Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013707.t1 | XP_024626731.1 | 73.2 | 654 | 24 | 2 | 148 | 650 | 1 | 654 | 9.90E-263 | 916 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013707.t1 | Q9SZL8 | 33.2 | 566 | 359 | 8 | 2 | 561 | 62 | 614 | 1.5e-89 | 332.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013707.t1 | A0A396GJD5 | 71.9 | 562 | 154 | 1 | 1 | 562 | 1 | 558 | 2.2e-240 | 841.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene013707.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013707.t1 | MTR_6g051425 | 85.757 | 337 | 36 | 2 | 1 | 331 | 1 | 331 | 0.0 | 592 |
| MS.gene013707.t1 | MTR_3g465760 | 97.143 | 70 | 2 | 0 | 40 | 109 | 1 | 70 | 8.49e-42 | 145 |
| MS.gene013707.t1 | MTR_4g035820 | 29.819 | 332 | 197 | 11 | 18 | 333 | 76 | 387 | 5.38e-32 | 132 |
| MS.gene013707.t1 | MTR_0558s0020 | 31.076 | 251 | 154 | 6 | 22 | 255 | 41 | 289 | 1.67e-29 | 119 |
| MS.gene013707.t1 | MTR_1g070355 | 32.051 | 234 | 149 | 5 | 25 | 255 | 82 | 308 | 5.36e-29 | 122 |
| MS.gene013707.t1 | MTR_2g039370 | 69.231 | 78 | 20 | 1 | 49 | 126 | 98 | 171 | 2.02e-28 | 115 |
| MS.gene013707.t1 | MTR_6g090505 | 31.579 | 209 | 121 | 4 | 64 | 255 | 21 | 224 | 8.50e-25 | 107 |
| MS.gene013707.t1 | MTR_8g446020 | 31.034 | 203 | 132 | 4 | 61 | 255 | 47 | 249 | 3.78e-24 | 102 |
| MS.gene013707.t1 | MTR_7g446480 | 32.941 | 170 | 114 | 0 | 105 | 274 | 149 | 318 | 4.45e-24 | 103 |
| MS.gene013707.t1 | MTR_7g446520 | 28.185 | 259 | 160 | 4 | 25 | 280 | 96 | 331 | 1.01e-23 | 103 |
| MS.gene013707.t1 | MTR_7g446510 | 32.544 | 169 | 114 | 0 | 105 | 273 | 164 | 332 | 1.49e-22 | 99.8 |
| MS.gene013707.t1 | MTR_1g083640 | 27.948 | 229 | 146 | 5 | 22 | 233 | 56 | 282 | 2.82e-20 | 92.0 |
| MS.gene013707.t1 | MTR_1g013060 | 26.636 | 214 | 146 | 5 | 13 | 222 | 23 | 229 | 7.23e-19 | 86.7 |
| MS.gene013707.t1 | MTR_5g076070 | 25.551 | 227 | 163 | 4 | 25 | 250 | 61 | 282 | 3.65e-18 | 85.9 |
| MS.gene013707.t1 | MTR_0402s0040 | 28.736 | 174 | 106 | 6 | 29 | 195 | 38 | 200 | 1.69e-14 | 77.0 |
| MS.gene013707.t1 | MTR_3g450850 | 24.609 | 256 | 171 | 6 | 17 | 263 | 47 | 289 | 2.32e-14 | 75.5 |
| MS.gene013707.t1 | MTR_6g022070 | 32.168 | 143 | 93 | 2 | 316 | 458 | 1 | 139 | 8.32e-14 | 73.6 |
| MS.gene013707.t1 | MTR_2g014100 | 30.049 | 203 | 123 | 7 | 22 | 205 | 49 | 251 | 2.67e-13 | 70.9 |
| MS.gene013707.t1 | MTR_1g008290 | 26.316 | 114 | 83 | 1 | 105 | 218 | 32 | 144 | 5.86e-13 | 67.0 |
| MS.gene013707.t1 | MTR_0337s0040 | 26.374 | 182 | 116 | 4 | 61 | 229 | 48 | 224 | 1.16e-11 | 65.5 |
| MS.gene013707.t1 | MTR_2g098920 | 31.579 | 114 | 70 | 3 | 11 | 124 | 77 | 182 | 5.51e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013707.t1 | AT4G38180 | 33.925 | 563 | 359 | 8 | 2 | 561 | 62 | 614 | 4.91e-105 | 337 |
| MS.gene013707.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 4.10e-82 | 276 |
| MS.gene013707.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 4.10e-82 | 276 |
| MS.gene013707.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 4.10e-82 | 276 |
| MS.gene013707.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 4.10e-82 | 276 |
| MS.gene013707.t1 | AT4G15090 | 30.699 | 544 | 357 | 9 | 25 | 561 | 59 | 589 | 4.10e-82 | 276 |
| MS.gene013707.t1 | AT2G27110 | 29.596 | 544 | 347 | 8 | 19 | 561 | 51 | 559 | 1.17e-80 | 273 |
| MS.gene013707.t1 | AT2G27110 | 29.596 | 544 | 347 | 8 | 19 | 561 | 51 | 559 | 1.17e-80 | 273 |
| MS.gene013707.t1 | AT3G06250 | 29.004 | 562 | 343 | 11 | 2 | 561 | 177 | 684 | 7.99e-74 | 253 |
| MS.gene013707.t1 | AT3G06250 | 29.004 | 562 | 343 | 11 | 2 | 561 | 177 | 684 | 7.99e-74 | 253 |
| MS.gene013707.t1 | AT3G06250 | 29.004 | 562 | 343 | 11 | 2 | 561 | 177 | 684 | 7.99e-74 | 253 |
| MS.gene013707.t1 | AT2G27110 | 34.400 | 375 | 241 | 4 | 188 | 561 | 44 | 414 | 2.78e-72 | 247 |
| MS.gene013707.t1 | AT1G76320 | 28.942 | 539 | 362 | 10 | 25 | 561 | 5 | 524 | 7.46e-71 | 243 |
