AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013603

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013603.t1 MTR_3g091290 99.114 677 6 0 1 677 1 677 0.0 1384
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013603.t1 AT5G53450 67.994 628 188 5 52 675 51 669 0.0 875
MS.gene013603.t1 AT5G53450 69.140 593 175 4 87 675 1 589 0.0 848
MS.gene013603.t1 AT5G53450 73.415 410 103 2 52 460 51 455 0.0 620

Find 193 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAAAATGTCAGACTTTA+AGG 0.129862 3.4:+83586157 MS.gene013603:CDS
TGCCCACTTCATTGACTTAT+TGG 0.179035 3.4:+83590586 MS.gene013603:CDS
AACTGGGCCATACCCGATTT+TGG 0.210340 3.4:+83585908 MS.gene013603:CDS
CTTTGATATGTCTGTCTATT+GGG 0.212760 3.4:-83587217 None:intergenic
ACTTTGATATGTCTGTCTAT+TGG 0.221644 3.4:-83587218 None:intergenic
TTTGACAAATCAAATATTTC+AGG 0.222651 3.4:-83591449 None:intergenic
AACTGGCTGGAGCTGCTTCC+AGG 0.254995 3.4:+83590927 MS.gene013603:CDS
TTGATGAGAGATCTTCTAAT+TGG 0.256001 3.4:+83587007 MS.gene013603:CDS
CTCGTTCTTCGAGGGGTTAA+TGG 0.264678 3.4:+83591506 MS.gene013603:CDS
CCAAACCTTCTCGGAGAATA+AGG 0.274308 3.4:+83589883 MS.gene013603:CDS
CTGGAGGTCCCGCAATTTCT+AGG 0.275529 3.4:+83586963 MS.gene013603:CDS
TGGAGCTGCTTCCAGGAAAA+TGG 0.295461 3.4:+83590934 MS.gene013603:CDS
AATGGTAATGGGAGAGCTTA+TGG 0.295872 3.4:+83588176 MS.gene013603:CDS
CGCAGATGCTTGATAGGAAC+TGG 0.312588 3.4:+83589823 MS.gene013603:intron
CCACAAAAGACCTTGTAAAT+AGG 0.336553 3.4:-83591538 None:intergenic
AAGCAAACGGAAGAGGTCTT+TGG 0.337571 3.4:-83586107 None:intergenic
ACAATGGCACTTTGTAGAAC+TGG 0.349658 3.4:+83585891 None:intergenic
AAGAATGATACAAAAGTTTA+CGG 0.352849 3.4:-83586605 None:intergenic
TCTTACTCAATGCAAGTTCA+TGG 0.355670 3.4:+83586624 MS.gene013603:CDS
ACAGTTGTTTGGATGCTCTA+AGG 0.356940 3.4:+83590224 MS.gene013603:intron
CTTTCCTTCGTCTCTGACAT+TGG 0.357555 3.4:+83591074 MS.gene013603:CDS
AGGACATTACTCTCCAAAAT+CGG 0.359879 3.4:-83585921 None:intergenic
TCATGAATTACCTTTGGCTT+TGG 0.361109 3.4:-83590626 None:intergenic
AGATTGGCTTCAAACTTTAG+AGG 0.363419 3.4:+83586889 MS.gene013603:CDS
TTGCTAGCAATAGAGATAAA+AGG 0.372155 3.4:-83589860 None:intergenic
AGCTAAAGCCTCCTCATTGC+CGG 0.372894 3.4:-83591246 None:intergenic
CCCGTTCCCCTGCGTTTCGC+TGG 0.375211 3.4:+83585984 MS.gene013603:CDS
TTTCCAGCCTCAACTCTGTA+TGG 0.381724 3.4:-83587181 None:intergenic
CCTTATTCTCCGAGAAGGTT+TGG 0.381787 3.4:-83589883 None:intergenic
TAAGGCACCCATTCCTTTGT+GGG 0.389110 3.4:+83590242 MS.gene013603:CDS
TGCTAGCAACCAAACCTTCT+CGG 0.390736 3.4:+83589874 MS.gene013603:CDS
TGAAATGTTCTACAGTTGTT+TGG 0.391603 3.4:+83590213 MS.gene013603:intron
AGGCTCTCATTCCGCCCTTC+CGG 0.392663 3.4:+83591227 MS.gene013603:CDS
CTAAGGCACCCATTCCTTTG+TGG 0.393568 3.4:+83590241 MS.gene013603:CDS
TGCGAGGATGGTTCAAATAG+AGG 0.402772 3.4:+83587999 MS.gene013603:CDS
TGGTTCAAATAGAGGCTCTA+TGG 0.411364 3.4:+83588007 MS.gene013603:CDS
AAAGACCTCTTCCGTTTGCT+TGG 0.420899 3.4:+83586109 MS.gene013603:CDS
CGTTTGCTTGGAGGAGGAAA+CGG 0.423814 3.4:+83586121 MS.gene013603:CDS
ATCTTGGCCCACAAAGGAAT+GGG 0.427323 3.4:-83590249 None:intergenic
GAACCACTACCACCACTTGC+AGG 0.429048 3.4:-83586660 None:intergenic
ATTGGATTCTCAGTCATGAT+TGG 0.433535 3.4:+83591092 MS.gene013603:CDS
ATTGCACTGGGAGGCATGTT+GGG 0.434475 3.4:+83590967 MS.gene013603:CDS
GGTTCATTTATCCTAGTCCA+TGG 0.437619 3.4:+83586678 MS.gene013603:CDS
AACTCTCCATATGGAAATGC+TGG 0.437695 3.4:+83589699 MS.gene013603:CDS
GACCTCTTCCGTTTGCTTGG+AGG 0.438345 3.4:+83586112 MS.gene013603:CDS
CTCTTCCGTTTGCTTGGAGG+AGG 0.440275 3.4:+83586115 MS.gene013603:CDS
TCTTCATTTATACTAAGAGC+TGG 0.440657 3.4:+83591167 MS.gene013603:CDS
CCAGCGAAACGCAGGGGAAC+GGG 0.440698 3.4:-83585984 None:intergenic
CCCTGCAGCCAAGTTTGCGT+CGG 0.442632 3.4:+83591331 MS.gene013603:CDS
CAAGGTTGCTCGTTCTTCGA+GGG 0.443241 3.4:+83591498 MS.gene013603:CDS
CTTGATAGGAACTGGGGTGC+TGG 0.444714 3.4:+83589831 MS.gene013603:CDS
ACTGGCTTCAACAGTCAGAT+TGG 0.445941 3.4:+83586873 MS.gene013603:CDS
GCAAGGTTAAGGACAGTGTT+AGG 0.447501 3.4:+83586324 MS.gene013603:CDS
GATCGTGTTAGCATTGGCCT+TGG 0.450399 3.4:+83586185 MS.gene013603:CDS
CGTGTTAGCATTGGCCTTGG+TGG 0.453499 3.4:+83586188 MS.gene013603:CDS
CGCAATTGCCTAGAAATTGC+GGG 0.453953 3.4:-83586971 None:intergenic
ATCTGCATCTGCTTCTTCAA+TGG 0.455111 3.4:+83586067 MS.gene013603:CDS
CCCGACGCAAACTTGGCTGC+AGG 0.456334 3.4:-83591332 None:intergenic
TTAGCATTGGCCTTGGTGGA+CGG 0.458317 3.4:+83586192 MS.gene013603:CDS
CTCGGCAGAAACTCTCCATA+TGG 0.459506 3.4:+83589690 MS.gene013603:CDS
AATATCACCCGACGCAAACT+TGG 0.460107 3.4:-83591339 None:intergenic
TCAAGGTTGCTCGTTCTTCG+AGG 0.464225 3.4:+83591497 MS.gene013603:CDS
TGTAAGCCAGCATTTCCATA+TGG 0.466848 3.4:-83589705 None:intergenic
TAGCATTGGCCTTGGTGGAC+GGG 0.468949 3.4:+83586193 MS.gene013603:CDS
TTGACGGAAACTCCTTGAAA+GGG 0.469007 3.4:-83591304 None:intergenic
GATATTATCAGATGGGGTCT+AGG 0.469138 3.4:+83590292 MS.gene013603:CDS
CATTCCTTTGTGGGCCAAGA+TGG 0.470311 3.4:+83590251 MS.gene013603:CDS
TTGACAAATCAAATATTTCA+GGG 0.473307 3.4:-83591448 None:intergenic
GCGGATGAGGTGGTGTTTGA+AGG 0.474409 3.4:+83586302 MS.gene013603:CDS
TATTGCACTGGGAGGCATGT+TGG 0.474879 3.4:+83590966 MS.gene013603:CDS
ATGTTTGCGACAGCTTATGA+TGG 0.477520 3.4:+83589662 MS.gene013603:CDS
TCGAGGAAAACGAGCAATAG+AGG 0.477773 3.4:+83586484 MS.gene013603:CDS
TGGCGCCTATTGTATTGCAC+TGG 0.478793 3.4:+83590954 MS.gene013603:CDS
CTTCAAGGTATTGAAGAAGC+TGG 0.479242 3.4:+83586578 MS.gene013603:intron
ATTACCTTTGGCTTTGGATG+AGG 0.480526 3.4:-83590620 None:intergenic
TACTTAACAGGTCGGTACAC+TGG 0.480880 3.4:+83587959 MS.gene013603:intron
CCTGCAGCCAAGTTTGCGTC+GGG 0.481345 3.4:+83591332 MS.gene013603:CDS
GCCTCCCAGTGCAATACAAT+AGG 0.481435 3.4:-83590959 None:intergenic
TTGAACTTTGCGAATATCAA+AGG 0.482258 3.4:-83588201 None:intergenic
CACTGGACGAAGAATCTGTT+AGG 0.487203 3.4:+83586921 MS.gene013603:CDS
TTGGCTGCAGGGAGACTTGA+CGG 0.491792 3.4:-83591320 None:intergenic
ATCTGTGTTACAAAGATGCA+TGG 0.496023 3.4:+83588137 MS.gene013603:intron
CAGTCATGATTGGTCAGGAC+TGG 0.496294 3.4:+83591102 MS.gene013603:CDS
CTCCTCCAAGCAAACGGAAG+AGG 0.498371 3.4:-83586114 None:intergenic
TAGTAGAGAATCAAAGTTGA+AGG 0.500017 3.4:+83591046 MS.gene013603:CDS
CATCTTGGCCCACAAAGGAA+TGG 0.503376 3.4:-83590250 None:intergenic
AAGGTAGGAGAAGACACAAC+TGG 0.503564 3.4:+83586944 MS.gene013603:CDS
ATTCTCAGTCATGATTGGTC+AGG 0.504324 3.4:+83591097 MS.gene013603:CDS
CTTCATTTATACTAAGAGCT+GGG 0.510302 3.4:+83591168 MS.gene013603:CDS
TCCAGCGAAACGCAGGGGAA+CGG 0.511956 3.4:-83585985 None:intergenic
GGTGTTTGAAGGCAAGGTTA+AGG 0.513946 3.4:+83586313 MS.gene013603:CDS
GACGGGACTACTCGCCATCT+TGG 0.515034 3.4:-83590265 None:intergenic
ATAGGAACTGGGGTGCTGGT+TGG 0.515505 3.4:+83589835 MS.gene013603:CDS
CATGACAAAGCTGGTAAAAG+AGG 0.515642 3.4:+83591128 MS.gene013603:CDS
TAACTCTTGTGTTATACAAA+GGG 0.516202 3.4:-83586427 None:intergenic
TTTAGAGGCCACTCTTGCAC+TGG 0.516388 3.4:+83586904 MS.gene013603:CDS
CCTCCTGTCCGTGTACTAGT+TGG 0.516400 3.4:+83591005 MS.gene013603:CDS
