AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013480.t1 MTR_3g093050 98.485 594 8 1 1 594 1 593 0.0 1226
MS.gene013480.t1 MTR_3g093050 94.194 620 10 1 1 594 1 620 0.0 1214
MS.gene013480.t1 MTR_5g069030 47.833 646 241 14 1 576 1 620 0.0 545
MS.gene013480.t1 MTR_3g093040 84.018 219 28 1 14 232 100 311 1.59e-133 392
MS.gene013480.t1 MTR_6g477900 48.636 220 106 3 17 232 1 217 7.53e-61 202
MS.gene013480.t1 MTR_3g064580 62.092 153 57 1 21 172 5 157 1.21e-58 208
MS.gene013480.t1 MTR_2g064090 49.029 206 78 4 21 220 5 189 1.84e-56 194
MS.gene013480.t1 MTR_5g076850 60.526 152 60 0 21 172 5 156 2.82e-56 201
MS.gene013480.t1 MTR_3g070030 43.529 255 130 7 22 267 19 268 3.99e-54 188
MS.gene013480.t1 MTR_5g014300 55.828 163 62 3 21 176 5 164 2.24e-53 185
MS.gene013480.t1 MTR_2g086880 50.562 178 74 4 4 176 1 169 8.02e-52 186
MS.gene013480.t1 MTR_2g086880 50.562 178 74 4 4 176 1 169 1.57e-51 187
MS.gene013480.t1 MTR_1g097300 52.601 173 79 2 1 173 1 170 3.21e-50 183
MS.gene013480.t1 MTR_4g098630 54.268 164 70 3 21 180 5 167 3.62e-50 176
MS.gene013480.t1 MTR_8g023860 54.487 156 62 4 18 170 8 157 4.56e-50 179
MS.gene013480.t1 MTR_8g063550 50.641 156 77 0 17 172 1 156 5.79e-50 176
MS.gene013480.t1 MTR_8g063550 50.641 156 77 0 17 172 1 156 2.02e-49 177
MS.gene013480.t1 MTR_8g063550 50.641 156 77 0 17 172 1 156 2.11e-49 177
MS.gene013480.t1 MTR_3g096140 42.654 211 97 3 25 220 10 211 3.25e-49 172
MS.gene013480.t1 MTR_8g023840 56.954 151 56 5 22 169 11 155 5.15e-49 176
MS.gene013480.t1 MTR_0036s0150 53.797 158 70 3 17 173 1 156 8.30e-49 178
MS.gene013480.t1 MTR_1g090723 54.362 149 67 1 25 172 11 159 1.06e-48 179
MS.gene013480.t1 MTR_3g435150 43.721 215 99 4 22 221 16 223 1.08e-48 172
MS.gene013480.t1 MTR_5g012080 50.000 156 75 3 19 172 4 158 1.08e-48 173
MS.gene013480.t1 MTR_4g036030 51.282 156 73 3 18 172 3 156 1.24e-48 173
MS.gene013480.t1 MTR_1g090723 54.667 150 66 2 25 173 11 159 1.55e-48 178
MS.gene013480.t1 MTR_4g108760 54.902 153 65 2 22 172 17 167 1.59e-48 173
MS.gene013480.t1 MTR_1g090723 55.034 149 65 2 25 172 11 158 2.71e-48 178
MS.gene013480.t1 MTR_1g090720 54.375 160 67 1 21 174 41 200 2.95e-48 176
MS.gene013480.t1 MTR_3g096140 42.654 211 97 3 25 220 10 211 4.01e-48 172
MS.gene013480.t1 MTR_4g101680 46.061 165 86 2 18 181 3 165 1.42e-47 171
MS.gene013480.t1 MTR_8g076110 49.673 153 74 2 22 173 6 156 1.82e-47 169
MS.gene013480.t1 MTR_6g012670 52.727 165 67 3 22 184 20 175 2.56e-47 169
MS.gene013480.t1 MTR_7g011130 42.795 229 96 7 25 232 22 236 1.21e-46 167
MS.gene013480.t1 MTR_6g084430 52.318 151 68 2 22 172 5 151 1.66e-46 166
MS.gene013480.t1 MTR_4g035590 50.641 156 71 3 21 174 7 158 2.46e-46 167
MS.gene013480.t1 MTR_8g093580 47.436 156 82 0 17 172 1 156 4.70e-46 169
MS.gene013480.t1 MTR_5g021710 50.658 152 72 2 22 172 8 157 4.88e-46 166
MS.gene013480.t1 MTR_7g011120 48.810 168 68 3 25 183 11 169 6.83e-46 164
MS.gene013480.t1 MTR_3g109340 55.195 154 64 3 21 172 21 171 2.36e-45 164
MS.gene013480.t1 MTR_2g062730 49.359 156 75 3 21 174 9 162 2.48e-45 164
MS.gene013480.t1 MTR_8g467490 47.273 165 74 4 25 178 17 179 3.66e-45 165
MS.gene013480.t1 MTR_2g079990 48.750 160 80 1 17 176 11 168 6.48e-45 163
MS.gene013480.t1 MTR_4g081870 50.955 157 67 3 22 172 9 161 7.41e-45 160
MS.gene013480.t1 MTR_3g109340 54.545 154 64 3 21 172 21 170 7.54e-45 163
MS.gene013480.t1 MTR_6g032770 47.977 173 76 4 22 190 18 180 1.15e-44 163
MS.gene013480.t1 MTR_1g096430 50.658 152 72 2 22 172 7 156 2.46e-44 161
MS.gene013480.t1 MTR_1g008740 53.548 155 66 4 21 172 12 163 3.38e-44 161
MS.gene013480.t1 MTR_1g008740 53.548 155 66 4 21 172 26 177 3.68e-44 161
MS.gene013480.t1 MTR_8g094580 37.410 278 134 10 22 265 7 278 6.97e-44 158
MS.gene013480.t1 MTR_3g096920 45.902 183 78 6 22 197 7 175 7.57e-44 158
MS.gene013480.t1 MTR_5g040420 45.732 164 77 4 25 178 17 178 8.11e-44 161
MS.gene013480.t1 MTR_2g078700 50.617 162 64 4 22 174 23 177 8.13e-44 160
MS.gene013480.t1 MTR_5g041940 50.000 162 65 3 22 174 3 157 1.27e-43 157
MS.gene013480.t1 MTR_3g070040 38.321 274 148 8 26 286 12 277 1.82e-43 159
MS.gene013480.t1 MTR_3g088110 50.641 156 67 4 22 172 7 157 2.13e-43 157
MS.gene013480.t1 MTR_8g023930 43.386 189 88 6 22 201 24 202 2.50e-43 162
MS.gene013480.t1 MTR_8g059170 50.920 163 74 3 17 176 9 168 2.56e-43 158
MS.gene013480.t1 MTR_7g085260 50.920 163 62 4 22 173 17 172 3.89e-43 159
MS.gene013480.t1 MTR_7g085220 47.283 184 77 5 22 187 8 189 5.47e-43 157
MS.gene013480.t1 MTR_4g134460 49.664 149 70 3 25 172 57 201 9.84e-43 159
MS.gene013480.t1 MTR_2g080010 45.181 166 76 3 22 174 15 178 1.90e-42 156
MS.gene013480.t1 MTR_2g064470 48.750 160 67 4 22 175 11 161 3.17e-42 154
MS.gene013480.t1 MTR_6g011860 35.496 262 142 7 14 264 7 252 3.24e-42 157
MS.gene013480.t1 MTR_3g096140 40.909 198 93 3 38 220 2 190 1.92e-41 153
MS.gene013480.t1 MTR_8g024480 44.970 169 83 2 14 172 7 175 2.12e-41 155
MS.gene013480.t1 MTR_8g023900 50.314 159 72 4 17 172 7 161 3.09e-41 155
MS.gene013480.t1 MTR_8g023900 43.243 185 90 6 24 201 195 371 6.64e-39 149
MS.gene013480.t1 MTR_3g116070 41.827 208 99 7 22 224 23 213 5.07e-41 152
MS.gene013480.t1 MTR_7g005280 50.000 154 66 4 22 172 15 160 5.66e-41 149
MS.gene013480.t1 MTR_3g096920 55.118 127 54 2 22 148 7 130 5.77e-41 151
MS.gene013480.t1 MTR_2g079990 53.788 132 59 1 17 148 11 140 7.65e-41 152
MS.gene013480.t1 MTR_2157s0010 46.386 166 71 5 22 173 8 169 2.03e-40 148
MS.gene013480.t1 MTR_4g089135 44.444 180 73 4 22 176 15 192 5.83e-40 149
MS.gene013480.t1 MTR_7g100990 43.229 192 97 5 22 203 11 200 9.10e-40 148
MS.gene013480.t1 MTR_2g093810 45.251 179 85 6 21 192 13 185 5.37e-39 146
MS.gene013480.t1 MTR_1g069805 47.403 154 73 3 21 172 9 156 6.71e-39 144
MS.gene013480.t1 MTR_7g097090 46.711 152 73 3 21 170 9 154 6.97e-37 139
MS.gene013480.t1 MTR_8g099750 43.195 169 81 4 19 178 11 173 1.75e-36 136
MS.gene013480.t1 MTR_4g075980 45.806 155 73 4 21 172 15 161 2.68e-36 138
MS.gene013480.t1 MTR_5g090970 46.626 163 72 6 22 172 19 178 4.86e-36 137
MS.gene013480.t1 MTR_2g068880 40.984 183 87 6 9 173 8 187 7.11e-36 137
MS.gene013480.t1 MTR_2g068920 40.556 180 86 6 12 173 10 186 2.79e-35 135
MS.gene013480.t1 MTR_5g090970 45.399 163 73 6 22 172 19 177 6.37e-35 134
MS.gene013480.t1 MTR_3g098810 42.353 170 84 3 19 178 11 176 1.37e-34 131
MS.gene013480.t1 MTR_8g023880 47.953 171 58 8 21 172 6 164 2.24e-34 131
MS.gene013480.t1 MTR_3g098810 45.522 134 65 2 19 148 11 140 9.39e-32 121
MS.gene013480.t1 MTR_4g052620 40.764 157 84 5 22 170 5 160 6.09e-30 119
MS.gene013480.t1 MTR_2g086690 40.385 156 85 5 23 170 5 160 1.79e-29 117
