15218:6479-6498 | MS.gene01344:intergenic | 40.0% | |
| GTGTAGATTGTATGGTTGGA+TGG | + | 15218:4170-4189 | MS.gene01344:intron | 40.0% | |
| GTTACTGCGAAAATCAGTTC+AGG | - | 15218:3927-3946 | MS.gene01344:intergenic | 40.0% | |
| GTTTCCGTACCCTTATGTTA+CGG | + | 15218:7021-7040 | MS.gene01344:CDS | 40.0% | |
| TAGACCATTTAGGTGGGAAT+TGG | - | 15218:2291-2310 | MS.gene01344:intergenic | 40.0% | |
| TAGTAGCCCAACTATGAACA+AGG | + | 15218:7175-7194 | MS.gene01344:CDS | 40.0% | |
| TATTGCAGGAATGAGGAATG+AGG | + | 15218:1279-1298 | MS.gene01344:intron | 40.0% | |
| TCAACATTTGACCAGGAACT+AGG | - | 15218:4768-4787 | MS.gene01344:intergenic | 40.0% | |
| TCAACTAGAGAATGCACATC+TGG | - | 15218:1009-1028 | MS.gene01344:intergenic | 40.0% | |
| TCGATGCAAAAGGAAAGGAA+TGG | + | 15218:2967-2986 | MS.gene01344:CDS | 40.0% | |
| TCGCCCTGAATATGTTATTG+GGG | + | 15218:3256-3275 | MS.gene01344:intron | 40.0% | |
| TGGATTTGTGGGATTACTTC+TGG | + | 15218:2785-2804 | MS.gene01344:intron | 40.0% | |
| TGGTACAACACAGGATACAA+TGG | - | 15218:3851-3870 | MS.gene01344:intergenic | 40.0% | |
| TGGTCAAATGTTGACAAGTC+AGG | + | 15218:4774-4793 | MS.gene01344:CDS | 40.0% | |
| TTAGCCAATTCCCACCTAAA+TGG | + | 15218:2284-2303 | MS.gene01344:intron | 40.0% | |
| TTCCAACACCTAGTGTTATC+AGG | - | 15218:3540-3559 | MS.gene01344:intergenic | 40.0% | |
| TTGCAAATCTAGCAATCCTG+GGG | + | 15218:6844-6863 | MS.gene01344:CDS | 40.0% | |
| ! | AAAAGTCAATGCTAGTCTCC+AGG | - | 15218:5900-5919 | MS.gene01344:intergenic | 40.0% |
| ! | AATGCTTTTACAGGATGCTC+CGG | + | 15218:5627-5646 | MS.gene01344:intron | 40.0% |
| ! | ATGTTTGTTACAGCGCTTCT+AGG | + | 15218:3748-3767 | MS.gene01344:intron | 40.0% |
| ! | ATTCCTTTCCTTTTGCATCG+AGG | - | 15218:2968-2987 | MS.gene01344:intergenic | 40.0% |
| ! | CCAACCCAAGTTCTAATACT+AGG | + | 15218:3716-3735 | MS.gene01344:intron | 40.0% |
| ! | CGGATTCTTTGTTGTATTGC+AGG | + | 15218:1265-1284 | MS.gene01344:intron | 40.0% |
| ! | CTCTCATGCTGATGTTTTCT+TGG | - | 15218:2256-2275 | MS.gene01344:intergenic | 40.0% |
| ! | CTTAATGGGTCAGATATGCA+CGG | + | 15218:3174-3193 | MS.gene01344:intron | 40.0% |
| ! | CTTAGTGGCCTTCATTTTCT+TGG | - | 15218:6781-6800 | MS.gene01344:intergenic | 40.0% |
| ! | GAGACACGGATGATTTTATC+CGG | - | 15218:7232-7251 | MS.gene01344:intergenic | 40.0% |
| ! | TAATCATGTCCCAAGCATTG+TGG | + | 15218:4959-4978 | MS.gene01344:CDS | 40.0% |
| ! | TAATGCAGTTTTACCCTTCC+TGG | - | 15218:2180-2199 | MS.gene01344:intergenic | 40.0% |
| ! | TCACTTGGCTCGTCTTATAT+TGG | + | 15218:5505-5524 | MS.gene01344:intron | 40.0% |
| ! | TCTGAACATGTCCATTTTGC+TGG | - | 15218:6256-6275 | MS.gene01344:intergenic | 40.0% |
| ! | TGACTTGTCAACATTTGACC+AGG | - | 15218:4775-4794 | MS.gene01344:intergenic | 40.0% |
| ! | TGGAATAAGTTGAGGAAGAC+TGG | - | 15218:6459-6478 | MS.gene01344:intergenic | 40.0% |
| ! | TTCTTTTCCAATGATGAGGG+GGG | - | 15218:1075-1094 | MS.gene01344:intergenic | 40.0% |
