Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013521.t1 | XP_003602338.1 | 81.1 | 571 | 77 | 6 | 1 | 571 | 1 | 540 | 5.90E-227 | 797 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013521.t1 | O81001 | 55.2 | 96 | 25 | 3 | 128 | 206 | 133 | 227 | 5.7e-21 | 104.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013521.t1 | G7J891 | 81.1 | 571 | 77 | 6 | 1 | 571 | 1 | 540 | 4.2e-227 | 797.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene013521.t1 | TF | GRF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013521.t1 | MTR_3g092330 | 89.492 | 571 | 29 | 8 | 1 | 571 | 1 | 540 | 0.0 | 923 |
| MS.gene013521.t1 | MTR_1g017490 | 52.632 | 133 | 37 | 3 | 110 | 218 | 126 | 256 | 1.95e-33 | 135 |
| MS.gene013521.t1 | MTR_1g017490 | 54.331 | 127 | 28 | 4 | 116 | 218 | 3 | 123 | 5.69e-33 | 132 |
| MS.gene013521.t1 | MTR_0001s0490 | 53.153 | 111 | 35 | 2 | 128 | 221 | 25 | 135 | 4.27e-32 | 127 |
| MS.gene013521.t1 | MTR_5g027030 | 57.000 | 100 | 35 | 2 | 126 | 218 | 14 | 112 | 8.03e-30 | 120 |
| MS.gene013521.t1 | MTR_8g020560 | 49.541 | 109 | 37 | 2 | 129 | 219 | 12 | 120 | 2.43e-29 | 119 |
| MS.gene013521.t1 | MTR_2g041430 | 50.000 | 114 | 35 | 3 | 128 | 219 | 7 | 120 | 4.70e-29 | 119 |
| MS.gene013521.t1 | MTR_2g041430 | 50.000 | 114 | 35 | 3 | 128 | 219 | 7 | 120 | 4.94e-29 | 118 |
| MS.gene013521.t1 | MTR_2g041430 | 50.000 | 114 | 35 | 3 | 128 | 219 | 7 | 120 | 5.33e-29 | 118 |
| MS.gene013521.t1 | MTR_7g104050 | 44.604 | 139 | 50 | 3 | 109 | 225 | 60 | 193 | 1.21e-28 | 117 |
| MS.gene013521.t1 | MTR_4g125490 | 49.153 | 118 | 42 | 3 | 128 | 227 | 9 | 126 | 1.23e-28 | 119 |
| MS.gene013521.t1 | MTR_7g104050 | 44.604 | 139 | 50 | 3 | 109 | 225 | 60 | 193 | 1.57e-28 | 117 |
| MS.gene013521.t1 | MTR_8g035910 | 46.218 | 119 | 51 | 3 | 127 | 233 | 48 | 165 | 4.54e-23 | 102 |
| MS.gene013521.t1 | MTR_8g035910 | 56.667 | 60 | 25 | 1 | 154 | 212 | 276 | 335 | 8.48e-14 | 73.9 |
| MS.gene013521.t1 | MTR_8g035640 | 52.542 | 59 | 27 | 1 | 155 | 212 | 31 | 89 | 1.70e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013521.t1 | AT4G37740 | 54.701 | 117 | 35 | 3 | 128 | 227 | 164 | 279 | 4.90e-33 | 133 |
| MS.gene013521.t1 | AT5G53660 | 56.140 | 114 | 46 | 2 | 126 | 235 | 57 | 170 | 1.58e-32 | 129 |
| MS.gene013521.t1 | AT2G22840 | 54.310 | 116 | 35 | 2 | 128 | 226 | 133 | 247 | 4.19e-31 | 127 |
| MS.gene013521.t1 | AT3G13960 | 51.327 | 113 | 37 | 2 | 124 | 218 | 12 | 124 | 7.45e-30 | 122 |
| MS.gene013521.t1 | AT4G24150 | 41.718 | 163 | 64 | 5 | 102 | 242 | 90 | 243 | 4.08e-29 | 120 |
| MS.gene013521.t1 | AT4G24150 | 41.718 | 163 | 64 | 5 | 102 | 242 | 128 | 281 | 7.08e-29 | 120 |
| MS.gene013521.t1 | AT2G36400 | 52.137 | 117 | 35 | 1 | 129 | 224 | 77 | 193 | 2.11e-28 | 117 |
| MS.gene013521.t1 | AT3G52910 | 49.107 | 112 | 35 | 1 | 129 | 218 | 83 | 194 | 2.95e-26 | 111 |
| MS.gene013521.t1 | AT4G24150 | 36.170 | 188 | 64 | 5 | 102 | 242 | 128 | 306 | 1.51e-25 | 110 |
| MS.gene013521.t1 | AT2G06200 | 46.610 | 118 | 34 | 3 | 128 | 216 | 45 | 162 | 1.91e-25 | 106 |
| MS.gene013521.t1 | AT2G06200 | 46.610 | 118 | 34 | 3 | 128 | 216 | 6 | 123 | 2.62e-25 | 105 |
| MS.gene013521.t1 | AT2G45480 | 44.444 | 108 | 42 | 2 | 126 | 215 | 22 | 129 | 8.66e-19 | 87.8 |
| MS.gene013521.t1 | AT2G45480 | 44.444 | 108 | 42 | 2 | 126 | 215 | 22 | 129 | 4.80e-18 | 87.4 |
| MS.gene013521.t1 | AT2G45480 | 50.000 | 74 | 32 | 3 | 154 | 227 | 289 | 357 | 2.62e-13 | 72.8 |
| MS.gene013521.t1 | AT2G45480 | 44.444 | 108 | 42 | 2 | 126 | 215 | 20 | 127 | 5.23e-18 | 87.0 |
| MS.gene013521.t1 | AT2G45480 | 50.000 | 74 | 32 | 3 | 154 | 227 | 287 | 355 | 2.71e-13 | 72.4 |
| MS.gene013521.t1 | AT2G06200 | 72.727 | 44 | 10 | 1 | 175 | 216 | 8 | 51 | 7.61e-16 | 76.3 |
Find 132 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAAAGGTTGAAAATTTA+AGG | 0.123717 | 3.4:-84476450 | None:intergenic |
| TAAACACAAACTAACCTTTA+AGG | 0.146408 | 3.4:-84476496 | None:intergenic |