MS.gene013480.t1 MTR_7g105170 37.349 166 92 6 19 173 1 165 8.86e-29 115
MS.gene013480.t1 MTR_8g094580 36.199 221 103 9 79 265 8 224 2.30e-28 113
MS.gene013480.t1 MTR_7g070140 51.351 74 34 1 77 148 17 90 1.05e-19 85.9
MS.gene013480.t1 MTR_4g094302 35.659 129 71 3 22 148 11 129 6.74e-19 84.3
MS.gene013480.t1 MTR_4g094302 35.659 129 71 3 22 148 11 129 1.34e-18 84.7
MS.gene013480.t1 MTR_7g083330 34.058 138 81 4 11 147 13 141 1.17e-15 76.3
MS.gene013480.t1 MTR_3g096400 33.333 165 84 7 22 171 7 160 9.60e-14 70.9
MS.gene013480.t1 MTR_7g070150 46.774 62 30 1 120 181 8 66 3.87e-13 65.9
MS.gene013480.t1 MTR_7g083360 32.283 127 82 3 22 147 10 133 4.40e-12 64.7
MS.gene013480.t1 MTR_2g014680 29.814 161 92 6 10 153 41 197 3.39e-11 65.1
MS.gene013480.t1 MTR_4g078875 28.395 162 88 6 7 147 33 187 4.52e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013480.t1 AT4G35580 39.417 515 242 16 14 524 1 449 1.65e-93 296
MS.gene013480.t1 AT4G35580 39.189 518 239 16 14 524 1 449 3.67e-93 296
MS.gene013480.t1 AT4G35580 39.189 518 239 16 14 524 1 449 4.51e-93 296
MS.gene013480.t1 AT1G33060 65.000 200 69 1 7 205 9 208 7.35e-89 288
MS.gene013480.t1 AT1G33060 65.000 200 69 1 7 205 9 208 8.16e-89 288
MS.gene013480.t1 AT3G49530 48.750 320 137 9 14 326 5 304 8.70e-86 273
MS.gene013480.t1 AT3G49530 48.750 320 137 9 14 326 5 304 1.21e-85 275
MS.gene013480.t1 AT5G24590 55.274 237 89 4 10 230 1 236 4.90e-84 270
MS.gene013480.t1 AT3G17730 60.131 153 61 0 21 173 5 157 6.51e-61 202
MS.gene013480.t1 AT1G65910 47.083 240 112 4 21 249 5 240 4.12e-59 208
MS.gene013480.t1 AT5G17260 61.438 153 58 1 21 172 5 157 8.24e-57 199
MS.gene013480.t1 AT3G03200 61.438 153 58 1 21 172 5 157 7.84e-56 196
MS.gene013480.t1 AT4G17980 42.169 249 118 6 20 244 4 250 1.15e-54 186
MS.gene013480.t1 AT3G10490 56.774 155 66 1 21 174 26 180 2.00e-54 185
MS.gene013480.t1 AT4G17980 42.510 247 116 6 22 244 6 250 2.05e-54 187
MS.gene013480.t1 AT3G10480 53.892 167 77 0 8 174 13 179 2.61e-54 191
MS.gene013480.t1 AT3G10480 54.706 170 72 2 8 174 13 180 3.59e-54 191
MS.gene013480.t1 AT3G10490 56.774 155 66 1 21 174 26 180 4.14e-53 188
MS.gene013480.t1 AT5G46590 56.688 157 62 3 22 174 6 160 1.05e-52 182
MS.gene013480.t1 AT3G10500 54.375 160 73 0 14 173 1 160 1.54e-52 189
MS.gene013480.t1 AT1G54330 57.516 153 62 1 21 173 5 154 1.39e-51 179
MS.gene013480.t1 AT5G04410 52.500 160 76 0 14 173 1 160 3.01e-51 186
MS.gene013480.t1 AT5G07680 47.525 202 87 5 22 211 3 197 1.85e-50 177
MS.gene013480.t1 AT5G07680 47.525 202 87 5 22 211 17 211 2.29e-50 177
MS.gene013480.t1 AT5G46590 61.719 128 48 1 22 148 6 133 5.67e-50 174
MS.gene013480.t1 AT5G61430 42.982 228 115 5 22 245 16 232 8.87e-50 176
MS.gene013480.t1 AT5G39610 54.375 160 69 2 22 179 20 177 2.25e-49 173
MS.gene013480.t1 AT1G12260 51.282 156 73 3 18 172 3 156 8.47e-49 173
MS.gene013480.t1 AT1G62700 51.282 156 73 3 18 172 3 156 1.01e-48 174
MS.gene013480.t1 AT1G62700 51.282 156 73 3 18 172 3 156 1.01e-48 174
MS.gene013480.t1 AT1G12260 51.282 156 73 3 18 172 3 156 1.88e-48 174
MS.gene013480.t1 AT5G62380 48.485 165 82 2 18 181 3 165 2.94e-48 172
MS.gene013480.t1 AT5G62380 48.485 165 82 2 18 181 3 165 2.94e-48 172
MS.gene013480.t1 AT4G10350 49.383 162 81 1 14 174 1 162 4.21e-48 171
MS.gene013480.t1 AT3G10480 45.813 203 72 3 8 174 13 213 7.17e-48 175
MS.gene013480.t1 AT2G27300 50.633 158 70 3 17 174 9 158 9.45e-48 170
MS.gene013480.t1 AT1G32510 50.303 165 74 2 22 178 6 170 3.02e-47 167
MS.gene013480.t1 AT2G18060 51.634 153 71 2 21 172 8 158 3.43e-47 169
MS.gene013480.t1 AT2G18060 51.634 153 71 2 21 172 8 158 3.43e-47 169
MS.gene013480.t1 AT1G33280 51.948 154 70 2 22 174 8 158 4.97e-47 167
MS.gene013480.t1 AT3G18400 53.289 152 66 3 22 172 5 152 5.08e-47 167
MS.gene013480.t1 AT3G29035 56.291 151 62 3 22 170 24 172 5.09e-47 168
MS.gene013480.t1 AT4G36160 42.857 196 105 3 21 215 9 198 6.84e-47 169
MS.gene013480.t1 AT4G36160 42.857 196 105 3 21 215 9 198 6.84e-47 169
MS.gene013480.t1 AT4G36160 42.857 196 105 3 21 215 13 202 7.06e-47 169
MS.gene013480.t1 AT3G04060 48.588 177 76 4 22 190 20 189 7.32e-47 168
MS.gene013480.t1 AT3G44290 52.318 151 63 3 25 175 17 158 1.40e-46 164
MS.gene013480.t1 AT2G24430 53.165 158 69 3 21 176 15 169 1.43e-46 166
MS.gene013480.t1 AT2G24430 53.165 158 69 3 21 176 15 169 1.43e-46 166
MS.gene013480.t1 AT5G22290 48.780 164 76 3 12 175 11 166 1.97e-46 167
MS.gene013480.t1 AT5G18270 52.795 161 71 3 19 176 18 176 6.21e-46 165
MS.gene013480.t1 AT5G18270 52.795 161 71 3 19 176 18 176 9.72e-46 165
MS.gene013480.t1 AT3G44290 52.318 151 63 3 25 175 17 158 1.08e-45 165
MS.gene013480.t1 AT4G27410 49.375 160 79 1 17 176 9 166 1.79e-45 163
MS.gene013480.t1 AT5G09330 40.081 247 135 6 25 267 9 246 2.02e-45 168
MS.gene013480.t1 AT5G09330 40.081 247 135 6 25 267 9 246 2.02e-45 168
MS.gene013480.t1 AT5G09330 40.081 247 135 6 25 267 9 246 2.02e-45 168
MS.gene013480.t1 AT5G09330 40.081 247 135 6 25 267 9 246 2.02e-45 168
MS.gene013480.t1 AT5G09330 40.081 247 135 6 25 267 9 246 2.02e-45 168
MS.gene013480.t1 AT1G69490 48.521 169 77 3 14 176 1 165 2.85e-45 161
MS.gene013480.t1 AT5G66300 49.351 154 76 2 21 173 11 163 3.77e-45 162
MS.gene013480.t1 AT5G64060 47.134 157 83 0 17 173 1 157 1.15e-44 162
MS.gene013480.t1 AT1G56010 46.032 189 84 6 22 199 19 200 3.67e-44 160
MS.gene013480.t1 AT3G12977 49.375 160 76 4 22 179 18 174 4.27e-44 159
MS.gene013480.t1 AT3G15170 50.932 161 63 4 22 173 20 173 4.61e-44 159
MS.gene013480.t1 AT1G71930 49.673 153 74 2 21 172 8 158 5.56e-44 160
MS.gene013480.t1 AT1G71930 49.673 153 74 2 21 172 8 158 5.56e-44 160
MS.gene013480.t1 AT5G08790 43.689 206 96 5 22 220 7 199 7.36e-44 158
MS.gene013480.t1 AT1G34190 53.020 149 70 0 25 173 19 167 9.43e-44 164
MS.gene013480.t1 AT1G76420 49.383 162 77 3 21 180 21 179 1.06e-43 159
MS.gene013480.t1 AT1G34180 51.678 149 72 0 25 173 19 167 1.96e-43 161
MS.gene013480.t1 AT2G02450 50.336 149 69 3 25 172 54 198 2.15e-43 160
MS.gene013480.t1 AT2G02450 50.336 149 69 3 25 172 54 198 2.32e-43 159
MS.gene013480.t1 AT2G33480 52.632 152 65 3 22 172 15 160 3.31e-43 156
MS.gene013480.t1 AT3G15500 49.359 156 77 1 17 172 9 162 3.81e-43 157
MS.gene013480.t1 AT3G04070 46.067 178 82 5 20 185 8 183 5.08e-43 157
MS.gene013480.t1 AT1G52890 49.359 156 77 1 17 172 9 162 5.12e-43 157
MS.gene013480.t1 AT1G34180 51.678 149 72 0 25 173 19 167 7.83e-43 162
MS.gene013480.t1 AT4G27410 45.143 175 81 1 17 176 9 183 1.09e-42 156
MS.gene013480.t1 AT1G26870 44.785 163 77 3 25 176 19 179 1.20e-42 159
MS.gene013480.t1 AT2G46770 40.394 203 98 4 14 193 8 210 1.71e-42 157
MS.gene013480.t1 AT1G01720 48.750 160 71 4 19 172 4 158 1.78e-42 154