| !! | AAAACTGGCTTGTAAGGTGA+CGG | - | 15218:3679-3698 | MS.gene01344:intergenic | 40.0% |
| !! | ACATAAAAGCACCCAAGACA+AGG | - | 15218:3817-3836 | MS.gene01344:intergenic | 40.0% |
| !! | ACATAGCAAAAGAAGCACTG+GGG | + | 15218:4799-4818 | MS.gene01344:CDS | 40.0% |
| !! | CCTTACAAAACTGGCTTGTA+AGG | - | 15218:3685-3704 | MS.gene01344:intergenic | 40.0% |
| !! | CCTTACAAGCCAGTTTTGTA+AGG | + | 15218:3682-3701 | MS.gene01344:intron | 40.0% |
| !! | CTTAGCAACGGTGTTATTCA+TGG | + | 15218:7461-7480 | MS.gene01344:CDS | 40.0% |
| !! | GATTGAAGGCTTTGAGTTTG+AGG | + | 15218:4983-5002 | MS.gene01344:CDS | 40.0% |
| !! | TGCTTTTTGCCCTGTAACTT+TGG | + | 15218:2007-2026 | MS.gene01344:intron | 40.0% |
| !! | TGGATGGAACTAGCTTTAAC+TGG | + | 15218:4186-4205 | MS.gene01344:intron | 40.0% |
| !!! | ACCAACCTCAGCACATTTTT+TGG | - | 15218:1832-1851 | MS.gene01344:intergenic | 40.0% |
| !!! | CACTGGCACTCAAAGTTTTT+TGG | - | 15218:1779-1798 | MS.gene01344:intergenic | 40.0% |
| !!! | CCAACCTCAGCACATTTTTT+GGG | - | 15218:1831-1850 | MS.gene01344:intergenic | 40.0% |
| AAATCCTTTGCCATCCGATC+AGG | + | 15218:4001-4020 | MS.gene01344:CDS | 45.0% | |
| AACACAGGATACAATGGGAG+GGG | - | 15218:3845-3864 | MS.gene01344:intergenic | 45.0% | |
| AACCCTTCAGGCTGAGAAAT+TGG | - | 15218:2933-2952 | MS.gene01344:intergenic | 45.0% | |
| AAGAAGATCTGGCAGCAAAG+AGG | - | 15218:6561-6580 | MS.gene01344:intergenic | 45.0% | |
| AATTCTAAACGAGGGCCAGA+AGG | - | 15218:3205-3224 | MS.gene01344:intergenic | 45.0% | |
| AATTGGCTGATCCTAGTTCC+TGG | + | 15218:4754-4773 | MS.gene01344:CDS | 45.0% | |
| ACAACACAGGATACAATGGG+AGG | - | 15218:3847-3866 | MS.gene01344:intergenic | 45.0% | |
| ACAAGGTTGTGGTACAACAC+AGG | - | 15218:3860-3879 | MS.gene01344:intergenic | 45.0% | |
| ACCCAAGACAAGGATTCAAC+AGG | - | 15218:3807-3826 | MS.gene01344:intergenic | 45.0% | |
| ACTAGAGAATGCACATCTGG+AGG | - | 15218:1006-1025 | MS.gene01344:intergenic | 45.0% | |
| AGATTTATGACATGCAGGCC+AGG | - | 15218:1985-2004 | MS.gene01344:intergenic | 45.0% | |
| AGCCCAACTATGAACAAGGA+GGG | + | 15218:7179-7198 | MS.gene01344:CDS | 45.0% | |
| AGCTCCAATTCAGTACACCT+GGG | - | 15218:1589-1608 | MS.gene01344:intergenic | 45.0% | |
| AGGGAAGTGAAGCTTAGCAA+CGG | + | 15218:7449-7468 | MS.gene01344:CDS | 45.0% | |
| ATCAGGAAGATTGTCTTCCC+TGG | + | 15218:2205-2224 | MS.gene01344:intron | 45.0% | |
| ATCCTGACTGACATGAAGCA+TGG | - | 15218:6413-6432 | MS.gene01344:intergenic | 45.0% | |
| ATGAACAAGGAGGGCAATGA+TGG | + | 15218:7188-7207 | MS.gene01344:CDS | 45.0% | |
| ATGATCAGGATCCTGCTTAG+TGG | - | 15218:6796-6815 | MS.gene01344:intergenic | 45.0% | |
| ATGCTTGGGACATGATTAGG+AGG | - | 15218:4957-4976 | MS.gene01344:intergenic | 45.0% | |
| ATGTCGTGGGTGTTTAGTTG+TGG | - | 15218:6898-6917 | MS.gene01344:intergenic | 45.0% | |
| ATTACCTGATCGGATGGCAA+AGG | - | 15218:4008-4027 | MS.gene01344:intergenic | 45.0% | |