| GCTTCCAACACAACCCTTAA+AGG | 0.155280 | 3.4:+84476482 | MS.gene013521:CDS |
| TCCCTTGGTGCTTCTAATTC+AGG | 0.206328 | 3.4:+84477844 | MS.gene013521:CDS |
| CTTTCACAGTACTTGTTATT+AGG | 0.229946 | 3.4:-84477129 | None:intergenic |
| GTCGAATCCATTGGCACTTC+AGG | 0.255897 | 3.4:+84478453 | MS.gene013521:CDS |
| TCAATTTGAGGCTATCAAAT+AGG | 0.264552 | 3.4:+84477031 | MS.gene013521:CDS |
| ACAACATACAACATGTCTTT+TGG | 0.266442 | 3.4:+84476374 | MS.gene013521:CDS |
| AATCCAACTACAAGAAAATA+TGG | 0.279540 | 3.4:+84477306 | MS.gene013521:CDS |
| TTAGAAGCACCAAGGGAAAT+TGG | 0.300986 | 3.4:-84477838 | None:intergenic |
| AACCTCTTGGTTTCTCAGAT+TGG | 0.311180 | 3.4:-84478044 | None:intergenic |
| GGTGGTGGTGGTGGAGGTGT+TGG | 0.317549 | 3.4:-84478142 | None:intergenic |
| GCCCTTGATGATGCAACATT+TGG | 0.323926 | 3.4:-84478558 | None:intergenic |
| TATGATTTACAAGTACTTGA+TGG | 0.325776 | 3.4:+84476716 | MS.gene013521:CDS |
| GTGGAAATGAATTCAGATAC+TGG | 0.360987 | 3.4:-84477939 | None:intergenic |
| AAACACAAACTAACCTTTAA+GGG | 0.361293 | 3.4:-84476495 | None:intergenic |
| ACTACTAGTGTTATTGTTGT+TGG | 0.363306 | 3.4:-84476204 | None:intergenic |
| TTCCACAGGCTTTCTTGAAC+GGG | 0.370446 | 3.4:-84477172 | None:intergenic |
| GTTGGAGGTGGTGGTGGTGG+TGG | 0.370812 | 3.4:-84478151 | None:intergenic |
| GTCCACTAGCTGAAGTTCTA+AGG | 0.379508 | 3.4:+84478358 | MS.gene013521:CDS |
| ATGATTAAACTTATTGAGTA+AGG | 0.386331 | 3.4:-84478595 | None:intergenic |
| GCTAATGCTATCATTGATAA+TGG | 0.393717 | 3.4:+84476419 | MS.gene013521:CDS |
| ATGGCGGCTTCAATAGGAAT+AGG | 0.401179 | 3.4:+84476645 | MS.gene013521:CDS |
| GCTGTTGATGCTGATGGTTA+TGG | 0.403679 | 3.4:+84476347 | MS.gene013521:CDS |
| TTCATCACTTGATCTATCAA+TGG | 0.407184 | 3.4:+84478206 | MS.gene013521:CDS |
| GGATTCAGTGTTATTATGAT+AGG | 0.409147 | 3.4:-84477917 | None:intergenic |
| ATAGTCATCATCAAATCAAA+AGG | 0.419333 | 3.4:+84477223 | MS.gene013521:CDS |
| ATTGTTGGAGGTGGTGGTGG+TGG | 0.424063 | 3.4:-84478154 | None:intergenic |
| TTTGCATAATAGCAGCTTTG+AGG | 0.429903 | 3.4:+84477389 | MS.gene013521:CDS |
| CTTCTGCACCTACCAGCCTC+TGG | 0.433695 | 3.4:-84477066 | None:intergenic |
| GGTGGAATGGCGGCTTCAAT+AGG | 0.433909 | 3.4:+84476639 | MS.gene013521:CDS |
| ACCATTGTTGGAGGTGGTGG+TGG | 0.435162 | 3.4:-84478157 | None:intergenic |
| GAAAATGAAGATTGGAGATA+AGG | 0.436913 | 3.4:-84477366 | None:intergenic |
| TGGATGGTGGTTTCAATTTG+AGG | 0.446579 | 3.4:+84477019 | MS.gene013521:CDS |
| CTCCTTTCACAATTGCTCAA+TGG | 0.446940 | 3.4:+84476673 | MS.gene013521:CDS |
| GGATTAAGTAAGAGAGGAAA+GGG | 0.448727 | 3.4:-84477997 | None:intergenic |
| TCTGCTGCTGTTGATGCTGA+TGG | 0.451525 | 3.4:+84476341 | MS.gene013521:CDS |
| GAAGCAGAAATGTTATGAAA+AGG | 0.454915 | 3.4:-84476464 | None:intergenic |
| CTGATGCATAACAACAAACT+TGG | 0.457493 | 3.4:+84477877 | MS.gene013521:CDS |
| TCCATGAAACTAAAACCTCT+TGG | 0.459912 | 3.4:-84478057 | None:intergenic |
| TATGCAAAGAAAATGAAGAT+TGG | 0.460286 | 3.4:-84477374 | None:intergenic |
| GGCTCAATCCAGCACAACCT+TGG | 0.462541 | 3.4:+84478316 | MS.gene013521:CDS |
| AACTGATGCAGAACCATTGT+TGG | 0.462885 | 3.4:-84478169 | None:intergenic |
| GAAAGAAGATGAGAAGGAAC+AGG | 0.467897 | 3.4:-84476747 | None:intergenic |
| TCATCACTTGATCTATCAAT+GGG | 0.468999 | 3.4:+84478207 | MS.gene013521:CDS |
| TCCATTGGCACTTCAGGGAC+AGG | 0.476778 | 3.4:+84478459 | MS.gene013521:CDS |
| AAGATTGGAGATAAGGATGA+AGG | 0.477847 | 3.4:-84477359 | None:intergenic |
| AATAACACTAGTAGTGTTGT+TGG | 0.478175 | 3.4:+84476212 | MS.gene013521:CDS |
| CTAACCTTTAAGGGTTGTGT+TGG | 0.481457 | 3.4:-84476486 | None:intergenic |
| GGAACAGCCACAGTAAAATC+AGG | 0.486638 | 3.4:-84477279 | None:intergenic |
| GCTCAATCCAGCACAACCTT+GGG | 0.488726 | 3.4:+84478317 | MS.gene013521:CDS |
| AGTTCAGAACTGTTATATAG+TGG | 0.490372 | 3.4:-84477958 | None:intergenic |
| TGATAGATCAAGTGATGAAA+GGG | 0.490826 | 3.4:-84478202 | None:intergenic |
| TCAATGAAACTAAAACCTCT+TGG | 0.493104 | 3.4:-84478084 | None:intergenic |
| GAGATAAGGATGAAGGGGAG+TGG | 0.496353 | 3.4:-84477352 | None:intergenic |