CACATATAAATTTGTCGACA+AGG 0.518285 3.4:+83585952 MS.gene013603:CDS
GTTCATTTATCCTAGTCCAT+GGG 0.520244 3.4:+83586679 MS.gene013603:CDS
GGACATTACTCTCCAAAATC+GGG 0.523573 3.4:-83585920 None:intergenic
CGTTTCCTCCTCCAAGCAAA+CGG 0.523851 3.4:-83586120 None:intergenic
ATGATTGTCCAGCGAAACGC+AGG 0.526569 3.4:-83585992 None:intergenic
CTTGACGGAAACTCCTTGAA+AGG 0.528393 3.4:-83591305 None:intergenic
CAATGGCACTTTGTAGAACT+GGG 0.530134 3.4:+83585892 None:intergenic
TGGTAAAAGAGGAAGGGTGC+AGG 0.532874 3.4:+83591139 MS.gene013603:CDS
ATCTGATAATATCCATCGAC+GGG 0.535110 3.4:-83590282 None:intergenic
CCGCCCTTCCGGCAATGAGG+AGG 0.538522 3.4:+83591238 MS.gene013603:CDS
GTACATTTATCGTCAGCCTC+AGG 0.540143 3.4:+83590342 MS.gene013603:CDS
GTCAGAGACGAAGGAAAGGT+TGG 0.543516 3.4:-83591069 None:intergenic
TTCCAGCCTCAACTCTGTAT+GGG 0.543666 3.4:-83587180 None:intergenic
TGAGGTGGTGTTTGAAGGCA+AGG 0.544552 3.4:+83586307 MS.gene013603:CDS
CTAGTACACGGACAGGAGGT+TGG 0.544865 3.4:-83591001 None:intergenic
ACTTAACAGGTCGGTACACT+GGG 0.545500 3.4:+83587960 MS.gene013603:intron
ATAACTCTTGTGTTATACAA+AGG 0.547349 3.4:-83586428 None:intergenic
GATTGTGTGTGGAACTTATG+TGG 0.547710 3.4:+83591472 MS.gene013603:CDS
TTACTCTCCAAAATCGGGTA+TGG 0.548971 3.4:-83585915 None:intergenic
GACAAATCAAATATTTCAGG+GGG 0.549563 3.4:-83591446 None:intergenic
AATTTATATGTGAATAAGCT+AGG 0.549732 3.4:-83585941 None:intergenic
TGCCCATACAGAGTTGAGGC+TGG 0.551335 3.4:+83587178 MS.gene013603:CDS
GTCGATGGATATTATCAGAT+GGG 0.551619 3.4:+83590285 MS.gene013603:CDS
TAGAGGCTCTATGGAAAACA+TGG 0.554608 3.4:+83588016 MS.gene013603:CDS
GATCAGCTCTCCTATTTACA+AGG 0.554698 3.4:+83591528 MS.gene013603:CDS
TTCTTCGTCCAGTGCAAGAG+TGG 0.555251 3.4:-83586912 None:intergenic
GCATACCTTATTCTCCGAGA+AGG 0.557155 3.4:-83589888 None:intergenic
TTCAAGGTATTGAAGAAGCT+GGG 0.558924 3.4:+83586579 MS.gene013603:intron
ATCTCGTTGCCTGCAAGTGG+TGG 0.559120 3.4:+83586651 MS.gene013603:CDS
AAAGCCTCCTCATTGCCGGA+AGG 0.559182 3.4:-83591242 None:intergenic
ATGGCGAGTAGTCCCGTCGA+TGG 0.559384 3.4:+83590270 MS.gene013603:CDS
AGGAAACGGATCATGTTATG+AGG 0.560637 3.4:+83586135 MS.gene013603:CDS
TTGCCTGCAAGTGGTGGTAG+TGG 0.560869 3.4:+83586657 MS.gene013603:CDS
TCGCAATTGCCTAGAAATTG+CGG 0.561333 3.4:-83586972 None:intergenic
CGTCGATGGATATTATCAGA+TGG 0.561808 3.4:+83590284 MS.gene013603:CDS
GCTCTATGGAAAACATGGAC+AGG 0.562416 3.4:+83588021 MS.gene013603:CDS
GAAGAATCTGTTAGGAAGGT+AGG 0.562509 3.4:+83586929 MS.gene013603:CDS
GACTGGCCTCATGACAAAGC+TGG 0.565510 3.4:+83591119 MS.gene013603:CDS
ACAAAGCTGGTAAAAGAGGA+AGG 0.567006 3.4:+83591132 MS.gene013603:CDS
GTTAATTACCTGCATAGTCA+TGG 0.568531 3.4:+83587152 MS.gene013603:CDS
CCGACGCAAACTTGGCTGCA+GGG 0.569318 3.4:-83591331 None:intergenic
TTCAATGGAGTCGCATGAAG+AGG 0.571118 3.4:+83586082 MS.gene013603:CDS
CACGGACAGGAGGTTGGCGA+AGG 0.572597 3.4:-83590995 None:intergenic
AAGCCTCCTCATTGCCGGAA+GGG 0.572759 3.4:-83591241 None:intergenic
TCTGTGTTACAAAGATGCAT+GGG 0.575090 3.4:+83588138 MS.gene013603:intron
GGGCAAGACCATGACTATGC+AGG 0.575441 3.4:-83587160 None:intergenic
GCTGGACAATCATCAAATGC+AGG 0.586031 3.4:+83586002 MS.gene013603:CDS
AGATACATACCCCATGGACT+AGG 0.586226 3.4:-83586689 None:intergenic
TTATACTAAGAGCTGGGAGA+CGG 0.586602 3.4:+83591174 MS.gene013603:CDS
TCTCCAACTAGTACACGGAC+AGG 0.586958 3.4:-83591008 None:intergenic
CCTCCTCATTGCCGGAAGGG+CGG 0.591041 3.4:-83591238 None:intergenic
GCAGATGCTTGATAGGAACT+GGG 0.593828 3.4:+83589824 MS.gene013603:intron
TGACAAATCAAATATTTCAG+GGG 0.599665 3.4:-83591447 None:intergenic
CTCCAATAAGTCAATGAAGT+GGG 0.600928 3.4:-83590588 None:intergenic
CAATGTCAGAGACGAAGGAA+AGG 0.601326 3.4:-83591073 None:intergenic
GGCGCCTATTGTATTGCACT+GGG 0.603294 3.4:+83590955 MS.gene013603:CDS
CACTGCAATGCGTATTAGTG+AGG 0.603654 3.4:+83590318 MS.gene013603:CDS
AAGGTTGCTCGTTCTTCGAG+GGG 0.606778 3.4:+83591499 MS.gene013603:CDS
ATAAGCTGTCGCAAACATGA+AGG 0.607676 3.4:-83589657 None:intergenic
TTCATGTGTCCAGAACTGGC+TGG 0.607798 3.4:+83590914 MS.gene013603:intron
GATTTGTCAAAGATTGTGTG+TGG 0.608670 3.4:+83591461 MS.gene013603:CDS
TAACTTGCCATACCTTTGTG+AGG 0.609041 3.4:-83588230 None:intergenic
GGACGAAGAATCTGTTAGGA+AGG 0.614608 3.4:+83586925 MS.gene013603:CDS
TATATCTCGTTGCCTGCAAG+TGG 0.614918 3.4:+83586648 MS.gene013603:CDS
TCTCCAATAAGTCAATGAAG+TGG 0.615738 3.4:-83590589 None:intergenic
TTCATTTATCCTAGTCCATG+GGG 0.619570 3.4:+83586680 MS.gene013603:CDS
CAGCTTATGATGGAAATCCT+CGG 0.622225 3.4:+83589672 MS.gene013603:CDS
GAATCCAATGTCAGAGACGA+AGG 0.623030 3.4:-83591078 None:intergenic
CTCGCCATCTTGGCCCACAA+AGG 0.624193 3.4:-83590255 None:intergenic
GTGGAACTTATGTGGACTCA+AGG 0.624300 3.4:+83591480 MS.gene013603:CDS
TGACGGAAACTCCTTGAAAG+GGG 0.627226 3.4:-83591303 None:intergenic
TAATATGCAGTTCTTCACTA+CGG 0.627898 3.4:+83586042 MS.gene013603:CDS
CATCTGATAATATCCATCGA+CGG 0.629067 3.4:-83590283 None:intergenic
GTTCAAATCATTCCTCACAA+AGG 0.633223 3.4:+83588218 MS.gene013603:CDS
GTCTTGCCCATACAGAGTTG+AGG 0.635746 3.4:+83587174 MS.gene013603:CDS
TGATGATTGCATTTGACATG+AGG 0.640141 3.4:+83588051 MS.gene013603:CDS
GAATCCTCATCCAAAGCCAA+AGG 0.640345 3.4:+83590616 MS.gene013603:CDS
TTTGCTATAGGCGGATGAGG+TGG 0.651791 3.4:+83586292 MS.gene013603:intron
ATTCCGCCCTTCCGGCAATG+AGG 0.652081 3.4:+83591235 MS.gene013603:CDS
GCCTATTGTATTGCACTGGG+AGG 0.658776 3.4:+83590958 MS.gene013603:CDS
ACCATCCTCGCAAAAGTCAG+CGG 0.660725 3.4:-83587988 None:intergenic
CAAAGCTGGTAAAAGAGGAA+GGG 0.663205 3.4:+83591133 MS.gene013603:CDS
TGCAGGCAAGAGAAAGCACA+AGG 0.672647 3.4:+83586019 MS.gene013603:CDS
AGTTCCCAAGCTCAGCGTCG+AGG 0.673683 3.4:+83586467 MS.gene013603:CDS
TCGATGGATATTATCAGATG+GGG 0.674719 3.4:+83590286 MS.gene013603:CDS
ACGGACAGGAGGTTGGCGAA+GGG 0.679588 3.4:-83590994 None:intergenic
CCAACTAGTACACGGACAGG+AGG 0.684433 3.4:-83591005 None:intergenic
GATTTCATACCCGTCCACCA+AGG 0.686883 3.4:-83586202 None:intergenic
GCAAATCTCCAACTAGTACA+CGG 0.688715 3.4:-83591013 None:intergenic
CAGATGCTTGATAGGAACTG+GGG 0.692383 3.4:+83589825 MS.gene013603:intron
GATTGTCCAGCGAAACGCAG+GGG 0.700725 3.4:-83585990 None:intergenic
TGATTGTCCAGCGAAACGCA+GGG 0.710536 3.4:-83585991 None:intergenic
GCGGAATGAGAGCCTCTCTG+AGG 0.711146 3.4:-83591219 None:intergenic
AGCAAGACAATACCTCAGAG+AGG 0.731039 3.4:+83591207 MS.gene013603:CDS
CATATGGAGAGTTTCTGCCG+AGG 0.733805 3.4:-83589689 None:intergenic
GTAGGAGAAGACACAACTGG+AGG 0.772677 3.4:+83586947 MS.gene013603:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAAATAATTTTGAGT+TGG - chr3.4:83588872-83588891 None:intergenic 10.0%
!!! GTTAATATTGTATTTAATTT+TGG + chr3.4:83588249-83588268 MS.gene013603:intron 10.0%
!! AAAAGTTATGAAAACAAAAA+TGG - chr3.4:83589783-83589802 None:intergenic 15.0%
!! AGAAATGTAATAAAATAATG+AGG - chr3.4:83589386-83589405 None:intergenic 15.0%
!! TGAGAATAATACTAAATTAA+TGG + chr3.4:83589283-83589302 MS.gene013603:intron 15.0%
!!! ATATTTTTGATGTTATCATA+AGG + chr3.4:83588955-83588974 MS.gene013603:intron 15.0%
!!! TATTTTTGATGTTATCATAA+GGG + chr3.4:83588956-83588975 MS.gene013603:intron 15.0%