| MS.gene013707.t1 | AT3G22170 | 28.957 | 556 | 345 | 11 | 20 | 558 | 73 | 595 | 9.78e-71 | 246 |
| MS.gene013707.t1 | AT3G22170 | 28.957 | 556 | 345 | 11 | 20 | 558 | 73 | 595 | 9.78e-71 | 246 |
| MS.gene013707.t1 | AT1G76320 | 28.942 | 539 | 362 | 10 | 25 | 561 | 5 | 524 | 1.87e-70 | 243 |
| MS.gene013707.t1 | AT1G76320 | 28.942 | 539 | 362 | 10 | 25 | 561 | 5 | 524 | 2.49e-70 | 243 |
| MS.gene013707.t1 | AT1G76320 | 28.942 | 539 | 362 | 10 | 25 | 561 | 5 | 524 | 2.49e-70 | 243 |
| MS.gene013707.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 5.45e-67 | 234 |
| MS.gene013707.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 6.78e-67 | 233 |
| MS.gene013707.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 6.78e-67 | 233 |
| MS.gene013707.t1 | AT5G18960 | 28.214 | 560 | 346 | 12 | 5 | 561 | 202 | 708 | 9.27e-67 | 234 |
| MS.gene013707.t1 | AT5G18960 | 28.214 | 560 | 346 | 12 | 5 | 561 | 202 | 708 | 9.27e-67 | 234 |
| MS.gene013707.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 1.02e-66 | 233 |
| MS.gene013707.t1 | AT4G19990 | 28.007 | 582 | 355 | 11 | 1 | 561 | 1 | 539 | 1.02e-66 | 233 |
| MS.gene013707.t1 | AT4G19990 | 28.028 | 578 | 352 | 11 | 5 | 561 | 19 | 553 | 2.64e-66 | 232 |
| MS.gene013707.t1 | AT4G19990 | 28.803 | 493 | 304 | 8 | 74 | 561 | 32 | 482 | 1.45e-62 | 220 |
| MS.gene013707.t1 | AT1G52520 | 27.240 | 558 | 380 | 7 | 10 | 561 | 81 | 618 | 1.07e-61 | 218 |
| MS.gene013707.t1 | AT1G10240 | 29.107 | 560 | 354 | 15 | 18 | 558 | 49 | 584 | 2.42e-59 | 211 |
| MS.gene013707.t1 | AT1G10240 | 29.107 | 560 | 354 | 15 | 18 | 558 | 49 | 584 | 2.42e-59 | 211 |
| MS.gene013707.t1 | AT1G80010 | 26.944 | 553 | 378 | 10 | 20 | 558 | 98 | 638 | 5.49e-58 | 208 |
| MS.gene013707.t1 | AT5G28530 | 26.678 | 566 | 371 | 11 | 18 | 562 | 56 | 598 | 6.15e-58 | 207 |
| MS.gene013707.t1 | AT5G28530 | 26.678 | 566 | 371 | 11 | 18 | 562 | 56 | 598 | 6.15e-58 | 207 |
| MS.gene013707.t1 | AT5G28530 | 27.018 | 570 | 368 | 12 | 18 | 562 | 56 | 602 | 2.22e-57 | 206 |
| MS.gene013707.t1 | AT4G38170 | 29.508 | 366 | 250 | 5 | 199 | 562 | 21 | 380 | 2.80e-57 | 203 |
| MS.gene013707.t1 | AT2G32250 | 25.741 | 540 | 350 | 8 | 20 | 558 | 41 | 530 | 1.49e-54 | 199 |
| MS.gene013707.t1 | AT2G32250 | 25.607 | 535 | 347 | 8 | 25 | 558 | 5 | 489 | 2.43e-54 | 199 |
| MS.gene013707.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 2.76e-54 | 199 |
| MS.gene013707.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 2.76e-54 | 199 |
| MS.gene013707.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 2.81e-54 | 199 |
| MS.gene013707.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 2.81e-54 | 199 |
| MS.gene013707.t1 | AT2G32250 | 25.556 | 540 | 351 | 8 | 20 | 558 | 41 | 530 | 2.81e-54 | 199 |
| MS.gene013707.t1 | AT2G32250 | 25.794 | 535 | 346 | 8 | 25 | 558 | 5 | 489 | 2.88e-54 | 198 |
| MS.gene013707.t1 | AT5G28530 | 23.339 | 557 | 338 | 13 | 18 | 562 | 56 | 535 | 8.86e-32 | 131 |
| MS.gene013707.t1 | AT5G28530 | 23.708 | 561 | 335 | 14 | 18 | 562 | 56 | 539 | 2.57e-31 | 130 |
Find 107 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAATGCACCTTCTCATTT+TGG | 0.108203 | 3.4:+82134096 | MS.gene013707:CDS |
| ACTAATGTTTGGAGTTATTT+AGG | 0.178667 | 3.4:+82133550 | MS.gene013707:CDS |
| AGGGTTATCATTCCTCAAAT+TGG | 0.230210 | 3.4:+82135520 | MS.gene013707:intron |
| TGTATAAAATTCGTCATAAA+TGG | 0.230515 | 3.4:+82134259 | MS.gene013707:CDS |
| CATAAACGGTGACATGTATT+TGG | 0.254781 | 3.4:-82134057 | None:intergenic |
| AAAAGTTTCATGGTTTGTTT+TGG | 0.257014 | 3.4:+82134136 | MS.gene013707:CDS |
| AACTCTGATCAAAAGTTTCA+TGG | 0.276945 | 3.4:+82134126 | MS.gene013707:CDS |
| CCATCTTGAAGCCATGTTCT+TGG | 0.280191 | 3.4:-82133183 | None:intergenic |
| CACATGTAACTCATTGATTC+AGG | 0.282301 | 3.4:+82135593 | MS.gene013707:CDS |