MS.gene013480.t1 AT5G53950 50.932 161 63 4 22 173 17 170 2.79e-42 156
MS.gene013480.t1 AT5G13180 46.199 171 79 4 4 172 1 160 4.08e-42 152
MS.gene013480.t1 AT2G33480 50.993 151 67 2 22 172 15 158 6.21e-42 152
MS.gene013480.t1 AT1G32770 38.298 235 110 7 12 226 3 222 8.73e-42 154
MS.gene013480.t1 AT5G63790 50.314 159 67 5 21 172 49 202 1.02e-41 153
MS.gene013480.t1 AT5G63790 50.314 159 67 5 21 172 59 212 1.18e-41 153
MS.gene013480.t1 AT5G39820 43.931 173 72 5 25 174 23 193 1.91e-41 153
MS.gene013480.t1 AT1G77450 48.077 156 71 4 22 172 10 160 3.57e-41 150
MS.gene013480.t1 AT2G43000 47.097 155 78 3 20 172 15 167 5.40e-41 150
MS.gene013480.t1 AT1G61110 48.485 165 70 4 22 173 16 178 9.78e-41 150
MS.gene013480.t1 AT3G04070 42.487 193 81 5 21 185 9 199 1.69e-40 151
MS.gene013480.t1 AT3G15510 44.379 169 79 3 26 181 21 187 3.07e-40 150
MS.gene013480.t1 AT1G34180 47.826 161 72 1 25 173 19 179 3.16e-40 152
MS.gene013480.t1 AT1G79580 47.134 157 78 3 21 175 16 169 3.91e-40 150
MS.gene013480.t1 AT1G79580 47.134 157 78 3 21 175 16 169 3.91e-40 150
MS.gene013480.t1 AT1G79580 47.134 157 78 3 21 175 16 169 3.91e-40 150
MS.gene013480.t1 AT1G79580 47.134 157 78 3 21 175 16 169 3.91e-40 150
MS.gene013480.t1 AT1G79580 47.134 157 78 3 21 175 16 169 3.91e-40 150
MS.gene013480.t1 AT3G61910 42.135 178 83 3 14 174 3 177 4.91e-40 149
MS.gene013480.t1 AT1G34180 47.826 161 72 1 25 173 19 179 1.23e-39 153
MS.gene013480.t1 AT2G17040 46.358 151 71 3 25 172 9 152 7.40e-38 141
MS.gene013480.t1 AT4G28530 37.387 222 115 4 22 225 10 225 2.93e-37 142
MS.gene013480.t1 AT5G04395 47.183 142 61 2 20 147 26 167 1.23e-36 135
MS.gene013480.t1 AT1G32870 50.327 153 72 2 22 172 10 160 2.05e-36 143
MS.gene013480.t1 AT1G32870 50.327 153 72 2 22 172 10 160 2.16e-36 143
MS.gene013480.t1 AT1G32870 50.000 154 73 2 22 173 46 197 4.97e-36 142
MS.gene013480.t1 AT4G01550 44.654 159 73 4 24 175 6 156 5.87e-35 138
MS.gene013480.t1 AT5G61430 42.197 173 87 4 77 245 6 169 1.33e-34 132
MS.gene013480.t1 AT3G12910 41.237 194 79 8 25 190 24 210 5.52e-34 131
MS.gene013480.t1 AT1G52880 44.785 163 76 4 26 176 21 181 9.12e-34 131
MS.gene013480.t1 AT3G12977 51.376 109 52 1 72 179 13 121 3.17e-32 124
MS.gene013480.t1 AT1G02230 39.779 181 92 9 23 194 4 176 2.28e-31 125
MS.gene013480.t1 AT4G01520 39.759 166 83 6 23 180 5 161 8.43e-31 122
MS.gene013480.t1 AT4G10350 53.125 96 45 0 79 174 20 115 4.52e-30 120
MS.gene013480.t1 AT4G01540 38.788 165 84 6 24 180 6 161 3.16e-29 120
MS.gene013480.t1 AT4G01540 38.788 165 84 6 24 180 6 161 3.40e-29 120
MS.gene013480.t1 AT5G22380 37.975 158 91 4 20 170 3 160 4.27e-29 115
MS.gene013480.t1 AT4G01540 38.788 165 84 6 24 180 6 161 7.11e-29 119
MS.gene013480.t1 AT1G56010 48.062 129 60 4 70 193 1 127 7.34e-29 115
MS.gene013480.t1 AT4G01540 38.788 165 84 6 24 180 6 161 9.10e-29 120
MS.gene013480.t1 AT3G44350 38.750 160 93 4 22 176 5 164 2.09e-28 114
MS.gene013480.t1 AT3G04420 37.688 199 104 7 23 209 4 194 7.03e-28 114
MS.gene013480.t1 AT3G04420 37.688 199 104 7 23 209 4 194 1.05e-27 114
MS.gene013480.t1 AT1G02250 37.714 175 94 7 23 190 4 170 1.59e-27 114
MS.gene013480.t1 AT3G44350 41.985 131 72 3 22 148 5 135 4.23e-27 107
MS.gene013480.t1 AT2G33480 51.042 96 47 0 77 172 8 103 6.19e-27 108
MS.gene013480.t1 AT3G10490 65.000 80 27 1 96 174 1 80 1.04e-26 112
MS.gene013480.t1 AT3G10490 65.000 80 27 1 96 174 1 80 1.04e-26 112
MS.gene013480.t1 AT1G01010 36.810 163 86 4 24 176 5 160 1.39e-24 107
MS.gene013480.t1 AT1G02220 37.748 151 82 4 23 170 4 145 2.85e-22 99.8
MS.gene013480.t1 AT4G28530 45.872 109 41 2 22 114 10 116 8.50e-21 94.0
MS.gene013480.t1 AT2G18060 54.286 70 30 1 103 172 3 70 2.07e-19 89.4
MS.gene013480.t1 AT2G43000 44.318 88 48 1 86 172 2 89 8.18e-18 82.4
MS.gene013480.t1 AT5G22290 53.425 73 27 2 103 175 2 67 2.51e-17 82.4
MS.gene013480.t1 AT5G64530 34.109 129 69 4 21 147 2 116 2.60e-17 80.1
MS.gene013480.t1 AT5G64530 29.412 187 96 6 21 185 2 174 4.50e-17 80.1
MS.gene013480.t1 AT5G14000 31.429 140 90 2 10 147 3 138 3.49e-15 73.9
MS.gene013480.t1 AT5G14000 31.429 140 90 2 10 147 3 138 2.18e-14 72.8
MS.gene013480.t1 AT3G04430 35.294 136 74 5 28 151 6 139 2.80e-14 72.4
MS.gene013480.t1 AT3G56530 27.632 152 105 3 21 170 51 199 6.55e-14 73.6
MS.gene013480.t1 AT3G55210 28.221 163 97 5 22 170 11 167 3.87e-13 70.5
MS.gene013480.t1 AT5G50820 31.298 131 76 4 22 148 17 137 1.08e-12 67.4
MS.gene013480.t1 AT4G28500 31.579 152 80 7 15 147 52 198 1.28e-11 66.2
MS.gene013480.t1 AT1G25580 25.112 223 141 7 6 215 42 251 5.64e-11 65.5
MS.gene013480.t1 AT1G28470 30.667 150 83 7 15 147 70 215 7.33e-11 64.3

Find 167 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCTCATAATTGTATTAT+AGG 0.165272 3.4:+84953216 None:intergenic
GAGAGATTGATGTCTGTAAA+TGG 0.244895 3.4:-84955880 MS.gene013480:CDS
CCATCGGATGTTAATAATAC+TGG 0.246728 3.4:-84953280 MS.gene013480:CDS
CCAAAGGGAAGAGGACTAAT+TGG 0.267361 3.4:-84954851 MS.gene013480:CDS
GGATCGGATTGTATTTCTTC+TGG 0.279793 3.4:+84954552 None:intergenic
TATTTCTTCTGGAGAGTAAT+TGG 0.285534 3.4:+84954563 None:intergenic
CCAATTAGTCCTCTTCCCTT+TGG 0.296425 3.4:+84954851 None:intergenic
CAATTAGTCCTCTTCCCTTT+GGG 0.307407 3.4:+84954852 None:intergenic
ATGGAAATGGTGACGAGGTT+TGG 0.308267 3.4:-84955910 MS.gene013480:CDS
CTAACAATAGACCATCTTTC+GGG 0.319486 3.4:+84953870 None:intergenic
AATGTTAAGGACAGTGGTTC+AGG 0.328510 3.4:-84953647 MS.gene013480:CDS
CGAGGTTACAGCATTAGATA+TGG 0.348081 3.4:+84954449 None:intergenic
TGGAAATGGTGACGAGGTTT+GGG 0.354029 3.4:-84955909 MS.gene013480:CDS
CTTCCCCATGTTAAATGTTA+AGG 0.357270 3.4:-84953660 MS.gene013480:CDS
GCAAACTACTTCAGCTCCTT+TGG 0.357575 3.4:-84954589 MS.gene013480:CDS
TAGCAGCCTTTACTAACATA+TGG 0.362315 3.4:-84952706 MS.gene013480:CDS
CAGATTATTCTCCCCACCTT+TGG 0.375953 3.4:-84953843 MS.gene013480:CDS
CATGGATACTGGAAGGCAAC+AGG 0.381571 3.4:-84954951 MS.gene013480:CDS
GCAGTTACTTACAGTCATAT+TGG 0.382336 3.4:+84953601 None:intergenic
TCTAACAATAGACCATCTTT+CGG 0.384925 3.4:+84953869 None:intergenic
AAGGATCGTAAAATCAAATC+TGG 0.393585 3.4:-84954927 MS.gene013480:CDS
CTGTTCAATCGATGTCCGTT+TGG 0.395786 3.4:+84954984 None:intergenic
TTTCTTACCACAGCAATAAT+CGG 0.399051 3.4:+84953022 None:intergenic
ATGGTTTCCTCAGAGATATC+AGG 0.402055 3.4:+84954468 None:intergenic
GAGCAACAAATCATGGATAC+TGG 0.402836 3.4:-84954962 MS.gene013480:CDS
AGAAAAGAATTTACCTGTCC+CGG 0.402976 3.4:+84954780 None:intergenic
AAATCTGGAACCATCTTGAT+TGG 0.406417 3.4:-84954912 MS.gene013480:CDS
ATATTTCCTGCAGGAGGATC+AGG 0.408393 3.4:-84953918 MS.gene013480:intron
TCTTTGAATTCACTTCCGTT+AGG 0.411767 3.4:-84955992 MS.gene013480:CDS
ACATTTAACATGGGGAAGTT+CGG 0.413654 3.4:+84953665 None:intergenic