!!! TCATATTTAATTTATGTTTC+TGG - chr3.4:83588757-83588776 None:intergenic 15.0%
!!! TCATTATTTTATTACATTTC+TGG + chr3.4:83589385-83589404 MS.gene013603:intron 15.0%
!!! TGGATTAATTTTTTTAATTC+CGG + chr3.4:83586251-83586270 MS.gene013603:intron 15.0%
!! AAAAATCTGATATGAGAAAT+AGG + chr3.4:83588498-83588517 MS.gene013603:intron 20.0%
!! AAAATCTGATATGAGAAATA+GGG + chr3.4:83588499-83588518 MS.gene013603:intron 20.0%
!! AAGAATGATACAAAAGTTTA+CGG - chr3.4:83586608-83586627 None:intergenic 20.0%
!! AATTTATATGTGAATAAGCT+AGG - chr3.4:83585944-83585963 None:intergenic 20.0%
!! ATATATAAACCATCTTACAA+GGG - chr3.4:83588724-83588743 None:intergenic 20.0%
!! CAAATGTAACCTTATTATTA+AGG - chr3.4:83590482-83590501 None:intergenic 20.0%
!! GAAAAAGGAACAAATTATTT+AGG - chr3.4:83588407-83588426 None:intergenic 20.0%
!! TATATATAAACCATCTTACA+AGG - chr3.4:83588725-83588744 None:intergenic 20.0%
!! TTGACAAATCAAATATTTCA+GGG - chr3.4:83591451-83591470 None:intergenic 20.0%
!! TTTGACAAATCAAATATTTC+AGG - chr3.4:83591452-83591471 None:intergenic 20.0%
!!! AATTCATTACCTTGATATTT+TGG - chr3.4:83587533-83587552 None:intergenic 20.0%
!!! ATTAAAATTTGTGACTGTTT+TGG - chr3.4:83590864-83590883 None:intergenic 20.0%
!!! ATTAATTTTTTTAATTCCGG+TGG + chr3.4:83586254-83586273 MS.gene013603:intron 20.0%
!!! ATTCATTACCTTGATATTTT+GGG - chr3.4:83587532-83587551 None:intergenic 20.0%
!!! CATTTTAGTGTTATTAATAG+CGG + chr3.4:83588452-83588471 MS.gene013603:intron 20.0%
!!! CTATGATTATCTTTTAGTAT+TGG - chr3.4:83589500-83589519 None:intergenic 20.0%
!!! TAAAAGTATGACTTTTTAGA+AGG + chr3.4:83588285-83588304 MS.gene013603:intron 20.0%
!!! TCTTCAAATTTTCATGATAA+TGG - chr3.4:83589237-83589256 None:intergenic 20.0%
! AAATGTCTTATATAAGCACA+AGG - chr3.4:83590422-83590441 None:intergenic 25.0%
! AACATATGACATATACTTTC+TGG + chr3.4:83587793-83587812 MS.gene013603:intron 25.0%
! ACAATGGTTTATTTACTTTC+AGG + chr3.4:83587130-83587149 MS.gene013603:intron 25.0%
! ACCAACAAAATATTGTGAAA+AGG - chr3.4:83586556-83586575 None:intergenic 25.0%
! ATAACTCTTGTGTTATACAA+AGG - chr3.4:83586431-83586450 None:intergenic 25.0%
! ATAATGGCAAAAATGGTAAT+GGG + chr3.4:83588165-83588184 MS.gene013603:CDS 25.0%
! ATATGTCATATGTTAGGTAT+CGG - chr3.4:83587787-83587806 None:intergenic 25.0%
! ATCTAATCAAATGCTATTCA+TGG - chr3.4:83590144-83590163 None:intergenic 25.0%
! ATCTGCGAGAAAATAATATA+AGG - chr3.4:83589810-83589829 None:intergenic 25.0%
! ATGAATAATGGCATATAAGT+TGG - chr3.4:83590899-83590918 None:intergenic 25.0%
! ATTCTAACAAATATGTAGAC+AGG + chr3.4:83589550-83589569 MS.gene013603:intron 25.0%
! ATTGTAGAAGAAACAATACT+AGG - chr3.4:83590676-83590695 None:intergenic 25.0%
! CAACAAAATATTGTGAAAAG+GGG - chr3.4:83586554-83586573 None:intergenic 25.0%
! CCAACAAAATATTGTGAAAA+GGG - chr3.4:83586555-83586574 None:intergenic 25.0%
! GAAAAGAATTATTACAGAGA+TGG + chr3.4:83587553-83587572 MS.gene013603:intron 25.0%
! TAACTCTTGTGTTATACAAA+GGG - chr3.4:83586430-83586449 None:intergenic 25.0%
! TATAATGGCAAAAATGGTAA+TGG + chr3.4:83588164-83588183 MS.gene013603:CDS 25.0%
! TATTATTAAGGAAAAACTCG+AGG - chr3.4:83590470-83590489 None:intergenic 25.0%
! TGACAAATCAAATATTTCAG+GGG - chr3.4:83591450-83591469 None:intergenic 25.0%
! TTATTCAGTTAGAAACCATA+TGG - chr3.4:83587641-83587660 None:intergenic 25.0%
!! AACTCTATTTAGCACATTTT+TGG + chr3.4:83587748-83587767 MS.gene013603:intron 25.0%
!! ACTCTATTTAGCACATTTTT+GGG + chr3.4:83587749-83587768 MS.gene013603:intron 25.0%
!! AGCGATTATTTCTTACATAT+CGG - chr3.4:83589004-83589023 None:intergenic 25.0%
!! ATATTTTGTTGGTATCTTCA+AGG + chr3.4:83586563-83586582 MS.gene013603:intron 25.0%
!! CGAGTTTTTCCTTAATAATA+AGG + chr3.4:83590470-83590489 MS.gene013603:intron 25.0%
!! GAAAGTATATGTCATATGTT+AGG - chr3.4:83587793-83587812 None:intergenic 25.0%
!! TCATACTTTTAAACAGTCAA+GGG - chr3.4:83588276-83588295 None:intergenic 25.0%
!! TTTTACTCATGAATTACCTT+TGG - chr3.4:83590635-83590654 None:intergenic 25.0%
!!! AGAAATTTTCTAGCAAGAAA+TGG + chr3.4:83591270-83591289 MS.gene013603:CDS 25.0%
!!! ATGAAGTGTTGTTAAATAAC+CGG - chr3.4:83589197-83589216 None:intergenic 25.0%
!!! GTATCAATGTTTTGATCTAA+AGG - chr3.4:83591389-83591408 None:intergenic 25.0%
!!! GTTTGTTATATTTGCTGATA+TGG - chr3.4:83587731-83587750 None:intergenic 25.0%
!!! GTTTTAACCTTAATGTTTTC+TGG + chr3.4:83587045-83587064 MS.gene013603:intron 25.0%
!!! TCATTTTTCTGTCTTTTATG+TGG + chr3.4:83587281-83587300 MS.gene013603:intron 25.0%
!!! TGTTGATAGTTTGAACATTT+CGG + chr3.4:83587400-83587419 MS.gene013603:intron 25.0%
AAATTAATGGTTAAGTCACG+TGG + chr3.4:83589296-83589315 MS.gene013603:intron 30.0%
AACAACACTTCATTTATAGC+AGG + chr3.4:83589204-83589223 MS.gene013603:intron 30.0%
AAGATAAACAGCTCAATGTA+GGG - chr3.4:83589965-83589984 None:intergenic 30.0%
AAGTAAACTACTACAGATCA+TGG - chr3.4:83589322-83589341 None:intergenic 30.0%
AAGTTCACAATTAATCCAAC+TGG + chr3.4:83590822-83590841 MS.gene013603:intron 30.0%
AATATGCCTCATACAAACTA+AGG + chr3.4:83588381-83588400 MS.gene013603:intron 30.0%
ACTTTGATATGTCTGTCTAT+TGG - chr3.4:83587221-83587240 None:intergenic 30.0%
AGTTAGAAACCATATGGTTT+GGG - chr3.4:83587635-83587654 None:intergenic 30.0%
ATAGTTACCCTAACAAATGT+AGG + chr3.4:83589516-83589535 MS.gene013603:intron 30.0%
ATGATCTGTAGTAGTTTACT+TGG + chr3.4:83589321-83589340 MS.gene013603:intron 30.0%
ATGTCTTCCAGAAAACATTA+AGG - chr3.4:83587055-83587074 None:intergenic 30.0%
CACATATAAATTTGTCGACA+AGG + chr3.4:83585952-83585971 MS.gene013603:CDS 30.0%
CTGATAATTCAAATTACACG+TGG + chr3.4:83589441-83589460 MS.gene013603:intron 30.0%
CTTCATTTATACTAAGAGCT+GGG + chr3.4:83591168-83591187 MS.gene013603:CDS 30.0%
CTTTGATATGTCTGTCTATT+GGG - chr3.4:83587220-83587239 None:intergenic 30.0%
GAAACAAGTCACGATATATA+AGG + chr3.4:83589463-83589482 MS.gene013603:intron 30.0%
GACAAATCAAATATTTCAGG+GGG - chr3.4:83591449-83591468 None:intergenic 30.0%
GCGAAATGACAATAACATAT+CGG + chr3.4:83589063-83589082 MS.gene013603:intron 30.0%
GGAAAATGACAGTTATATGA+AGG - chr3.4:83587695-83587714 None:intergenic 30.0%
GTTCAAAATGTCAGACTTTA+AGG + chr3.4:83586157-83586176 MS.gene013603:CDS 30.0%
TAATATGCAGTTCTTCACTA+CGG + chr3.4:83586042-83586061 MS.gene013603:CDS 30.0%
TAGTAGAGAATCAAAGTTGA+AGG + chr3.4:83591046-83591065 MS.gene013603:CDS 30.0%
TATGTCATATGTTAGGTATC+GGG - chr3.4:83587786-83587805 None:intergenic 30.0%
TATTTATTTCAACCGCTTTG+TGG - chr3.4:83588552-83588571 None:intergenic 30.0%
TCAACATACCTACATTTGTT+AGG - chr3.4:83589527-83589546 None:intergenic 30.0%
TCTTCATTTATACTAAGAGC+TGG + chr3.4:83591167-83591186 MS.gene013603:CDS 30.0%
TGAAATGTTCTACAGTTGTT+TGG + chr3.4:83590213-83590232 MS.gene013603:intron 30.0%
TGATAGAACCCAAAATATCA+AGG + chr3.4:83587521-83587540 MS.gene013603:intron 30.0%
TGATCTGTAGTAGTTTACTT+GGG + chr3.4:83589322-83589341 MS.gene013603:intron 30.0%
TTGAACTTTGCGAATATCAA+AGG - chr3.4:83588204-83588223 None:intergenic 30.0%
TTGATGAGAGATCTTCTAAT+TGG + chr3.4:83587007-83587026 MS.gene013603:CDS 30.0%
TTGCTAGCAATAGAGATAAA+AGG - chr3.4:83589863-83589882 None:intergenic 30.0%