| AATGTTCCTTCTACTTCTTT+TGG | 0.283406 | 3.4:+82135398 | MS.gene013707:CDS |
| ACTACCACATGTTTCTTATT+AGG | 0.296197 | 3.4:-82134651 | None:intergenic |
| CACGTTTAACCAATGTGTTT+TGG | 0.307246 | 3.4:+82133752 | MS.gene013707:CDS |
| GGGTTATCATTCCTCAAATT+GGG | 0.312307 | 3.4:+82135521 | MS.gene013707:intron |
| GCGAATTACTAAGTTGATAA+TGG | 0.317295 | 3.4:+82133411 | MS.gene013707:CDS |
| GAAAAGAGTAAATTAATTAA+AGG | 0.318587 | 3.4:+82133640 | MS.gene013707:CDS |
| AAAGTTGATTATGATTGTTT+TGG | 0.323388 | 3.4:+82133790 | MS.gene013707:CDS |
| CATTGGTTAAACGTGATTCT+TGG | 0.328206 | 3.4:-82133744 | None:intergenic |
| AAACTTCTGTTTCTTTCAAT+TGG | 0.330619 | 3.4:+82133935 | MS.gene013707:CDS |
| ATTGTTCTTAAACCCTTGTT+TGG | 0.337062 | 3.4:-82133284 | None:intergenic |
| CATGTCACCGTTTATGCTTA+TGG | 0.342415 | 3.4:+82134064 | MS.gene013707:CDS |
| ACTAAGATGTTACAAGGAAT+TGG | 0.345022 | 3.4:+82135570 | MS.gene013707:CDS |
| CTTATTAGCATTTGAAAAGA+TGG | 0.359804 | 3.4:+82134398 | MS.gene013707:CDS |
| TCACCTACGATTTCTCCTTC+TGG | 0.371892 | 3.4:-82133310 | None:intergenic |
| GCAAGTGATTGATTAAAGAT+TGG | 0.373633 | 3.4:-82133672 | None:intergenic |
| TTGTCGAAAGTTTGATTCAA+TGG | 0.378573 | 3.4:+82134707 | MS.gene013707:CDS |
| CCCATCCATGGAAGAACTAA+TGG | 0.382474 | 3.4:-82135339 | None:intergenic |
| CAAGTGATTGATTAAAGATT+GGG | 0.384672 | 3.4:-82133671 | None:intergenic |
| GTATGAAAGTTACTAATGTT+TGG | 0.386893 | 3.4:+82133539 | MS.gene013707:CDS |
| AGACTTTATGAGACCTCCTT+TGG | 0.388927 | 3.4:-82133503 | None:intergenic |
| CAAGTAGTGCTTTCCAAGAT+AGG | 0.389222 | 3.4:+82135711 | MS.gene013707:CDS |
| TCCATTAGTTCTTCCATGGA+TGG | 0.401531 | 3.4:+82135338 | MS.gene013707:CDS |
| AGGAGGTCTCATAAAGTCTA+TGG | 0.403748 | 3.4:+82133507 | MS.gene013707:CDS |
| GAAGTACTTCTAAAGACATT+GGG | 0.403994 | 3.4:+82134583 | MS.gene013707:CDS |
| TAACATCTTAGTAAATGAAA+TGG | 0.407933 | 3.4:-82135559 | None:intergenic |
| AAAACAATCATAATCAACTT+TGG | 0.409741 | 3.4:-82133788 | None:intergenic |
| ACTTAGACTGGTTGCTGCTC+CGG | 0.416105 | 3.4:-82134370 | None:intergenic |
| CATTTGCAAAATGTCATGTT+TGG | 0.424549 | 3.4:+82133892 | MS.gene013707:CDS |
| CATAACGTCTCCGATTGCTT+TGG | 0.425284 | 3.4:-82134034 | None:intergenic |
| AATGAGTATCTTGCTGGAAC+TGG | 0.425528 | 3.4:+82134558 | MS.gene013707:CDS |
| CTATCTTGGAAAGCACTACT+TGG | 0.431144 | 3.4:-82135710 | None:intergenic |
| CCATTAGTTCTTCCATGGAT+GGG | 0.443746 | 3.4:+82135339 | MS.gene013707:CDS |
| CTTATCAAAGGGCTGATTCA+AGG | 0.444079 | 3.4:+82133338 | MS.gene013707:CDS |
| TGTCGAAAGTTTGATTCAAT+GGG | 0.444829 | 3.4:+82134708 | MS.gene013707:CDS |
| TTGTTCCATTAGTTCTTCCA+TGG | 0.449933 | 3.4:+82135334 | MS.gene013707:CDS |
| CGATTTAATGTTAGCAAGGA+TGG | 0.456458 | 3.4:+82133382 | MS.gene013707:CDS |
| CTCACTGATATTTATGATGC+GGG | 0.456755 | 3.4:-82134481 | None:intergenic |
| GATTCAAAAGAAGAGTTTGA+AGG | 0.459181 | 3.4:+82134177 | MS.gene013707:CDS |
| ATGTTATTGAGAACATTAGA+AGG | 0.459905 | 3.4:-82135362 | None:intergenic |
| TATTTAGGAGAAGAGGTTGG+TGG | 0.461595 | 3.4:+82133565 | MS.gene013707:CDS |
| GGTGCACCAAAAGAAGTAGA+AGG | 0.473964 | 3.4:-82135404 | None:intergenic |
| ATATATGCCATAAGCATAAA+CGG | 0.475933 | 3.4:-82134071 | None:intergenic |
| AGTGTGTTAAGTGCGATTGC+CGG | 0.478839 | 3.4:+82134351 | MS.gene013707:CDS |
| AGTATTTAAACCCCAATTTG+AGG | 0.480130 | 3.4:-82135532 | None:intergenic |
| TGATGCGGGGAGGCATACTT+TGG | 0.480707 | 3.4:-82134467 | None:intergenic |
| GATAAATTATAAACCTCTAA+AGG | 0.488005 | 3.4:-82135425 | None:intergenic |
| GTTGGTGGATTTGATAAGCT+TGG | 0.492644 | 3.4:+82133580 | MS.gene013707:CDS |
| TGATGATTTACCCCAACAAA+AGG | 0.496863 | 3.4:-82133871 | None:intergenic |
| AAGAAGAGTTTGAAGGCACT+TGG | 0.500098 | 3.4:+82134184 | MS.gene013707:CDS |
| CAAGAACATGGCTTCAAGAT+GGG | 0.500638 | 3.4:+82133184 | MS.gene013707:CDS |
| ACAAGCTTCAAAATCACAAA+TGG | 0.503549 | 3.4:+82134226 | MS.gene013707:CDS |
