Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013625.t1 | PNX73002.1 | 48.1 | 799 | 122 | 7 | 54 | 593 | 1 | 765 | 2.20E-179 | 639 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013625.t1 | Q9SZL8 | 32.6 | 221 | 132 | 6 | 54 | 259 | 77 | 295 | 5.2e-20 | 100.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013625.t1 | A0A2K3L384 | 48.1 | 799 | 122 | 7 | 54 | 593 | 1 | 765 | 1.6e-179 | 639.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene013625.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013625.t1 | MTR_0645s0010 | 97.561 | 82 | 2 | 0 | 252 | 333 | 44 | 125 | 1.71e-47 | 162 |
| MS.gene013625.t1 | MTR_7g446520 | 40.952 | 210 | 109 | 1 | 43 | 252 | 81 | 275 | 5.22e-44 | 160 |
| MS.gene013625.t1 | MTR_7g446480 | 48.062 | 129 | 67 | 0 | 124 | 252 | 140 | 268 | 1.04e-32 | 128 |
| MS.gene013625.t1 | MTR_7g446510 | 45.926 | 135 | 73 | 0 | 118 | 252 | 149 | 283 | 2.63e-31 | 125 |
| MS.gene013625.t1 | MTR_7g028855 | 43.046 | 151 | 83 | 1 | 43 | 190 | 113 | 263 | 3.07e-30 | 124 |
| MS.gene013625.t1 | MTR_1g070355 | 32.031 | 256 | 156 | 6 | 6 | 252 | 31 | 277 | 2.36e-28 | 120 |
| MS.gene013625.t1 | MTR_5g076070 | 28.796 | 191 | 130 | 2 | 25 | 209 | 25 | 215 | 1.81e-24 | 103 |
| MS.gene013625.t1 | MTR_4g035820 | 30.233 | 258 | 156 | 8 | 8 | 252 | 36 | 282 | 2.86e-21 | 98.6 |
| MS.gene013625.t1 | MTR_6g022080 | 28.070 | 171 | 120 | 1 | 42 | 209 | 77 | 247 | 1.03e-20 | 92.4 |
| MS.gene013625.t1 | MTR_0402s0040 | 34.682 | 173 | 108 | 5 | 54 | 223 | 30 | 200 | 3.33e-20 | 94.7 |
| MS.gene013625.t1 | MTR_8g035530 | 51.429 | 70 | 34 | 0 | 41 | 110 | 5 | 74 | 1.89e-18 | 80.5 |
| MS.gene013625.t1 | MTR_3g080590 | 43.820 | 89 | 48 | 1 | 12 | 100 | 69 | 155 | 1.30e-16 | 77.8 |
| MS.gene013625.t1 | MTR_6g051425 | 27.149 | 221 | 134 | 8 | 58 | 257 | 25 | 239 | 1.09e-14 | 76.3 |
| MS.gene013625.t1 | MTR_1g008290 | 30.065 | 153 | 94 | 4 | 90 | 242 | 1 | 140 | 4.49e-14 | 70.5 |
| MS.gene013625.t1 | MTR_5g015480 | 34.959 | 123 | 72 | 5 | 54 | 171 | 60 | 179 | 1.15e-13 | 72.0 |
| MS.gene013625.t1 | MTR_3g450850 | 28.708 | 209 | 136 | 6 | 56 | 252 | 53 | 260 | 3.00e-12 | 68.9 |
| MS.gene013625.t1 | MTR_8g468460 | 39.583 | 96 | 56 | 2 | 252 | 346 | 11 | 105 | 5.41e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013625.t1 | AT4G38180 | 31.674 | 221 | 136 | 4 | 53 | 259 | 76 | 295 | 7.15e-22 | 100 |
| MS.gene013625.t1 | AT4G38180 | 27.835 | 194 | 125 | 5 | 210 | 391 | 448 | 638 | 4.60e-11 | 66.6 |
| MS.gene013625.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 1.98e-17 | 86.7 |
| MS.gene013625.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 1.98e-17 | 86.7 |
| MS.gene013625.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 2.06e-17 | 86.7 |
| MS.gene013625.t1 | AT5G28530 | 27.941 | 204 | 136 | 5 | 56 | 254 | 61 | 258 | 2.51e-17 | 86.3 |
| MS.gene013625.t1 | AT5G28530 | 27.941 | 204 | 136 | 5 | 56 | 254 | 61 | 258 | 2.54e-17 | 86.3 |
| MS.gene013625.t1 | AT1G10240 | 30.151 | 199 | 131 | 6 | 56 | 247 | 54 | 251 | 1.01e-15 | 81.3 |
| MS.gene013625.t1 | AT1G10240 | 30.151 | 199 | 131 | 6 | 56 | 247 | 54 | 251 | 1.01e-15 | 81.3 |
| MS.gene013625.t1 | AT3G07500 | 32.749 | 171 | 89 | 7 | 54 | 213 | 37 | 192 | 6.30e-13 | 68.9 |
| MS.gene013625.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 3.01e-11 | 67.0 |
| MS.gene013625.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 3.01e-11 | 67.0 |
| MS.gene013625.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 3.01e-11 | 67.0 |
| MS.gene013625.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 3.01e-11 | 67.0 |
| MS.gene013625.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 3.01e-11 | 67.0 |
| MS.gene013625.t1 | AT4G38170 | 26.316 | 190 | 125 | 5 | 210 | 387 | 213 | 399 | 4.02e-11 | 66.2 |
Find 117 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATATTAACTGTAATATT+TGG | 0.204657 | 3.4:+83268772 | None:intergenic |
| TTCATTTGATTCCGAATTAT+AGG | 0.217986 | 3.4:-83270936 | MS.gene013625:CDS |
| TTCCTCATTATGACCTTCTT+TGG | 0.219846 | 3.4:+83269568 | None:intergenic |
| ATGATTTCATTCAGAAGATT+TGG | 0.259205 | 3.4:-83271014 | MS.gene013625:CDS |
| AATGTCTATATTTGTTGTTT+TGG | 0.267598 | 3.4:+83268819 | None:intergenic |