CTTTGAATTCACTTCCGTTA+GGG 0.418516 3.4:-84955991 MS.gene013480:CDS
TTGTTCGTCTCGTGCTGGCC+GGG 0.422165 3.4:+84953171 None:intergenic
TGTGATGTGGATACTGTAAT+AGG 0.423403 3.4:+84954525 None:intergenic
TGTAGTTTCTGCATCTGTGC+TGG 0.428757 3.4:-84952735 MS.gene013480:CDS
GGTCGATGTGGGCTTCAGTA+TGG 0.428907 3.4:-84953773 MS.gene013480:CDS
CCCACCCTCAAGGAGCTTGA+TGG 0.429254 3.4:-84954810 MS.gene013480:CDS
ATTGTTCGTCTCGTGCTGGC+CGG 0.429734 3.4:+84953170 None:intergenic
AGCAGCCTTTACTAACATAT+GGG 0.436241 3.4:-84952705 MS.gene013480:CDS
TTCTCTTGATTGTGTTCCAT+CGG 0.437033 3.4:-84956038 MS.gene013480:CDS
AACGACGGTGTTGTCGCAAA+AGG 0.438910 3.4:+84953382 None:intergenic
AATAATCGACAGAGGACATA+TGG 0.439649 3.4:+84954660 None:intergenic
TGTCTCATGTGGGATGGTTA+AGG 0.445720 3.4:-84953086 MS.gene013480:CDS
CGTTCGAAGATCAATGGAAA+TGG 0.451849 3.4:-84955923 MS.gene013480:CDS
TACTTACGTTCGAAGATCAA+TGG 0.455738 3.4:-84955929 MS.gene013480:CDS
ATAATTGTATTATAGGTCCT+TGG 0.455759 3.4:+84953223 None:intergenic
GTGGTTCTTCTTCTGTCCTC+AGG 0.458036 3.4:-84955018 MS.gene013480:CDS
TTAAATTGTTCGTCTCGTGC+TGG 0.459827 3.4:+84953166 None:intergenic
GTACTGCTCAAAGGAGAATT+CGG 0.460146 3.4:-84953126 MS.gene013480:CDS
CATCCGATGGAAAAGCCGTC+TGG 0.463423 3.4:+84953293 None:intergenic
TTGAACAGAGCAACAAATCA+TGG 0.463690 3.4:-84954969 MS.gene013480:CDS
CTTCTTCATTCCAATCAAGA+TGG 0.465917 3.4:+84954902 None:intergenic
GGTACCATCAAGCTCCTTGA+GGG 0.487153 3.4:+84954806 None:intergenic
AGCTGCGGAAAATCATGCTT+CGG 0.489248 3.4:-84952918 MS.gene013480:CDS
GTCAATTGCAAATGCAAGCA+AGG 0.491036 3.4:-84952840 MS.gene013480:CDS
TGTGTTCCATCGGTCGATGA+TGG 0.492641 3.4:-84956028 MS.gene013480:CDS
AGAGATTGATGTCTGTAAAT+GGG 0.493465 3.4:-84955879 MS.gene013480:CDS
ACAATTATGAGCAGTGAAAG+TGG 0.495068 3.4:-84953208 MS.gene013480:CDS
AGAAGACCACAGAGCACAGT+TGG 0.499893 3.4:+84952763 None:intergenic
CAAAGGGAAGAGGACTAATT+GGG 0.501722 3.4:-84954850 MS.gene013480:CDS
TGGTTGCTCATATCCATTGA+CGG 0.503137 3.4:+84953243 None:intergenic
TTCAGGAAGCAACTCGGATG+TGG 0.505403 3.4:-84953630 MS.gene013480:CDS
GTGACTAACGGACACCTCAC+AGG 0.510714 3.4:+84953691 None:intergenic
GTGGAATTGTAAGGAGGGCC+CGG 0.518559 3.4:-84953189 MS.gene013480:CDS
ATGTATTATAACCCGAAAGA+TGG 0.525399 3.4:-84953881 MS.gene013480:CDS
TGATGGTACCAACCCGGGAC+AGG 0.525518 3.4:-84954793 MS.gene013480:intron
CTTTGAGCAGTACCTTGCAT+CGG 0.525564 3.4:+84953136 None:intergenic
TTAACATGGGGAAGTTCGGC+TGG 0.526190 3.4:+84953669 None:intergenic
CATATCTAATGCTGTAACCT+CGG 0.526983 3.4:-84954448 MS.gene013480:CDS
GAAGTGTACAATGCCGTCAA+TGG 0.528860 3.4:-84953256 MS.gene013480:CDS
TGGGAACCCTGGGACATGCC+TGG 0.531073 3.4:-84955860 MS.gene013480:intron
GTGTTCCATCGGTCGATGAT+GGG 0.532265 3.4:-84956027 MS.gene013480:CDS
GAAAAGAATTTACCTGTCCC+GGG 0.534071 3.4:+84954781 None:intergenic
TACAGTGGTCGTGCACCCAA+AGG 0.535914 3.4:-84954867 MS.gene013480:CDS
TTCAAAACCGATTATTGCTG+TGG 0.538149 3.4:-84953029 MS.gene013480:intron
TCGATAAGTTCCTCGTCAGT+AGG 0.541389 3.4:+84955956 None:intergenic
TACTGTAATAGGAGCCGGAT+CGG 0.541508 3.4:+84954536 None:intergenic
TGGTACCATCAAGCTCCTTG+AGG 0.544119 3.4:+84954805 None:intergenic
CACGGAAGAGGATAAGCAGC+TGG 0.545379 3.4:-84954499 MS.gene013480:CDS
AGAAGAAATACAATCCGATC+CGG 0.550316 3.4:-84954550 MS.gene013480:CDS
ATATCCCCATATGTTAGTAA+AGG 0.553903 3.4:+84952700 None:intergenic
ACAGTGGTCGTGCACCCAAA+GGG 0.554173 3.4:-84954866 MS.gene013480:CDS
CCAGTATTATTAACATCCGA+TGG 0.557242 3.4:+84953280 None:intergenic
AGACCACAGAGCACAGTTGG+AGG 0.558113 3.4:+84952766 None:intergenic
GTCGTGCACCCAAAGGGAAG+AGG 0.558317 3.4:-84954860 MS.gene013480:CDS
CACATCACAGGTCACGGAAG+AGG 0.559271 3.4:-84954511 MS.gene013480:CDS
CTGTCCTTAACATTTAACAT+GGG 0.559386 3.4:+84953656 None:intergenic
GTGGATACTGTAATAGGAGC+CGG 0.562139 3.4:+84954531 None:intergenic
GCAGTGAAAGTGGAATTGTA+AGG 0.564087 3.4:-84953198 MS.gene013480:CDS
CTCTTCCGTGACCTGTGATG+TGG 0.566229 3.4:+84954512 None:intergenic
AGTGGTACGAAACAAGGATC+CGG 0.568363 3.4:-84955042 MS.gene013480:CDS
ACCATCAAGCTCCTTGAGGG+TGG 0.568524 3.4:+84954809 None:intergenic
GTGGCATATGCACCAAAGGT+GGG 0.571599 3.4:+84953831 None:intergenic
TTTGTCAGTGGTACGAAACA+AGG 0.573682 3.4:-84955048 MS.gene013480:CDS
CGATGCAAGGTACTGCTCAA+AGG 0.575026 3.4:-84953135 MS.gene013480:CDS
AAGATTGAACATGTCTCATG+TGG 0.575379 3.4:-84953097 MS.gene013480:CDS
TCAATTGCAAATGCAAGCAA+GGG 0.575808 3.4:-84952839 MS.gene013480:CDS
ACTGTCCTTAACATTTAACA+TGG 0.576387 3.4:+84953655 None:intergenic
GCTTGATAGTGAAATTCTTG+TGG 0.577677 3.4:+84953812 None:intergenic
AATTGCAAAACTAGCTGCAG+AGG 0.578693 3.4:-84954379 MS.gene013480:intron
CAAGCGAACAATGAATCAGA+TGG 0.579515 3.4:-84953794 MS.gene013480:CDS
CAGGATCGCAAGTATCCAAA+CGG 0.580718 3.4:-84954999 MS.gene013480:CDS
ATTTACAGACATCAATCTCT+CGG 0.583234 3.4:+84955882 None:intergenic
GAGCATCATATCCATCGCTA+TGG 0.583583 3.4:+84954418 None:intergenic
TCATGCATGTAAACAGAGGA+AGG 0.584990 3.4:-84952870 MS.gene013480:CDS
TCCATCGGTCGATGATGGGA+TGG 0.586571 3.4:-84956023 MS.gene013480:CDS
TGAGTATCGTCCCACCCTCA+AGG 0.587441 3.4:-84954820 MS.gene013480:CDS
AGAATTTACCTGTCCCGGGT+TGG 0.588022 3.4:+84954785 None:intergenic
ATCATCACCACTGTAATCAA+AGG 0.589896 3.4:+84953351 None:intergenic
TGGTTTCCTCAGAGATATCA+GGG 0.590219 3.4:+84954469 None:intergenic
TAAGTTCCTCGTCAGTAGGT+CGG 0.593408 3.4:+84955960 None:intergenic
GAGCTTGATGGTACCAACCC+GGG 0.595115 3.4:-84954798 MS.gene013480:CDS
AGTTTCAAACTGTGGTGAAG+TGG 0.597493 3.4:-84954613 MS.gene013480:CDS
ATGTCTGTAAATGGGAACCC+TGG 0.597611 3.4:-84955871 MS.gene013480:CDS
ATTACAAAACAATTTCCAGA+CGG 0.599672 3.4:-84953308 MS.gene013480:CDS
GGAGAGTAATTGGCAGCCAA+AGG 0.600092 3.4:+84954573 None:intergenic
GAGGAAGTCTTTGATCTGAA+AGG 0.601808 3.4:+84952785 None:intergenic
TCGGTTGATTACCATAGCGA+TGG 0.603183 3.4:-84954429 MS.gene013480:CDS
GAAGTTCGGCTGGTGACTAA+CGG 0.603490 3.4:+84953679 None:intergenic
TTTGGATACTTGCGATCCTG+AGG 0.603602 3.4:+84955002 None:intergenic
ATGTTAAATGTTAAGGACAG+TGG 0.603691 3.4:-84953653 MS.gene013480:CDS
AATGAATCAGATGGTCGATG+TGG 0.606511 3.4:-84953785 MS.gene013480:CDS
TATTACAGTATCCACATCAC+AGG 0.607630 3.4:-84954523 MS.gene013480:CDS
ATGAATCAGATGGTCGATGT+GGG 0.608643 3.4:-84953784 MS.gene013480:CDS
CCATCAAGCTCCTTGAGGGT+GGG 0.612423 3.4:+84954810 None:intergenic
TGTGGCATATGCACCAAAGG+TGG 0.615705 3.4:+84953830 None:intergenic
TTTAAATTATGATCTTAACT+GGG 0.616370 3.4:-84953723 MS.gene013480:CDS
GGTCGGAATCGAAACCCTAA+CGG 0.616800 3.4:+84955977 None:intergenic
AACAAATCATGGATACTGGA+AGG 0.619020 3.4:-84954958 MS.gene013480:CDS
TGAAAGTGGAATTGTAAGGA+GGG 0.619029 3.4:-84953194 MS.gene013480:CDS
TCTTGTGGCATATGCACCAA+AGG 0.619439 3.4:+84953827 None:intergenic