| CCAAGAACATGGCTTCAAGA+TGG | 0.507821 | 3.4:+82133183 | MS.gene013707:CDS |
| AGTTATTTAGGAGAAGAGGT+TGG | 0.508257 | 3.4:+82133562 | MS.gene013707:CDS |
| GGAGCCATGGCCAAAGCAAT+CGG | 0.517653 | 3.4:+82134024 | MS.gene013707:CDS |
| GTCTCCGATTGCTTTGGCCA+TGG | 0.517925 | 3.4:-82134028 | None:intergenic |
| TTGCGAATTTACAACATCAA+AGG | 0.519182 | 3.4:+82134750 | MS.gene013707:CDS |
| GGAAGTACTTCTAAAGACAT+TGG | 0.522331 | 3.4:+82134582 | MS.gene013707:CDS |
| TCATTTACTAAGATGTTACA+AGG | 0.524417 | 3.4:+82135564 | MS.gene013707:CDS |
| TTGGAGTTATTTAGGAGAAG+AGG | 0.526196 | 3.4:+82133558 | MS.gene013707:CDS |
| GAGTATCTTGCTGGAACTGG+TGG | 0.526825 | 3.4:+82134561 | MS.gene013707:CDS |
| GATTATTATTGTTCCAAACA+AGG | 0.530481 | 3.4:+82133271 | MS.gene013707:CDS |
| ATGTTAGCAAGGATGGAGAA+TGG | 0.532233 | 3.4:+82133389 | MS.gene013707:CDS |
| TAGGTGAAGTTGCTTATCAA+AGG | 0.533461 | 3.4:+82133326 | MS.gene013707:CDS |
| AAGAGTAAATTAATTAAAGG+TGG | 0.536645 | 3.4:+82133643 | MS.gene013707:CDS |
| AATGGATCACAACCATGCTT+TGG | 0.538091 | 3.4:+82133429 | MS.gene013707:CDS |
| TAATAAGAAATGACTTAGAC+TGG | 0.538323 | 3.4:-82134382 | None:intergenic |
| ATTATTATTGTTCCAAACAA+GGG | 0.540953 | 3.4:+82133272 | MS.gene013707:CDS |
| AGGTGAAGTTGCTTATCAAA+GGG | 0.546039 | 3.4:+82133327 | MS.gene013707:CDS |
| AACATTAGAAGGCCCATCCA+TGG | 0.546919 | 3.4:-82135351 | None:intergenic |
| TACAGATCAAGATGGAGCCA+TGG | 0.551336 | 3.4:+82134011 | MS.gene013707:CDS |
| TCAAATCATATGTATTAGTA+CGG | 0.557489 | 3.4:-82133840 | None:intergenic |
| GCGACAATTAGAGACTGAAA+AGG | 0.558235 | 3.4:+82134431 | MS.gene013707:CDS |
| ATATGTATTAGTACGGTAAG+TGG | 0.559004 | 3.4:-82133833 | None:intergenic |
| AAGGACAAATTGTAAAGCAA+TGG | 0.564077 | 3.4:+82133357 | MS.gene013707:CDS |
| ATAAAGTCTATGGTGAATGC+TGG | 0.565519 | 3.4:+82133517 | MS.gene013707:CDS |
| GCTCGAGCGGCACCAAAGCA+TGG | 0.565748 | 3.4:-82133441 | None:intergenic |
| GGTTATCATTCCTCAAATTG+GGG | 0.572895 | 3.4:+82135522 | MS.gene013707:CDS |
| TGGTCAAGTTGTGCATAGCA+AGG | 0.581013 | 3.4:+82133141 | MS.gene013707:CDS |
| TTCTAATGTTCTCAATAACA+TGG | 0.585453 | 3.4:+82135364 | MS.gene013707:CDS |
| ACCATCTCTCCAAAACACAT+TGG | 0.590535 | 3.4:-82133761 | None:intergenic |
| GGTGCGATTTAATGTTAGCA+AGG | 0.593147 | 3.4:+82133378 | MS.gene013707:CDS |
| ATCTTAGTAAATGAAATGGA+TGG | 0.594963 | 3.4:-82135555 | None:intergenic |
| TCTCACTGATATTTATGATG+CGG | 0.607441 | 3.4:-82134482 | None:intergenic |
| TTAAGATCACCAAAATGAGA+AGG | 0.607446 | 3.4:-82134105 | None:intergenic |
| CTGCACACTATAGTAGAACA+TGG | 0.618082 | 3.4:-82133716 | None:intergenic |
| ATGGAACACTGCATATAGCA+AGG | 0.620002 | 3.4:+82134278 | MS.gene013707:CDS |
| TTGAAAAGATGGTAAACAAG+TGG | 0.620155 | 3.4:+82134409 | MS.gene013707:CDS |
| TTTAAGAACAATGAACCAGA+AGG | 0.621796 | 3.4:+82133295 | MS.gene013707:CDS |
| ACAACTGATCGTTGCAGCAG+AGG | 0.638921 | 3.4:-82134682 | None:intergenic |
| GAACCAGAAGGAGAAATCGT+AGG | 0.643994 | 3.4:+82133307 | MS.gene013707:CDS |
| AGAAAAGTATCAGAAACCAA+AGG | 0.645801 | 3.4:+82133487 | MS.gene013707:CDS |
| AACAAATGTCTTTGCTCGAG+CGG | 0.656974 | 3.4:-82133454 | None:intergenic |
| TATAACTTATACCAAGAACA+TGG | 0.669118 | 3.4:+82133172 | MS.gene013707:CDS |
| AAGTACTTCTAAAGACATTG+GGG | 0.673250 | 3.4:+82134584 | MS.gene013707:CDS |
| TATGCCTAATAAGAAACATG+TGG | 0.676676 | 3.4:+82134647 | MS.gene013707:CDS |
| CTGATATTTATGATGCGGGG+AGG | 0.680172 | 3.4:-82134477 | None:intergenic |
| AAAGTATCAGAAACCAAAGG+AGG | 0.690747 | 3.4:+82133490 | MS.gene013707:CDS |
| TCACTGATATTTATGATGCG+GGG | 0.700675 | 3.4:-82134480 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTTACATAATTTAATA+GGG | + | chr3.4:82135501-82135520 | MS.gene013707:intron | 10.0% |
| !! | CTATTAAATTATGTAAAAGA+AGG | - | chr3.4:82135502-82135521 | None:intergenic | 15.0% |
| !! | GAAAAGAGTAAATTAATTAA+AGG | + | chr3.4:82133640-82133659 | MS.gene013707:CDS | 15.0% |