| CAACAAACTCCACCTCATCT+AGG | + | 15218:1445-1464 | MS.gene01344:CDS | 45.0% | |
| CAACACAGGATACAATGGGA+GGG | - | 15218:3846-3865 | MS.gene01344:intergenic | 45.0% | |
| CAACTCCACCTAGTGAGATA+AGG | + | 15218:2363-2382 | MS.gene01344:intron | 45.0% | |
| CACCAATTTCTCAGCCTGAA+GGG | + | 15218:2928-2947 | MS.gene01344:CDS | 45.0% | |
| CAGCAGACTTTGTTGAACTC+TGG | + | 15218:7377-7396 | MS.gene01344:CDS | 45.0% | |
| CATAGGTCATTACGTAGTGC+TGG | - | 15218:3633-3652 | MS.gene01344:intergenic | 45.0% | |
| CATCTAGGCAAGCAGTTTAG+TGG | + | 15218:1460-1479 | MS.gene01344:CDS | 45.0% | |
| CATGGAGATGGCTACATAAC+CGG | + | 15218:1245-1264 | MS.gene01344:intron | 45.0% | |
| CCCAAAAAATGTGCTGAGGT+TGG | + | 15218:1828-1847 | MS.gene01344:intron | 45.0% | |
| CCCAAGACAAGGATTCAACA+GGG | - | 15218:3806-3825 | MS.gene01344:intergenic | 45.0% | |
| CCCTGTTGAATCCTTGTCTT+GGG | + | 15218:3803-3822 | MS.gene01344:intron | 45.0% | |
| CCTAAATGCCAGCAATTAGG+CGG | - | 15218:3592-3611 | MS.gene01344:intergenic | 45.0% | |
| CCTTCAATCACCACAATGCT+TGG | - | 15218:4972-4991 | MS.gene01344:intergenic | 45.0% | |
| CTAAACTGCTTGCCTAGATG+AGG | - | 15218:1460-1479 | MS.gene01344:intergenic | 45.0% | |
| CTGAGAAATTGGTGGGAAGT+AGG | - | 15218:2922-2941 | MS.gene01344:intergenic | 45.0% | |
| CTTATCTCACTAGGTGGAGT+TGG | - | 15218:2365-2384 | MS.gene01344:intergenic | 45.0% | |
| CTTCAGGCTGAGAAATTGGT+GGG | - | 15218:2929-2948 | MS.gene01344:intergenic | 45.0% | |
| CTTCTCACGCCGTAACATAA+GGG | - | 15218:7033-7052 | MS.gene01344:intergenic | 45.0% | |
| GAAAATGAAGGCCACTAAGC+AGG | + | 15218:6782-6801 | MS.gene01344:CDS | 45.0% | |
| GAAGAAGTCAGTTGTTGCCA+CGG | + | 15218:1557-1576 | MS.gene01344:CDS | 45.0% | |
| GACAATTCTTCTTCTCGCTC+TGG | - | 15218:7287-7306 | MS.gene01344:intergenic | 45.0% | |
| GACTGACATGAAGCATGGTA+TGG | - | 15218:6408-6427 | MS.gene01344:intergenic | 45.0% | |
| GCACTACGTAATGACCTATG+TGG | + | 15218:3633-3652 | MS.gene01344:intron | 45.0% | |
| GCAGATATTACCTGATCGGA+TGG | - | 15218:4014-4033 | MS.gene01344:intergenic | 45.0% | |
| GGAATGTCAAACTGGGTTCA+AGG | + | 15218:1127-1146 | MS.gene01344:CDS | 45.0% | |
| GGATATTTCAGTTCCGCTTC+TGG | + | 15218:2988-3007 | MS.gene01344:CDS | 45.0% | |
| GGATTGCTCTGTGGATTTGT+GGG | + | 15218:2774-2793 | MS.gene01344:intron | 45.0% | |
| GTGCACTTCTTCCAGCAAAA+TGG | + | 15218:6242-6261 | MS.gene01344:CDS | 45.0% | |
| GTGCATGTCTGCTTATGCTT+GGG | - | 15218:6972-6991 | MS.gene01344:intergenic | 45.0% | |
| GTTGTACCACAACCTTGTTG+TGG | + | 15218:3862-3881 | MS.gene01344:intron | 45.0% | |
| TACCATGCTTCATGTCAGTC+AGG | + | 15218:6408-6427 | MS.gene01344:intron | 45.0% | |
| TAGCCCAACTATGAACAAGG+AGG | + | 15218:7178-7197 | MS.gene01344:CDS | 45.0% | |
| TAGCTCCAATTCAGTACACC+TGG | - | 15218:1590-1609 | MS.gene01344:intergenic | 45.0% | |
| TCATCCGTGTCTCCGTTTAA+AGG | + | 15218:7239-7258 | MS.gene01344:CDS | 45.0% | |