| GTCCAAATGTTGCATCATCA+AGG | 0.496502 | 3.4:+84478556 | MS.gene013521:CDS |
| AGATTGGAGATAAGGATGAA+GGG | 0.498515 | 3.4:-84477358 | None:intergenic |
| TTATTTGTGTGAAGTTCCAC+AGG | 0.498667 | 3.4:-84477186 | None:intergenic |
| TCGAATCCATTGGCACTTCA+GGG | 0.500942 | 3.4:+84478454 | MS.gene013521:CDS |
| AGAACCATTGTTGGAGGTGG+TGG | 0.506509 | 3.4:-84478160 | None:intergenic |
| GTTCCACAGGCTTTCTTGAA+CGG | 0.508728 | 3.4:-84477173 | None:intergenic |
| TTTCTTGTAGTTGGATTAGG+AGG | 0.509981 | 3.4:-84477300 | None:intergenic |
| GGCTTGGAGTGGATGCTGAA+TGG | 0.510711 | 3.4:+84477811 | MS.gene013521:CDS |
| CTGATGGAAGTAACATTGCT+TGG | 0.510713 | 3.4:-84478381 | None:intergenic |
| GATTGGAGATAAGGATGAAG+GGG | 0.516351 | 3.4:-84477357 | None:intergenic |
| GAACCTACCCAAGGTTGTGC+TGG | 0.517275 | 3.4:-84478324 | None:intergenic |
| TGGCGGCTTCAATAGGAATA+GGG | 0.523564 | 3.4:+84476646 | MS.gene013521:CDS |
| TCCTGTCCCTGAAGTGCCAA+TGG | 0.523915 | 3.4:-84478460 | None:intergenic |
| TCAGATTGGAGAGTTTGCAT+TGG | 0.524106 | 3.4:-84478030 | None:intergenic |
| GAATTGAATGAAAAGGGGCT+TGG | 0.524945 | 3.4:+84477795 | MS.gene013521:intron |
| CACTAGTAGTGTTGTTGGGT+CGG | 0.525074 | 3.4:+84476217 | MS.gene013521:CDS |
| TTATTATGCAAAACACCAGA+TGG | 0.531239 | 3.4:-84478495 | None:intergenic |
| GGGATTAAGTAAGAGAGGAA+AGG | 0.533228 | 3.4:-84477998 | None:intergenic |
| GGCCTTAGAACTTCAGCTAG+TGG | 0.534033 | 3.4:-84478360 | None:intergenic |
| TTGATAGATCAAGTGATGAA+AGG | 0.535432 | 3.4:-84478203 | None:intergenic |
| AGAATTTGTTGCATCACTGA+TGG | 0.536310 | 3.4:-84478397 | None:intergenic |
| CTAAACTAGCATTCTCAAGT+TGG | 0.538122 | 3.4:+84478295 | MS.gene013521:CDS |
| AATGGAGATCCAATTTCCCT+TGG | 0.538520 | 3.4:+84477829 | MS.gene013521:CDS |
| CTCCATTGAGCAATTGTGAA+AGG | 0.540021 | 3.4:-84476675 | None:intergenic |
| GGAATGGTATCATCCCCATC+TGG | 0.541169 | 3.4:+84478480 | MS.gene013521:CDS |
| ATTATGATAGGAACTTCCAT+TGG | 0.546307 | 3.4:-84477905 | None:intergenic |
| TATTATGCAAAACACCAGAT+GGG | 0.548408 | 3.4:-84478494 | None:intergenic |
| ACCACCACCACCTCCAACAA+TGG | 0.549376 | 3.4:+84478156 | MS.gene013521:CDS |
| ATACATGAAAGAAGATGAGA+AGG | 0.554354 | 3.4:-84476753 | None:intergenic |
| GGTGGTCACAGCAGGTGGAA+TGG | 0.556637 | 3.4:+84476626 | MS.gene013521:intron |
| AACAATGGTTCTGCATCAGT+TGG | 0.557664 | 3.4:+84478171 | MS.gene013521:CDS |
| AAAGACATGTTGTATGTTGT+GGG | 0.561732 | 3.4:-84476371 | None:intergenic |
| AAAAGACATGTTGTATGTTG+TGG | 0.562174 | 3.4:-84476372 | None:intergenic |
| AACAATACTGATCCAGAGGC+TGG | 0.566845 | 3.4:+84477054 | MS.gene013521:CDS |
| TGAGTTTCGCGTTCAAGACA+AGG | 0.567509 | 3.4:+84476166 | MS.gene013521:CDS |
| ACAAATCGTGTCGAATCCAT+TGG | 0.573702 | 3.4:+84478444 | MS.gene013521:CDS |
| GTTTGTTGTTATGCATCAGA+GGG | 0.575473 | 3.4:-84477873 | None:intergenic |
| ATAACACTAGTAGTGTTGTT+GGG | 0.575929 | 3.4:+84476213 | MS.gene013521:CDS |
| AACAAACTTGGAATGACCAA+TGG | 0.577256 | 3.4:+84477889 | MS.gene013521:CDS |
| TAGTCATCATCAAATCAAAA+GGG | 0.580379 | 3.4:+84477224 | MS.gene013521:CDS |
| CATGATTATCAAAGAATGAA+CGG | 0.581245 | 3.4:-84476304 | None:intergenic |
| AGTTTGTTGTTATGCATCAG+AGG | 0.584443 | 3.4:-84477874 | None:intergenic |
| ATTATGCAAAACACCAGATG+GGG | 0.585397 | 3.4:-84478493 | None:intergenic |
| TGCAGAACCATTGTTGGAGG+TGG | 0.586637 | 3.4:-84478163 | None:intergenic |
| TCCTGAATTAGAAGCACCAA+GGG | 0.587527 | 3.4:-84477845 | None:intergenic |
| GAGTTTGCATTGGAACAACA+AGG | 0.591725 | 3.4:-84478020 | None:intergenic |
| ATACTGATCCAGAGGCTGGT+AGG | 0.593096 | 3.4:+84477058 | MS.gene013521:CDS |
| ACACGATTTGTTGTTGTGAG+AGG | 0.596043 | 3.4:-84478432 | None:intergenic |
| TTGGTGCTTCTAATTCAGGA+TGG | 0.601100 | 3.4:+84477848 | MS.gene013521:CDS |
| TGGAAATGAATTCAGATACT+GGG | 0.603286 | 3.4:-84477938 | None:intergenic |
| ACAAGGGGATTAAGTAAGAG+AGG | 0.605379 | 3.4:-84478003 | None:intergenic |
| GTTTGCATTGGAACAACAAG+GGG | 0.608134 | 3.4:-84478018 | None:intergenic |