| !!! | CTTCTTTTACATAATTTAAT+AGG | + | chr3.4:82135500-82135519 | MS.gene013707:intron | 15.0% |
| !!! | GTTTTTTTATAATCTAGTTT+TGG | + | chr3.4:82134938-82134957 | MS.gene013707:intron | 15.0% |
| !! | AAAAAATTTCACTCAAAATG+AGG | + | chr3.4:82135079-82135098 | MS.gene013707:intron | 20.0% |
| !! | AAAACAATCATAATCAACTT+TGG | - | chr3.4:82133791-82133810 | None:intergenic | 20.0% |
| !! | AAGAGTAAATTAATTAAAGG+TGG | + | chr3.4:82133643-82133662 | MS.gene013707:CDS | 20.0% |
| !! | ACTTAAAAGTTATCAAGAAA+TGG | - | chr3.4:82135452-82135471 | None:intergenic | 20.0% |
| !! | ATTATTATTGTTCCAAACAA+GGG | + | chr3.4:82133272-82133291 | MS.gene013707:CDS | 20.0% |
| !! | GATAAATTATAAACCTCTAA+AGG | - | chr3.4:82135428-82135447 | None:intergenic | 20.0% |
| !! | TAACATCTTAGTAAATGAAA+TGG | - | chr3.4:82135562-82135581 | None:intergenic | 20.0% |
| !! | TCAAATCATATGTATTAGTA+CGG | - | chr3.4:82133843-82133862 | None:intergenic | 20.0% |
| !! | TGTATAAAATTCGTCATAAA+TGG | + | chr3.4:82134259-82134278 | MS.gene013707:CDS | 20.0% |
| !!! | AAAGTTGATTATGATTGTTT+TGG | + | chr3.4:82133790-82133809 | MS.gene013707:CDS | 20.0% |
| !!! | TGATCTGTAAAAAATGTTTT+TGG | - | chr3.4:82134000-82134019 | None:intergenic | 20.0% |
| ! | AGTTATGAATGATTTCATTG+TGG | + | chr3.4:82135469-82135488 | MS.gene013707:intron | 25.0% |
| ! | ATATATGCCATAAGCATAAA+CGG | - | chr3.4:82134074-82134093 | None:intergenic | 25.0% |
| ! | ATCTTAGTAAATGAAATGGA+TGG | - | chr3.4:82135558-82135577 | None:intergenic | 25.0% |
| ! | ATGTTATTGAGAACATTAGA+AGG | - | chr3.4:82135365-82135384 | None:intergenic | 25.0% |
| ! | CAAGTGATTGATTAAAGATT+GGG | - | chr3.4:82133674-82133693 | None:intergenic | 25.0% |
| ! | CTTATTAGCATTTGAAAAGA+TGG | + | chr3.4:82134398-82134417 | MS.gene013707:CDS | 25.0% |
| ! | GATTATTATTGTTCCAAACA+AGG | + | chr3.4:82133271-82133290 | MS.gene013707:CDS | 25.0% |
| ! | GTATGAAAGTTACTAATGTT+TGG | + | chr3.4:82133539-82133558 | MS.gene013707:CDS | 25.0% |
| ! | TAATAAGAAATGACTTAGAC+TGG | - | chr3.4:82134385-82134404 | None:intergenic | 25.0% |
| ! | TATAACTTATACCAAGAACA+TGG | + | chr3.4:82133172-82133191 | MS.gene013707:CDS | 25.0% |
| ! | TCATTTACTAAGATGTTACA+AGG | + | chr3.4:82135564-82135583 | MS.gene013707:CDS | 25.0% |
| ! | TTCTAATGTTCTCAATAACA+TGG | + | chr3.4:82135364-82135383 | MS.gene013707:CDS | 25.0% |
| !! | AAACTTCTGTTTCTTTCAAT+TGG | + | chr3.4:82133935-82133954 | MS.gene013707:CDS | 25.0% |
| !! | ACTAATGTTTGGAGTTATTT+AGG | + | chr3.4:82133550-82133569 | MS.gene013707:CDS | 25.0% |
| !!! | AAAAGTTTCATGGTTTGTTT+TGG | + | chr3.4:82134136-82134155 | MS.gene013707:CDS | 25.0% |
| !!! | ACATTTTTTACAGATCAAGA+TGG | + | chr3.4:82134003-82134022 | MS.gene013707:CDS | 25.0% |
| !!! | TTGAGTGAAATTTTTTTCAC+TGG | - | chr3.4:82135075-82135094 | None:intergenic | 25.0% |
| !!! | TTGGCTATTTAAAGTGTTTT+TGG | + | chr3.4:82133954-82133973 | MS.gene013707:CDS | 25.0% |
| AACTCTGATCAAAAGTTTCA+TGG | + | chr3.4:82134126-82134145 | MS.gene013707:CDS | 30.0% | |
| AAGAAACTCAACAAATCATG+TGG | + | chr3.4:82134976-82134995 | MS.gene013707:intron | 30.0% | |
| AAGATGGTCAAAAAAAGCAA+GGG | + | chr3.4:82134806-82134825 | MS.gene013707:intron | 30.0% | |
| AAGGACAAATTGTAAAGCAA+TGG | + | chr3.4:82133357-82133376 | MS.gene013707:CDS | 30.0% | |
| ACAAGCTTCAAAATCACAAA+TGG | + | chr3.4:82134226-82134245 | MS.gene013707:CDS | 30.0% | |
| ACTAAGATGTTACAAGGAAT+TGG | + | chr3.4:82135570-82135589 | MS.gene013707:CDS | 30.0% | |
| ACTACCACATGTTTCTTATT+AGG | - | chr3.4:82134654-82134673 | None:intergenic | 30.0% | |
| AGTATTTAAACCCCAATTTG+AGG | - | chr3.4:82135535-82135554 | None:intergenic | 30.0% | |
| ATATGTATTAGTACGGTAAG+TGG | - | chr3.4:82133836-82133855 | None:intergenic | 30.0% | |
| ATTCAGGTATGTATGTATGT+AGG | + | chr3.4:82135609-82135628 | MS.gene013707:intron | 30.0% | |
| ATTGTTCTTAAACCCTTGTT+TGG | - | chr3.4:82133287-82133306 | None:intergenic | 30.0% | |