| TCCAAAGCTTCAGCATGATC+AGG | - | 15218:6810-6829 | MS.gene01344:intergenic | 45.0% | |
| TCCCTGTTGAATCCTTGTCT+TGG | + | 15218:3802-3821 | MS.gene01344:intron | 45.0% | |
| TCCTGATCATGCTGAAGCTT+TGG | + | 15218:6806-6825 | MS.gene01344:CDS | 45.0% | |
| TCTTCTCACGCCGTAACATA+AGG | - | 15218:7034-7053 | MS.gene01344:intergenic | 45.0% | |
| TGCAAATCTAGCAATCCTGG+GGG | + | 15218:6845-6864 | MS.gene01344:CDS | 45.0% | |
| TGCAGCTGAACAAGAAGATC+TGG | - | 15218:6572-6591 | MS.gene01344:intergenic | 45.0% | |
| TGCATGTCTGCTTATGCTTG+GGG | - | 15218:6971-6990 | MS.gene01344:intergenic | 45.0% | |
| TGCCCTCCTTGTTCATAGTT+GGG | - | 15218:7184-7203 | MS.gene01344:intergenic | 45.0% | |
| TGCCTGATAACACTAGGTGT+TGG | + | 15218:3535-3554 | MS.gene01344:intron | 45.0% | |
| TGCTTGGGACATGATTAGGA+GGG | - | 15218:4956-4975 | MS.gene01344:intergenic | 45.0% | |
| TGGAATTTCCGCCTTCATTG+CGG | + | 15218:3555-3574 | MS.gene01344:intron | 45.0% | |
| TGGATTGCTCTGTGGATTTG+TGG | + | 15218:2773-2792 | MS.gene01344:intron | 45.0% | |
| TGGCATCTCCCTACATACTT+TGG | + | 15218:3432-3451 | MS.gene01344:intron | 45.0% | |
| TGTGCATGTCTGCTTATGCT+TGG | - | 15218:6973-6992 | MS.gene01344:intergenic | 45.0% | |
| TTCACAGACAGGCTACAAGA+TGG | - | 15218:5463-5482 | MS.gene01344:intergenic | 45.0% | |
| TTCAGATGAAGGCAGTTGCT+GGG | - | 15218:7111-7130 | MS.gene01344:intergenic | 45.0% | |
| TTCTACTCTCTGTTGCTCCA+GGG | - | 15218:2225-2244 | MS.gene01344:intergenic | 45.0% | |
| TTGCCCTCCTTGTTCATAGT+TGG | - | 15218:7185-7204 | MS.gene01344:intergenic | 45.0% | |
| TTTCAGATGAAGGCAGTTGC+TGG | - | 15218:7112-7131 | MS.gene01344:intergenic | 45.0% | |
| TTTCTACTCTCTGTTGCTCC+AGG | - | 15218:2226-2245 | MS.gene01344:intergenic | 45.0% | |
| ! | AACTGCATGGACTGTATGCA+CGG | - | 15218:3056-3075 | MS.gene01344:intergenic | 45.0% |
| ! | ACGGATGATTTTATCCGGTG+AGG | - | 15218:7227-7246 | MS.gene01344:intergenic | 45.0% |
| ! | ATGCTGTTTGGATTCAGCTC+AGG | + | 15218:4340-4359 | MS.gene01344:intron | 45.0% |
| ! | ATTGTGTTGTTGCTCTCACC+TGG | + | 15218:5879-5898 | MS.gene01344:intron | 45.0% |
| ! | CAACAACTGACTTCTTCCTC+GGG | - | 15218:1554-1573 | MS.gene01344:intergenic | 45.0% |
| ! | CCAAGCATTGTGGTGATTGA+AGG | + | 15218:4969-4988 | MS.gene01344:CDS | 45.0% |
| ! | GCAACAACTGACTTCTTCCT+CGG | - | 15218:1555-1574 | MS.gene01344:intergenic | 45.0% |
| ! | GTTCTGATGATGATCCTCAC+CGG | + | 15218:7210-7229 | MS.gene01344:CDS | 45.0% |
| ! | TCTGGTACTGGAGATTCATC+AGG | + | 15218:7395-7414 | MS.gene01344:CDS | 45.0% |
| ! | TGATCATGCTGAAGCTTTGG+AGG | + | 15218:6809-6828 | MS.gene01344:CDS | 45.0% |
| ! | TGGCCCTCGTTTAGAATTGT+AGG | + | 15218:3207-3226 | MS.gene01344:intron | 45.0% |
| ! | TGTCTGCCTTTTGTAATGCC+TGG | + | 15218:1964-1983 | MS.gene01344:intron | 45.0% |
| ! | TGTTGTTATTCGGCCAGAAG+CGG | - | 15218:3004-3023 | MS.gene01344:intergenic | 45.0% |