! ACATTTTCCTATCAGTATCA+TGG + chr3.4:83586833-83586852 MS.gene013603:intron 30.0%
! AGGAGTGATATTTTCTACAA+TGG + chr3.4:83587114-83587133 MS.gene013603:intron 30.0%
! AGTGGTTCTTTTTATGCAAA+GGG - chr3.4:83586793-83586812 None:intergenic 30.0%
! CAACATACCTACATTTGTTA+GGG - chr3.4:83589526-83589545 None:intergenic 30.0%
! CATACTTTTAAACAGTCAAG+GGG - chr3.4:83588275-83588294 None:intergenic 30.0%
! CCCTTTTCACAATATTTTGT+TGG + chr3.4:83586552-83586571 MS.gene013603:intron 30.0%
! CTAATTAACCTCTAACTTGT+AGG - chr3.4:83588629-83588648 None:intergenic 30.0%
! CTTATCAGGTTTTCTATCTT+AGG - chr3.4:83587453-83587472 None:intergenic 30.0%
! GTCATACTTTTAAACAGTCA+AGG - chr3.4:83588277-83588296 None:intergenic 30.0%
!! AAGATGCATGGGTTTTATAA+TGG + chr3.4:83588149-83588168 MS.gene013603:intron 30.0%
!! CATCGATTAAGTTTTGCTAT+AGG + chr3.4:83586280-83586299 MS.gene013603:intron 30.0%
!! GGGTTTTATAATGGCAAAAA+TGG + chr3.4:83588158-83588177 MS.gene013603:CDS 30.0%
!! TCTAACTTGTAGGTTTTTGA+GGG - chr3.4:83588619-83588638 None:intergenic 30.0%
!!! ATAATTTTGAGTTGGTGATG+AGG - chr3.4:83588864-83588883 None:intergenic 30.0%
AAAACTGCCATGATACTGAT+AGG - chr3.4:83586843-83586862 None:intergenic 35.0%
AAAGAATGGTTTAGGCTCTT+GGG - chr3.4:83590753-83590772 None:intergenic 35.0%
AAATAGACAACATTCAGAGC+AGG - chr3.4:83586758-83586777 None:intergenic 35.0%
AAATGCTTTATAGACCGTGA+AGG + chr3.4:83588330-83588349 MS.gene013603:intron 35.0%
AACCGATTGTCTTAGATGTA+AGG + chr3.4:83588693-83588712 MS.gene013603:intron 35.0%
AACTCATCATGTAACCTGAA+CGG - chr3.4:83586366-83586385 None:intergenic 35.0%
AACTTCACAAACGATATCCT+AGG - chr3.4:83588082-83588101 None:intergenic 35.0%
AATCATTCCTCACAAAGGTA+TGG + chr3.4:83588223-83588242 MS.gene013603:intron 35.0%
ACCGATTGTCTTAGATGTAA+GGG + chr3.4:83588694-83588713 MS.gene013603:intron 35.0%
ACCTGTTAAGTAAACACTTC+AGG - chr3.4:83587951-83587970 None:intergenic 35.0%
ACTTGGGAAAGACTATTTGT+AGG + chr3.4:83589338-83589357 MS.gene013603:intron 35.0%
AGAGAAATGTCTCTTCTCTA+AGG - chr3.4:83587607-83587626 None:intergenic 35.0%
AGATAAACAGCTCAATGTAG+GGG - chr3.4:83589964-83589983 None:intergenic 35.0%
AGATAATTCTTTGTCCGTTC+AGG + chr3.4:83586349-83586368 MS.gene013603:intron 35.0%
AGGACATTACTCTCCAAAAT+CGG - chr3.4:83585924-83585943 None:intergenic 35.0%
AGTTACTGTACACCAATAGT+TGG + chr3.4:83587875-83587894 MS.gene013603:intron 35.0%
ATCTGATAATATCCATCGAC+GGG - chr3.4:83590285-83590304 None:intergenic 35.0%
ATCTGTGTTACAAAGATGCA+TGG + chr3.4:83588137-83588156 MS.gene013603:intron 35.0%
ATTATTCATGTGTCCAGAAC+TGG + chr3.4:83590910-83590929 MS.gene013603:intron 35.0%
ATTGCATTTGACATGAGGTA+TGG + chr3.4:83588056-83588075 MS.gene013603:intron 35.0%
ATTGGATTCTCAGTCATGAT+TGG + chr3.4:83591092-83591111 MS.gene013603:CDS 35.0%
ATTTGTAGGTCTACTGTAAG+TGG + chr3.4:83589352-83589371 MS.gene013603:intron 35.0%
CAACTGTAGAACATTTCACA+TGG - chr3.4:83590211-83590230 None:intergenic 35.0%
CAAGATAAACAGCTCAATGT+AGG - chr3.4:83589966-83589985 None:intergenic 35.0%
CAAGTTAGAGGTTAATTAGC+AGG + chr3.4:83588630-83588649 MS.gene013603:intron 35.0%
CAGTTAGAAACCATATGGTT+TGG - chr3.4:83587636-83587655 None:intergenic 35.0%
CATCTGATAATATCCATCGA+CGG - chr3.4:83590286-83590305 None:intergenic 35.0%
CCACAAAAGACCTTGTAAAT+AGG - chr3.4:83591541-83591560 None:intergenic 35.0%
CTCAAAAACCTACAAGTTAG+AGG + chr3.4:83588618-83588637 MS.gene013603:intron 35.0%
CTCCAATAAGTCAATGAAGT+GGG - chr3.4:83590591-83590610 None:intergenic 35.0%
GAAGTGAAGAGAAAAGATAG+AGG + chr3.4:83588782-83588801 MS.gene013603:intron 35.0%
GAGAAAAATAACCCCTTTCA+AGG + chr3.4:83591292-83591311 MS.gene013603:CDS 35.0%
GATTTGTCAAAGATTGTGTG+TGG + chr3.4:83591461-83591480 MS.gene013603:CDS 35.0%
GTCGATGGATATTATCAGAT+GGG + chr3.4:83590285-83590304 MS.gene013603:CDS 35.0%
GTTAATTACCTGCATAGTCA+TGG + chr3.4:83587152-83587171 MS.gene013603:CDS 35.0%
GTTCAAATCATTCCTCACAA+AGG + chr3.4:83588218-83588237 MS.gene013603:CDS 35.0%
GTTCATTTATCCTAGTCCAT+GGG + chr3.4:83586679-83586698 MS.gene013603:CDS 35.0%
TCGATGGATATTATCAGATG+GGG + chr3.4:83590286-83590305 MS.gene013603:CDS 35.0%
TCTCCAATAAGTCAATGAAG+TGG - chr3.4:83590592-83590611 None:intergenic 35.0%
TCTGTGTTACAAAGATGCAT+GGG + chr3.4:83588138-83588157 MS.gene013603:intron 35.0%
TCTTACTCAATGCAAGTTCA+TGG + chr3.4:83586624-83586643 MS.gene013603:CDS 35.0%
TCTTGCCACATTAAACTTCA+GGG + chr3.4:83589627-83589646 MS.gene013603:intron 35.0%
TGATGATTGCATTTGACATG+AGG + chr3.4:83588051-83588070 MS.gene013603:CDS 35.0%
TGATGTACAAAACCTTCTCT+GGG - chr3.4:83587335-83587354 None:intergenic 35.0%
TGCAAGTATTCAAGCACTTA+TGG - chr3.4:83587084-83587103 None:intergenic 35.0%
TTCATTTATCCTAGTCCATG+GGG + chr3.4:83586680-83586699 MS.gene013603:CDS 35.0%
TTCTTGCCACATTAAACTTC+AGG + chr3.4:83589626-83589645 MS.gene013603:intron 35.0%
TTTATATAACCCCACAACCT+AGG - chr3.4:83588835-83588854 None:intergenic 35.0%
! ACCCTTACATCTAAGACAAT+CGG - chr3.4:83588698-83588717 None:intergenic 35.0%
! ACCTGAAGTGTTTACTTAAC+AGG + chr3.4:83587947-83587966 MS.gene013603:intron 35.0%
! AGAACCACTGATGTTCTTTT+TGG + chr3.4:83586804-83586823 MS.gene013603:intron 35.0%
! AGCAGTGACTTTTTGCATAT+CGG - chr3.4:83589031-83589050 None:intergenic 35.0%
! CAGTGGTTCTTTTTATGCAA+AGG - chr3.4:83586794-83586813 None:intergenic 35.0%
! CCTATTTACAAGGTCTTTTG+TGG + chr3.4:83591538-83591557 MS.gene013603:CDS 35.0%
! GAAGTGTTTACTTAACAGGT+CGG + chr3.4:83587951-83587970 MS.gene013603:intron 35.0%
! GTCTATAAAGCATTTGAGTC+AGG - chr3.4:83588325-83588344 None:intergenic 35.0%
! GTGGTTCTTTTTATGCAAAG+GGG - chr3.4:83586792-83586811 None:intergenic 35.0%
! TCAAGTTTCTTTGGTCTTTC+AGG + chr3.4:83590071-83590090 MS.gene013603:intron 35.0%
! TCATGAATTACCTTTGGCTT+TGG - chr3.4:83590629-83590648 None:intergenic 35.0%
!! AGATTGGCTTCAAACTTTAG+AGG + chr3.4:83586889-83586908 MS.gene013603:CDS 35.0%
!! AGTTCTGGACACATGAATAA+TGG - chr3.4:83590911-83590930 None:intergenic 35.0%
!! CGATTAAGTTTTGCTATAGG+CGG + chr3.4:83586283-83586302 MS.gene013603:intron 35.0%
!! CTCTAACTTGTAGGTTTTTG+AGG - chr3.4:83588620-83588639 None:intergenic 35.0%
!! GAGAAGTGTTCAAGTTTCTT+TGG + chr3.4:83590062-83590081 MS.gene013603:intron 35.0%
!! GTTTTAGATCGTGTTAGCAT+TGG + chr3.4:83586179-83586198 MS.gene013603:CDS 35.0%
!! TTCAAGGTATTGAAGAAGCT+GGG + chr3.4:83586579-83586598 MS.gene013603:intron 35.0%
!! TTTAGCACATTTTTGGGCTT+AGG + chr3.4:83587755-83587774 MS.gene013603:intron 35.0%
!! TTTAGGCCTTAGTTTGTATG+AGG - chr3.4:83588390-83588409 None:intergenic 35.0%
!!! AACTTTTGCTCTGGGATTAT+AGG - chr3.4:83587584-83587603 None:intergenic 35.0%
!!! ACTTTTGCTCTGGGATTATA+GGG - chr3.4:83587583-83587602 None:intergenic 35.0%
!!! GTTTTGGTGATTGTTTTAGC+TGG - chr3.4:83590848-83590867 None:intergenic 35.0%
!!! TCTGGTTGATGATTTTCACT+GGG + chr3.4:83587811-83587830 MS.gene013603:intron 35.0%
!!! TTCTGGTTGATGATTTTCAC+TGG + chr3.4:83587810-83587829 MS.gene013603:intron 35.0%
!!! TTTCTATGTTTTAGCGCAGT+AGG + chr3.4:83590561-83590580 MS.gene013603:intron 35.0%