| CATTTGCAAAATGTCATGTT+TGG | + | chr3.4:82133892-82133911 | MS.gene013707:CDS | 30.0% | |
| GATTCAAAAGAAGAGTTTGA+AGG | + | chr3.4:82134177-82134196 | MS.gene013707:CDS | 30.0% | |
| GCAAGTGATTGATTAAAGAT+TGG | - | chr3.4:82133675-82133694 | None:intergenic | 30.0% | |
| TATGCCTAATAAGAAACATG+TGG | + | chr3.4:82134647-82134666 | MS.gene013707:CDS | 30.0% | |
| TATTCAGTTATATTGCATGC+AGG | + | chr3.4:82135682-82135701 | MS.gene013707:intron | 30.0% | |
| TCAACAAATCATGTGGAAAT+TGG | + | chr3.4:82134983-82135002 | MS.gene013707:intron | 30.0% | |
| TCAGAAAATGCAATGAACAA+TGG | + | chr3.4:82134876-82134895 | MS.gene013707:intron | 30.0% | |
| TCATAATAGCATTGCGATAA+AGG | - | chr3.4:82134917-82134936 | None:intergenic | 30.0% | |
| TCTCACTGATATTTATGATG+CGG | - | chr3.4:82134485-82134504 | None:intergenic | 30.0% | |
| TGACCAAGAAAAATATCTCT+GGG | - | chr3.4:82133127-82133146 | None:intergenic | 30.0% | |
| TGTCGAAAGTTTGATTCAAT+GGG | + | chr3.4:82134708-82134727 | MS.gene013707:CDS | 30.0% | |
| TTAAGATCACCAAAATGAGA+AGG | - | chr3.4:82134108-82134127 | None:intergenic | 30.0% | |
| TTGAAAAGATGGTAAACAAG+TGG | + | chr3.4:82134409-82134428 | MS.gene013707:CDS | 30.0% | |
| TTGACCAAGAAAAATATCTC+TGG | - | chr3.4:82133128-82133147 | None:intergenic | 30.0% | |
| TTGCGAATTTACAACATCAA+AGG | + | chr3.4:82134750-82134769 | MS.gene013707:CDS | 30.0% | |
| TTGTCGAAAGTTTGATTCAA+TGG | + | chr3.4:82134707-82134726 | MS.gene013707:CDS | 30.0% | |
| TTTAAGAACAATGAACCAGA+AGG | + | chr3.4:82133295-82133314 | MS.gene013707:CDS | 30.0% | |
| ! | AAGTACTTCTAAAGACATTG+GGG | + | chr3.4:82134584-82134603 | MS.gene013707:CDS | 30.0% |
| ! | AATGTTCCTTCTACTTCTTT+TGG | + | chr3.4:82135398-82135417 | MS.gene013707:CDS | 30.0% |
| ! | ATCATGTGGAAATTGGTTTA+TGG | + | chr3.4:82134990-82135009 | MS.gene013707:intron | 30.0% |
| ! | GAAGTACTTCTAAAGACATT+GGG | + | chr3.4:82134583-82134602 | MS.gene013707:CDS | 30.0% |
| ! | TTTTATGTTCTTGCCTATCT+TGG | - | chr3.4:82135727-82135746 | None:intergenic | 30.0% |
| ! | TTTTTGAATGAGTATCTTGC+TGG | + | chr3.4:82134552-82134571 | MS.gene013707:CDS | 30.0% |
| !! | AGAAAAGTATCAGAAACCAA+AGG | + | chr3.4:82133487-82133506 | MS.gene013707:CDS | 30.0% |
| !! | GCGAATTACTAAGTTGATAA+TGG | + | chr3.4:82133411-82133430 | MS.gene013707:CDS | 30.0% |
| !! | GGGCATTTTGAAAAAAGAAA+AGG | + | chr3.4:82135173-82135192 | MS.gene013707:intron | 30.0% |
| AATTGAGCTCATTGATGCAT+TGG | - | chr3.4:82135034-82135053 | None:intergenic | 35.0% | |
| AGGGTTATCATTCCTCAAAT+TGG | + | chr3.4:82135520-82135539 | MS.gene013707:intron | 35.0% | |
| AGGTGAAGTTGCTTATCAAA+GGG | + | chr3.4:82133327-82133346 | MS.gene013707:CDS | 35.0% | |
| AGTTATTTAGGAGAAGAGGT+TGG | + | chr3.4:82133562-82133581 | MS.gene013707:CDS | 35.0% | |
| ATAAAGTCTATGGTGAATGC+TGG | + | chr3.4:82133517-82133536 | MS.gene013707:CDS | 35.0% | |
| CATAAACGGTGACATGTATT+TGG | - | chr3.4:82134060-82134079 | None:intergenic | 35.0% | |
| CGATTTAATGTTAGCAAGGA+TGG | + | chr3.4:82133382-82133401 | MS.gene013707:CDS | 35.0% | |
| CTCACTGATATTTATGATGC+GGG | - | chr3.4:82134484-82134503 | None:intergenic | 35.0% | |
| GAAAATGCAATGAACAATGG+TGG | + | chr3.4:82134879-82134898 | MS.gene013707:intron | 35.0% | |
| GAAGATGGTCAAAAAAAGCA+AGG | + | chr3.4:82134805-82134824 | MS.gene013707:intron | 35.0% | |
| GGGTTATCATTCCTCAAATT+GGG | + | chr3.4:82135521-82135540 | MS.gene013707:intron | 35.0% | |
| GGTTATCATTCCTCAAATTG+GGG | + | chr3.4:82135522-82135541 | MS.gene013707:CDS | 35.0% | |
| TAGGTGAAGTTGCTTATCAA+AGG | + | chr3.4:82133326-82133345 | MS.gene013707:CDS | 35.0% | |
| TCACTGATATTTATGATGCG+GGG | - | chr3.4:82134483-82134502 | None:intergenic | 35.0% | |
| TGATGATTTACCCCAACAAA+AGG | - | chr3.4:82133874-82133893 | None:intergenic | 35.0% | |
| TTGGAGTTATTTAGGAGAAG+AGG | + | chr3.4:82133558-82133577 | MS.gene013707:CDS | 35.0% | |