| ! | TTGGCCTTTAAACGGAGACA+CGG | - | 15218:7246-7265 | MS.gene01344:intergenic | 45.0% |
| !! | AGATGAGGTGGAGTTTGTTG+TGG | - | 15218:1445-1464 | MS.gene01344:intergenic | 45.0% |
| !! | CACAGATATGCTTCTAGAGC+AGG | - | 15218:3306-3325 | MS.gene01344:intergenic | 45.0% |
| !! | GATCATGCTGAAGCTTTGGA+GGG | + | 15218:6810-6829 | MS.gene01344:CDS | 45.0% |
| !!! | TATTAATTTGAAAATATTTT+TGG | + | 15218:1873-1892 | MS.gene01344:intron | 5.0% |
| !!! | TTTTTTGTATTATTTTTATA+TGG | + | 15218:5759-5778 | MS.gene01344:intron | 5.0% |
| AAACACCCACGACATAGACC+CGG | + | 15218:6903-6922 | MS.gene01344:CDS | 50.0% | |
| AACTGCTTGCCTAGATGAGG+TGG | - | 15218:1457-1476 | MS.gene01344:intergenic | 50.0% | |
| AATCTAGCAATCCTGGGGGA+AGG | + | 15218:6849-6868 | MS.gene01344:CDS | 50.0% | |
| ACACCACCAGAATCTGAACC+AGG | - | 15218:7311-7330 | MS.gene01344:intergenic | 50.0% | |
| ACTAGGTGGAGTTGGCTACA+TGG | - | 15218:2357-2376 | MS.gene01344:intergenic | 50.0% | |
| ACTTTGAGTGCCAGTGATGC+TGG | + | 15218:1783-1802 | MS.gene01344:CDS | 50.0% | |
| AGCAGGTAGGAGATGTTGTG+AGG | + | 15218:7429-7448 | MS.gene01344:CDS | 50.0% | |
| AGGTGACACAGGTAAGCCAA+TGG | + | 15218:3082-3101 | MS.gene01344:intron | 50.0% | |
| ATAGATGGCTTCCCAAGCAC+CGG | - | 15218:5649-5668 | MS.gene01344:intergenic | 50.0% | |
| ATATGCACGGACCTTCCTTC+TGG | + | 15218:3187-3206 | MS.gene01344:intron | 50.0% | |
| ATCAGGTAGTCAGTCACAGC+AGG | + | 15218:7412-7431 | MS.gene01344:CDS | 50.0% | |
| ATCTAGCAATCCTGGGGGAA+GGG | + | 15218:6850-6869 | MS.gene01344:CDS | 50.0% | |
| ATGCCAGCAATTAGGCGGTT+AGG | - | 15218:3587-3606 | MS.gene01344:intergenic | 50.0% | |
| ATTCTTCTTCTCGCTCTGGC+TGG | - | 15218:7283-7302 | MS.gene01344:intergenic | 50.0% | |
| CAAACAATGCAAGAGCAGCC+GGG | - | 15218:6924-6943 | MS.gene01344:intergenic | 50.0% | |
| CAACGAACAGGCCCTTTGTA+AGG | + | 15218:3366-3385 | MS.gene01344:intron | 50.0% | |
| CACGCCGTAACATAAGGGTA+CGG | - | 15218:7028-7047 | MS.gene01344:intergenic | 50.0% | |
| CAGGTAAGCCAATGGCATGA+AGG | + | 15218:3090-3109 | MS.gene01344:intron | 50.0% | |
| CCAACGGCCTCATACTCTAA+AGG | + | 15218:1330-1349 | MS.gene01344:CDS | 50.0% | |
| CCACCAATTTCTCAGCCTGA+AGG | + | 15218:2927-2946 | MS.gene01344:CDS | 50.0% | |
| CCACCTAGTGAGATAAGGCT+TGG | + | 15218:2368-2387 | MS.gene01344:intron | 50.0% | |
| CCGCCTAATTGCTGGCATTT+AGG | + | 15218:3589-3608 | MS.gene01344:intron | 50.0% | |
| CCTAGTGAGATAAGGCTTGG+TGG | + | 15218:2371-2390 | MS.gene01344:intron | 50.0% | |
| CCTTCAGGCTGAGAAATTGG+TGG | - | 15218:2930-2949 | MS.gene01344:intergenic | 50.0% | |
| CGAGAAGAAGAATTGTCGCC+TGG | + | 15218:7290-7309 | MS.gene01344:CDS | 50.0% | |
| CGCAGTAACATTTAGCCGGT+TGG | + | 15218:3938-3957 | MS.gene01344:intron | 50.0% | |
| CTTGGGACATGATTAGGAGG+GGG | - | 15218:4954-4973 | MS.gene01344:intergenic | 50.0% | |
| CTTTGAGTGCCAGTGATGCT+GGG | + | 15218:1784-1803 | MS.gene01344:CDS | 50.0% | |