CAGTGGTTCAGGAAGCAACT+CGG 0.619958 3.4:-84953636 MS.gene013480:CDS
CTTCCTCCAACTGTGCTCTG+TGG 0.620880 3.4:-84952769 MS.gene013480:CDS
AGCCACACCTTTGATTACAG+TGG 0.625963 3.4:-84953358 MS.gene013480:CDS
GCCATCCCATCATCGACCGA+TGG 0.629071 3.4:+84956022 None:intergenic
GCAGCCTTTACTAACATATG+GGG 0.629075 3.4:-84952704 MS.gene013480:CDS
CACCACTGTAATCAAAGGTG+TGG 0.629668 3.4:+84953356 None:intergenic
GTGAAAGTGGAATTGTAAGG+AGG 0.630041 3.4:-84953195 MS.gene013480:CDS
CTCACGAGGCAATTGACAGA+AGG 0.630848 3.4:-84953408 MS.gene013480:CDS
TTTAAGACAAATCCGATGCA+AGG 0.634026 3.4:-84953148 MS.gene013480:CDS
AAAATACCAGGCATGTCCCA+GGG 0.634126 3.4:+84955854 None:intergenic
GTTTGTTGTAGATTTGTCAG+TGG 0.637707 3.4:-84955060 MS.gene013480:intron
ATGGATACTGGAAGGCAACA+GGG 0.638784 3.4:-84954950 MS.gene013480:CDS
CTTCTGTCAATTGCCTCGTG+AGG 0.643214 3.4:+84953409 None:intergenic
GGAGCTTGATGGTACCAACC+CGG 0.644442 3.4:-84954799 MS.gene013480:CDS
AGTATCCACATCACAGGTCA+CGG 0.646407 3.4:-84954517 MS.gene013480:CDS
TGACTAACGGACACCTCACA+GGG 0.648297 3.4:+84953692 None:intergenic
TGTCCTTAACATTTAACATG+GGG 0.648596 3.4:+84953657 None:intergenic
TGTCTGTAAATGGGAACCCT+GGG 0.651893 3.4:-84955870 MS.gene013480:CDS
ATACTGGAAGGCAACAGGGA+AGG 0.655689 3.4:-84954946 MS.gene013480:CDS
TGGCATATGCACCAAAGGTG+GGG 0.660078 3.4:+84953832 None:intergenic
TTTGCAGGAGAAGAAAGCTG+CGG 0.665650 3.4:-84952933 MS.gene013480:intron
CAATTGCAAATGCAAGCAAG+GGG 0.668319 3.4:-84952838 MS.gene013480:CDS
TCAATGGATATGAGCAACCA+AGG 0.669058 3.4:-84953240 MS.gene013480:CDS
ATCGGTCGATGATGGGATGG+CGG 0.670540 3.4:-84956020 MS.gene013480:CDS
CTAATCATGCATGTAAACAG+AGG 0.675091 3.4:-84952874 MS.gene013480:CDS
TGAACATGTCTCATGTGGGA+TGG 0.675641 3.4:-84953092 MS.gene013480:CDS
GCAAGCTGCTTATCCTCACG+AGG 0.677048 3.4:-84953422 MS.gene013480:CDS
AGCATTGAAGTTTCAAACTG+TGG 0.683843 3.4:-84954621 MS.gene013480:CDS
TCAAAGGTGTGGCTAAACGA+CGG 0.685567 3.4:+84953367 None:intergenic
GGACAGAAGAAGAACCACTC+CGG 0.686334 3.4:+84955023 None:intergenic
CTGGGATCAAATTCCCTGTG+AGG 0.690111 3.4:-84953705 MS.gene013480:CDS
TCGATTCCGACCTACTGACG+AGG 0.696170 3.4:-84955966 MS.gene013480:CDS
TGTTATCCCTGATATCTCTG+AGG 0.698772 3.4:-84954475 MS.gene013480:CDS
ATCGCTATGGTAATCAACCG+AGG 0.702461 3.4:+84954431 None:intergenic
AGATTGAACATGTCTCATGT+GGG 0.719131 3.4:-84953096 MS.gene013480:CDS
GATCAATGGAAATGGTGACG+AGG 0.722632 3.4:-84955915 MS.gene013480:CDS
TACGAAACAAGGATCCGGAG+TGG 0.730421 3.4:-84955037 MS.gene013480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTATTTATGTTTATTAAC+TGG - chr3.4:84953029-84953048 MS.gene013480:intron 15.0%
!! TTTAAATTATGATCTTAACT+GGG - chr3.4:84955008-84955027 MS.gene013480:CDS 15.0%
!!! AGATTGTTTAAAAAAGTTTT+TGG - chr3.4:84953066-84953085 MS.gene013480:CDS 15.0%
!!! TTAAGAAATTTTTTATTGCT+AGG - chr3.4:84955916-84955935 MS.gene013480:CDS 15.0%
!!! TTTTAAATTATGATCTTAAC+TGG - chr3.4:84955007-84955026 MS.gene013480:CDS 15.0%
!! AAAAAGAAAAGAAAAATACC+AGG + chr3.4:84952892-84952911 None:intergenic 20.0%
!! TATATAAATAGCTTATACAC+AGG - chr3.4:84953227-84953246 MS.gene013480:CDS 20.0%
!!! ATATTCTCATTTTATGATGT+AGG - chr3.4:84955282-84955301 MS.gene013480:intron 20.0%
!!! CATTCAGATATATTTCTTTT+AGG - chr3.4:84954475-84954494 MS.gene013480:CDS 20.0%
!!! CTTTTTTAGCTAATAAAACT+AGG + chr3.4:84954574-84954593 None:intergenic 20.0%
!!! GGTTTTTTATGCTAATAAAA+TGG + chr3.4:84954553-84954572 None:intergenic 20.0%
!!! TACATATTTTAAATTCAGTG+TGG - chr3.4:84954507-84954526 MS.gene013480:CDS 20.0%
!!! TATTCTCATTTTATGATGTA+GGG - chr3.4:84955283-84955302 MS.gene013480:intron 20.0%
!!! TGATGTTTTGAGTAATAAAT+AGG - chr3.4:84953604-84953623 MS.gene013480:intron 20.0%
!!! TGATTTGATTTTAATTGCAT+TGG - chr3.4:84954764-84954783 MS.gene013480:intron 20.0%
! AAAACAGAAAAAACAGATCA+AGG + chr3.4:84953571-84953590 None:intergenic 25.0%
! AATTAAACTGTCTTCGTATA+TGG - chr3.4:84953334-84953353 MS.gene013480:CDS 25.0%
! ACTGCTCATAATTGTATTAT+AGG + chr3.4:84955518-84955537 None:intergenic 25.0%
! AGAGAAACTAATTATGAGAA+TGG - chr3.4:84954592-84954611 MS.gene013480:CDS 25.0%
! ATAATTGTATTATAGGTCCT+TGG + chr3.4:84955511-84955530 None:intergenic 25.0%
! ATTACAAAACAATTTCCAGA+CGG - chr3.4:84955423-84955442 MS.gene013480:intron 25.0%
! CTCATAATTTCATCTTGATT+TGG - chr3.4:84952925-84952944 MS.gene013480:CDS 25.0%
! CTTATCATATAAGTGGTTAT+AGG + chr3.4:84953505-84953524 None:intergenic 25.0%
! TCTAGCTAAGAAATTACTAT+AGG - chr3.4:84953991-84954010 MS.gene013480:intron 25.0%
! TCTTAGCTAGATGTAAAAAT+AGG + chr3.4:84953982-84954001 None:intergenic 25.0%
! TGCAATTAAAATCAAATCAG+AGG + chr3.4:84954763-84954782 None:intergenic 25.0%
! TTAAGCTATTTATCCAAACA+AGG - chr3.4:84953545-84953564 MS.gene013480:intron 25.0%
!! TAAATTTCACAAGCTTTTAC+CGG + chr3.4:84953403-84953422 None:intergenic 25.0%
!! TTTTCTTAAATAATCGACAG+AGG + chr3.4:84954082-84954101 None:intergenic 25.0%
!!! CTAGTTTTGCAATTTGATTT+TGG + chr3.4:84954346-84954365 None:intergenic 25.0%
!!! CTATAATTGCTAGTTTTTAG+AGG - chr3.4:84954396-84954415 MS.gene013480:CDS 25.0%
!!! GATCTGTTTTTTCTGTTTTA+AGG - chr3.4:84953572-84953591 MS.gene013480:intron 25.0%
AAGGATCGTAAAATCAAATC+TGG - chr3.4:84953804-84953823 MS.gene013480:CDS 30.0%
AATATTTGCATAGATCGCAT+CGG - chr3.4:84952988-84953007 MS.gene013480:intron 30.0%
ACTGTCCTTAACATTTAACA+TGG + chr3.4:84955079-84955098 None:intergenic 30.0%
AGAGATTGATGTCTGTAAAT+GGG - chr3.4:84952852-84952871 MS.gene013480:CDS 30.0%
ATATCCCCATATGTTAGTAA+AGG + chr3.4:84956034-84956053 None:intergenic 30.0%
ATGTATTATAACCCGAAAGA+TGG - chr3.4:84954850-84954869 MS.gene013480:CDS 30.0%
ATGTTAAATGTTAAGGACAG+TGG - chr3.4:84955078-84955097 MS.gene013480:intron 30.0%
ATTTACAGACATCAATCTCT+CGG + chr3.4:84952852-84952871 None:intergenic 30.0%
ATTTATTGTTCGGTCAATCT+TGG - chr3.4:84955162-84955181 MS.gene013480:intron 30.0%
CACTTAAGTTTAGGAAACTA+CGG + chr3.4:84955213-84955232 None:intergenic 30.0%
CAGAACTTATGAAAATAAGC+CGG - chr3.4:84953381-84953400 MS.gene013480:CDS 30.0%
CAGCTCAAACAATTAAATGT+GGG - chr3.4:84955234-84955253 MS.gene013480:intron 30.0%
CTCTAACGACATTTATTGTT+CGG - chr3.4:84955152-84955171 MS.gene013480:intron 30.0%
CTGTCCTTAACATTTAACAT+GGG + chr3.4:84955078-84955097 None:intergenic 30.0%
TCAAGTGCTTATCATATAAG+TGG + chr3.4:84953512-84953531 None:intergenic 30.0%
TCTAACAATAGACCATCTTT+CGG + chr3.4:84954865-84954884 None:intergenic 30.0%
TGTCCTTAACATTTAACATG+GGG + chr3.4:84955077-84955096 None:intergenic 30.0%
TTACGGAAATAAGCTGAAAA+CGG + chr3.4:84953117-84953136 None:intergenic 30.0%
TTATACTTGATATTTCCTGC+AGG - chr3.4:84954804-84954823 MS.gene013480:CDS 30.0%
TTTCTTACCACAGCAATAAT+CGG + chr3.4:84955712-84955731 None:intergenic 30.0%