AAAAGTCACTGCTATTGCAG+TGG + chr3.4:83589038-83589057 MS.gene013603:intron 40.0%
AAATAGCAGTAGCCACAAAG+CGG + chr3.4:83588537-83588556 MS.gene013603:intron 40.0%
AACTCTCCATATGGAAATGC+TGG + chr3.4:83589699-83589718 MS.gene013603:CDS 40.0%
AACTTAATCGATGAGACCAC+CGG - chr3.4:83586273-83586292 None:intergenic 40.0%
AAGAGAAAAGATAGAGGCAG+AGG + chr3.4:83588788-83588807 MS.gene013603:intron 40.0%
AATACTTGCACAGCAACATG+AGG + chr3.4:83587094-83587113 MS.gene013603:intron 40.0%
ACAAAGCTGGTAAAAGAGGA+AGG + chr3.4:83591132-83591151 MS.gene013603:CDS 40.0%
ACAGAAACACATTGCGTGTA+TGG - chr3.4:83590386-83590405 None:intergenic 40.0%
ACAGTTGTTTGGATGCTCTA+AGG + chr3.4:83590224-83590243 MS.gene013603:intron 40.0%
ACTTTACGATGTGTCATGAC+TGG + chr3.4:83586231-83586250 MS.gene013603:intron 40.0%
AGCCATGGAAAGAATGGTTT+AGG - chr3.4:83590761-83590780 None:intergenic 40.0%
AGCCTAAACCATTCTTTCCA+TGG + chr3.4:83590756-83590775 MS.gene013603:intron 40.0%
AGGAAACGGATCATGTTATG+AGG + chr3.4:83586135-83586154 MS.gene013603:CDS 40.0%
AGTCTGTTGCACTTCTTATC+AGG - chr3.4:83587467-83587486 None:intergenic 40.0%
ATAAGCTGTCGCAAACATGA+AGG - chr3.4:83589660-83589679 None:intergenic 40.0%
ATACTCACAGCTTACAGCAA+AGG - chr3.4:83588431-83588450 None:intergenic 40.0%
ATCTGCATCTGCTTCTTCAA+TGG + chr3.4:83586067-83586086 MS.gene013603:CDS 40.0%
ATGACAGTTATATGAAGGCC+AGG - chr3.4:83587690-83587709 None:intergenic 40.0%
ATGTTTGCGACAGCTTATGA+TGG + chr3.4:83589662-83589681 MS.gene013603:CDS 40.0%
ATTGACAGCCATGGAAAGAA+TGG - chr3.4:83590767-83590786 None:intergenic 40.0%
CAAACCAAGCATGAGAAGAA+AGG - chr3.4:83587927-83587946 None:intergenic 40.0%
CAAAGCTGGTAAAAGAGGAA+GGG + chr3.4:83591133-83591152 MS.gene013603:CDS 40.0%
CAAATCCCGAGATGTAATAG+CGG + chr3.4:83589104-83589123 MS.gene013603:intron 40.0%
CAGAAACACATTGCGTGTAT+GGG - chr3.4:83590385-83590404 None:intergenic 40.0%
CATGACAAAGCTGGTAAAAG+AGG + chr3.4:83591128-83591147 MS.gene013603:CDS 40.0%
CATGAGGAAACACCAACTAT+TGG - chr3.4:83587890-83587909 None:intergenic 40.0%
CATTCCCCTGAAGTTTAATG+TGG - chr3.4:83589635-83589654 None:intergenic 40.0%
CCTATACCGCTATTACATCT+CGG - chr3.4:83589113-83589132 None:intergenic 40.0%
CGAGATGTAATAGCGGTATA+GGG + chr3.4:83589111-83589130 MS.gene013603:intron 40.0%
CGTCGATGGATATTATCAGA+TGG + chr3.4:83590284-83590303 MS.gene013603:CDS 40.0%
CTATACCGCTATTACATCTC+GGG - chr3.4:83589112-83589131 None:intergenic 40.0%
CTTGCCACATTAAACTTCAG+GGG + chr3.4:83589628-83589647 MS.gene013603:intron 40.0%
GAAAGAATGGTTTAGGCTCT+TGG - chr3.4:83590754-83590773 None:intergenic 40.0%
GAAGAATCTGTTAGGAAGGT+AGG + chr3.4:83586929-83586948 MS.gene013603:CDS 40.0%
GAGATGTAATAGCGGTATAG+GGG + chr3.4:83589112-83589131 MS.gene013603:intron 40.0%
GAGGCATATTAGAGACAAGA+AGG - chr3.4:83588371-83588390 None:intergenic 40.0%
GATATTATCAGATGGGGTCT+AGG + chr3.4:83590292-83590311 MS.gene013603:CDS 40.0%
GATCAGCTCTCCTATTTACA+AGG + chr3.4:83591528-83591547 MS.gene013603:CDS 40.0%
GATTGTGTGTGGAACTTATG+TGG + chr3.4:83591472-83591491 MS.gene013603:CDS 40.0%
GCAAATCTCCAACTAGTACA+CGG - chr3.4:83591016-83591035 None:intergenic 40.0%
GGACATTACTCTCCAAAATC+GGG - chr3.4:83585923-83585942 None:intergenic 40.0%
GGTGTACTTCAAACGTAAGT+CGG + chr3.4:83589571-83589590 MS.gene013603:intron 40.0%
GGTTCATTTATCCTAGTCCA+TGG + chr3.4:83586678-83586697 MS.gene013603:CDS 40.0%
GTGATGTACAAAACCTTCTC+TGG - chr3.4:83587336-83587355 None:intergenic 40.0%
GTGTACTTCAAACGTAAGTC+GGG + chr3.4:83589572-83589591 MS.gene013603:intron 40.0%
TACTCACAGCTTACAGCAAA+GGG - chr3.4:83588430-83588449 None:intergenic 40.0%
TAGAGGCTCTATGGAAAACA+TGG + chr3.4:83588016-83588035 MS.gene013603:CDS 40.0%
TCAACCTTTCTTCTCATGCT+TGG + chr3.4:83587920-83587939 MS.gene013603:intron 40.0%
TCGCAATTGCCTAGAAATTG+CGG - chr3.4:83586975-83586994 None:intergenic 40.0%
TGAGCCAAAAAGAACATCAG+TGG - chr3.4:83586811-83586830 None:intergenic 40.0%
TGGTTCAAATAGAGGCTCTA+TGG + chr3.4:83588007-83588026 MS.gene013603:CDS 40.0%
TGTAAGCCAGCATTTCCATA+TGG - chr3.4:83589708-83589727 None:intergenic 40.0%
TGTCCTTAGATGAATACCTG+AGG - chr3.4:83590361-83590380 None:intergenic 40.0%
TTACTCTCCAAAATCGGGTA+TGG - chr3.4:83585918-83585937 None:intergenic 40.0%
TTAGTGATGAGAGGTTACCT+AGG + chr3.4:83588815-83588834 MS.gene013603:intron 40.0%
TTATACTAAGAGCTGGGAGA+CGG + chr3.4:83591174-83591193 MS.gene013603:CDS 40.0%
TTGACGGAAACTCCTTGAAA+GGG - chr3.4:83591307-83591326 None:intergenic 40.0%
! AGTTTCTTTGGTCTTTCAGG+AGG + chr3.4:83590074-83590093 MS.gene013603:intron 40.0%
! ATTCTCAGTCATGATTGGTC+AGG + chr3.4:83591097-83591116 MS.gene013603:CDS 40.0%
! CAGCTTATGATGGAAATCCT+CGG + chr3.4:83589672-83589691 MS.gene013603:CDS 40.0%
! TAACTTGCCATACCTTTGTG+AGG - chr3.4:83588233-83588252 None:intergenic 40.0%
! TAAGAAGTGCAACAGACTGT+AGG + chr3.4:83587469-83587488 MS.gene013603:intron 40.0%
! TCTGTCTTTTATGTGGAGTG+TGG + chr3.4:83587288-83587307 MS.gene013603:intron 40.0%
! TTTTCTCGCAGATGCTTGAT+AGG + chr3.4:83589817-83589836 MS.gene013603:intron 40.0%
!! AATGGTAATGGGAGAGCTTA+TGG + chr3.4:83588176-83588195 MS.gene013603:CDS 40.0%
!! ATTACCTTTGGCTTTGGATG+AGG - chr3.4:83590623-83590642 None:intergenic 40.0%
!! CTCTAAGGAACTTTTGCTCT+GGG - chr3.4:83587592-83587611 None:intergenic 40.0%
!! CTTCAAGGTATTGAAGAAGC+TGG + chr3.4:83586578-83586597 MS.gene013603:intron 40.0%
!! CTTTTACCAGCTTTGTCATG+AGG - chr3.4:83591128-83591147 None:intergenic 40.0%
!! GTGTTATTAATAGCGGATCG+CGG + chr3.4:83588459-83588478 MS.gene013603:intron 40.0%
!! TCTCTAAGGAACTTTTGCTC+TGG - chr3.4:83587593-83587612 None:intergenic 40.0%
!! TGATATGGCTAGTTTCTTGG+AGG - chr3.4:83587716-83587735 None:intergenic 40.0%
!! TGCCCACTTCATTGACTTAT+TGG + chr3.4:83590586-83590605 MS.gene013603:CDS 40.0%
!! TGCTGATATGGCTAGTTTCT+TGG - chr3.4:83587719-83587738 None:intergenic 40.0%
!!! GCAGTTTTTCTTTGAGACAC+TGG + chr3.4:83586855-83586874 MS.gene013603:CDS 40.0%
AAAGACCTCTTCCGTTTGCT+TGG + chr3.4:83586109-83586128 MS.gene013603:CDS 45.0%
AAGCAAACGGAAGAGGTCTT+TGG - chr3.4:83586110-83586129 None:intergenic 45.0%
AAGGGTCAACCCTTGTAAGA+TGG + chr3.4:83588712-83588731 MS.gene013603:intron 45.0%
AAGGTAGGAGAAGACACAAC+TGG + chr3.4:83586944-83586963 MS.gene013603:CDS 45.0%
AAGTGCAACAGACTGTAGGA+AGG + chr3.4:83587473-83587492 MS.gene013603:intron 45.0%
AATATCACCCGACGCAAACT+TGG - chr3.4:83591342-83591361 None:intergenic 45.0%
ACACTGAGATACATACCCCA+TGG - chr3.4:83586698-83586717 None:intergenic 45.0%
ACTCACAGCTTACAGCAAAG+GGG - chr3.4:83588429-83588448 None:intergenic 45.0%
ACTTAACAGGTCGGTACACT+GGG + chr3.4:83587960-83587979 MS.gene013603:intron 45.0%
AGAAAAGATAGAGGCAGAGG+CGG + chr3.4:83588791-83588810 MS.gene013603:intron 45.0%
AGATACATACCCCATGGACT+AGG - chr3.4:83586692-83586711 None:intergenic 45.0%
AGCAAGACAATACCTCAGAG+AGG + chr3.4:83591207-83591226 MS.gene013603:CDS 45.0%
AGTGCAACAGACTGTAGGAA+GGG + chr3.4:83587474-83587493 MS.gene013603:intron 45.0%
ATCTTGGCCCACAAAGGAAT+GGG - chr3.4:83590252-83590271 None:intergenic 45.0%