| TCATATACTAGGTTTCTTAA+TGG | 0.276146 | 3.4:-83270851 | MS.gene013625:CDS |
| TTCAGTAGTGATAATGGTTT+TGG | 0.283086 | 3.4:-83271345 | MS.gene013625:CDS |
| CATGATGTTGATAATATCTT+TGG | 0.283165 | 3.4:-83268904 | MS.gene013625:CDS |
| AGAAGAATGAAGATAGTAAT+AGG | 0.287511 | 3.4:-83271080 | MS.gene013625:CDS |
| GGAATCAAATGAACAAGATT+TGG | 0.296397 | 3.4:+83270946 | None:intergenic |
| TCACTCAATTTCCTATAATT+CGG | 0.322105 | 3.4:+83270925 | None:intergenic |
| CATATACTAGGTTTCTTAAT+GGG | 0.328869 | 3.4:-83270850 | MS.gene013625:CDS |
| GGTTTCTTAATGGGCCAAAA+AGG | 0.332076 | 3.4:-83270841 | MS.gene013625:CDS |
| GTAGAATTCAGTAGTGATAA+TGG | 0.335573 | 3.4:-83271351 | MS.gene013625:CDS |
| ACTTAGTTCATGGTTGTGAT+TGG | 0.360489 | 3.4:+83270972 | None:intergenic |
| GAAGTTAATCCACCCACATT+TGG | 0.365859 | 3.4:+83268554 | None:intergenic |
| CACTTACCGCTGCATTCAAT+AGG | 0.379313 | 3.4:-83269520 | MS.gene013625:CDS |
| CTTAGTTCATGGTTGTGATT+GGG | 0.381070 | 3.4:+83270973 | None:intergenic |
| GAGTTTACCTTTACAGATGA+TGG | 0.397514 | 3.4:-83270673 | MS.gene013625:CDS |
| TAACAATGCCATTGATTATG+AGG | 0.400069 | 3.4:-83269480 | MS.gene013625:CDS |
| AAAGTTCCTAGAAGTCAAAA+AGG | 0.400507 | 3.4:-83269876 | MS.gene013625:CDS |
| GTGTTGACAACTTCCTTGCC+TGG | 0.404467 | 3.4:-83269935 | MS.gene013625:CDS |
| CATTTGGTACTGACATAGAA+TGG | 0.405927 | 3.4:+83268932 | None:intergenic |
| CTACAGACATAATGAATTGT+TGG | 0.407345 | 3.4:-83269987 | MS.gene013625:CDS |
| AATCTTCTGAATGAAATCAT+AGG | 0.410758 | 3.4:+83271017 | None:intergenic |
| AAAGGAGGACATGAAAATCT+TGG | 0.412933 | 3.4:-83270823 | MS.gene013625:CDS |
| AAATGTCAATGGCAACAATA+AGG | 0.413929 | 3.4:-83269402 | MS.gene013625:intron |
| GATTTGGAGGACTTAGTTCA+TGG | 0.422475 | 3.4:+83270962 | None:intergenic |
| AACAACATTCCTTTGTATCC+TGG | 0.428695 | 3.4:-83268491 | MS.gene013625:CDS |
| TCGGATAAACAGATTGTTAG+TGG | 0.430560 | 3.4:-83270901 | MS.gene013625:CDS |
| TAACATACACTATTTGTTCC+AGG | 0.434470 | 3.4:+83268473 | None:intergenic |
| AAAGCGTATGCTCGTTTCCA+TGG | 0.435800 | 3.4:-83271204 | MS.gene013625:CDS |
| ACAGTTTACGAGCGTGTTGA+AGG | 0.436704 | 3.4:-83268372 | MS.gene013625:intron |
| CAAGGAAGGGTTAGAATTGA+AGG | 0.441504 | 3.4:-83270763 | MS.gene013625:CDS |
| TCAACATCATGTCTACCATT+TGG | 0.448971 | 3.4:+83268916 | None:intergenic |
| CATTGATTATGAGGAAGCTT+TGG | 0.458582 | 3.4:-83269471 | MS.gene013625:CDS |
| CTCATTATGACCTTCTTTGG+AGG | 0.460106 | 3.4:+83269571 | None:intergenic |
| AATAGGCAAACCATGCGAAC+TGG | 0.460478 | 3.4:-83271063 | MS.gene013625:CDS |
| AAAGTCTAATTTGCAAAAGA+TGG | 0.463829 | 3.4:-83269631 | MS.gene013625:CDS |
| GTTAGTGGTTTGCATTCTCA+AGG | 0.476835 | 3.4:-83270886 | MS.gene013625:CDS |
| ATGCTGAGTTGCTTCACTAT+AGG | 0.481546 | 3.4:+83271395 | None:intergenic |
| GCGATTACTTTGCAATAAAG+AGG | 0.481547 | 3.4:-83271124 | MS.gene013625:CDS |
| AAGAGAGATGGCGACAAAGC+CGG | 0.482060 | 3.4:-83268871 | MS.gene013625:CDS |
| GTTTCCATGGGTTTGTCGTA+AGG | 0.482758 | 3.4:-83271191 | MS.gene013625:CDS |
| GGGTTTCATCATTCATGTCA+TGG | 0.487067 | 3.4:+83268953 | None:intergenic |
| ATTTGGTACTGACATAGAAT+GGG | 0.493491 | 3.4:+83268933 | None:intergenic |
| CAAAGCTTCCTCATAATCAA+TGG | 0.494233 | 3.4:+83269472 | None:intergenic |
| GAAGCTTCACGCTCAAATCC+AGG | 0.499670 | 3.4:+83269917 | None:intergenic |
| TCATCATTTGCCTCCAAAGA+AGG | 0.501389 | 3.4:-83269581 | MS.gene013625:CDS |
| CAAGATGGAACCATGGTGTT+GGG | 0.503043 | 3.4:-83268622 | MS.gene013625:CDS |
| AAATGATGATATAAAAGCTA+TGG | 0.514775 | 3.4:-83271262 | MS.gene013625:CDS |
| GTCACTCACCATGCTGAGGT+TGG | 0.515437 | 3.4:-83269827 | MS.gene013625:CDS |
| TTATAGGAAATTGAGTGAAT+CGG | 0.515530 | 3.4:-83270920 | MS.gene013625:CDS |
| AAGGAAGGATGATGTGGTAA+AGG | 0.518755 | 3.4:-83271172 | MS.gene013625:CDS |
| CCATGGGTTTGTCGTAAGGA+AGG | 0.524385 | 3.4:-83271187 | MS.gene013625:CDS |
| CGTCGTGAGGGAAATGTCAA+TGG | 0.525065 | 3.4:-83269413 | MS.gene013625:CDS |
| TGCCACATGGATTTGCAAGA+TGG | 0.527779 | 3.4:-83268637 | MS.gene013625:CDS |
| GTAAGAACCTGTCATATACT+AGG | 0.532163 | 3.4:-83270862 | MS.gene013625:CDS |
| GATTATGAGGAAGCTTTGGA+AGG | 0.532969 | 3.4:-83269467 | MS.gene013625:CDS |
| TAACCGACCATCATCTGTAA+AGG | 0.533842 | 3.4:+83270666 | None:intergenic |
| AAATGGTCATGTTCCGCCGA+TGG | 0.535969 | 3.4:-83269544 | MS.gene013625:CDS |