| GCAAACAATGCAAGAGCAGC+CGG | - | 15218:6925-6944 | MS.gene01344:intergenic | 50.0% | |
| GCAGGTAGGAGATGTTGTGA+GGG | + | 15218:7430-7449 | MS.gene01344:CDS | 50.0% | |
| GCGAGGACGAAGGATTGTTT+GGG | - | 15218:5441-5460 | MS.gene01344:intergenic | 50.0% | |
| GCTTCACCTGATGAGTCAAG+AGG | - | 15218:1499-1518 | MS.gene01344:intergenic | 50.0% | |
| GCTTGGGACATGATTAGGAG+GGG | - | 15218:4955-4974 | MS.gene01344:intergenic | 50.0% | |
| GGATCACTCTCGTACCTTTC+TGG | - | 15218:6292-6311 | MS.gene01344:intergenic | 50.0% | |
| GTCAGTTGTTGCCACGGTAT+TGG | + | 15218:1563-1582 | MS.gene01344:CDS | 50.0% | |
| GTGAAGCTCAGGTTCGCAAT+GGG | + | 15218:1512-1531 | MS.gene01344:CDS | 50.0% | |
| TAGTTGTGGCCTGGGAAGAT+GGG | - | 15218:6884-6903 | MS.gene01344:intergenic | 50.0% | |
| TGACTCATCAGGTGAAGCTC+AGG | + | 15218:1501-1520 | MS.gene01344:CDS | 50.0% | |
| TGCAGGCCAGGCATTACAAA+AGG | - | 15218:1973-1992 | MS.gene01344:intergenic | 50.0% | |
| TGCCAGCAATTAGGCGGTTA+GGG | - | 15218:3586-3605 | MS.gene01344:intergenic | 50.0% | |
| TGGAGTCAGTTAGCTGGATC+AGG | + | 15218:922-941 | MS.gene01344:CDS | 50.0% | |
| TGGGAAGTAGGTCTGTCTCA+TGG | - | 15218:2910-2929 | MS.gene01344:intergenic | 50.0% | |
| TGGGTGTTTAGTTGTGGCCT+GGG | - | 15218:6892-6911 | MS.gene01344:intergenic | 50.0% | |
| TTAGTTGTGGCCTGGGAAGA+TGG | - | 15218:6885-6904 | MS.gene01344:intergenic | 50.0% | |
| TTGGCCCAGGTGTACTGAAT+TGG | + | 15218:1582-1601 | MS.gene01344:CDS | 50.0% | |
| TTGTCGCCTGGTTCAGATTC+TGG | + | 15218:7302-7321 | MS.gene01344:CDS | 50.0% | |
| ! | AGGTCATTACGTAGTGCTGG+AGG | - | 15218:3630-3649 | MS.gene01344:intergenic | 50.0% |
| ! | CCAAGCCTTATCTCACTAGG+TGG | - | 15218:2371-2390 | MS.gene01344:intergenic | 50.0% |
| ! | CCACCAAGCCTTATCTCACT+AGG | - | 15218:2374-2393 | MS.gene01344:intergenic | 50.0% |
| ! | CCTGAAGGGAGGTTGGTTAT+GGG | + | 15218:3963-3982 | MS.gene01344:CDS | 50.0% |
| !! | CCTTTAGAGTATGAGGCCGT+TGG | - | 15218:1333-1352 | MS.gene01344:intergenic | 50.0% |
| AAGGTTGCCCCCCTCATCAT+TGG | + | 15218:1065-1084 | MS.gene01344:CDS | 55.0% | |
| ACATCTCAGCAGCAGCATCG+TGG | - | 15218:7346-7365 | MS.gene01344:intergenic | 55.0% | |
| AGACAGGCTACAAGATGGCG+AGG | - | 15218:5458-5477 | MS.gene01344:intergenic | 55.0% | |
| AGACTGGGTGCTTGCTTCCA+GGG | - | 15218:955-974 | MS.gene01344:intergenic | 55.0% | |
| ATCCAGCCGCCTAGTGGAAA+GGG | + | 15218:6945-6964 | MS.gene01344:CDS | 55.0% | |
| ATGCACATCTGGAGGCTGGT+CGG | - | 15218:998-1017 | MS.gene01344:intergenic | 55.0% | |
| CAGTCCATGCAGTTGCAAGC+AGG | + | 15218:3062-3081 | MS.gene01344:CDS | 55.0% | |
| CAGTTGCAAGCAGGTGACAC+AGG | + | 15218:3071-3090 | MS.gene01344:CDS | 55.0% | |
| CCAGTGATGCTGGGCGAATT+GGG | + | 15218:1793-1812 | MS.gene01344:CDS | 55.0% | |
| CCCATAACCAACCTCCCTTC+AGG | - | 15218:3966-3985 | MS.gene01344:intergenic | 55.0% | |
| CTAAACGAGGGCCAGAAGGA+AGG | - | 15218:3201-3220 | MS.gene01344:intergenic | 55.0% | |