| CCTTGGGTAGGTTCAACACC+TGG | 0.615728 | 3.4:+84478333 | MS.gene013521:CDS |
| TCCCCGTTCAAGAAAGCCTG+TGG | 0.619148 | 3.4:+84477170 | MS.gene013521:CDS |
| GGTAGGTGCAGAAGAACAGA+TGG | 0.619651 | 3.4:+84477075 | MS.gene013521:CDS |
| GGTCACAGCAGGTGGAATGG+CGG | 0.620189 | 3.4:+84476629 | MS.gene013521:intron |
| TCCAAATGTTGCATCATCAA+GGG | 0.620644 | 3.4:+84478557 | MS.gene013521:CDS |
| CTCCAATCTGAGAAACCAAG+AGG | 0.625201 | 3.4:+84478042 | MS.gene013521:CDS |
| GAATGAAAAGGGGCTTGGAG+TGG | 0.630089 | 3.4:+84477800 | MS.gene013521:intron |
| TGGCACTTCAGGGACAGGAA+TGG | 0.631431 | 3.4:+84478464 | MS.gene013521:CDS |
| ACTTCAGCTAGTGGACCACC+AGG | 0.635831 | 3.4:-84478351 | None:intergenic |
| TCCACAGGCTTTCTTGAACG+GGG | 0.635923 | 3.4:-84477171 | None:intergenic |
| AGGCTTCAAATAAGCAACCA+AGG | 0.637520 | 3.4:+84477409 | MS.gene013521:CDS |
| TAGGAACAATACTGATCCAG+AGG | 0.641405 | 3.4:+84477050 | MS.gene013521:CDS |
| TGATGCAGAACCATTGTTGG+AGG | 0.644016 | 3.4:-84478166 | None:intergenic |
| CATTGAGCAATTGTGAAAGG+AGG | 0.644246 | 3.4:-84476672 | None:intergenic |
| AATCCAGCACAACCTTGGGT+AGG | 0.661395 | 3.4:+84478321 | MS.gene013521:CDS |
| AGTTTGCATTGGAACAACAA+GGG | 0.661506 | 3.4:-84478019 | None:intergenic |
| CCAGGTGTTGAACCTACCCA+AGG | 0.666817 | 3.4:-84478333 | None:intergenic |
| ATCCTGAATTAGAAGCACCA+AGG | 0.673204 | 3.4:-84477846 | None:intergenic |
| AGTTTCATGGAGAAACCAAG+AGG | 0.677284 | 3.4:+84478069 | MS.gene013521:CDS |
| TCACTTGATCTATCAATGGG+AGG | 0.680795 | 3.4:+84478210 | MS.gene013521:CDS |
| TTGGTCTAATGCAGAGACAG+TGG | 0.682367 | 3.4:+84478110 | MS.gene013521:CDS |
| TGGGTAGGTTCAACACCTGG+TGG | 0.687244 | 3.4:+84478336 | MS.gene013521:CDS |
| TGTGAAAGACATATGCATAG+AGG | 0.723539 | 3.4:+84477144 | MS.gene013521:CDS |
| GATTATCAAAGAATGAACGG+TGG | 0.727234 | 3.4:-84476301 | None:intergenic |
| AATGCTATCATTGATAATGG+CGG | 0.749635 | 3.4:+84476422 | MS.gene013521:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAATATGAAATTAATTA+AGG | - | chr3.4:84476803-84476822 | None:intergenic | 10.0% |
| !! | ATATATAGAAAAATAAGTAG+TGG | + | chr3.4:84476536-84476555 | MS.gene013521:intron | 15.0% |
| !!! | AAAAAAAATCAAGCTTTATT+TGG | - | chr3.4:84477689-84477708 | None:intergenic | 15.0% |
| !!! | TAAATAAATGCATTGTTTTA+TGG | + | chr3.4:84477730-84477749 | MS.gene013521:intron | 15.0% |
| !! | ATGAAAAGGTTGAAAATTTA+AGG | - | chr3.4:84476453-84476472 | None:intergenic | 20.0% |
| !! | ATGATTAAACTTATTGAGTA+AGG | - | chr3.4:84478598-84478617 | None:intergenic | 20.0% |
| !!! | TTTCATGTTTTGTTTTGATT+TGG | + | chr3.4:84477653-84477672 | MS.gene013521:intron | 20.0% |
| !!! | TTTCTAGTTTGTTATTGATT+TGG | + | chr3.4:84477771-84477790 | MS.gene013521:intron | 20.0% |
| ! | AAAAAAGCAGAAAAAGTTGA+TGG | - | chr3.4:84476852-84476871 | None:intergenic | 25.0% |
| ! | AAACACAAACTAACCTTTAA+GGG | - | chr3.4:84476498-84476517 | None:intergenic | 25.0% |
| ! | AAGGTAAATAGAATGAAAAG+TGG | - | chr3.4:84476908-84476927 | None:intergenic | 25.0% |
| ! | AATCCAACTACAAGAAAATA+TGG | + | chr3.4:84477306-84477325 | MS.gene013521:CDS | 25.0% |
| ! | ACAAAACATGAAAGTGAATA+AGG | - | chr3.4:84477646-84477665 | None:intergenic | 25.0% |
| ! | ATAGTCATCATCAAATCAAA+AGG | + | chr3.4:84477223-84477242 | MS.gene013521:CDS | 25.0% |
| ! | ATATTGAGTTTGACTAAATC+AGG | + | chr3.4:84477485-84477504 | MS.gene013521:intron | 25.0% |
| ! | CATGATTATCAAAGAATGAA+CGG | - | chr3.4:84476307-84476326 | None:intergenic | 25.0% |
| ! | TAAACACAAACTAACCTTTA+AGG | - | chr3.4:84476499-84476518 | None:intergenic | 25.0% |
| ! | TAGTCATCATCAAATCAAAA+GGG | + | chr3.4:84477224-84477243 | MS.gene013521:CDS | 25.0% |
| ! | TATGATTTACAAGTACTTGA+TGG | + | chr3.4:84476716-84476735 | MS.gene013521:CDS | 25.0% |
| ! | TATGCAAAGAAAATGAAGAT+TGG | - | chr3.4:84477377-84477396 | None:intergenic | 25.0% |
| ! | TTTAAGAGTGAATTTCATAG+AGG | - | chr3.4:84477714-84477733 | None:intergenic | 25.0% |
| ! | TTTGGTGAATTGAATGAAAA+GGG | + | chr3.4:84477789-84477808 | MS.gene013521:intron | 25.0% |