| ! | AAAGTATCAGAAACCAAAGG+AGG | + | chr3.4:82133490-82133509 | MS.gene013707:CDS | 35.0% |
| ! | AAGCCCAGAGATATTTTTCT+TGG | + | chr3.4:82133121-82133140 | MS.gene013707:CDS | 35.0% |
| ! | ACCAATACTTTCTGAGAAGA+TGG | + | chr3.4:82134790-82134809 | MS.gene013707:intron | 35.0% |
| ! | ACCATCTTCTCAGAAAGTAT+TGG | - | chr3.4:82134794-82134813 | None:intergenic | 35.0% |
| ! | ATGTGGAAATTGGTTTATGG+TGG | + | chr3.4:82134993-82135012 | MS.gene013707:intron | 35.0% |
| ! | CACGTTTAACCAATGTGTTT+TGG | + | chr3.4:82133752-82133771 | MS.gene013707:CDS | 35.0% |
| ! | CATTGGTTAAACGTGATTCT+TGG | - | chr3.4:82133747-82133766 | None:intergenic | 35.0% |
| ! | TGATATGTGCTCCTTTTGTT+GGG | + | chr3.4:82133860-82133879 | MS.gene013707:CDS | 35.0% |
| ! | TTGATATGTGCTCCTTTTGT+TGG | + | chr3.4:82133859-82133878 | MS.gene013707:CDS | 35.0% |
| ! | TTGTTCCATTAGTTCTTCCA+TGG | + | chr3.4:82135334-82135353 | MS.gene013707:CDS | 35.0% |
| ! | TTTTAGTGTGAGAAAAGGGA+AGG | + | chr3.4:82133207-82133226 | MS.gene013707:CDS | 35.0% |
| !! | ATGGGTTTTAGTGTGAGAAA+AGG | + | chr3.4:82133202-82133221 | MS.gene013707:CDS | 35.0% |
| !! | CACATGTAACTCATTGATTC+AGG | + | chr3.4:82135593-82135612 | MS.gene013707:CDS | 35.0% |
| !! | GGAAGTACTTCTAAAGACAT+TGG | + | chr3.4:82134582-82134601 | MS.gene013707:CDS | 35.0% |
| !! | TGGGTTTTAGTGTGAGAAAA+GGG | + | chr3.4:82133203-82133222 | MS.gene013707:CDS | 35.0% |
| !!! | AAAGTGTTTTTGGAGAGCAT+GGG | + | chr3.4:82133964-82133983 | MS.gene013707:CDS | 35.0% |
| !!! | TAAAGTGTTTTTGGAGAGCA+TGG | + | chr3.4:82133963-82133982 | MS.gene013707:CDS | 35.0% |
| !!! | TAATCTAGTTTTGGATAGCC+AGG | + | chr3.4:82134947-82134966 | MS.gene013707:intron | 35.0% |
| !!! | TGATTGTTTTGGAGATGTTG+TGG | + | chr3.4:82133801-82133820 | MS.gene013707:CDS | 35.0% |
| !!! | TTGTTTTGGAAATGCATGTC+AGG | + | chr3.4:82134150-82134169 | MS.gene013707:CDS | 35.0% |
| AACAAATGTCTTTGCTCGAG+CGG | - | chr3.4:82133457-82133476 | None:intergenic | 40.0% | |
| AATGAGTATCTTGCTGGAAC+TGG | + | chr3.4:82134558-82134577 | MS.gene013707:CDS | 40.0% | |
| AATGGATCACAACCATGCTT+TGG | + | chr3.4:82133429-82133448 | MS.gene013707:CDS | 40.0% | |
| ACCATCTCTCCAAAACACAT+TGG | - | chr3.4:82133764-82133783 | None:intergenic | 40.0% | |
| AGACTTTATGAGACCTCCTT+TGG | - | chr3.4:82133506-82133525 | None:intergenic | 40.0% | |
| AGCATTGCGATAAAGGATCA+TGG | - | chr3.4:82134910-82134929 | None:intergenic | 40.0% | |
| AGGAGGTCTCATAAAGTCTA+TGG | + | chr3.4:82133507-82133526 | MS.gene013707:CDS | 40.0% | |
| AGGTCTAATACTCGCATGAA+AGG | + | chr3.4:82135152-82135171 | MS.gene013707:intron | 40.0% | |
| ATGGAACACTGCATATAGCA+AGG | + | chr3.4:82134278-82134297 | MS.gene013707:CDS | 40.0% | |
| ATGTTAGCAAGGATGGAGAA+TGG | + | chr3.4:82133389-82133408 | MS.gene013707:CDS | 40.0% | |
| CAAGAACATGGCTTCAAGAT+GGG | + | chr3.4:82133184-82133203 | MS.gene013707:CDS | 40.0% | |
| CAAGTAGTGCTTTCCAAGAT+AGG | + | chr3.4:82135711-82135730 | MS.gene013707:CDS | 40.0% | |
| CATGTCACCGTTTATGCTTA+TGG | + | chr3.4:82134064-82134083 | MS.gene013707:CDS | 40.0% | |
| CTGCACACTATAGTAGAACA+TGG | - | chr3.4:82133719-82133738 | None:intergenic | 40.0% | |
| GCGACAATTAGAGACTGAAA+AGG | + | chr3.4:82134431-82134450 | MS.gene013707:CDS | 40.0% | |
| GGTCTAATACTCGCATGAAA+GGG | + | chr3.4:82135153-82135172 | MS.gene013707:intron | 40.0% | |
| GGTGCGATTTAATGTTAGCA+AGG | + | chr3.4:82133378-82133397 | MS.gene013707:CDS | 40.0% | |
| GTTGAGTTTCTTTGTGTTCC+TGG | - | chr3.4:82134968-82134987 | None:intergenic | 40.0% | |
| TATTTAGGAGAAGAGGTTGG+TGG | + | chr3.4:82133565-82133584 | MS.gene013707:CDS | 40.0% | |
| ! | CAGAATGCACCTTCTCATTT+TGG | + | chr3.4:82134096-82134115 | MS.gene013707:CDS | 40.0% |
| ! | CCATTAGTTCTTCCATGGAT+GGG | + | chr3.4:82135339-82135358 | MS.gene013707:CDS | 40.0% |
| ! | CTTATCAAAGGGCTGATTCA+AGG | + | chr3.4:82133338-82133357 | MS.gene013707:CDS | 40.0% |