| CTACAAGATGGCGAGGACGA+AGG | - | 15218:5451-5470 | MS.gene01344:intergenic | 55.0% | |
| GAGAATGCACATCTGGAGGC+TGG | - | 15218:1002-1021 | MS.gene01344:intergenic | 55.0% | |
| GCCAGCAATTAGGCGGTTAG+GGG | - | 15218:3585-3604 | MS.gene01344:intergenic | 55.0% | |
| GGCGAGGACGAAGGATTGTT+TGG | - | 15218:5442-5461 | MS.gene01344:intergenic | 55.0% | |
| GGTAGTCAGTCACAGCAGGT+AGG | + | 15218:7416-7435 | MS.gene01344:CDS | 55.0% | |
| GGTGAAGCTCAGGTTCGCAA+TGG | + | 15218:1511-1530 | MS.gene01344:CDS | 55.0% | |
| GTCACCTGCTTGCAACTGCA+TGG | - | 15218:3069-3088 | MS.gene01344:intergenic | 55.0% | |
| GTGGGTGTTTAGTTGTGGCC+TGG | - | 15218:6893-6912 | MS.gene01344:intergenic | 55.0% | |
| TACAGGATGCTCCGGTGCTT+GGG | + | 15218:5635-5654 | MS.gene01344:intron | 55.0% | |
| TCGCCTGGTTCAGATTCTGG+TGG | + | 15218:7305-7324 | MS.gene01344:CDS | 55.0% | |
| TCTAGCAATCCTGGGGGAAG+GGG | + | 15218:6851-6870 | MS.gene01344:CDS | 55.0% | |
| TTACAGGATGCTCCGGTGCT+TGG | + | 15218:5634-5653 | MS.gene01344:intron | 55.0% | |
| TTAGCCGGTTGGAGCCTGAA+GGG | + | 15218:3949-3968 | MS.gene01344:CDS | 55.0% | |
| TTAGGGGCTGACCGCAATGA+AGG | - | 15218:3569-3588 | MS.gene01344:intergenic | 55.0% | |
| TTTAGCCGGTTGGAGCCTGA+AGG | + | 15218:3948-3967 | MS.gene01344:CDS | 55.0% | |
| ! | AGTGCTGGAGGCTGCAATGA+TGG | - | 15218:3618-3637 | MS.gene01344:intergenic | 55.0% |
| ! | GCCTGAAGGGAGGTTGGTTA+TGG | + | 15218:3962-3981 | MS.gene01344:CDS | 55.0% |
| ! | GCTGGAAGAAGTGCACATGC+TGG | - | 15218:6238-6257 | MS.gene01344:intergenic | 55.0% |
| ACCTCCCTTCAGGCTCCAAC+CGG | - | 15218:3956-3975 | MS.gene01344:intergenic | 60.0% | |
| AGCAGCCGGGTCTATGTCGT+GGG | - | 15218:6911-6930 | MS.gene01344:intergenic | 60.0% | |
| CAGACTGGGTGCTTGCTTCC+AGG | - | 15218:956-975 | MS.gene01344:intergenic | 60.0% | |
| CATCCAGCCGCCTAGTGGAA+AGG | + | 15218:6944-6963 | MS.gene01344:CDS | 60.0% | |
| CCCAATTCGCCCAGCATCAC+TGG | - | 15218:1796-1815 | MS.gene01344:intergenic | 60.0% | |
| CTGGATCAGGACCTGTACCC+TGG | + | 15218:935-954 | MS.gene01344:CDS | 60.0% | |
| GATTAGGAGGGGGACGAAGC+AGG | - | 15218:4944-4963 | MS.gene01344:intergenic | 60.0% | |
| GCCAGTGATGCTGGGCGAAT+TGG | + | 15218:1792-1811 | MS.gene01344:CDS | 60.0% | |
| GCCCCTAACCGCCTAATTGC+TGG | + | 15218:3581-3600 | MS.gene01344:intron | 60.0% | |
| GGTGCTTGCTTCCAGGGTAC+AGG | - | 15218:949-968 | MS.gene01344:intergenic | 60.0% | |
| GTACACCTGGGCCAATACCG+TGG | - | 15218:1577-1596 | MS.gene01344:intergenic | 60.0% | |
| GTTGGAGCCTGAAGGGAGGT+TGG | + | 15218:3956-3975 | MS.gene01344:CDS | 60.0% | |
| GTTTGCATCCAGCCGCCTAG+TGG | + | 15218:6939-6958 | MS.gene01344:CDS | 60.0% | |
| TGCTTGGGGCCCTTTCCACT+AGG | - | 15218:6957-6976 | MS.gene01344:intergenic | 60.0% | |
| TTGGGGCCCTTTCCACTAGG+CGG | - | 15218:6954-6973 | MS.gene01344:intergenic | 60.0% | |
| !! | TGTTGCCACGGTATTGGCCC+AGG | + | 15218:1569-1588 | MS.gene01344:CDS | 60.0% |