| ATCAAATGAACAAGATTTGG+AGG | 0.541540 | 3.4:+83270949 | None:intergenic |
| AATGGTCATGTTCCGCCGAT+GGG | 0.542538 | 3.4:-83269543 | MS.gene013625:CDS |
| AAGCGTATGCTCGTTTCCAT+GGG | 0.546934 | 3.4:-83271203 | MS.gene013625:CDS |
| ACTTCATGACAGAAATAATG+TGG | 0.547790 | 3.4:+83269678 | None:intergenic |
| CCACCGTACACAGGAAAAGC+GGG | 0.548539 | 3.4:+83268581 | None:intergenic |
| TAAGAAACCTAGTATATGAC+AGG | 0.549198 | 3.4:+83270855 | None:intergenic |
| CATTCTATGTCAGTACCAAA+TGG | 0.549713 | 3.4:-83268931 | MS.gene013625:CDS |
| GGTATTAAACGTAAGAGAGA+TGG | 0.550783 | 3.4:-83268883 | MS.gene013625:CDS |
| ACAGAAATAATGTGGGAACA+TGG | 0.568395 | 3.4:+83269686 | None:intergenic |
| AGCAAGACATCCAGTTCGCA+TGG | 0.572129 | 3.4:+83271053 | None:intergenic |
| GCAAGATGGAACCATGGTGT+TGG | 0.572620 | 3.4:-83268623 | MS.gene013625:CDS |
| AACCATGGTGTTGGGTATGT+TGG | 0.578818 | 3.4:-83268614 | MS.gene013625:CDS |
| ATTATGAGGAAGCTTTGGAA+GGG | 0.579688 | 3.4:-83269466 | MS.gene013625:CDS |
| CGATTACTTTGCAATAAAGA+GGG | 0.582695 | 3.4:-83271123 | MS.gene013625:CDS |
| GGAATGTTGTTATAATGTGA+TGG | 0.585101 | 3.4:+83268503 | None:intergenic |
| ATTTGGAGTCACAGAAGCAT+CGG | 0.589265 | 3.4:+83268789 | None:intergenic |
| GTACGGTGGGATTCCAAATG+TGG | 0.589315 | 3.4:-83268567 | MS.gene013625:CDS |
| AAGATAAATGTACGTCGTGA+GGG | 0.589836 | 3.4:-83269425 | MS.gene013625:CDS |
| GGCAAGGAAGTTGTCAACAC+AGG | 0.590629 | 3.4:+83269938 | None:intergenic |
| TGCATTCAATAGGCTTTGTG+AGG | 0.594478 | 3.4:-83269510 | MS.gene013625:CDS |
| TATAACTACACTGATCATCA+AGG | 0.599053 | 3.4:-83270781 | MS.gene013625:CDS |
| CTCCAAAGAAGGTCATAATG+AGG | 0.600558 | 3.4:-83269570 | MS.gene013625:CDS |
| CAAGATAAATGTACGTCGTG+AGG | 0.601675 | 3.4:-83269426 | MS.gene013625:CDS |
| ACTACACTGATCATCAAGGA+AGG | 0.601680 | 3.4:-83270777 | MS.gene013625:CDS |
| TGTGATGGAAGGATGTCTGC+TGG | 0.601718 | 3.4:+83268518 | None:intergenic |
| CAGCGGTAAGTGCCCATCGG+CGG | 0.602402 | 3.4:+83269531 | None:intergenic |
| CACTATTTCCAACCTCAGCA+TGG | 0.602509 | 3.4:+83269819 | None:intergenic |
| TACGGTGGGATTCCAAATGT+GGG | 0.603843 | 3.4:-83268566 | MS.gene013625:CDS |
| CCCACCGTACACAGGAAAAG+CGG | 0.608963 | 3.4:+83268580 | None:intergenic |
| TTCACGCTCAAATCCAGGCA+AGG | 0.610482 | 3.4:+83269922 | None:intergenic |
| TACGAGCGTGTTGAAGGACA+TGG | 0.612523 | 3.4:-83268366 | MS.gene013625:CDS |
| TTGTAGAATGGTATGCCACA+TGG | 0.614759 | 3.4:-83268650 | MS.gene013625:intron |
| ATCTGTCACTCACCATGCTG+AGG | 0.616402 | 3.4:-83269831 | MS.gene013625:CDS |
| TGTCGTAAGGAAGGATGATG+TGG | 0.617262 | 3.4:-83271178 | MS.gene013625:CDS |
| AGAAAGACAGAAAATTGCAA+TGG | 0.617630 | 3.4:-83271309 | MS.gene013625:CDS |
| CTATTTGTTCCAGGATACAA+AGG | 0.622428 | 3.4:+83268482 | None:intergenic |
| TGTTGTTATAATGTGATGGA+AGG | 0.624294 | 3.4:+83268507 | None:intergenic |
| CCTTCCTTACGACAAACCCA+TGG | 0.631542 | 3.4:+83271187 | None:intergenic |
| TTACCTTTACAGATGATGGT+CGG | 0.632472 | 3.4:-83270669 | MS.gene013625:intron |
| CTTCATGACAGAAATAATGT+GGG | 0.634223 | 3.4:+83269679 | None:intergenic |
| TTTGGAATCCCACCGTACAC+AGG | 0.642001 | 3.4:+83268572 | None:intergenic |
| TCTCGATAATGATACTGTAG+AGG | 0.643267 | 3.4:-83271373 | MS.gene013625:CDS |
| ATGCAGCGGTAAGTGCCCAT+CGG | 0.647794 | 3.4:+83269528 | None:intergenic |
| TGTCATGAAGTATGAGAACA+TGG | 0.649925 | 3.4:-83269666 | MS.gene013625:CDS |
| CTACACTGATCATCAAGGAA+GGG | 0.653825 | 3.4:-83270776 | MS.gene013625:CDS |
| GGTGGGATTCCAAATGTGGG+TGG | 0.655522 | 3.4:-83268563 | MS.gene013625:CDS |
| GGAAGGGTTAGAATTGAAGG+TGG | 0.663188 | 3.4:-83270760 | MS.gene013625:CDS |
| ACAAAGCCTATTGAATGCAG+CGG | 0.663816 | 3.4:+83269514 | None:intergenic |
| TGATGTGGTAAAGGATCACG+AGG | 0.665235 | 3.4:-83271163 | MS.gene013625:CDS |
| ATGGAAGGATGTCTGCTGGA+GGG | 0.689340 | 3.4:+83268522 | None:intergenic |
| AGCTATGGAGTTTAGCACAG+AGG | 0.706449 | 3.4:-83271247 | MS.gene013625:CDS |
| TACCAACATACCCAACACCA+TGG | 0.713448 | 3.4:+83268612 | None:intergenic |
| TTCCATCTTGCAAATCCATG+TGG | 0.717728 | 3.4:+83268635 | None:intergenic |
| GATGGAAGGATGTCTGCTGG+AGG | 0.722334 | 3.4:+83268521 | None:intergenic |
| GGATTTGCAAGATGGAACCA+TGG | 0.726905 | 3.4:-83268629 | MS.gene013625:CDS |