ATGAGAGGTTACCTAGGTTG+TGG + chr3.4:83588821-83588840 MS.gene013603:intron 45.0%
ATGCATAGCGTTCGACTGAT+GGG + chr3.4:83590535-83590554 MS.gene013603:intron 45.0%
CAATGTCAGAGACGAAGGAA+AGG - chr3.4:83591076-83591095 None:intergenic 45.0%
CACTGCAATGCGTATTAGTG+AGG + chr3.4:83590318-83590337 MS.gene013603:CDS 45.0%
CACTGGACGAAGAATCTGTT+AGG + chr3.4:83586921-83586940 MS.gene013603:CDS 45.0%
CAGATGCTTGATAGGAACTG+GGG + chr3.4:83589825-83589844 MS.gene013603:intron 45.0%
CAGCCTCAGGTATTCATCTA+AGG + chr3.4:83590355-83590374 MS.gene013603:intron 45.0%
CATGAGAAGAAAGGTTGACC+AGG - chr3.4:83587918-83587937 None:intergenic 45.0%
CCAAACCTTCTCGGAGAATA+AGG + chr3.4:83589883-83589902 MS.gene013603:CDS 45.0%
CCGAGATGTAATAGCGGTAT+AGG + chr3.4:83589110-83589129 MS.gene013603:intron 45.0%
CCTTATTCTCCGAGAAGGTT+TGG - chr3.4:83589886-83589905 None:intergenic 45.0%
CGCAATTGCCTAGAAATTGC+GGG - chr3.4:83586974-83586993 None:intergenic 45.0%
CGCTATTACATCTCGGGATT+TGG - chr3.4:83589106-83589125 None:intergenic 45.0%
CTACGCATCTTCAGTGAAAG+TGG + chr3.4:83589741-83589760 MS.gene013603:intron 45.0%
CTTGACGGAAACTCCTTGAA+AGG - chr3.4:83591308-83591327 None:intergenic 45.0%
CTTTCCTTCGTCTCTGACAT+TGG + chr3.4:83591074-83591093 MS.gene013603:CDS 45.0%
GAATCCAATGTCAGAGACGA+AGG - chr3.4:83591081-83591100 None:intergenic 45.0%
GAATCCTCATCCAAAGCCAA+AGG + chr3.4:83590616-83590635 MS.gene013603:CDS 45.0%
GCAAGGTTAAGGACAGTGTT+AGG + chr3.4:83586324-83586343 MS.gene013603:CDS 45.0%
GCAGATGCTTGATAGGAACT+GGG + chr3.4:83589824-83589843 MS.gene013603:intron 45.0%
GCATACCTTATTCTCCGAGA+AGG - chr3.4:83589891-83589910 None:intergenic 45.0%
GCTCTATGGAAAACATGGAC+AGG + chr3.4:83588021-83588040 MS.gene013603:CDS 45.0%
GCTGGACAATCATCAAATGC+AGG + chr3.4:83586002-83586021 MS.gene013603:CDS 45.0%
GCTTACAGCAAAGGGGAAAA+AGG - chr3.4:83588422-83588441 None:intergenic 45.0%
GGACGAAGAATCTGTTAGGA+AGG + chr3.4:83586925-83586944 MS.gene013603:CDS 45.0%
GGTGTTTGAAGGCAAGGTTA+AGG + chr3.4:83586313-83586332 MS.gene013603:CDS 45.0%
GTACATTTATCGTCAGCCTC+AGG + chr3.4:83590342-83590361 MS.gene013603:CDS 45.0%
GTCTTGTAGATTGACAGCCA+TGG - chr3.4:83590776-83590795 None:intergenic 45.0%
GTGGAACTTATGTGGACTCA+AGG + chr3.4:83591480-83591499 MS.gene013603:CDS 45.0%
TACTTAACAGGTCGGTACAC+TGG + chr3.4:83587959-83587978 MS.gene013603:intron 45.0%
TATATCTCGTTGCCTGCAAG+TGG + chr3.4:83586648-83586667 MS.gene013603:CDS 45.0%
TATGCATAGCGTTCGACTGA+TGG + chr3.4:83590534-83590553 MS.gene013603:intron 45.0%
TCGAGGAAAACGAGCAATAG+AGG + chr3.4:83586484-83586503 MS.gene013603:CDS 45.0%
TGACGGAAACTCCTTGAAAG+GGG - chr3.4:83591306-83591325 None:intergenic 45.0%
TGAGAGGTTACCTAGGTTGT+GGG + chr3.4:83588822-83588841 MS.gene013603:intron 45.0%
TGCGAGGATGGTTCAAATAG+AGG + chr3.4:83587999-83588018 MS.gene013603:CDS 45.0%
TGCTAGCAACCAAACCTTCT+CGG + chr3.4:83589874-83589893 MS.gene013603:CDS 45.0%
TTCAATGGAGTCGCATGAAG+AGG + chr3.4:83586082-83586101 MS.gene013603:CDS 45.0%
TTCCAGCCTCAACTCTGTAT+GGG - chr3.4:83587183-83587202 None:intergenic 45.0%
TTTCCAGCCTCAACTCTGTA+TGG - chr3.4:83587184-83587203 None:intergenic 45.0%
TTTGACATGAGGTATGGCCT+AGG + chr3.4:83588062-83588081 MS.gene013603:intron 45.0%
! ACTGGCTTCAACAGTCAGAT+TGG + chr3.4:83586873-83586892 MS.gene013603:CDS 45.0%
! GATCCTTCTTTTGCTACACC+TGG + chr3.4:83587669-83587688 MS.gene013603:intron 45.0%
! TAAGGCACCCATTCCTTTGT+GGG + chr3.4:83590242-83590261 MS.gene013603:CDS 45.0%
!! AGTTTTGCTATAGGCGGATG+AGG + chr3.4:83586289-83586308 MS.gene013603:intron 45.0%
!! CATATGTTAGGTATCGGGCT+AGG - chr3.4:83587781-83587800 None:intergenic 45.0%
!! TACAATAGGCGCCATTTTCC+TGG - chr3.4:83590948-83590967 None:intergenic 45.0%
!! TTTGAGTTGGTGATGAGGTG+AGG - chr3.4:83588859-83588878 None:intergenic 45.0%
!!! GATTGTTTTAGCTGGCCAGT+TGG - chr3.4:83590840-83590859 None:intergenic 45.0%
AAGGTTGCTCGTTCTTCGAG+GGG + chr3.4:83591499-83591518 MS.gene013603:CDS 50.0%
ACCATCCTCGCAAAAGTCAG+CGG - chr3.4:83587991-83588010 None:intergenic 50.0%
AGAGGCGGTTTAGTGATGAG+AGG + chr3.4:83588806-83588825 MS.gene013603:intron 50.0%
AGCTAAAGCCTCCTCATTGC+CGG - chr3.4:83591249-83591268 None:intergenic 50.0%
AGGCCAGGTGTAGCAAAAGA+AGG - chr3.4:83587675-83587694 None:intergenic 50.0%
ATGATTGTCCAGCGAAACGC+AGG - chr3.4:83585995-83586014 None:intergenic 50.0%
CAAGGTTGCTCGTTCTTCGA+GGG + chr3.4:83591498-83591517 MS.gene013603:CDS 50.0%
CAGGAGCTGCACATCTGTTA+GGG + chr3.4:83588649-83588668 MS.gene013603:intron 50.0%
CATATGGAGAGTTTCTGCCG+AGG - chr3.4:83589692-83589711 None:intergenic 50.0%
CATCTTGGCCCACAAAGGAA+TGG - chr3.4:83590253-83590272 None:intergenic 50.0%
CATTCCTTTGTGGGCCAAGA+TGG + chr3.4:83590251-83590270 MS.gene013603:CDS 50.0%
CGCAGATGCTTGATAGGAAC+TGG + chr3.4:83589823-83589842 MS.gene013603:intron 50.0%
CGTTTCCTCCTCCAAGCAAA+CGG - chr3.4:83586123-83586142 None:intergenic 50.0%
CGTTTGCTTGGAGGAGGAAA+CGG + chr3.4:83586121-83586140 MS.gene013603:CDS 50.0%
CTCGGCAGAAACTCTCCATA+TGG + chr3.4:83589690-83589709 MS.gene013603:CDS 50.0%
CTCGTTCTTCGAGGGGTTAA+TGG + chr3.4:83591506-83591525 MS.gene013603:CDS 50.0%
CTCTCTCTGCCCAAACCATA+TGG + chr3.4:83587623-83587642 MS.gene013603:intron 50.0%
GAGAGGTTACCTAGGTTGTG+GGG + chr3.4:83588823-83588842 MS.gene013603:intron 50.0%
GATTTCATACCCGTCCACCA+AGG - chr3.4:83586205-83586224 None:intergenic 50.0%
GCCTATTGTATTGCACTGGG+AGG + chr3.4:83590958-83590977 MS.gene013603:CDS 50.0%
GCCTCCCAGTGCAATACAAT+AGG - chr3.4:83590962-83590981 None:intergenic 50.0%
GGCGCCTATTGTATTGCACT+GGG + chr3.4:83590955-83590974 MS.gene013603:CDS 50.0%
GTAGGAGAAGACACAACTGG+AGG + chr3.4:83586947-83586966 MS.gene013603:CDS 50.0%
GTCAGAGACGAAGGAAAGGT+TGG - chr3.4:83591072-83591091 None:intergenic 50.0%
GTCTTGCCCATACAGAGTTG+AGG + chr3.4:83587174-83587193 MS.gene013603:CDS 50.0%
GTGTTTCCTCATGTGTAGCC+TGG + chr3.4:83587897-83587916 MS.gene013603:intron 50.0%
TCAAGGTTGCTCGTTCTTCG+AGG + chr3.4:83591497-83591516 MS.gene013603:CDS 50.0%
TCTCCAACTAGTACACGGAC+AGG - chr3.4:83591011-83591030 None:intergenic 50.0%
TGAGGTGGTGTTTGAAGGCA+AGG + chr3.4:83586307-83586326 MS.gene013603:CDS 50.0%
TGATTGTCCAGCGAAACGCA+GGG - chr3.4:83585994-83586013 None:intergenic 50.0%
TGGAGCTGCTTCCAGGAAAA+TGG + chr3.4:83590934-83590953 MS.gene013603:CDS 50.0%
TGGCGCCTATTGTATTGCAC+TGG + chr3.4:83590954-83590973 MS.gene013603:CDS 50.0%
TTCATGTGTCCAGAACTGGC+TGG + chr3.4:83590914-83590933 MS.gene013603:intron 50.0%
TTCTTCGTCCAGTGCAAGAG+TGG - chr3.4:83586915-83586934 None:intergenic 50.0%
TTTAGAGGCCACTCTTGCAC+TGG + chr3.4:83586904-83586923 MS.gene013603:CDS 50.0%
! AACTGGGCCATACCCGATTT+TGG + chr3.4:83585908-83585927 MS.gene013603:CDS 50.0%
! AGTGTGGATTACCTTGCGGT+TGG + chr3.4:83587304-83587323 MS.gene013603:intron 50.0%
! ATTGCACTGGGAGGCATGTT+GGG + chr3.4:83590967-83590986 MS.gene013603:CDS 50.0%
! CAGTCATGATTGGTCAGGAC+TGG + chr3.4:83591102-83591121 MS.gene013603:CDS 50.0%
! CTAAGGCACCCATTCCTTTG+TGG + chr3.4:83590241-83590260 MS.gene013603:CDS 50.0%
! GTGGAGTGTGGATTACCTTG+CGG + chr3.4:83587300-83587319 MS.gene013603:intron 50.0%