| !! | AAAAAGCAGAAAAAGTTGAT+GGG | - | chr3.4:84476851-84476870 | None:intergenic | 25.0% |
| !! | ATTTGGTGAATTGAATGAAA+AGG | + | chr3.4:84477788-84477807 | MS.gene013521:intron | 25.0% |
| !! | TATTTTCTTGTAGTTGGATT+AGG | - | chr3.4:84477306-84477325 | None:intergenic | 25.0% |
| !!! | GTTTTATGGTGTTAGTATTA+TGG | + | chr3.4:84477744-84477763 | MS.gene013521:intron | 25.0% |
| !!! | TACAAACTTTTGACTCAAAA+TGG | - | chr3.4:84476879-84476898 | None:intergenic | 25.0% |
| !!! | TGTCTTTGTTTGTTTTGATT+TGG | + | chr3.4:84477615-84477634 | MS.gene013521:intron | 25.0% |
| !!! | TTGTTGTTGGTTTTTTTTGT+AGG | - | chr3.4:84476194-84476213 | None:intergenic | 25.0% |
| AAAAGACATGTTGTATGTTG+TGG | - | chr3.4:84476375-84476394 | None:intergenic | 30.0% | |
| AAAGACATGTTGTATGTTGT+GGG | - | chr3.4:84476374-84476393 | None:intergenic | 30.0% | |
| AAAGCAACACATGATGAAAA+AGG | - | chr3.4:84476953-84476972 | None:intergenic | 30.0% | |
| AATAACACTAGTAGTGTTGT+TGG | + | chr3.4:84476212-84476231 | MS.gene013521:CDS | 30.0% | |
| ACAAAGACATAGTACATGTT+TGG | - | chr3.4:84477604-84477623 | None:intergenic | 30.0% | |
| AGTTCAGAACTGTTATATAG+TGG | - | chr3.4:84477961-84477980 | None:intergenic | 30.0% | |
| ATACAGATATAAACTCACCT+TGG | - | chr3.4:84477429-84477448 | None:intergenic | 30.0% | |
| ATACATGAAAGAAGATGAGA+AGG | - | chr3.4:84476756-84476775 | None:intergenic | 30.0% | |
| ATTAAGGAAGAAGAGAGAAA+AGG | - | chr3.4:84476787-84476806 | None:intergenic | 30.0% | |
| ATTATGATAGGAACTTCCAT+TGG | - | chr3.4:84477908-84477927 | None:intergenic | 30.0% | |
| GAAAATGAAGATTGGAGATA+AGG | - | chr3.4:84477369-84477388 | None:intergenic | 30.0% | |
| GAAGAACAGATGGTAAAAAA+TGG | + | chr3.4:84477085-84477104 | MS.gene013521:CDS | 30.0% | |
| GAAGCAGAAATGTTATGAAA+AGG | - | chr3.4:84476467-84476486 | None:intergenic | 30.0% | |
| GCTAATGCTATCATTGATAA+TGG | + | chr3.4:84476419-84476438 | MS.gene013521:CDS | 30.0% | |
| TATTATGCAAAACACCAGAT+GGG | - | chr3.4:84478497-84478516 | None:intergenic | 30.0% | |
| TCAATGAAACTAAAACCTCT+TGG | - | chr3.4:84478087-84478106 | None:intergenic | 30.0% | |
| TCATCACTTGATCTATCAAT+GGG | + | chr3.4:84478207-84478226 | MS.gene013521:CDS | 30.0% | |
| TGATAGATCAAGTGATGAAA+GGG | - | chr3.4:84478205-84478224 | None:intergenic | 30.0% | |
| TGGAAATGAATTCAGATACT+GGG | - | chr3.4:84477941-84477960 | None:intergenic | 30.0% | |
| TTAAGGAAGAAGAGAGAAAA+GGG | - | chr3.4:84476786-84476805 | None:intergenic | 30.0% | |
| TTATTATGCAAAACACCAGA+TGG | - | chr3.4:84478498-84478517 | None:intergenic | 30.0% | |
| TTCATCACTTGATCTATCAA+TGG | + | chr3.4:84478206-84478225 | MS.gene013521:CDS | 30.0% | |
| TTGATAGATCAAGTGATGAA+AGG | - | chr3.4:84478206-84478225 | None:intergenic | 30.0% | |
| TTGGTGAATTGAATGAAAAG+GGG | + | chr3.4:84477790-84477809 | MS.gene013521:intron | 30.0% | |
| TTTGTCATTGAATCAATGTG+TGG | + | chr3.4:84476927-84476946 | MS.gene013521:intron | 30.0% | |
| ! | AACATACAACATGTCTTTTG+GGG | + | chr3.4:84476376-84476395 | MS.gene013521:CDS | 30.0% |
| ! | ACAACATACAACATGTCTTT+TGG | + | chr3.4:84476374-84476393 | MS.gene013521:CDS | 30.0% |
| ! | ACTACTAGTGTTATTGTTGT+TGG | - | chr3.4:84476207-84476226 | None:intergenic | 30.0% |
| ! | ATAACACTAGTAGTGTTGTT+GGG | + | chr3.4:84476213-84476232 | MS.gene013521:CDS | 30.0% |
| ! | CAACATACAACATGTCTTTT+GGG | + | chr3.4:84476375-84476394 | MS.gene013521:CDS | 30.0% |
| ! | GATCCATATTTTCTTGTAGT+TGG | - | chr3.4:84477312-84477331 | None:intergenic | 30.0% |
| ! | GGATTCAGTGTTATTATGAT+AGG | - | chr3.4:84477920-84477939 | None:intergenic | 30.0% |
| ! | TCAATTTGAGGCTATCAAAT+AGG | + | chr3.4:84477031-84477050 | MS.gene013521:CDS | 30.0% |
| ! | TGATTTTGTTGAATCCCTTA+AGG | + | chr3.4:84477517-84477536 | MS.gene013521:intron | 30.0% |
| !! | AATGCTATCATTGATAATGG+CGG | + | chr3.4:84476422-84476441 | MS.gene013521:CDS | 30.0% |
| !! | CACATTGATTCAATGACAAA+AGG | - | chr3.4:84476927-84476946 | None:intergenic | 30.0% |