| GATGTGGTAAAGGATCACGA+GGG | 0.855257 | 3.4:-83271162 | MS.gene013625:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATAAGTTTTAAAAAAT+TGG | + | chr3.4:83271285-83271304 | None:intergenic | 10.0% |
| !! | AAATCTTGGATTTATAAAAA+AGG | - | chr3.4:83268921-83268940 | MS.gene013625:CDS | 15.0% |
| !! | TCAATATTAACTGTAATATT+TGG | + | chr3.4:83270961-83270980 | None:intergenic | 15.0% |
| !!! | TGTATGATTTTTTCATTTTA+GGG | + | chr3.4:83270403-83270422 | None:intergenic | 15.0% |
| !!! | TTGTATGATTTTTTCATTTT+AGG | + | chr3.4:83270404-83270423 | None:intergenic | 15.0% |
| !! | AAATGATGATATAAAAGCTA+TGG | - | chr3.4:83268468-83268487 | MS.gene013625:intron | 20.0% |
| !! | ATATAAATTGAAGCAAATGT+GGG | - | chr3.4:83269575-83269594 | MS.gene013625:CDS | 20.0% |
| !!! | AATGTCTATATTTGTTGTTT+TGG | + | chr3.4:83270914-83270933 | None:intergenic | 20.0% |
| !!! | GTATGATTTTTTCATTTTAG+GGG | + | chr3.4:83270402-83270421 | None:intergenic | 20.0% |
| !!! | TCGGTTAGAAAATATATTTT+GGG | - | chr3.4:83269080-83269099 | MS.gene013625:intron | 20.0% |
| !!! | TGGAAATAGTGTAATTTTTA+GGG | - | chr3.4:83269923-83269942 | MS.gene013625:CDS | 20.0% |
| !!! | TTGGAAATAGTGTAATTTTT+AGG | - | chr3.4:83269922-83269941 | MS.gene013625:CDS | 20.0% |
| ! | AAACAATAGAGACATATAAG+TGG | - | chr3.4:83269262-83269281 | MS.gene013625:intron | 25.0% |
| ! | AACAATAGAGACATATAAGT+GGG | - | chr3.4:83269263-83269282 | MS.gene013625:intron | 25.0% |
| ! | AATCCTGTAAAAATTACAAG+CGG | + | chr3.4:83269192-83269211 | None:intergenic | 25.0% |
| ! | AATCTTCTGAATGAAATCAT+AGG | + | chr3.4:83268716-83268735 | None:intergenic | 25.0% |
| ! | AATTAAAGCACATGCAAAAA+TGG | + | chr3.4:83269235-83269254 | None:intergenic | 25.0% |
| ! | AATTATGCAGAAAATCAACA+AGG | + | chr3.4:83269704-83269723 | None:intergenic | 25.0% |
| ! | AGAAGAATGAAGATAGTAAT+AGG | - | chr3.4:83268650-83268669 | MS.gene013625:intron | 25.0% |
| ! | ATGATTTCATTCAGAAGATT+TGG | - | chr3.4:83268716-83268735 | MS.gene013625:intron | 25.0% |
| ! | ATGGTCAAAAACAATAAAGA+AGG | - | chr3.4:83270118-83270137 | MS.gene013625:intron | 25.0% |
| ! | CATATAAATTGAAGCAAATG+TGG | - | chr3.4:83269574-83269593 | MS.gene013625:CDS | 25.0% |
| ! | CATATACTAGGTTTCTTAAT+GGG | - | chr3.4:83268880-83268899 | MS.gene013625:CDS | 25.0% |
| ! | TCACTCAATTTCCTATAATT+CGG | + | chr3.4:83268808-83268827 | None:intergenic | 25.0% |
| ! | TCATATACTAGGTTTCTTAA+TGG | - | chr3.4:83268879-83268898 | MS.gene013625:CDS | 25.0% |
| ! | TTATAGGAAATTGAGTGAAT+CGG | - | chr3.4:83268810-83268829 | MS.gene013625:CDS | 25.0% |
| ! | TTCATTTGATTCCGAATTAT+AGG | - | chr3.4:83268794-83268813 | MS.gene013625:CDS | 25.0% |
| !! | AAAGGTAAACTCTGAAAAAA+AGG | + | chr3.4:83269049-83269068 | None:intergenic | 25.0% |
| !! | AAAGTCTAATTTGCAAAAGA+TGG | - | chr3.4:83270099-83270118 | MS.gene013625:intron | 25.0% |
| !! | ATACCTGTTCTTTTTATAAG+TGG | + | chr3.4:83269163-83269182 | None:intergenic | 25.0% |
| !! | GTCGGTTAGAAAATATATTT+TGG | - | chr3.4:83269079-83269098 | MS.gene013625:intron | 25.0% |
| !! | TTTTGCAAATTAGACTTTCT+GGG | + | chr3.4:83270097-83270116 | None:intergenic | 25.0% |
| !!! | ACTTTATTTCTTTTATGTCC+AGG | - | chr3.4:83270744-83270763 | MS.gene013625:CDS | 25.0% |
| !!! | ATGTTTTGATTGTTGTAGAA+TGG | - | chr3.4:83271068-83271087 | MS.gene013625:CDS | 25.0% |
| !!! | CATGATGTTGATAATATCTT+TGG | - | chr3.4:83270826-83270845 | MS.gene013625:CDS | 25.0% |
| AAAGTTCCTAGAAGTCAAAA+AGG | - | chr3.4:83269854-83269873 | MS.gene013625:CDS | 30.0% | |
| AAATGTCAATGGCAACAATA+AGG | - | chr3.4:83270328-83270347 | MS.gene013625:intron | 30.0% | |
| AAGGTCAATAAATCTGTTGT+TGG | - | chr3.4:83270347-83270366 | MS.gene013625:intron | 30.0% | |
| AAGGTGTGAATTCATTTATC+AGG | - | chr3.4:83269655-83269674 | MS.gene013625:CDS | 30.0% | |
| ACTTCATGACAGAAATAATG+TGG | + | chr3.4:83270055-83270074 | None:intergenic | 30.0% | |
| AGAAAGACAGAAAATTGCAA+TGG | - | chr3.4:83268421-83268440 | MS.gene013625:intron | 30.0% | |
| AGGTCATAATGAGGAAAAAA+TGG | - | chr3.4:83270169-83270188 | MS.gene013625:intron | 30.0% | |
| ATCAAATGAACAAGATTTGG+AGG | + | chr3.4:83268784-83268803 | None:intergenic | 30.0% | |
| ATGGTGTATCAAAGAATAAG+TGG | - | chr3.4:83269541-83269560 | MS.gene013625:CDS | 30.0% | |