! TATTGCACTGGGAGGCATGT+TGG + chr3.4:83590966-83590985 MS.gene013603:CDS 50.0%
! TGCAGGCAAGAGAAAGCACA+AGG + chr3.4:83586019-83586038 MS.gene013603:CDS 50.0%
! TGGTAAAAGAGGAAGGGTGC+AGG + chr3.4:83591139-83591158 MS.gene013603:CDS 50.0%
! TTTGCTATAGGCGGATGAGG+TGG + chr3.4:83586292-83586311 MS.gene013603:intron 50.0%
! TTTTCCTCGACGCTGAGCTT+GGG - chr3.4:83586474-83586493 None:intergenic 50.0%
!! AGAGACAAGAAGGCGTCCTT+GGG - chr3.4:83588361-83588380 None:intergenic 50.0%
!! AGCGGTATAGGGGCACTATA+CGG + chr3.4:83589122-83589141 MS.gene013603:intron 50.0%
!! GATCGTGTTAGCATTGGCCT+TGG + chr3.4:83586185-83586204 MS.gene013603:CDS 50.0%
!! TAGAGACAAGAAGGCGTCCT+TGG - chr3.4:83588362-83588381 None:intergenic 50.0%
!! TTAGCATTGGCCTTGGTGGA+CGG + chr3.4:83586192-83586211 MS.gene013603:CDS 50.0%
!!! AAATGCCGCTGACTTTTGCG+AGG + chr3.4:83587983-83588002 MS.gene013603:CDS 50.0%
AAAGCCTCCTCATTGCCGGA+AGG - chr3.4:83591245-83591264 None:intergenic 55.0%
AAGCCTCCTCATTGCCGGAA+GGG - chr3.4:83591244-83591263 None:intergenic 55.0%
ATCTCGTTGCCTGCAAGTGG+TGG + chr3.4:83586651-83586670 MS.gene013603:CDS 55.0%
CCAACTAGTACACGGACAGG+AGG - chr3.4:83591008-83591027 None:intergenic 55.0%
CCTCCTGTCCGTGTACTAGT+TGG + chr3.4:83591005-83591024 MS.gene013603:CDS 55.0%
CTAGTACACGGACAGGAGGT+TGG - chr3.4:83591004-83591023 None:intergenic 55.0%
CTCCTCCAAGCAAACGGAAG+AGG - chr3.4:83586117-83586136 None:intergenic 55.0%
CTCTTCCGTTTGCTTGGAGG+AGG + chr3.4:83586115-83586134 MS.gene013603:CDS 55.0%
CTGGAGGTCCCGCAATTTCT+AGG + chr3.4:83586963-83586982 MS.gene013603:CDS 55.0%
CTTGATAGGAACTGGGGTGC+TGG + chr3.4:83589831-83589850 MS.gene013603:CDS 55.0%
GAACCACTACCACCACTTGC+AGG - chr3.4:83586663-83586682 None:intergenic 55.0%
GACCTCTTCCGTTTGCTTGG+AGG + chr3.4:83586112-83586131 MS.gene013603:CDS 55.0%
GATTGTCCAGCGAAACGCAG+GGG - chr3.4:83585993-83586012 None:intergenic 55.0%
GCAGGAGCTGCACATCTGTT+AGG + chr3.4:83588648-83588667 MS.gene013603:intron 55.0%
GCGGATGAGGTGGTGTTTGA+AGG + chr3.4:83586302-83586321 MS.gene013603:CDS 55.0%
GGGCAAGACCATGACTATGC+AGG - chr3.4:83587163-83587182 None:intergenic 55.0%
GGTTGACCAGGCTACACATG+AGG - chr3.4:83587906-83587925 None:intergenic 55.0%
GTCCTTGGGCACTTCCTTCA+CGG - chr3.4:83588347-83588366 None:intergenic 55.0%
TGCCCATACAGAGTTGAGGC+TGG + chr3.4:83587178-83587197 MS.gene013603:CDS 55.0%
TTGCCTGCAAGTGGTGGTAG+TGG + chr3.4:83586657-83586676 MS.gene013603:CDS 55.0%
TTGGCTGCAGGGAGACTTGA+CGG - chr3.4:83591323-83591342 None:intergenic 55.0%
! GTTTTCCTCGACGCTGAGCT+TGG - chr3.4:83586475-83586494 None:intergenic 55.0%
!! ATAGGAACTGGGGTGCTGGT+TGG + chr3.4:83589835-83589854 MS.gene013603:CDS 55.0%
!! CGTGTTAGCATTGGCCTTGG+TGG + chr3.4:83586188-83586207 MS.gene013603:CDS 55.0%
!! GACTGGCCTCATGACAAAGC+TGG + chr3.4:83591119-83591138 MS.gene013603:CDS 55.0%
!! GCGGTATAGGGGCACTATAC+CGG + chr3.4:83589123-83589142 MS.gene013603:intron 55.0%
!! TAGCATTGGCCTTGGTGGAC+GGG + chr3.4:83586193-83586212 MS.gene013603:CDS 55.0%
AACTGGCTGGAGCTGCTTCC+AGG + chr3.4:83590927-83590946 MS.gene013603:CDS 60.0%
ACGGACAGGAGGTTGGCGAA+GGG - chr3.4:83590997-83591016 None:intergenic 60.0%
AGGCTCTCATTCCGCCCTTC+CGG + chr3.4:83591227-83591246 MS.gene013603:CDS 60.0%
AGTTCCCAAGCTCAGCGTCG+AGG + chr3.4:83586467-83586486 MS.gene013603:CDS 60.0%
ATGGCGAGTAGTCCCGTCGA+TGG + chr3.4:83590270-83590289 MS.gene013603:CDS 60.0%
ATTCCGCCCTTCCGGCAATG+AGG + chr3.4:83591235-83591254 MS.gene013603:CDS 60.0%
CCCTGCAGCCAAGTTTGCGT+CGG + chr3.4:83591331-83591350 MS.gene013603:CDS 60.0%
CCGACGCAAACTTGGCTGCA+GGG - chr3.4:83591334-83591353 None:intergenic 60.0%
CCTGCAGCCAAGTTTGCGTC+GGG + chr3.4:83591332-83591351 MS.gene013603:CDS 60.0%
CTCGCCATCTTGGCCCACAA+AGG - chr3.4:83590258-83590277 None:intergenic 60.0%
GAAGCAGCTCCAGCCAGTTC+TGG - chr3.4:83590926-83590945 None:intergenic 60.0%
GACGGGACTACTCGCCATCT+TGG - chr3.4:83590268-83590287 None:intergenic 60.0%
GCGGAATGAGAGCCTCTCTG+AGG - chr3.4:83591222-83591241 None:intergenic 60.0%
TCCAGCGAAACGCAGGGGAA+CGG - chr3.4:83585988-83586007 None:intergenic 60.0%
! CGGTTGGCTGATCCCAGAGA+AGG + chr3.4:83587320-83587339 MS.gene013603:intron 60.0%
! TCTGGGATCAGCCAACCGCA+AGG - chr3.4:83587318-83587337 None:intergenic 60.0%
!! GACCGTGAAGGAAGTGCCCA+AGG + chr3.4:83588342-83588361 MS.gene013603:intron 60.0%
!!! GCCGCTGACTTTTGCGAGGA+TGG + chr3.4:83587987-83588006 MS.gene013603:CDS 60.0%
CACGGACAGGAGGTTGGCGA+AGG - chr3.4:83590998-83591017 None:intergenic 65.0%
CCAGCGAAACGCAGGGGAAC+GGG - chr3.4:83585987-83586006 None:intergenic 65.0%
CCCGACGCAAACTTGGCTGC+AGG - chr3.4:83591335-83591354 None:intergenic 65.0%
CCTCCTCATTGCCGGAAGGG+CGG - chr3.4:83591241-83591260 None:intergenic 65.0%
CCCGTTCCCCTGCGTTTCGC+TGG + chr3.4:83585984-83586003 MS.gene013603:CDS 70.0%
CCGCCCTTCCGGCAATGAGG+AGG + chr3.4:83591238-83591257 MS.gene013603:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 83585894 83591580 83585894 ID=MS.gene013603
chr3.4 mRNA 83585894 83591580 83585894 ID=MS.gene013603.t1;Parent=MS.gene013603
chr3.4 exon 83585894 83586214 83585894 ID=MS.gene013603.t1.exon1;Parent=MS.gene013603.t1
chr3.4 CDS 83585894 83586214 83585894 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83586302 83586345 83586302 ID=MS.gene013603.t1.exon2;Parent=MS.gene013603.t1
chr3.4 CDS 83586302 83586345 83586302 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83586427 83586505 83586427 ID=MS.gene013603.t1.exon3;Parent=MS.gene013603.t1
chr3.4 CDS 83586427 83586505 83586427 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83586585 83586701 83586585 ID=MS.gene013603.t1.exon4;Parent=MS.gene013603.t1
chr3.4 CDS 83586585 83586701 83586585 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83586848 83587030 83586848 ID=MS.gene013603.t1.exon5;Parent=MS.gene013603.t1
chr3.4 CDS 83586848 83587030 83586848 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83587152 83587238 83587152 ID=MS.gene013603.t1.exon6;Parent=MS.gene013603.t1
chr3.4 CDS 83587152 83587238 83587152 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83587969 83588072 83587969 ID=MS.gene013603.t1.exon7;Parent=MS.gene013603.t1
chr3.4 CDS 83587969 83588072 83587969 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83588152 83588239 83588152 ID=MS.gene013603.t1.exon8;Parent=MS.gene013603.t1
chr3.4 CDS 83588152 83588239 83588152 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83589648 83589728 83589648 ID=MS.gene013603.t1.exon9;Parent=MS.gene013603.t1
chr3.4 CDS 83589648 83589728 83589648 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83589828 83589904 83589828 ID=MS.gene013603.t1.exon10;Parent=MS.gene013603.t1
chr3.4 CDS 83589828 83589904 83589828 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83590228 83590363 83590228 ID=MS.gene013603.t1.exon11;Parent=MS.gene013603.t1
chr3.4 CDS 83590228 83590363 83590228 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83590575 83590637 83590575 ID=MS.gene013603.t1.exon12;Parent=MS.gene013603.t1