! AACTCTCAAAATTTTCAGAG+AGG + chr3.4:84954655-84954674 None:intergenic 30.0%
! ACTCTCAAAATTTTCAGAGA+GGG + chr3.4:84954654-84954673 None:intergenic 30.0%
! TATTTCTTCTGGAGAGTAAT+TGG + chr3.4:84954171-84954190 None:intergenic 30.0%
!!! AAGACTTTAGTTTTCTACAG+TGG - chr3.4:84953849-84953868 MS.gene013480:CDS 30.0%
!!! AATTGCTAGTTTTTAGAGGT+TGG - chr3.4:84954400-84954419 MS.gene013480:CDS 30.0%
!!! TTGCTGATTTTTCATCTGTT+GGG - chr3.4:84953649-84953668 MS.gene013480:CDS 30.0%
!!! TTTGCTGATTTTTCATCTGT+TGG - chr3.4:84953648-84953667 MS.gene013480:CDS 30.0%
AACAAATCATGGATACTGGA+AGG - chr3.4:84953773-84953792 MS.gene013480:CDS 35.0%
AAGATTGAACATGTCTCATG+TGG - chr3.4:84955634-84955653 MS.gene013480:intron 35.0%
AAGTGGTTATAGGCCTATTT+GGG + chr3.4:84953495-84953514 None:intergenic 35.0%
AATAATCGACAGAGGACATA+TGG + chr3.4:84954074-84954093 None:intergenic 35.0%
ACAATTATGAGCAGTGAAAG+TGG - chr3.4:84955523-84955542 MS.gene013480:intron 35.0%
ACATTTAACATGGGGAAGTT+CGG + chr3.4:84955069-84955088 None:intergenic 35.0%
AGAAAAGAATTTACCTGTCC+CGG + chr3.4:84953954-84953973 None:intergenic 35.0%
AGAAGAAATACAATCCGATC+CGG - chr3.4:84954181-84954200 MS.gene013480:intron 35.0%
AGATTGAACATGTCTCATGT+GGG - chr3.4:84955635-84955654 MS.gene013480:intron 35.0%
AGCAGCCTTTACTAACATAT+GGG - chr3.4:84956026-84956045 MS.gene013480:CDS 35.0%
ATCATCACCACTGTAATCAA+AGG + chr3.4:84955383-84955402 None:intergenic 35.0%
CATATCTAATGCTGTAACCT+CGG - chr3.4:84954283-84954302 MS.gene013480:intron 35.0%
CCAGTATTATTAACATCCGA+TGG + chr3.4:84955454-84955473 None:intergenic 35.0%
CCATCGGATGTTAATAATAC+TGG - chr3.4:84955451-84955470 MS.gene013480:intron 35.0%
CGTAGTTTCCTAAACTTAAG+TGG - chr3.4:84955211-84955230 MS.gene013480:intron 35.0%
CTAACAATAGACCATCTTTC+GGG + chr3.4:84954864-84954883 None:intergenic 35.0%
CTAATCATGCATGTAAACAG+AGG - chr3.4:84955857-84955876 MS.gene013480:intron 35.0%
CTTCCCCATGTTAAATGTTA+AGG - chr3.4:84955071-84955090 MS.gene013480:intron 35.0%
CTTCTTCATTCCAATCAAGA+TGG + chr3.4:84953832-84953851 None:intergenic 35.0%
CTTTGAATTCACTTCCGTTA+GGG - chr3.4:84952740-84952759 MS.gene013480:CDS 35.0%
GACATATGGATTCTGATACA+AGG + chr3.4:84954060-84954079 None:intergenic 35.0%
GAGAGATTGATGTCTGTAAA+TGG - chr3.4:84952851-84952870 MS.gene013480:CDS 35.0%
GCAGCTCAAACAATTAAATG+TGG - chr3.4:84955233-84955252 MS.gene013480:intron 35.0%
GCAGTTACTTACAGTCATAT+TGG + chr3.4:84955133-84955152 None:intergenic 35.0%
TAAGTGGTTATAGGCCTATT+TGG + chr3.4:84953496-84953515 None:intergenic 35.0%
TACTTACGTTCGAAGATCAA+TGG - chr3.4:84952802-84952821 MS.gene013480:CDS 35.0%
TAGCAGCCTTTACTAACATA+TGG - chr3.4:84956025-84956044 MS.gene013480:CDS 35.0%
TATTACAGTATCCACATCAC+AGG - chr3.4:84954208-84954227 MS.gene013480:intron 35.0%
TCAAATAAGCCAACCCAAAT+AGG - chr3.4:84953479-84953498 MS.gene013480:intron 35.0%
TCAATTGCAAATGCAAGCAA+GGG - chr3.4:84955892-84955911 MS.gene013480:CDS 35.0%
TCTTTGAATTCACTTCCGTT+AGG - chr3.4:84952739-84952758 MS.gene013480:CDS 35.0%
TGAAAGTGGAATTGTAAGGA+GGG - chr3.4:84955537-84955556 MS.gene013480:intron 35.0%
TGTGATGTGGATACTGTAAT+AGG + chr3.4:84954209-84954228 None:intergenic 35.0%
TTCAAAACCGATTATTGCTG+TGG - chr3.4:84955702-84955721 MS.gene013480:intron 35.0%
TTCTCTTGATTGTGTTCCAT+CGG - chr3.4:84952693-84952712 MS.gene013480:CDS 35.0%
TTGAACAGAGCAACAAATCA+TGG - chr3.4:84953762-84953781 MS.gene013480:CDS 35.0%
! AAATCTGGAACCATCTTGAT+TGG - chr3.4:84953819-84953838 MS.gene013480:CDS 35.0%
! ACTACGGTGTGTTATTATCA+TGG + chr3.4:84955197-84955216 None:intergenic 35.0%
! AGCATTGAAGTTTCAAACTG+TGG - chr3.4:84954110-84954129 MS.gene013480:intron 35.0%
! CTTATTTCCGTAAGCTTTTC+TGG - chr3.4:84953124-84953143 MS.gene013480:CDS 35.0%
! TTTAAGACAAATCCGATGCA+AGG - chr3.4:84955583-84955602 MS.gene013480:intron 35.0%
!! AGCTGTTTTCATAAGTTCTC+CGG - chr3.4:84953427-84953446 MS.gene013480:CDS 35.0%
!! GCTTGATAGTGAAATTCTTG+TGG + chr3.4:84954922-84954941 None:intergenic 35.0%
!! GTTTGTTGTAGATTTGTCAG+TGG - chr3.4:84953671-84953690 MS.gene013480:CDS 35.0%
!! TAAGTTTTGTGAGACTGTTC+CGG + chr3.4:84953449-84953468 None:intergenic 35.0%
!!! GAGGTTTGTTTCTATTTTGC+AGG - chr3.4:84955783-84955802 MS.gene013480:intron 35.0%
!!! GTTTGCTTATTTTGCTTGCT+TGG - chr3.4:84955733-84955752 MS.gene013480:intron 35.0%
AATGAATCAGATGGTCGATG+TGG - chr3.4:84954946-84954965 MS.gene013480:CDS 40.0%
AATGTTAAGGACAGTGGTTC+AGG - chr3.4:84955084-84955103 MS.gene013480:intron 40.0%
AATTAAATGTGGGCTTGTCG+TGG - chr3.4:84955244-84955263 MS.gene013480:intron 40.0%
AATTGCAAAACTAGCTGCAG+AGG - chr3.4:84954352-84954371 MS.gene013480:intron 40.0%
AGTTTCAAACTGTGGTGAAG+TGG - chr3.4:84954118-84954137 MS.gene013480:intron 40.0%
ATGAATCAGATGGTCGATGT+GGG - chr3.4:84954947-84954966 MS.gene013480:CDS 40.0%
ATGCTCTCCAGAAAAGCTTA+CGG + chr3.4:84953134-84953153 None:intergenic 40.0%
ATGGTTTCCTCAGAGATATC+AGG + chr3.4:84954266-84954285 None:intergenic 40.0%
CAAAGGGAAGAGGACTAATT+GGG - chr3.4:84953881-84953900 MS.gene013480:CDS 40.0%
CAAGCGAACAATGAATCAGA+TGG - chr3.4:84954937-84954956 MS.gene013480:CDS 40.0%
CAATTAGTCCTCTTCCCTTT+GGG + chr3.4:84953882-84953901 None:intergenic 40.0%
CAATTGCAAATGCAAGCAAG+GGG - chr3.4:84955893-84955912 MS.gene013480:CDS 40.0%
CGAGGTTACAGCATTAGATA+TGG + chr3.4:84954285-84954304 None:intergenic 40.0%
CGTTCGAAGATCAATGGAAA+TGG - chr3.4:84952808-84952827 MS.gene013480:CDS 40.0%
GAAAAGAATTTACCTGTCCC+GGG + chr3.4:84953953-84953972 None:intergenic 40.0%
GAGCAACAAATCATGGATAC+TGG - chr3.4:84953769-84953788 MS.gene013480:CDS 40.0%
GAGGAAGTCTTTGATCTGAA+AGG + chr3.4:84955949-84955968 None:intergenic 40.0%
GCAGCCTTTACTAACATATG+GGG - chr3.4:84956027-84956046 MS.gene013480:CDS 40.0%
GCAGTGAAAGTGGAATTGTA+AGG - chr3.4:84955533-84955552 MS.gene013480:intron 40.0%
GGATCGGATTGTATTTCTTC+TGG + chr3.4:84954182-84954201 None:intergenic 40.0%
GTACTGCTCAAAGGAGAATT+CGG - chr3.4:84955605-84955624 MS.gene013480:intron 40.0%
GTCAATTGCAAATGCAAGCA+AGG - chr3.4:84955891-84955910 MS.gene013480:CDS 40.0%
GTGAAAGTGGAATTGTAAGG+AGG - chr3.4:84955536-84955555 MS.gene013480:intron 40.0%
TACTTGATATTTCCTGCAGG+AGG - chr3.4:84954807-84954826 MS.gene013480:CDS 40.0%
TCAATGGATATGAGCAACCA+AGG - chr3.4:84955491-84955510 MS.gene013480:intron 40.0%
TCATGCATGTAAACAGAGGA+AGG - chr3.4:84955861-84955880 MS.gene013480:CDS 40.0%
TGGTTGCTCATATCCATTGA+CGG + chr3.4:84955491-84955510 None:intergenic 40.0%
TGGTTTCCTCAGAGATATCA+GGG + chr3.4:84954265-84954284 None:intergenic 40.0%
TGTTATCCCTGATATCTCTG+AGG - chr3.4:84954256-84954275 MS.gene013480:intron 40.0%
TTAAATTGTTCGTCTCGTGC+TGG + chr3.4:84955568-84955587 None:intergenic 40.0%
TTTGTCAGTGGTACGAAACA+AGG - chr3.4:84953683-84953702 MS.gene013480:CDS 40.0%