| CGATTACTTTGCAATAAAGA+GGG | - | chr3.4:83268607-83268626 | MS.gene013625:CDS | 30.0% | |
| CTACAGACATAATGAATTGT+TGG | - | chr3.4:83269743-83269762 | MS.gene013625:CDS | 30.0% | |
| CTTCATGACAGAAATAATGT+GGG | + | chr3.4:83270054-83270073 | None:intergenic | 30.0% | |
| GGAATCAAATGAACAAGATT+TGG | + | chr3.4:83268787-83268806 | None:intergenic | 30.0% | |
| GGAATGTTGTTATAATGTGA+TGG | + | chr3.4:83271230-83271249 | None:intergenic | 30.0% | |
| GTAGAATTCAGTAGTGATAA+TGG | - | chr3.4:83268379-83268398 | MS.gene013625:intron | 30.0% | |
| TAACATACACTATTTGTTCC+AGG | + | chr3.4:83271260-83271279 | None:intergenic | 30.0% | |
| TAAGAAACCTAGTATATGAC+AGG | + | chr3.4:83268878-83268897 | None:intergenic | 30.0% | |
| TATAACTACACTGATCATCA+AGG | - | chr3.4:83268949-83268968 | MS.gene013625:CDS | 30.0% | |
| TGGTGTATCAAAGAATAAGT+GGG | - | chr3.4:83269542-83269561 | MS.gene013625:CDS | 30.0% | |
| ! | AGGCTTGATTATGAATGTTT+TGG | - | chr3.4:83269117-83269136 | MS.gene013625:intron | 30.0% |
| ! | CTTTTGCAAATTAGACTTTC+TGG | + | chr3.4:83270098-83270117 | None:intergenic | 30.0% |
| ! | GGTGTTAAATGTGTTTTCAA+AGG | - | chr3.4:83269284-83269303 | MS.gene013625:intron | 30.0% |
| ! | TAACAATGCCATTGATTATG+AGG | - | chr3.4:83270250-83270269 | MS.gene013625:intron | 30.0% |
| ! | TGTTGTTATAATGTGATGGA+AGG | + | chr3.4:83271226-83271245 | None:intergenic | 30.0% |
| ! | TTGAACTCTTCTAAGAATCT+GGG | + | chr3.4:83269453-83269472 | None:intergenic | 30.0% |
| ! | TTTTGGATGTTTTTCGTACA+TGG | + | chr3.4:83269310-83269329 | None:intergenic | 30.0% |
| !! | ATTTGGTACTGACATAGAAT+GGG | + | chr3.4:83270800-83270819 | None:intergenic | 30.0% |
| !! | GCTACTTTGAGTTATTTTCA+GGG | - | chr3.4:83269003-83269022 | MS.gene013625:intron | 30.0% |
| !!! | GATAATGGTTTTGGTAATGA+TGG | - | chr3.4:83268394-83268413 | MS.gene013625:intron | 30.0% |
| !!! | TGCTACTTTGAGTTATTTTC+AGG | - | chr3.4:83269002-83269021 | MS.gene013625:intron | 30.0% |
| !!! | TTCAGTAGTGATAATGGTTT+TGG | - | chr3.4:83268385-83268404 | MS.gene013625:intron | 30.0% |
| !!! | TTTTTAGGGTTAACGTTTAC+CGG | - | chr3.4:83269937-83269956 | MS.gene013625:CDS | 30.0% |
| AAAGGAGGACATGAAAATCT+TGG | - | chr3.4:83268907-83268926 | MS.gene013625:CDS | 35.0% | |
| AACAACATTCCTTTGTATCC+TGG | - | chr3.4:83271239-83271258 | MS.gene013625:CDS | 35.0% | |
| AAGAGAGTTGTTGACAGTTA+TGG | - | chr3.4:83269522-83269541 | MS.gene013625:CDS | 35.0% | |
| AAGATAAATGTACGTCGTGA+GGG | - | chr3.4:83270305-83270324 | MS.gene013625:intron | 35.0% | |
| ACAGAAATAATGTGGGAACA+TGG | + | chr3.4:83270047-83270066 | None:intergenic | 35.0% | |
| ACAGCAAATTCATCACAAGA+TGG | + | chr3.4:83270714-83270733 | None:intergenic | 35.0% | |
| ACATCAATTCCAGCAAGTAT+TGG | + | chr3.4:83270497-83270516 | None:intergenic | 35.0% | |
| ACGCCACTTATAAAAAGAAC+AGG | - | chr3.4:83269157-83269176 | MS.gene013625:intron | 35.0% | |
| ACTTAGTTCATGGTTGTGAT+TGG | + | chr3.4:83268761-83268780 | None:intergenic | 35.0% | |
| AGAAGATGAGAATGAGAAAG+AGG | - | chr3.4:83270556-83270575 | MS.gene013625:intron | 35.0% | |
| AGAAGTCAAAAAGGCGATAA+AGG | - | chr3.4:83269863-83269882 | MS.gene013625:CDS | 35.0% | |
| CAAAGCTTCCTCATAATCAA+TGG | + | chr3.4:83270261-83270280 | None:intergenic | 35.0% | |
| CATTCTATGTCAGTACCAAA+TGG | - | chr3.4:83270799-83270818 | MS.gene013625:CDS | 35.0% | |
| CTATTTGTTCCAGGATACAA+AGG | + | chr3.4:83271251-83271270 | None:intergenic | 35.0% | |
| CTTAGTTCATGGTTGTGATT+GGG | + | chr3.4:83268760-83268779 | None:intergenic | 35.0% | |
| GAGATGTATTTCCGAATTCA+AGG | - | chr3.4:83269373-83269392 | MS.gene013625:intron | 35.0% | |
| GAGTTTACCTTTACAGATGA+TGG | - | chr3.4:83269057-83269076 | MS.gene013625:intron | 35.0% | |
| GCGATTACTTTGCAATAAAG+AGG | - | chr3.4:83268606-83268625 | MS.gene013625:CDS | 35.0% | |
| GGTATTAAACGTAAGAGAGA+TGG | - | chr3.4:83270847-83270866 | MS.gene013625:CDS | 35.0% | |
| GTAAGAACCTGTCATATACT+AGG | - | chr3.4:83268868-83268887 | MS.gene013625:CDS | 35.0% | |
| TCAACATCATGTCTACCATT+TGG | + | chr3.4:83270817-83270836 | None:intergenic | 35.0% | |
| TCGGATAAACAGATTGTTAG+TGG | - | chr3.4:83268829-83268848 | MS.gene013625:CDS | 35.0% | |
| TCTCGATAATGATACTGTAG+AGG | - | chr3.4:83268357-83268376 | MS.gene013625:CDS | 35.0% | |
| TGATGTCACATTTGTAGATG+AGG | - | chr3.4:83270511-83270530 | MS.gene013625:intron | 35.0% | |