| ! | GATATGTGCTCCTTTTGTTG+GGG | + | chr3.4:82133861-82133880 | MS.gene013707:CDS | 40.0% |
| ! | TCCATTAGTTCTTCCATGGA+TGG | + | chr3.4:82135338-82135357 | MS.gene013707:CDS | 40.0% |
| !! | AAGAAGAGTTTGAAGGCACT+TGG | + | chr3.4:82134184-82134203 | MS.gene013707:CDS | 40.0% |
| !! | CTATCTTGGAAAGCACTACT+TGG | - | chr3.4:82135713-82135732 | None:intergenic | 40.0% |
| !! | CTTCTCAGAAAGTATTGGTC+AGG | - | chr3.4:82134789-82134808 | None:intergenic | 40.0% |
| !! | GTTGGTGGATTTGATAAGCT+TGG | + | chr3.4:82133580-82133599 | MS.gene013707:CDS | 40.0% |
| !! | TTCTTTTGGTGCACCTTTAG+AGG | + | chr3.4:82135412-82135431 | MS.gene013707:CDS | 40.0% |
| !!! | ACCAATGTGTTTTGGAGAGA+TGG | + | chr3.4:82133760-82133779 | MS.gene013707:CDS | 40.0% |
| !!! | ACCTTCCTTTAGTTTTTGCG+CGG | - | chr3.4:82135136-82135155 | None:intergenic | 40.0% |
| AACATTAGAAGGCCCATCCA+TGG | - | chr3.4:82135354-82135373 | None:intergenic | 45.0% | |
| AGTGTGTTAAGTGCGATTGC+CGG | + | chr3.4:82134351-82134370 | MS.gene013707:CDS | 45.0% | |
| CATAACGTCTCCGATTGCTT+TGG | - | chr3.4:82134037-82134056 | None:intergenic | 45.0% | |
| CCAAGAACATGGCTTCAAGA+TGG | + | chr3.4:82133183-82133202 | MS.gene013707:CDS | 45.0% | |
| CCATCTTGAAGCCATGTTCT+TGG | - | chr3.4:82133186-82133205 | None:intergenic | 45.0% | |
| CCCATCCATGGAAGAACTAA+TGG | - | chr3.4:82135342-82135361 | None:intergenic | 45.0% | |
| CTGATATTTATGATGCGGGG+AGG | - | chr3.4:82134480-82134499 | None:intergenic | 45.0% | |
| GAACCAGAAGGAGAAATCGT+AGG | + | chr3.4:82133307-82133326 | MS.gene013707:CDS | 45.0% | |
| GGTGCACCAAAAGAAGTAGA+AGG | - | chr3.4:82135407-82135426 | None:intergenic | 45.0% | |
| TACAGATCAAGATGGAGCCA+TGG | + | chr3.4:82134011-82134030 | MS.gene013707:CDS | 45.0% | |
| TCACCTACGATTTCTCCTTC+TGG | - | chr3.4:82133313-82133332 | None:intergenic | 45.0% | |
| ! | TGGTCAAGTTGTGCATAGCA+AGG | + | chr3.4:82133141-82133160 | MS.gene013707:CDS | 45.0% |
| ACAACTGATCGTTGCAGCAG+AGG | - | chr3.4:82134685-82134704 | None:intergenic | 50.0% | |
| GAGTATCTTGCTGGAACTGG+TGG | + | chr3.4:82134561-82134580 | MS.gene013707:CDS | 50.0% | |
| GCCGCGCAAAAACTAAAGGA+AGG | + | chr3.4:82135132-82135151 | MS.gene013707:intron | 50.0% | |
| ! | ACTTAGACTGGTTGCTGCTC+CGG | - | chr3.4:82134373-82134392 | None:intergenic | 50.0% |
| CCTCGCCGCGCAAAAACTAA+AGG | + | chr3.4:82135128-82135147 | MS.gene013707:intron | 55.0% | |
| GGAGCCATGGCCAAAGCAAT+CGG | + | chr3.4:82134024-82134043 | MS.gene013707:CDS | 55.0% | |
| GTCTCCGATTGCTTTGGCCA+TGG | - | chr3.4:82134031-82134050 | None:intergenic | 55.0% | |
| ! | TGATGCGGGGAGGCATACTT+TGG | - | chr3.4:82134470-82134489 | None:intergenic | 55.0% |
| !!! | CCTTTAGTTTTTGCGCGGCG+AGG | - | chr3.4:82135131-82135150 | None:intergenic | 55.0% |
| GCTCGAGCGGCACCAAAGCA+TGG | - | chr3.4:82133444-82133463 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 82133085 | 82135754 | 82133085 | ID=MS.gene013707 |
| chr3.4 | mRNA | 82133085 | 82135754 | 82133085 | ID=MS.gene013707.t1;Parent=MS.gene013707 |
| chr3.4 | exon | 82133085 | 82134771 | 82133085 | ID=MS.gene013707.t1.exon1;Parent=MS.gene013707.t1 |
| chr3.4 | CDS | 82133085 | 82134771 | 82133085 | ID=cds.MS.gene013707.t1;Parent=MS.gene013707.t1 |
| chr3.4 | exon | 82135312 | 82135433 | 82135312 | ID=MS.gene013707.t1.exon2;Parent=MS.gene013707.t1 |
| chr3.4 | CDS | 82135312 | 82135433 | 82135312 | ID=cds.MS.gene013707.t1;Parent=MS.gene013707.t1 |
| chr3.4 | exon | 82135522 | 82135614 | 82135522 | ID=MS.gene013707.t1.exon3;Parent=MS.gene013707.t1 |
| chr3.4 | CDS | 82135522 | 82135614 | 82135522 | ID=cds.MS.gene013707.t1;Parent=MS.gene013707.t1 |
| chr3.4 | exon | 82135704 | 82135754 | 82135704 | ID=MS.gene013707.t1.exon4;Parent=MS.gene013707.t1 |
| chr3.4 | CDS | 82135704 | 82135754 | 82135704 | ID=cds.MS.gene013707.t1;Parent=MS.gene013707.t1 |
| Gene Sequence |
| Protein sequence |