! CTCAAAATTTTCAGAGAGGG+AGG + chr3.4:84954651-84954670 None:intergenic 40.0%
! TTGAGCTGCCACTTAAGTTT+AGG + chr3.4:84955222-84955241 None:intergenic 40.0%
! TTTTCTCTGCATGTGTTGTG+AGG - chr3.4:84955764-84955783 MS.gene013480:intron 40.0%
!! AAACAGATCAAGGCCTTGTT+TGG + chr3.4:84953561-84953580 None:intergenic 40.0%
AAAAATACCAGGCATGTCCC+AGG + chr3.4:84952881-84952900 None:intergenic 45.0%
AAAATACCAGGCATGTCCCA+GGG + chr3.4:84952880-84952899 None:intergenic 45.0%
AGCCACACCTTTGATTACAG+TGG - chr3.4:84955373-84955392 MS.gene013480:intron 45.0%
AGCTGCGGAAAATCATGCTT+CGG - chr3.4:84955813-84955832 MS.gene013480:intron 45.0%
AGTATCCACATCACAGGTCA+CGG - chr3.4:84954214-84954233 MS.gene013480:intron 45.0%
AGTGGTACGAAACAAGGATC+CGG - chr3.4:84953689-84953708 MS.gene013480:CDS 45.0%
ATATTTCCTGCAGGAGGATC+AGG - chr3.4:84954813-84954832 MS.gene013480:CDS 45.0%
ATCGCTATGGTAATCAACCG+AGG + chr3.4:84954303-84954322 None:intergenic 45.0%
ATGGATACTGGAAGGCAACA+GGG - chr3.4:84953781-84953800 MS.gene013480:CDS 45.0%
ATGTCTGTAAATGGGAACCC+TGG - chr3.4:84952860-84952879 MS.gene013480:CDS 45.0%
ATTGTTCGGTCAATCTTGGC+AGG - chr3.4:84955166-84955185 MS.gene013480:intron 45.0%
CACATGCAGAGAAAACCTCT+AGG + chr3.4:84955759-84955778 None:intergenic 45.0%
CACCACTGTAATCAAAGGTG+TGG + chr3.4:84955378-84955397 None:intergenic 45.0%
CAGATTATTCTCCCCACCTT+TGG - chr3.4:84954888-84954907 MS.gene013480:CDS 45.0%
CAGGATCGCAAGTATCCAAA+CGG - chr3.4:84953732-84953751 MS.gene013480:CDS 45.0%
CCAAAGGGAAGAGGACTAAT+TGG - chr3.4:84953880-84953899 MS.gene013480:CDS 45.0%
CCAATTAGTCCTCTTCCCTT+TGG + chr3.4:84953883-84953902 None:intergenic 45.0%
CTGTTCAATCGATGTCCGTT+TGG + chr3.4:84953750-84953769 None:intergenic 45.0%
CTTTGAGCAGTACCTTGCAT+CGG + chr3.4:84955598-84955617 None:intergenic 45.0%
GAAGTGTACAATGCCGTCAA+TGG - chr3.4:84955475-84955494 MS.gene013480:intron 45.0%
GAGCATCATATCCATCGCTA+TGG + chr3.4:84954316-84954335 None:intergenic 45.0%
GCAAACTACTTCAGCTCCTT+TGG - chr3.4:84954142-84954161 MS.gene013480:intron 45.0%
GCTTATACACAGGCTCTGTT+TGG - chr3.4:84953237-84953256 MS.gene013480:CDS 45.0%
GGTTATAGGCCTATTTGGGT+TGG + chr3.4:84953491-84953510 None:intergenic 45.0%
GTGGATACTGTAATAGGAGC+CGG + chr3.4:84954203-84954222 None:intergenic 45.0%
TAAGTTCCTCGTCAGTAGGT+CGG + chr3.4:84952774-84952793 None:intergenic 45.0%
TACTGTAATAGGAGCCGGAT+CGG + chr3.4:84954198-84954217 None:intergenic 45.0%
TCGATAAGTTCCTCGTCAGT+AGG + chr3.4:84952778-84952797 None:intergenic 45.0%
TCGGTTGATTACCATAGCGA+TGG - chr3.4:84954302-84954321 MS.gene013480:intron 45.0%
TCTTGTGGCATATGCACCAA+AGG + chr3.4:84954907-84954926 None:intergenic 45.0%
TGAACATGTCTCATGTGGGA+TGG - chr3.4:84955639-84955658 MS.gene013480:intron 45.0%
TGTAGTTTCTGCATCTGTGC+TGG - chr3.4:84955996-84956015 MS.gene013480:CDS 45.0%
TGTCTCATGTGGGATGGTTA+AGG - chr3.4:84955645-84955664 MS.gene013480:intron 45.0%
TGTCTGTAAATGGGAACCCT+GGG - chr3.4:84952861-84952880 MS.gene013480:CDS 45.0%
TTTGCAGGAGAAGAAAGCTG+CGG - chr3.4:84955798-84955817 MS.gene013480:intron 45.0%
TTTGGATACTTGCGATCCTG+AGG + chr3.4:84953732-84953751 None:intergenic 45.0%
! ATGGAAATGGTGACGAGGTT+TGG - chr3.4:84952821-84952840 MS.gene013480:CDS 45.0%
! ATTTTGCTTGCTTGGCCTAG+AGG - chr3.4:84955741-84955760 MS.gene013480:intron 45.0%
! GATCAATGGAAATGGTGACG+AGG - chr3.4:84952816-84952835 MS.gene013480:CDS 45.0%
! TCAAAGGTGTGGCTAAACGA+CGG + chr3.4:84955367-84955386 None:intergenic 45.0%
! TGGAAATGGTGACGAGGTTT+GGG - chr3.4:84952822-84952841 MS.gene013480:CDS 45.0%
! TTTCCAGACGGCTTTTCCAT+CGG - chr3.4:84955435-84955454 MS.gene013480:intron 45.0%
AGAAGACCACAGAGCACAGT+TGG + chr3.4:84955971-84955990 None:intergenic 50.0%
AGAATTTACCTGTCCCGGGT+TGG + chr3.4:84953949-84953968 None:intergenic 50.0%
ATACTGGAAGGCAACAGGGA+AGG - chr3.4:84953785-84953804 MS.gene013480:CDS 50.0%
CAGTGGTTCAGGAAGCAACT+CGG - chr3.4:84955095-84955114 MS.gene013480:intron 50.0%
CATGGATACTGGAAGGCAAC+AGG - chr3.4:84953780-84953799 MS.gene013480:CDS 50.0%
CTCACGAGGCAATTGACAGA+AGG - chr3.4:84955323-84955342 MS.gene013480:intron 50.0%
CTGGGATCAAATTCCCTGTG+AGG - chr3.4:84955026-84955045 MS.gene013480:CDS 50.0%
CTTCTGTCAATTGCCTCGTG+AGG + chr3.4:84955325-84955344 None:intergenic 50.0%
GAAGTTCGGCTGGTGACTAA+CGG + chr3.4:84955055-84955074 None:intergenic 50.0%
GGACAGAAGAAGAACCACTC+CGG + chr3.4:84953711-84953730 None:intergenic 50.0%
GGAGAGTAATTGGCAGCCAA+AGG + chr3.4:84954161-84954180 None:intergenic 50.0%
GGTACCATCAAGCTCCTTGA+GGG + chr3.4:84953928-84953947 None:intergenic 50.0%
GGTCGGAATCGAAACCCTAA+CGG + chr3.4:84952757-84952776 None:intergenic 50.0%
GTGGCATATGCACCAAAGGT+GGG + chr3.4:84954903-84954922 None:intergenic 50.0%
GTGGTTCTTCTTCTGTCCTC+AGG - chr3.4:84953713-84953732 MS.gene013480:CDS 50.0%
GTGTTCCATCGGTCGATGAT+GGG - chr3.4:84952704-84952723 MS.gene013480:CDS 50.0%
TACGAAACAAGGATCCGGAG+TGG - chr3.4:84953694-84953713 MS.gene013480:CDS 50.0%
TGGCATATGCACCAAAGGTG+GGG + chr3.4:84954902-84954921 None:intergenic 50.0%
TGGTACCATCAAGCTCCTTG+AGG + chr3.4:84953929-84953948 None:intergenic 50.0%
TGTGGCATATGCACCAAAGG+TGG + chr3.4:84954904-84954923 None:intergenic 50.0%
TGTGTTCCATCGGTCGATGA+TGG - chr3.4:84952703-84952722 MS.gene013480:CDS 50.0%
TTAACATGGGGAAGTTCGGC+TGG + chr3.4:84955065-84955084 None:intergenic 50.0%
TTCAGGAAGCAACTCGGATG+TGG - chr3.4:84955101-84955120 MS.gene013480:intron 50.0%
! TCGCATCGGTAGTGTCTGTT+TGG - chr3.4:84953002-84953021 MS.gene013480:intron 50.0%
! TGACTAACGGACACCTCACA+GGG + chr3.4:84955042-84955061 None:intergenic 50.0%
!! AACGACGGTGTTGTCGCAAA+AGG + chr3.4:84955352-84955371 None:intergenic 50.0%
!! CGATGCAAGGTACTGCTCAA+AGG - chr3.4:84955596-84955615 MS.gene013480:intron 50.0%
ACAGTGGTCGTGCACCCAAA+GGG - chr3.4:84953865-84953884 MS.gene013480:CDS 55.0%
ACCATCAAGCTCCTTGAGGG+TGG + chr3.4:84953925-84953944 None:intergenic 55.0%
AGACCACAGAGCACAGTTGG+AGG + chr3.4:84955968-84955987 None:intergenic 55.0%
CACATCACAGGTCACGGAAG+AGG - chr3.4:84954220-84954239 MS.gene013480:intron 55.0%
CACGGAAGAGGATAAGCAGC+TGG - chr3.4:84954232-84954251 MS.gene013480:intron 55.0%
CATCCGATGGAAAAGCCGTC+TGG + chr3.4:84955441-84955460 None:intergenic 55.0%
CCATCAAGCTCCTTGAGGGT+GGG + chr3.4:84953924-84953943 None:intergenic 55.0%
CTCTTCCGTGACCTGTGATG+TGG + chr3.4:84954222-84954241 None:intergenic 55.0%
CTTCCTCCAACTGTGCTCTG+TGG - chr3.4:84955962-84955981 MS.gene013480:CDS 55.0%
GCAAGCTGCTTATCCTCACG+AGG - chr3.4:84955309-84955328 MS.gene013480:intron 55.0%
GGTCGATGTGGGCTTCAGTA+TGG - chr3.4:84954958-84954977 MS.gene013480:CDS 55.0%
GTGGAATTGTAAGGAGGGCC+CGG - chr3.4:84955542-84955561 MS.gene013480:intron 55.0%