| !! | CTTTCACAGTACTTGTTATT+AGG | - | chr3.4:84477132-84477151 | None:intergenic | 30.0% |
| !!! | GTTTTAGTTTCATTGATGCT+TGG | + | chr3.4:84478091-84478110 | MS.gene013521:CDS | 30.0% |
| AACAAACTTGGAATGACCAA+TGG | + | chr3.4:84477889-84477908 | MS.gene013521:CDS | 35.0% | |
| AAGATTGGAGATAAGGATGA+AGG | - | chr3.4:84477362-84477381 | None:intergenic | 35.0% | |
| AGATTGGAGATAAGGATGAA+GGG | - | chr3.4:84477361-84477380 | None:intergenic | 35.0% | |
| AGTTTGCATTGGAACAACAA+GGG | - | chr3.4:84478022-84478041 | None:intergenic | 35.0% | |
| ATTATGCAAAACACCAGATG+GGG | - | chr3.4:84478496-84478515 | None:intergenic | 35.0% | |
| CTAAACTAGCATTCTCAAGT+TGG | + | chr3.4:84478295-84478314 | MS.gene013521:CDS | 35.0% | |
| CTGATGCATAACAACAAACT+TGG | + | chr3.4:84477877-84477896 | MS.gene013521:CDS | 35.0% | |
| GATTATCAAAGAATGAACGG+TGG | - | chr3.4:84476304-84476323 | None:intergenic | 35.0% | |
| GGATTAAGTAAGAGAGGAAA+GGG | - | chr3.4:84478000-84478019 | None:intergenic | 35.0% | |
| GGGATTCAACAAAATCACAA+TGG | - | chr3.4:84477514-84477533 | None:intergenic | 35.0% | |
| GTGGAAATGAATTCAGATAC+TGG | - | chr3.4:84477942-84477961 | None:intergenic | 35.0% | |
| TACTTGTGTTTGTGTGTTTG+TGG | + | chr3.4:84476605-84476624 | MS.gene013521:intron | 35.0% | |
| TCCAAATGTTGCATCATCAA+GGG | + | chr3.4:84478557-84478576 | MS.gene013521:CDS | 35.0% | |
| TCCATGAAACTAAAACCTCT+TGG | - | chr3.4:84478060-84478079 | None:intergenic | 35.0% | |
| TGTGAAAGACATATGCATAG+AGG | + | chr3.4:84477144-84477163 | MS.gene013521:CDS | 35.0% | |
| TTATTTGTGTGAAGTTCCAC+AGG | - | chr3.4:84477189-84477208 | None:intergenic | 35.0% | |
| TTTGCATAATAGCAGCTTTG+AGG | + | chr3.4:84477389-84477408 | MS.gene013521:CDS | 35.0% | |
| ! | ACATACAACATGTCTTTTGG+GGG | + | chr3.4:84476377-84476396 | MS.gene013521:CDS | 35.0% |
| ! | GCTTCATTTTCTGATAGTAG+TGG | + | chr3.4:84478525-84478544 | MS.gene013521:CDS | 35.0% |
| ! | TTTCTTGTAGTTGGATTAGG+AGG | - | chr3.4:84477303-84477322 | None:intergenic | 35.0% |
| !! | AGAATTTGTTGCATCACTGA+TGG | - | chr3.4:84478400-84478419 | None:intergenic | 35.0% |
| !! | AGTTTGTTGTTATGCATCAG+AGG | - | chr3.4:84477877-84477896 | None:intergenic | 35.0% |
| !! | GTTTGTTGTTATGCATCAGA+GGG | - | chr3.4:84477876-84477895 | None:intergenic | 35.0% |
| !!! | ACCAAGAGGTTTTAGTTTCA+TGG | + | chr3.4:84478056-84478075 | MS.gene013521:CDS | 35.0% |
| !!! | TATCCTTGTTTTTGAAGCAG+TGG | + | chr3.4:84476999-84477018 | MS.gene013521:intron | 35.0% |
| AACCTCTTGGTTTCTCAGAT+TGG | - | chr3.4:84478047-84478066 | None:intergenic | 40.0% | |
| AACTGATGCAGAACCATTGT+TGG | - | chr3.4:84478172-84478191 | None:intergenic | 40.0% | |
| AATGGAGATCCAATTTCCCT+TGG | + | chr3.4:84477829-84477848 | MS.gene013521:CDS | 40.0% | |
| ACAAATCGTGTCGAATCCAT+TGG | + | chr3.4:84478444-84478463 | MS.gene013521:CDS | 40.0% | |
| ACAAGGGGATTAAGTAAGAG+AGG | - | chr3.4:84478006-84478025 | None:intergenic | 40.0% | |
| AGGCTTCAAATAAGCAACCA+AGG | + | chr3.4:84477409-84477428 | MS.gene013521:CDS | 40.0% | |
| AGTTTCATGGAGAAACCAAG+AGG | + | chr3.4:84478069-84478088 | MS.gene013521:CDS | 40.0% | |
| CATCCACTGCTTCAAAAACA+AGG | - | chr3.4:84477005-84477024 | None:intergenic | 40.0% | |
| CATTGAGCAATTGTGAAAGG+AGG | - | chr3.4:84476675-84476694 | None:intergenic | 40.0% | |
| CTCCATTGAGCAATTGTGAA+AGG | - | chr3.4:84476678-84476697 | None:intergenic | 40.0% | |
| CTCCTTTCACAATTGCTCAA+TGG | + | chr3.4:84476673-84476692 | MS.gene013521:CDS | 40.0% | |
| CTGATGGAAGTAACATTGCT+TGG | - | chr3.4:84478384-84478403 | None:intergenic | 40.0% | |
| GAAAGAAGATGAGAAGGAAC+AGG | - | chr3.4:84476750-84476769 | None:intergenic | 40.0% | |
| GAATTGAATGAAAAGGGGCT+TGG | + | chr3.4:84477795-84477814 | MS.gene013521:intron | 40.0% | |
| GAGTTTGCATTGGAACAACA+AGG | - | chr3.4:84478023-84478042 | None:intergenic | 40.0% | |
| GATTGGAGATAAGGATGAAG+GGG | - | chr3.4:84477360-84477379 | None:intergenic | 40.0% | |
| GGGATTAAGTAAGAGAGGAA+AGG | - | chr3.4:84478001-84478020 | None:intergenic | 40.0% | |