| TGTCATGAAGTATGAGAACA+TGG | - | chr3.4:83270064-83270083 | MS.gene013625:intron | 35.0% | |
| TTCCTCATTATGACCTTCTT+TGG | + | chr3.4:83270165-83270184 | None:intergenic | 35.0% | |
| TTCTAACTCCACACACAAAA+TGG | + | chr3.4:83269620-83269639 | None:intergenic | 35.0% | |
| ! | AAGCCGCTTGTAATTTTTAC+AGG | - | chr3.4:83269186-83269205 | MS.gene013625:intron | 35.0% |
| ! | AGAGTCTTGTGTTGAAAAAC+CGG | + | chr3.4:83270881-83270900 | None:intergenic | 35.0% |
| ! | CATTGATTATGAGGAAGCTT+TGG | - | chr3.4:83270259-83270278 | MS.gene013625:intron | 35.0% |
| ! | GATTTTCATGTCCTCCTTTT+TGG | + | chr3.4:83268906-83268925 | None:intergenic | 35.0% |
| ! | GTTGAACTCTTCTAAGAATC+TGG | + | chr3.4:83269454-83269473 | None:intergenic | 35.0% |
| ! | TTACCTTTACAGATGATGGT+CGG | - | chr3.4:83269061-83269080 | MS.gene013625:intron | 35.0% |
| !! | ATTATGAGGAAGCTTTGGAA+GGG | - | chr3.4:83270264-83270283 | MS.gene013625:intron | 35.0% |
| !! | CATTTGGTACTGACATAGAA+TGG | + | chr3.4:83270801-83270820 | None:intergenic | 35.0% |
| !! | CCTCATTGATTTATCTCCAT+CGG | + | chr3.4:83269343-83269362 | None:intergenic | 35.0% |
| !! | TTTTTCAACACAAGACTCTG+CGG | - | chr3.4:83270882-83270901 | MS.gene013625:CDS | 35.0% |
| !!! | TTATCGCCTTTTTGACTTCT+AGG | + | chr3.4:83269863-83269882 | None:intergenic | 35.0% |
| !!! | TTATGAATGTTTTGGCGATG+TGG | - | chr3.4:83269125-83269144 | MS.gene013625:intron | 35.0% |
| !!! | TTTTTGGGTTCATCATGACA+AGG | - | chr3.4:83269971-83269990 | MS.gene013625:CDS | 35.0% |
| AAGGAAGGATGATGTGGTAA+AGG | - | chr3.4:83268558-83268577 | MS.gene013625:CDS | 40.0% | |
| ACAAAGCCTATTGAATGCAG+CGG | + | chr3.4:83270219-83270238 | None:intergenic | 40.0% | |
| ACTACACTGATCATCAAGGA+AGG | - | chr3.4:83268953-83268972 | MS.gene013625:CDS | 40.0% | |
| AGAACGACATCGATATGTGA+AGG | - | chr3.4:83269636-83269655 | MS.gene013625:CDS | 40.0% | |
| ATGCTGAGTTGCTTCACTAT+AGG | + | chr3.4:83268338-83268357 | None:intergenic | 40.0% | |
| CAAAAATGGTCGTTTCACCA+TGG | + | chr3.4:83269221-83269240 | None:intergenic | 40.0% | |
| CAAAGGTGATGCCTTGAATT+CGG | + | chr3.4:83269387-83269406 | None:intergenic | 40.0% | |
| CAAGATAAATGTACGTCGTG+AGG | - | chr3.4:83270304-83270323 | MS.gene013625:intron | 40.0% | |
| CAAGGAAGGGTTAGAATTGA+AGG | - | chr3.4:83268967-83268986 | MS.gene013625:CDS | 40.0% | |
| CACTCAGACTCAAATTGTTC+AGG | + | chr3.4:83269501-83269520 | None:intergenic | 40.0% | |
| CCAGATAATGCTAAACCCAA+AGG | - | chr3.4:83270374-83270393 | MS.gene013625:intron | 40.0% | |
| CCGATGGAGATAAATCAATG+AGG | - | chr3.4:83269340-83269359 | MS.gene013625:intron | 40.0% | |
| CTACACTGATCATCAAGGAA+GGG | - | chr3.4:83268954-83268973 | MS.gene013625:CDS | 40.0% | |
| CTCATTATGACCTTCTTTGG+AGG | + | chr3.4:83270162-83270181 | None:intergenic | 40.0% | |
| CTCCAAAGAAGGTCATAATG+AGG | - | chr3.4:83270160-83270179 | MS.gene013625:intron | 40.0% | |
| CTGAACAATTTGAGTCTGAG+TGG | - | chr3.4:83269499-83269518 | MS.gene013625:CDS | 40.0% | |
| GAAGTTAATCCACCCACATT+TGG | + | chr3.4:83271179-83271198 | None:intergenic | 40.0% | |
| GAATGAGAAAGAGGATGAGA+AGG | - | chr3.4:83270565-83270584 | MS.gene013625:intron | 40.0% | |
| GACGTTGTTCTCGTTGTAAA+AGG | - | chr3.4:83270447-83270466 | MS.gene013625:intron | 40.0% | |
| GATGTAGATGCCATGAACAA+AGG | + | chr3.4:83269404-83269423 | None:intergenic | 40.0% | |
| GATTTGGAGGACTTAGTTCA+TGG | + | chr3.4:83268771-83268790 | None:intergenic | 40.0% | |
| GGGTTTCATCATTCATGTCA+TGG | + | chr3.4:83270780-83270799 | None:intergenic | 40.0% | |
| TAACCGACCATCATCTGTAA+AGG | + | chr3.4:83269067-83269086 | None:intergenic | 40.0% | |
| TCATCATTTGCCTCCAAAGA+AGG | - | chr3.4:83270149-83270168 | MS.gene013625:intron | 40.0% | |
| TGTCACATTTGTAGATGAGG+AGG | - | chr3.4:83270514-83270533 | MS.gene013625:intron | 40.0% | |
| TGTTCTCGTTGTAAAAGGCA+TGG | - | chr3.4:83270452-83270471 | MS.gene013625:intron | 40.0% | |
| TTCCATCTTGCAAATCCATG+TGG | + | chr3.4:83271098-83271117 | None:intergenic | 40.0% | |
| TTGTAGAATGGTATGCCACA+TGG | - | chr3.4:83271080-83271099 | MS.gene013625:CDS | 40.0% | |
| TTTACAGGATTCAACCACCA+TGG | - | chr3.4:83269201-83269220 | MS.gene013625:intron | 40.0% | |
| ! | ATTTGGAGTCACAGAAGCAT+CGG | + | chr3.4:83270944-83270963 | None:intergenic | 40.0% |