TACAGTGGTCGTGCACCCAA+AGG - chr3.4:84953864-84953883 MS.gene013480:CDS 55.0%
TCGATTCCGACCTACTGACG+AGG - chr3.4:84952765-84952784 MS.gene013480:CDS 55.0%
! ATTGTTCGTCTCGTGCTGGC+CGG + chr3.4:84955564-84955583 None:intergenic 55.0%
! GAGCTTGATGGTACCAACCC+GGG - chr3.4:84953933-84953952 MS.gene013480:intron 55.0%
! GGAGCTTGATGGTACCAACC+CGG - chr3.4:84953932-84953951 MS.gene013480:intron 55.0%
! GTGACTAACGGACACCTCAC+AGG + chr3.4:84955043-84955062 None:intergenic 55.0%
! TGAGTATCGTCCCACCCTCA+AGG - chr3.4:84953911-84953930 MS.gene013480:intron 55.0%
!! ATCGGTCGATGATGGGATGG+CGG - chr3.4:84952711-84952730 MS.gene013480:CDS 55.0%
!! TCCATCGGTCGATGATGGGA+TGG - chr3.4:84952708-84952727 MS.gene013480:CDS 55.0%
CCCACCCTCAAGGAGCTTGA+TGG - chr3.4:84953921-84953940 MS.gene013480:intron 60.0%
GCCATCCCATCATCGACCGA+TGG + chr3.4:84952712-84952731 None:intergenic 60.0%
GTCGTGCACCCAAAGGGAAG+AGG - chr3.4:84953871-84953890 MS.gene013480:CDS 60.0%
TCAACGCCTGATCCTCCTGC+AGG + chr3.4:84954822-84954841 None:intergenic 60.0%
TGATGGTACCAACCCGGGAC+AGG - chr3.4:84953938-84953957 MS.gene013480:intron 60.0%
! TTGTTCGTCTCGTGCTGGCC+GGG + chr3.4:84955563-84955582 None:intergenic 60.0%
TGGGAACCCTGGGACATGCC+TGG - chr3.4:84952871-84952890 MS.gene013480:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 84952688 84956065 84952688 ID=MS.gene013480
chr3.4 mRNA 84952688 84956065 84952688 ID=MS.gene013480.t1;Parent=MS.gene013480
chr3.4 exon 84955861 84956065 84955861 ID=MS.gene013480.t1.exon1;Parent=MS.gene013480.t1
chr3.4 CDS 84955861 84956065 84955861 ID=cds.MS.gene013480.t1;Parent=MS.gene013480.t1
chr3.4 exon 84954794 84955071 84954794 ID=MS.gene013480.t1.exon2;Parent=MS.gene013480.t1
chr3.4 CDS 84954794 84955071 84954794 ID=cds.MS.gene013480.t1;Parent=MS.gene013480.t1
chr3.4 exon 84954380 84954685 84954380 ID=MS.gene013480.t1.exon3;Parent=MS.gene013480.t1
chr3.4 CDS 84954380 84954685 84954380 ID=cds.MS.gene013480.t1;Parent=MS.gene013480.t1
chr3.4 exon 84953613 84953927 84953613 ID=MS.gene013480.t1.exon4;Parent=MS.gene013480.t1
chr3.4 CDS 84953613 84953927 84953613 ID=cds.MS.gene013480.t1;Parent=MS.gene013480.t1
chr3.4 exon 84953030 84953449 84953030 ID=MS.gene013480.t1.exon5;Parent=MS.gene013480.t1
chr3.4 CDS 84953030 84953449 84953030 ID=cds.MS.gene013480.t1;Parent=MS.gene013480.t1
chr3.4 exon 84952688 84952948 84952688 ID=MS.gene013480.t1.exon6;Parent=MS.gene013480.t1
chr3.4 CDS 84952688 84952948 84952688 ID=cds.MS.gene013480.t1;Parent=MS.gene013480.t1
Gene Sequence

>MS.gene013480

ATGGGTTCTCTTGATTGTGTTCCATCGGTCGATGATGGGATGGCGGTGTTGTCTTTGAATTCACTTCCGTTAGGGTTTCGATTCCGACCTACTGACGAGGAACTTATCGATTACTACTTACGTTCGAAGATCAATGGAAATGGTGACGAGGTTTGGGTTATCCGAGAGATTGATGTCTGTAAATGGGAACCCTGGGACATGCCTGGTATTTTTCTTTTCTTTTTTACTTTCTTCATACTCATAATTTCATCTTGATTTGGTAAAGTTGAAAATTTGTAGTTTATTCTGAATTATTTGTTTAATATTTGCATAGATCGCATCGGTAGTGTCTGTTTGGAATGAACTATTTATGTTTATTAACTGGCATAAGCACTTATCAGATTGTTTAAAAAAGTTTTTGGAAACAGCTTGTTACATGTTCATAAACCGTTTTCAGCTTATTTCCGTAAGCTTTTCTGGAGAGCATGTGAAAGCAGTTTATAGCTTATATGAAAACATCTTATAACAGTTTGACTTTATTTTATTTTATTTTGTTTTGTTATATAAATAGCTTATACACAGGCTCTGTTTGGATAAACAGCTTATAGTACGTTTATCATGATAAGCGTTTATGTATAAGCTATTTTTACAATAAAATATATAACAAAATTAAACTGTCTTCGTATATGGAAGCTGTTTTTATAAGCTATATTGCAGAACTTATGAAAATAAGCCGGTAAAAGCTTGTGAAATTTAAGTAAGCTGTTTTCATAAGTTCTCCGGAACAGTCTCACAAAACTTATGTCATAAATTCAAATAAGCCAACCCAAATAGGCCTATAACCACTTATATGATAAGCACTTGAGCTATAAATTAAATTAAGCTATTTATCCAAACAAGGCCTTGATCTGTTTTTTCTGTTTTAAGGAATAGATCATGATGTTTTGAGTAATAAATAGGAGTCTTGAATTGCTTTTCTATTTTGCTGATTTTTCATCTGTTGGGTTTGTTGTAGATTTGTCAGTGGTACGAAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCTCAGGATCGCAAGTATCCAAACGGACATCGATTGAACAGAGCAACAAATCATGGATACTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCTGGAACCATCTTGATTGGAATGAAGAAGACTTTAGTTTTCTACAGTGGTCGTGCACCCAAAGGGAAGAGGACTAATTGGGTTATGCATGAGTATCGTCCCACCCTCAAGGAGCTTGATGGTACCAACCCGGGACAGGTAAATTCTTTTCTATTCTCCTATTTTTACATCTAGCTAAGAAATTACTATAGGAATATGTTTACAATGAGTACTAAATTGTTAACTGTATTTTTTTCCTTGTATCAGAATCCATATGTCCTCTGTCGATTATTTAAGAAAAACGATGAGAGCATTGAAGTTTCAAACTGTGGTGAAGTGGAGCAAACTACTTCAGCTCCTTTGGCTGCCAATTACTCTCCAGAAGAAATACAATCCGATCCGGCTCCTATTACAGTATCCACATCACAGGTCACGGAAGAGGATAAGCAGCTGGCTGTTATCCCTGATATCTCTGAGGAAACCATATCTAATGCTGTAACCTCGGTTGATTACCATAGCGATGGATATGATGCTCATGATGTCCAAAATCAAATTGCAAAACTAGCTGCAGAGGTTAGCTTAACTGAGCTTTAATCTATAATTGCTAGTTTTTAGAGGTTGGTAATTGAAAGACATAATGTATAATACAATAATTTATTCAGTTGAGTCATTCTCATTCAGATATATTTCTTTTAGGAGAACATAATACATATTTTAAATTCAGTGTGGAGATTTATGATACTCAGTTTCCATTTTATTAGCATAAAAAACCTAGTTTTATTAGCTAAAAAAGAGAAACTAATTATGAGAATGGTAGTTTTATGTTTATGTTCAAATTATCAACATACCTCCCTCTCTGAAAATTTTGAGAGTTGAATCTGCTTAAAATATGATTAATAACATTTATAGAATTGAAGTCAATCTTATTATATGTATCATTTTTGTTTGTTTTTCTCATTCCTCTGATTTGATTTTAATTGCATTGGATTTATTAATCGAGTACTTATACTTGATATTTCCTGCAGGAGGATCAGGCGTTGAACTTTGACATGTATTATAACCCGAAAGATGGTCTATTGTTAGATGACAGATTATTCTCCCCACCTTTGGTGCATATGCCACAAGAATTTCACTATCAAGCGAACAATGAATCAGATGGTCGATGTGGGCTTCAGTATGGTACAAATGAGATAAATATTTCAGACTTTTTAAATTATGATCTTAACTGGGATCAAATTCCCTGTGAGGTGTCCGTTAGTCACCAGCCGAACTTCCCCATGTTAAATGTTAAGGACAGTGGTTCAGGAAGCAACTCGGATGTGGAAGTAGCCAATATGACTGTAAGTAACTGCTCTAACGACATTTATTGTTCGGTCAATCTTGGCAGGTTATGCCATGATAATAACACACCGTAGTTTCCTAAACTTAAGTGGCAGCTCAAACAATTAAATGTGGGCTTGTCGTGGCTCTTTTATAATGTTATATTCTCATTTTATGATGTAGGGTATGCAAGCTGCTTATCCTCACGAGGCAATTGACAGAAGGATTCCTTTTGCGACAACACCGTCGTTTAGCCACACCTTTGATTACAGTGGTGATGATCAAAAGAGCAATGTTGTTTTATTACAAAACAATTTCCAGACGGCTTTTCCATCGGATGTTAATAATACTGGTGAAGTGTACAATGCCGTCAATGGATATGAGCAACCAAGGACCTATAATACAATTATGAGCAGTGAAAGTGGAATTGTAAGGAGGGCCCGGCCAGCACGAGACGAACAATTTAAGACAAATCCGATGCAAGGTACTGCTCAAAGGAGAATTCGGTTGTCAAAGATTGAACATGTCTCATGTGGGATGGTTAAGGTTAAAGATGAGAGTTGTACACAAGAACAACATAATTCAAAACCGATTATTGCTGTGGTAAGAAAAGTTTGCTTATTTTGCTTGCTTGGCCTAGAGGTTTTCTCTGCATGTGTTGTGAGGTTTGTTTCTATTTTGCAGGAGAAGAAAGCTGCGGAAAATCATGCTTCGGATGATGAAAGTGCTATTTGTACTAATCATGCATGTAAACAGAGGAAGGTTCACAAGTCAATTGCAAATGCAAGCAAGGGGTTAAGAAATTTTTTATTGCTAGGAAGAGCACCTTTCAGATCAAAGACTTCCTCCAACTGTGCTCTGTGGTCTTCTGTTTTTGTAGTTTCTGCATCTGTGCTGGTTTCATTAGCAGCCTTTACTAACATATGGGGATATCTTAAATTTTGA
Protein sequence

>MS.gene013480.t1

MGSLDCVPSVDDGMAVLSLNSLPLGFRFRPTDEELIDYYLRSKINGNGDEVWVIREIDVCKWEPWDMPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGTILIGMKKTLVFYSGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDESIEVSNCGEVEQTTSAPLAANYSPEEIQSDPAPITVSTSQVTEEDKQLAVIPDISEETISNAVTSVDYHSDGYDAHDVQNQIAKLAAEEDQALNFDMYYNPKDGLLLDDRLFSPPLVHMPQEFHYQANNESDGRCGLQYGTNEINISDFLNYDLNWDQIPCEVSVSHQPNFPMLNVKDSGSGSNSDVEVANMTGMQAAYPHEAIDRRIPFATTPSFSHTFDYSGDDQKSNVVLLQNNFQTAFPSDVNNTGEVYNAVNGYEQPRTYNTIMSSESGIVRRARPARDEQFKTNPMQGTAQRRIRLSKIEHVSCGMVKVKDESCTQEQHNSKPIIAVEKKAAENHASDDESAICTNHACKQRKVHKSIANASKGLRNFLLLGRAPFRSKTSSNCALWSSVFVVSASVLVSLAAFTNIWGYLKF