| GTCCAAATGTTGCATCATCA+AGG | + | chr3.4:84478556-84478575 | MS.gene013521:CDS | 40.0% | |
| GTTTGCATTGGAACAACAAG+GGG | - | chr3.4:84478021-84478040 | None:intergenic | 40.0% | |
| TAGGAACAATACTGATCCAG+AGG | + | chr3.4:84477050-84477069 | MS.gene013521:CDS | 40.0% | |
| TCACTTGATCTATCAATGGG+AGG | + | chr3.4:84478210-84478229 | MS.gene013521:CDS | 40.0% | |
| TCAGAAGATCCAAGCCTTAA+GGG | - | chr3.4:84477534-84477553 | None:intergenic | 40.0% | |
| TCAGATTGGAGAGTTTGCAT+TGG | - | chr3.4:84478033-84478052 | None:intergenic | 40.0% | |
| TTGTGTTTGTGTGTTTGTGG+TGG | + | chr3.4:84476608-84476627 | MS.gene013521:intron | 40.0% | |
| TTGTTGAATCCCTTAAGGCT+TGG | + | chr3.4:84477522-84477541 | MS.gene013521:intron | 40.0% | |
| ! | AACAATGGTTCTGCATCAGT+TGG | + | chr3.4:84478171-84478190 | MS.gene013521:CDS | 40.0% |
| ! | CTAACCTTTAAGGGTTGTGT+TGG | - | chr3.4:84476489-84476508 | None:intergenic | 40.0% |
| ! | TGGATGGTGGTTTCAATTTG+AGG | + | chr3.4:84477019-84477038 | MS.gene013521:CDS | 40.0% |
| ! | TTCTCTGCCTGATTTTACTG+TGG | + | chr3.4:84477272-84477291 | MS.gene013521:CDS | 40.0% |
| ! | TTGGTGCTTCTAATTCAGGA+TGG | + | chr3.4:84477848-84477867 | MS.gene013521:CDS | 40.0% |
| !! | ACACGATTTGTTGTTGTGAG+AGG | - | chr3.4:84478435-84478454 | None:intergenic | 40.0% |
| !! | ATCCTGAATTAGAAGCACCA+AGG | - | chr3.4:84477849-84477868 | None:intergenic | 40.0% |
| !! | TCCTGAATTAGAAGCACCAA+GGG | - | chr3.4:84477848-84477867 | None:intergenic | 40.0% |
| !! | TTAGAAGCACCAAGGGAAAT+TGG | - | chr3.4:84477841-84477860 | None:intergenic | 40.0% |
| !!! | CTTGTTTTTGAAGCAGTGGA+TGG | + | chr3.4:84477003-84477022 | MS.gene013521:intron | 40.0% |
| AACAATACTGATCCAGAGGC+TGG | + | chr3.4:84477054-84477073 | MS.gene013521:CDS | 45.0% | |
| ATGGCGGCTTCAATAGGAAT+AGG | + | chr3.4:84476645-84476664 | MS.gene013521:CDS | 45.0% | |
| CTCAGAAGATCCAAGCCTTA+AGG | - | chr3.4:84477535-84477554 | None:intergenic | 45.0% | |
| CTCCAATCTGAGAAACCAAG+AGG | + | chr3.4:84478042-84478061 | MS.gene013521:CDS | 45.0% | |
| GCTGTTGATGCTGATGGTTA+TGG | + | chr3.4:84476347-84476366 | MS.gene013521:CDS | 45.0% | |
| GCTTCCAACACAACCCTTAA+AGG | + | chr3.4:84476482-84476501 | MS.gene013521:CDS | 45.0% | |
| GGAACAGCCACAGTAAAATC+AGG | - | chr3.4:84477282-84477301 | None:intergenic | 45.0% | |
| GTCCACTAGCTGAAGTTCTA+AGG | + | chr3.4:84478358-84478377 | MS.gene013521:CDS | 45.0% | |
| GTTCCACAGGCTTTCTTGAA+CGG | - | chr3.4:84477176-84477195 | None:intergenic | 45.0% | |
| TCGAATCCATTGGCACTTCA+GGG | + | chr3.4:84478454-84478473 | MS.gene013521:CDS | 45.0% | |
| TGAGTTTCGCGTTCAAGACA+AGG | + | chr3.4:84476166-84476185 | MS.gene013521:CDS | 45.0% | |
| TGATGCAGAACCATTGTTGG+AGG | - | chr3.4:84478169-84478188 | None:intergenic | 45.0% | |
| TGGCGGCTTCAATAGGAATA+GGG | + | chr3.4:84476646-84476665 | MS.gene013521:CDS | 45.0% | |
| TTCCACAGGCTTTCTTGAAC+GGG | - | chr3.4:84477175-84477194 | None:intergenic | 45.0% | |
| TTGGTCTAATGCAGAGACAG+TGG | + | chr3.4:84478110-84478129 | MS.gene013521:CDS | 45.0% | |
| ! | CACTAGTAGTGTTGTTGGGT+CGG | + | chr3.4:84476217-84476236 | MS.gene013521:CDS | 45.0% |
| !! | GCCCTTGATGATGCAACATT+TGG | - | chr3.4:84478561-84478580 | None:intergenic | 45.0% |
| !! | TCCCTTGGTGCTTCTAATTC+AGG | + | chr3.4:84477844-84477863 | MS.gene013521:CDS | 45.0% |
| !!! | GTTTTTGAAGCAGTGGATGG+TGG | + | chr3.4:84477006-84477025 | MS.gene013521:intron | 45.0% |
| AATCCAGCACAACCTTGGGT+AGG | + | chr3.4:84478321-84478340 | MS.gene013521:CDS | 50.0% | |
| AGAACCATTGTTGGAGGTGG+TGG | - | chr3.4:84478163-84478182 | None:intergenic | 50.0% | |
| ATACTGATCCAGAGGCTGGT+AGG | + | chr3.4:84477058-84477077 | MS.gene013521:CDS | 50.0% | |
| GAATGAAAAGGGGCTTGGAG+TGG | + | chr3.4:84477800-84477819 | MS.gene013521:intron | 50.0% | |
| GAGATAAGGATGAAGGGGAG+TGG | - | chr3.4:84477355-84477374 | None:intergenic | 50.0% | |
| GCTCAATCCAGCACAACCTT+GGG | + | chr3.4:84478317-84478336 | MS.gene013521:CDS | 50.0% | |