| AGCAATCCTGGGGGAAGGGG+AGG | + | 15218:6854-6873 | MS.gene01344:CDS | 65.0% | |
| CTTCCTCGGGCATCTGCTCG+AGG | - | 15218:1541-1560 | MS.gene01344:intergenic | 65.0% | |
| GAGCAGCCGGGTCTATGTCG+TGG | - | 15218:6912-6931 | MS.gene01344:intergenic | 65.0% | |
| GGAGGCTCTCCCATCTTCCC+AGG | + | 15218:6872-6891 | MS.gene01344:CDS | 65.0% | |
| GGGGCTGACCGCAATGAAGG+CGG | - | 15218:3566-3585 | MS.gene01344:intergenic | 65.0% | |
| TGCTGGGCGAATTGGGCGCT+TGG | + | 15218:1800-1819 | MS.gene01344:CDS | 65.0% | |
| CGACCTCGAGCAGATGCCCG+AGG | + | 15218:1535-1554 | MS.gene01344:CDS | 70.0% | |
| GCCGGTTGGAGCCTGAAGGG+AGG | + | 15218:3952-3971 | MS.gene01344:CDS | 70.0% | |
| GGCCCTTTCCACTAGGCGGC+TGG | - | 15218:6950-6969 | MS.gene01344:intergenic | 70.0% | |
| GGAGAGCCTCCCCTTCCCCC+AGG | - | 15218:6863-6882 | MS.gene01344:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 15218 | gene | 907 | 7541 | 907 | ID=MS.gene01344 |
| 15218 | mRNA | 907 | 7541 | 907 | ID=MS.gene01344.t1;Parent=MS.gene01344 |
| 15218 | exon | 907 | 1177 | 907 | ID=MS.gene01344.t1.exon1;Parent=MS.gene01344.t1 |
| 15218 | CDS | 907 | 1177 | 907 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 1287 | 1626 | 1287 | ID=MS.gene01344.t1.exon2;Parent=MS.gene01344.t1 |
| 15218 | CDS | 1287 | 1626 | 1287 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 1749 | 1845 | 1749 | ID=MS.gene01344.t1.exon3;Parent=MS.gene01344.t1 |
| 15218 | CDS | 1749 | 1845 | 1749 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 2918 | 3092 | 2918 | ID=MS.gene01344.t1.exon4;Parent=MS.gene01344.t1 |
| 15218 | CDS | 2918 | 3092 | 2918 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 3943 | 4022 | 3943 | ID=MS.gene01344.t1.exon5;Parent=MS.gene01344.t1 |
| 15218 | CDS | 3943 | 4022 | 3943 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 4619 | 4663 | 4619 | ID=MS.gene01344.t1.exon6;Parent=MS.gene01344.t1 |
| 15218 | CDS | 4619 | 4663 | 4619 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 4750 | 5013 | 4750 | ID=MS.gene01344.t1.exon7;Parent=MS.gene01344.t1 |
| 15218 | CDS | 4750 | 5013 | 4750 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 5640 | 5689 | 5640 | ID=MS.gene01344.t1.exon8;Parent=MS.gene01344.t1 |
| 15218 | CDS | 5640 | 5689 | 5640 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 6183 | 6296 | 6183 | ID=MS.gene01344.t1.exon9;Parent=MS.gene01344.t1 |
| 15218 | CDS | 6183 | 6296 | 6183 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 6573 | 6642 | 6573 | ID=MS.gene01344.t1.exon10;Parent=MS.gene01344.t1 |
| 15218 | CDS | 6573 | 6642 | 6573 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| 15218 | exon | 6735 | 7541 | 6735 | ID=MS.gene01344.t1.exon11;Parent=MS.gene01344.t1 |
| 15218 | CDS | 6735 | 7541 | 6735 | ID=cds.MS.gene01344.t1;Parent=MS.gene01344.t1 |
| Gene Sequence |
| Protein sequence |