chr3.4 CDS 83590575 83590637 83590575 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
chr3.4 exon 83590927 83591580 83590927 ID=MS.gene013603.t1.exon13;Parent=MS.gene013603.t1
chr3.4 CDS 83590927 83591580 83590927 ID=cds.MS.gene013603.t1;Parent=MS.gene013603.t1
Gene Sequence

>MS.gene013603

ATGGCACTTTGTAGAACTGGGCCATACCCGATTTTGGAGAGTAATGTCCTAGCTTATTCACATATAAATTTGTCGACAAGGCTTGTTTTACCCGTTCCCCTGCGTTTCGCTGGACAATCATCAAATGCAGGCAAGAGAAAGCACAAGGTAATATGCAGTTCTTCACTACGGAGATCTGCATCTGCTTCTTCAATGGAGTCGCATGAAGAGGTTCCAAAGACCTCTTCCGTTTGCTTGGAGGAGGAAACGGATCATGTTATGAGGTTCAAAATGTCAGACTTTAAGGTTTTAGATCGTGTTAGCATTGGCCTTGGTGGACGGGTATGAAATCTAAATAACTTTACGATGTGTCATGACTGGATTAATTTTTTTAATTCCGGTGGTCTCATCGATTAAGTTTTGCTATAGGCGGATGAGGTGGTGTTTGAAGGCAAGGTTAAGGACAGTGTTAGGTAAGATAATTCTTTGTCCGTTCAGGTTACATGATGAGTTTTGATCACAGTATCTGTATTTATTTGTTCTGTTCTCTGCAGCCCTTTGTATAACACAAGAGTTATACTTCGACAGCTTTATAGTTCCCAAGCTCAGCGTCGAGGAAAACGAGCAATAGAGGTATGTTGACATTGTTTGTAGTATCTCAATTTAATTTTGTTCATGCCCCTTTTCACAATATTTTGTTGGTATCTTCAAGGTATTGAAGAAGCTGGGTCGCCGTAAACTTTTGTATCATTCTTACTCAATGCAAGTTCATGGCTATATCTCGTTGCCTGCAAGTGGTGGTAGTGGTTCATTTATCCTAGTCCATGGGGTATGTATCTCAGTGTGTTTCATTATTTTAATTTCATACATGTTTGATTATATCCTGCTCTGAATGTTGTCTATTTGAGTATTTCTGCCCCTTTGCATAAAAAGAACCACTGATGTTCTTTTTGGCTCAATACATTTTCCTATCAGTATCATGGCAGTTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCAAACTTTAGAGGCCACTCTTGCACTGGACGAAGAATCTGTTAGGAAGGTAGGAGAAGACACAACTGGAGGTCCCGCAATTTCTAGGCAATTGCGACTAATTCGAATATTGATGAGAGATCTTCTAATTGGAGTATGTCTTTAGAAGTTTTAACCTTAATGTTTTCTGGAAGACATTTTTAACCATAAGTGCTTGAATACTTGCACAGCAACATGAGGAGTGATATTTTCTACAATGGTTTATTTACTTTCAGGTTAATTACCTGCATAGTCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGACATATCAAAGTAAGCATTGTCATTCTCTTATAAACAGAATCACGTCTTCATTCATTTTTCTGTCTTTTATGTGGAGTGTGGATTACCTTGCGGTTGGCTGATCCCAGAGAAGGTTTTGTACATCACGTGTGCTGTAAACTCAGAACATCACAAAATTAGAAATTTGTTTTTGTTGATAGTTTGAACATTTCGGTTGTTTCACATAATAGCAAACAGTTATCCTAAGATAGAAAACCTGATAAGAAGTGCAACAGACTGTAGGAAGGGAAAGATAACAGATAAGATATATGATGATAGAACCCAAAATATCAAGGTAATGAATTGAAAAGAATTATTACAGAGATGGAAATCCCTATAATCCCAGAGCAAAAGTTCCTTAGAGAAGAGACATTTCTCTCTCTGCCCAAACCATATGGTTTCTAACTGAATAATACTCAATGATCCTTCTTTTGCTACACCTGGCCTTCATATAACTGTCATTTTCCTCCAAGAAACTAGCCATATCAGCAAATATAACAAACTCTATTTAGCACATTTTTGGGCTTAGGCCTAGCCCGATACCTAACATATGACATATACTTTCTGGTTGATGATTTTCACTGGGCTGATAATTCTTAGCTCTCAATGTGTGAACTACGTAATCAAAGTTACTGTACACCAATAGTTGGTGTTTCCTCATGTGTAGCCTGGTCAACCTTTCTTCTCATGCTTGGTTTGACCTGAAGTGTTTACTTAACAGGTCGGTACACTGGGAAATGCCGCTGACTTTTGCGAGGATGGTTCAAATAGAGGCTCTATGGAAAACATGGACAGGCGACAGATGATGATTGCATTTGACATGAGGTATGGCCTAGGATATCGTTTGTGAAGTTTGTGTGCAACTATATAATCTTTTTGATAACTGATTATCTGTGTTACAAAGATGCATGGGTTTTATAATGGCAAAAATGGTAATGGGAGAGCTTATGGATCCTTTGATATTCGCAAAGTTCAAATCATTCCTCACAAAGGTATGGCAAGTTAATATTGTATTTAATTTTGGCCCCTTGACTGTTTAAAAGTATGACTTTTTAGAAGGAAAAGAAAAAACTACCTGACTCAAATGCTTTATAGACCGTGAAGGAAGTGCCCAAGGACGCCTTCTTGTCTCTAATATGCCTCATACAAACTAAGGCCTAAATAATTTGTTCCTTTTTCCCCTTTGCTGTAAGCTGTGAGTATTCATTTTAGTGTTATTAATAGCGGATCGCGGAAAATAGCAGATAGCAAAAAATCTGATATGAGAAATAGGGTATAACATAGCGAGCAAATAGCAGTAGCCACAAAGCGGTTGAAATAAATAATTATATATAAAATAAAGCATGATGTACATAATCATCTCTCAATCCCTCAAAAACCTACAAGTTAGAGGTTAATTAGCAGGAGCTGCACATCTGTTAGGGCATTAGAGATTAATATGCAACAACCGATTGTCTTAGATGTAAGGGTCAACCCTTGTAAGATGGTTTATATATAAAAATAATGCCAGAAACATAAATTAAATATGAAGTATGAAGTGAAGAGAAAAGATAGAGGCAGAGGCGGTTTAGTGATGAGAGGTTACCTAGGTTGTGGGGTTATATAAAACCTCACCTCATCACCAACTCAAAATTATTTTATTTTTGATGTTTTAAAAAATATGTCACGTCTTCTTTAAAAAAAAGAAAGTCACGTGCAGTTCACATGATATTTTTGATGTTATCATAAGGGAAAAAAGCATACAAAAAAACTTCCGATATGTAAGAAATAATCGCTATCGCCGATATGCAAAAAGTCACTGCTATTGCAGTGGTAGCGAAATGACAATAACATATCGGCTTTTGTCGCAGTTGCTCCAAATCCCGAGATGTAATAGCGGTATAGGGGCACTATACGGTTATTTAACAACAAATCCCGAGATGTAATAGCGGTATAGGGGCACTATACCGGTTATTTAACAACACTTCATTTATAGCAGGACATAAACCATTATCATGAAAATTTGAAGATTCTGCTGTTGAAATAAGTAGTCATTTGAGAATAATACTAAATTAATGGTTAAGTCACGTGGCCATGATCTGTAGTAGTTTACTTGGGAAAGACTATTTGTAGGTCTACTGTAAGTGGACACTCATCCTCATTATTTTATTACATTTCTGGTATTAGCATAATAAATATTATTTCGTAGTAGAACTGATAATTCAAATTACACGTGGAAACAAGTCACGATATATAAGGAAGTGTTGAAACCAATACTAAAAGATAATCATAGTTACCCTAACAAATGTAGGTATGTTGATATATTCTAACAAATATGTAGACAGGTGTACTTCAAACGTAAGTCGGGTCATGCAATGATGCAAATTTTCTAACGATAATTCTTGCCACATTAAACTTCAGGGGAATGATCCTTCATGTTTGCGACAGCTTATGATGGAAATCCTCGGCAGAAACTCTCCATATGGAAATGCTGGCTTACAAGTAAGTATATTTCTACGCATCTTCAGTGAAAGTGGCTTAGTATTTAGAGTACCATTTTTGTTTTCATAACTTTTAATGCCTTATATTATTTTCTCGCAGATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTCTATTGCTAGCAACCAAACCTTCTCGGAGAATAAGGTATGCTTCAAAGCAGTATCTACATATTTGAAATTTTAATAATTTGCTTATTGATTCCCCTACATTGAGCTGTTTATCTTGCAAATATGTCAAGATTTTAAAAATTAAAACTGTAGCGTTGAAGAAAATTCAGCAGAGATACAAAAAAAATCATAAAGAGAAGTGTTCAAGTTTCTTTGGTCTTTCAGGAGGCTTGATCTTTTGACAACATGTAGCTAGTTTCTGACAATTGTGAACCATGAATAGCATTTGATTAGATATATTAGTTTGATTTACCCAAGATTGAAAAATTGCTGGTGTTAACCATGTGAAATGTTCTACAGTTGTTTGGATGCTCTAAGGCACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTCCCGTCGATGGATATTATCAGATGGGGTCTAGGTTGCACTGCAATGCGTATTAGTGAGGAGTACATTTATCGTCAGCCTCAGGTATTCATCTAAGGACAGCCCATACACGCAATGTGTTTCTGTTACATTTTGAGTACCTTGTGCTTATATAAGACATTTTTATATATTTGTTGATGACTGATGTCCTCGAGTTTTTCCTTAATAATAAGGTTACATTTGTATATTGAAATTACATTATTAAATGCTGTAGATATGCATAGCGTTCGACTGATGGGTGTTTTCTATGTTTTAGCGCAGTAGGCTTGCCCACTTCATTGACTTATTGGAGATGTTGAATCCTCATCCAAAGCCAAAGGTAATTCATGAGTAAAAACTTTCTCGTATAATTTTCCTAGTATTGTTTCTTCTACAATGATTTTCTTTGAAATAGTTCTATTTCTTCAATCACTAAAATAAAGTACTTAATGCCCAAGAGCCTAAACCATTCTTTCCATGGCTGTCAATCTACAAGACGTGATTCATGAAAAAGTCATCATTGCAAGTTCACAATTAATCCAACTGGCCAGCTAAAACAATCACCAAAACAGTCACAAATTTTAATGTTAATGTATTGCCAACTTATATGCCATTATTCATGTGTCCAGAACTGGCTGGAGCTGCTTCCAGGAAAATGGCGCCTATTGTATTGCACTGGGAGGCATGTTGGGCTGACCCTTCGCCAACCTCCTGTCCGTGTACTAGTTGGAGATTTGCATTTAACTGTTAGTAGAGAATCAAAGTTGAAGGCCAACCTTTCCTTCGTCTCTGACATTGGATTCTCAGTCATGATTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAAAGAGGAAGGGTGCAGGTGAATTCTTCATTTATACTAAGAGCTGGGAGACGGTTATATCTGAAGCAAGACAATACCTCAGAGAGGCTCTCATTCCGCCCTTCCGGCAATGAGGAGGCTTTAGCTCAGAAATTTTCTAGCAAGAAATGGAGAAAAATAACCCCTTTCAAGGAGTTTCCGTCAAGTCTCCCTGCAGCCAAGTTTGCGTCGGGTGATATTGATGTGACAATGAATCTTGATGATCCTTTAGATCAAAACATTGATACTGTTCAAAATGTTCTTCAAGAACTAAGAACACAAATTCCCCCTGAAATATTTGATTTGTCAAAGATTGTGTGTGGAACTTATGTGGACTCAAGGTTGCTCGTTCTTCGAGGGGTTAATGGATCAGCTCTCCTATTTACAAGGTCTTTTGTGGACACAGACAGTTCTAGTTAA
Protein sequence

>MS.gene013603.t1

MALCRTGPYPILESNVLAYSHINLSTRLVLPVPLRFAGQSSNAGKRKHKVICSSSLRRSASASSMESHEEVPKTSSVCLEEETDHVMRFKMSDFKVLDRVSIGLGGRADEVVFEGKVKDSVSPLYNTRVILRQLYSSQAQRRGKRAIEVLKKLGRRKLLYHSYSMQVHGYISLPASGGSGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEESVRKVGEDTTGGPAISRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGTLGNAADFCEDGSNRGSMENMDRRQMMIAFDMRCMGFIMAKMVMGELMDPLIFAKFKSFLTKGNDPSCLRQLMMEILGRNSPYGNAGLQMLDRNWGAGWHLLSLLLATKPSRRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGCTAMRISEEYIYRQPQRSRLAHFIDLLEMLNPHPKPKNWLELLPGKWRLLYCTGRHVGLTLRQPPVRVLVGDLHLTVSRESKLKANLSFVSDIGFSVMIGQDWPHDKAGKRGRVQVNSSFILRAGRRLYLKQDNTSERLSFRPSGNEEALAQKFSSKKWRKITPFKEFPSSLPAAKFASGDIDVTMNLDDPLDQNIDTVQNVLQELRTQIPPEIFDLSKIVCGTYVDSRLLVLRGVNGSALLFTRSFVDTDSSS