| GGAATGGTATCATCCCCATC+TGG | + | chr3.4:84478480-84478499 | MS.gene013521:CDS | 50.0% | |
| GGCCTTAGAACTTCAGCTAG+TGG | - | chr3.4:84478363-84478382 | None:intergenic | 50.0% | |
| GGTAGGTGCAGAAGAACAGA+TGG | + | chr3.4:84477075-84477094 | MS.gene013521:CDS | 50.0% | |
| GTCGAATCCATTGGCACTTC+AGG | + | chr3.4:84478453-84478472 | MS.gene013521:CDS | 50.0% | |
| TCCACAGGCTTTCTTGAACG+GGG | - | chr3.4:84477174-84477193 | None:intergenic | 50.0% | |
| TCTGCTGCTGTTGATGCTGA+TGG | + | chr3.4:84476341-84476360 | MS.gene013521:CDS | 50.0% | |
| TGCAGAACCATTGTTGGAGG+TGG | - | chr3.4:84478166-84478185 | None:intergenic | 50.0% | |
| ACCACCACCACCTCCAACAA+TGG | + | chr3.4:84478156-84478175 | MS.gene013521:CDS | 55.0% | |
| CCTTGGGTAGGTTCAACACC+TGG | + | chr3.4:84478333-84478352 | MS.gene013521:CDS | 55.0% | |
| GAACCTACCCAAGGTTGTGC+TGG | - | chr3.4:84478327-84478346 | None:intergenic | 55.0% | |
| GGCTCAATCCAGCACAACCT+TGG | + | chr3.4:84478316-84478335 | MS.gene013521:CDS | 55.0% | |
| GGCTTGGAGTGGATGCTGAA+TGG | + | chr3.4:84477811-84477830 | MS.gene013521:CDS | 55.0% | |
| GGGGGTGATTCTTCTGCTCT+AGG | + | chr3.4:84476395-84476414 | MS.gene013521:CDS | 55.0% | |
| GGTGGAATGGCGGCTTCAAT+AGG | + | chr3.4:84476639-84476658 | MS.gene013521:CDS | 55.0% | |
| GTGTTTGTGGTGGTCACAGC+AGG | + | chr3.4:84476618-84476637 | MS.gene013521:intron | 55.0% | |
| TCCATTGGCACTTCAGGGAC+AGG | + | chr3.4:84478459-84478478 | MS.gene013521:CDS | 55.0% | |
| TCCCCGTTCAAGAAAGCCTG+TGG | + | chr3.4:84477170-84477189 | MS.gene013521:CDS | 55.0% | |
| TGGCACTTCAGGGACAGGAA+TGG | + | chr3.4:84478464-84478483 | MS.gene013521:CDS | 55.0% | |
| TGGGTAGGTTCAACACCTGG+TGG | + | chr3.4:84478336-84478355 | MS.gene013521:CDS | 55.0% | |
| TTTGTGGTGGTCACAGCAGG+TGG | + | chr3.4:84476621-84476640 | MS.gene013521:intron | 55.0% | |
| ! | ACCATTGTTGGAGGTGGTGG+TGG | - | chr3.4:84478160-84478179 | None:intergenic | 55.0% |
| ! | ACTTCAGCTAGTGGACCACC+AGG | - | chr3.4:84478354-84478373 | None:intergenic | 55.0% |
| ! | TCCTGTCCCTGAAGTGCCAA+TGG | - | chr3.4:84478463-84478482 | None:intergenic | 55.0% |
| !! | ATTGTTGGAGGTGGTGGTGG+TGG | - | chr3.4:84478157-84478176 | None:intergenic | 55.0% |
| !! | CCAGGTGTTGAACCTACCCA+AGG | - | chr3.4:84478336-84478355 | None:intergenic | 55.0% |
| !! | GGGTCGGTGCAGAGTTTTGA+AGG | + | chr3.4:84476233-84476252 | MS.gene013521:CDS | 55.0% |
| CTTCTGCACCTACCAGCCTC+TGG | - | chr3.4:84477069-84477088 | None:intergenic | 60.0% | |
| GGTCACAGCAGGTGGAATGG+CGG | + | chr3.4:84476629-84476648 | MS.gene013521:intron | 60.0% | |
| GGTGGTCACAGCAGGTGGAA+TGG | + | chr3.4:84476626-84476645 | MS.gene013521:intron | 60.0% | |
| !! | GGTGGTGGTGGTGGAGGTGT+TGG | - | chr3.4:84478145-84478164 | None:intergenic | 65.0% |
| !! | GTTGGAGGTGGTGGTGGTGG+TGG | - | chr3.4:84478154-84478173 | None:intergenic | 65.0% |
| !! | GGAGGTGGTGGTGGTGGTGG+AGG | - | chr3.4:84478151-84478170 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 84476161 | 84478635 | 84476161 | ID=MS.gene013521 |
| chr3.4 | mRNA | 84476161 | 84478635 | 84476161 | ID=MS.gene013521.t1;Parent=MS.gene013521 |
| chr3.4 | exon | 84476161 | 84476503 | 84476161 | ID=MS.gene013521.t1.exon1;Parent=MS.gene013521.t1 |
| chr3.4 | CDS | 84476161 | 84476503 | 84476161 | ID=cds.MS.gene013521.t1;Parent=MS.gene013521.t1 |
| chr3.4 | exon | 84476637 | 84476771 | 84476637 | ID=MS.gene013521.t1.exon2;Parent=MS.gene013521.t1 |
| chr3.4 | CDS | 84476637 | 84476771 | 84476637 | ID=cds.MS.gene013521.t1;Parent=MS.gene013521.t1 |
| chr3.4 | exon | 84477019 | 84477430 | 84477019 | ID=MS.gene013521.t1.exon3;Parent=MS.gene013521.t1 |
| chr3.4 | CDS | 84477019 | 84477430 | 84477019 | ID=cds.MS.gene013521.t1;Parent=MS.gene013521.t1 |
| chr3.4 | exon | 84477810 | 84478635 | 84477810 | ID=MS.gene013521.t1.exon4;Parent=MS.gene013521.t1 |
| chr3.4 | CDS | 84477810 | 84478635 | 84477810 | ID=cds.MS.gene013521.t1;Parent=MS.gene013521.t1 |
| Gene Sequence |
| Protein sequence |