| ! | CCTTTGGGTTTAGCATTATC+TGG | + | chr3.4:83270377-83270396 | None:intergenic | 40.0% |
| ! | GGTTTCTTAATGGGCCAAAA+AGG | - | chr3.4:83268889-83268908 | MS.gene013625:CDS | 40.0% |
| ! | GTTAGTGGTTTGCATTCTCA+AGG | - | chr3.4:83268844-83268863 | MS.gene013625:CDS | 40.0% |
| ! | TGCATTCAATAGGCTTTGTG+AGG | - | chr3.4:83270220-83270239 | MS.gene013625:intron | 40.0% |
| ! | TTCTTAATGGGCCAAAAAGG+AGG | - | chr3.4:83268892-83268911 | MS.gene013625:CDS | 40.0% |
| !! | AGAAAGTGTCCAATACTTGC+TGG | - | chr3.4:83270485-83270504 | MS.gene013625:intron | 40.0% |
| !! | GATTATGAGGAAGCTTTGGA+AGG | - | chr3.4:83270263-83270282 | MS.gene013625:intron | 40.0% |
| !! | TTCATTTTAGGGGCTCCTTT+GGG | + | chr3.4:83270392-83270411 | None:intergenic | 40.0% |
| !! | TTTCATTTTAGGGGCTCCTT+TGG | + | chr3.4:83270393-83270412 | None:intergenic | 40.0% |
| AAAGCGTATGCTCGTTTCCA+TGG | - | chr3.4:83268526-83268545 | MS.gene013625:CDS | 45.0% | |
| AAATGGTCGTTTCACCATGG+TGG | + | chr3.4:83269218-83269237 | None:intergenic | 45.0% | |
| AAGCGTATGCTCGTTTCCAT+GGG | - | chr3.4:83268527-83268546 | MS.gene013625:CDS | 45.0% | |
| AATAGGCAAACCATGCGAAC+TGG | - | chr3.4:83268667-83268686 | MS.gene013625:intron | 45.0% | |
| ACAGTTTACGAGCGTGTTGA+AGG | - | chr3.4:83271358-83271377 | MS.gene013625:CDS | 45.0% | |
| ACGAGGGAAAAATTGTTGCG+CGG | - | chr3.4:83268584-83268603 | MS.gene013625:CDS | 45.0% | |
| AGAGGATGAGAAGGAATACG+AGG | - | chr3.4:83270574-83270593 | MS.gene013625:intron | 45.0% | |
| AGCTATGGAGTTTAGCACAG+AGG | - | chr3.4:83268483-83268502 | MS.gene013625:CDS | 45.0% | |
| ATTTGTAGATGAGGAGGAGG+AGG | - | chr3.4:83270520-83270539 | MS.gene013625:intron | 45.0% | |
| CAAGATGGAACCATGGTGTT+GGG | - | chr3.4:83271108-83271127 | MS.gene013625:CDS | 45.0% | |
| CACATTTGTAGATGAGGAGG+AGG | - | chr3.4:83270517-83270536 | MS.gene013625:intron | 45.0% | |
| CACTATTTCCAACCTCAGCA+TGG | + | chr3.4:83269914-83269933 | None:intergenic | 45.0% | |
| CACTTACCGCTGCATTCAAT+AGG | - | chr3.4:83270210-83270229 | MS.gene013625:intron | 45.0% | |
| CCAAAAGCGATTGTTACCGA+TGG | - | chr3.4:83269324-83269343 | MS.gene013625:intron | 45.0% | |
| CCCAAAAAGCTGCATCTTTC+CGG | + | chr3.4:83269959-83269978 | None:intergenic | 45.0% | |
| GATGTGGTAAAGGATCACGA+GGG | - | chr3.4:83268568-83268587 | MS.gene013625:CDS | 45.0% | |
| GGAAGGGTTAGAATTGAAGG+TGG | - | chr3.4:83268970-83268989 | MS.gene013625:intron | 45.0% | |
| GGATTTGCAAGATGGAACCA+TGG | - | chr3.4:83271101-83271120 | MS.gene013625:CDS | 45.0% | |
| GTTTCCATGGGTTTGTCGTA+AGG | - | chr3.4:83268539-83268558 | MS.gene013625:CDS | 45.0% | |
| TACCAACATACCCAACACCA+TGG | + | chr3.4:83271121-83271140 | None:intergenic | 45.0% | |
| TACGGTGGGATTCCAAATGT+GGG | - | chr3.4:83271164-83271183 | MS.gene013625:CDS | 45.0% | |
| TGATGTGGTAAAGGATCACG+AGG | - | chr3.4:83268567-83268586 | MS.gene013625:CDS | 45.0% | |
| TGCCACATGGATTTGCAAGA+TGG | - | chr3.4:83271093-83271112 | MS.gene013625:CDS | 45.0% | |
| TGTCATGGCTTATAGACACC+TGG | + | chr3.4:83270765-83270784 | None:intergenic | 45.0% | |
| TGTCGTAAGGAAGGATGATG+TGG | - | chr3.4:83268552-83268571 | MS.gene013625:CDS | 45.0% | |
| ! | AACCATGGTGTTGGGTATGT+TGG | - | chr3.4:83271116-83271135 | MS.gene013625:CDS | 45.0% |
| ! | ACCGGAAAGATGCAGCTTTT+TGG | - | chr3.4:83269955-83269974 | MS.gene013625:CDS | 45.0% |
| ! | ATGCGAGACCATTTTGTGTG+TGG | - | chr3.4:83269609-83269628 | MS.gene013625:CDS | 45.0% |
| ! | CAAGGCATCACCTTTGTTCA+TGG | - | chr3.4:83269391-83269410 | MS.gene013625:intron | 45.0% |
| ! | CCATCGGTAACAATCGCTTT+TGG | + | chr3.4:83269327-83269346 | None:intergenic | 45.0% |
| ! | CCGGAAAGATGCAGCTTTTT+GGG | - | chr3.4:83269956-83269975 | MS.gene013625:CDS | 45.0% |
| !! | TTTCCCGCTTTTCCTGTGTA+CGG | - | chr3.4:83271146-83271165 | MS.gene013625:CDS | 45.0% |
| AAATGGTCATGTTCCGCCGA+TGG | - | chr3.4:83270186-83270205 | MS.gene013625:intron | 50.0% | |
| AAGAGAGATGGCGACAAAGC+CGG | - | chr3.4:83270859-83270878 | MS.gene013625:CDS | 50.0% | |
| AATGGTCATGTTCCGCCGAT+GGG | - | chr3.4:83270187-83270206 | MS.gene013625:intron | 50.0% | |
| AGATGAGGAGGAGGAGGAAA+AGG | - | chr3.4:83270526-83270545 | MS.gene013625:intron | 50.0% | |
| AGCAAGACATCCAGTTCGCA+TGG | + | chr3.4:83268680-83268699 | None:intergenic | 50.0% | |
| ATCTGTCACTCACCATGCTG+AGG | - | chr3.4:83269899-83269918 | MS.gene013625:CDS | 50.0% | |
| ATGGAAGGATGTCTGCTGGA+GGG | + | chr3.4:83271211-83271230 | None:intergenic | 50.0% | |
| CCATGGGTTTGTCGTAAGGA+AGG | - | chr3.4:83268543-83268562 | MS.gene013625:CDS | 50.0% | |
| CCTTCCTTACGACAAACCCA+TGG | + | chr3.4:83268546-83268565 | None:intergenic | 50.0% | |
| CGTCGTGAGGGAAATGTCAA+TGG | - | chr3.4:83270317-83270336 | MS.gene013625:intron | 50.0% | |
| GAAGCTTCACGCTCAAATCC+AGG | + | chr3.4:83269816-83269835 | None:intergenic | 50.0% | |
| GCAAGATGGAACCATGGTGT+TGG | - | chr3.4:83271107-83271126 | MS.gene013625:CDS | 50.0% | |
| GGATGAGAAGGAATACGAGG+AGG | - | chr3.4:83270577-83270596 | MS.gene013625:intron | 50.0% | |
| GGCAAGGAAGTTGTCAACAC+AGG | + | chr3.4:83269795-83269814 | None:intergenic | 50.0% | |
| GTACGGTGGGATTCCAAATG+TGG | - | chr3.4:83271163-83271182 | MS.gene013625:CDS | 50.0% | |
| TACGAGCGTGTTGAAGGACA+TGG | - | chr3.4:83271364-83271383 | MS.gene013625:CDS | 50.0% | |
| TTCACGCTCAAATCCAGGCA+AGG | + | chr3.4:83269811-83269830 | None:intergenic | 50.0% | |
| TTTGGGCAGATTCTGCAAGC+AGG | - | chr3.4:83269097-83269116 | MS.gene013625:intron | 50.0% | |
| ! | GTGTTGACAACTTCCTTGCC+TGG | - | chr3.4:83269795-83269814 | MS.gene013625:CDS | 50.0% |
| ! | TGTGATGGAAGGATGTCTGC+TGG | + | chr3.4:83271215-83271234 | None:intergenic | 50.0% |
| ! | TTTGGAATCCCACCGTACAC+AGG | + | chr3.4:83271161-83271180 | None:intergenic | 50.0% |
| ATGCAGCGGTAAGTGCCCAT+CGG | + | chr3.4:83270205-83270224 | None:intergenic | 55.0% | |
| CAAAGATGCAGAGGAGGAGG+TGG | - | chr3.4:83270601-83270620 | MS.gene013625:intron | 55.0% | |
| CCACCGTACACAGGAAAAGC+GGG | + | chr3.4:83271152-83271171 | None:intergenic | 55.0% | |
| CCCACCGTACACAGGAAAAG+CGG | + | chr3.4:83271153-83271172 | None:intergenic | 55.0% | |
| CGAGGAGGACAAAGATGCAG+AGG | - | chr3.4:83270592-83270611 | MS.gene013625:intron | 55.0% | |
| GATGGAAGGATGTCTGCTGG+AGG | + | chr3.4:83271212-83271231 | None:intergenic | 55.0% | |
| GGACAAAGATGCAGAGGAGG+AGG | - | chr3.4:83270598-83270617 | MS.gene013625:intron | 55.0% | |
| GGAGGACAAAGATGCAGAGG+AGG | - | chr3.4:83270595-83270614 | MS.gene013625:intron | 55.0% | |
| GGTGGGATTCCAAATGTGGG+TGG | - | chr3.4:83271167-83271186 | MS.gene013625:CDS | 55.0% | |
| GTCACTCACCATGCTGAGGT+TGG | - | chr3.4:83269903-83269922 | MS.gene013625:CDS | 55.0% | |
| !! | CCGCTTTTCCTGTGTACGGT+GGG | - | chr3.4:83271150-83271169 | MS.gene013625:CDS | 55.0% |
| AGATGCAGAGGAGGAGGTGG+AGG | - | chr3.4:83270604-83270623 | MS.gene013625:intron | 60.0% | |
| !! | CCCGCTTTTCCTGTGTACGG+TGG | - | chr3.4:83271149-83271168 | MS.gene013625:CDS | 60.0% |
| AGAGGAGGAGGTGGAGGAGG+AGG | - | chr3.4:83270610-83270629 | MS.gene013625:intron | 65.0% | |
| CAGCGGTAAGTGCCCATCGG+CGG | + | chr3.4:83270202-83270221 | None:intergenic | 65.0% | |
| TGCAGAGGAGGAGGTGGAGG+AGG | - | chr3.4:83270607-83270626 | MS.gene013625:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 83268328 | 83271424 | 83268328 | ID=MS.gene013625 |
| chr3.4 | mRNA | 83268328 | 83271424 | 83268328 | ID=MS.gene013625.t1;Parent=MS.gene013625 |
| chr3.4 | exon | 83270670 | 83271424 | 83270670 | ID=MS.gene013625.t1.exon1;Parent=MS.gene013625.t1 |
| chr3.4 | CDS | 83270670 | 83271424 | 83270670 | ID=cds.MS.gene013625.t1;Parent=MS.gene013625.t1 |
| chr3.4 | exon | 83269403 | 83270021 | 83269403 | ID=MS.gene013625.t1.exon2;Parent=MS.gene013625.t1 |
| chr3.4 | CDS | 83269403 | 83270021 | 83269403 | ID=cds.MS.gene013625.t1;Parent=MS.gene013625.t1 |
| chr3.4 | exon | 83268768 | 83268986 | 83268768 | ID=MS.gene013625.t1.exon3;Parent=MS.gene013625.t1 |
| chr3.4 | CDS | 83268768 | 83268986 | 83268768 | ID=cds.MS.gene013625.t1;Parent=MS.gene013625.t1 |
| chr3.4 | exon | 83268481 | 83268666 | 83268481 | ID=MS.gene013625.t1.exon4;Parent=MS.gene013625.t1 |
| chr3.4 | CDS | 83268481 | 83268666 | 83268481 | ID=cds.MS.gene013625.t1;Parent=MS.gene013625.t1 |
| chr3.4 | exon | 83268328 | 83268390 | 83268328 | ID=MS.gene013625.t1.exon5;Parent=MS.gene013625.t1 |
| chr3.4 | CDS | 83268328 | 83268390 | 83268328 | ID=cds.MS.gene013625.t1;Parent=MS.gene013625.t1 |
| Gene Sequence |
| Protein sequence |
