AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013823

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013823.t1 MTR_3g088110 97.222 288 6 1 1 286 1 288 0.0 587
MS.gene013823.t1 MTR_8g094580 61.000 300 86 5 1 284 1 285 1.39e-118 342
MS.gene013823.t1 MTR_3g096920 59.283 307 89 6 1 286 1 292 4.80e-113 328
MS.gene013823.t1 MTR_3g096920 52.907 344 89 7 1 286 1 329 3.71e-105 309
MS.gene013823.t1 MTR_8g094580 57.317 246 74 5 55 284 1 231 6.11e-84 251
MS.gene013823.t1 MTR_2g080010 62.189 201 52 5 6 195 14 201 9.03e-81 248
MS.gene013823.t1 MTR_8g059170 70.552 163 46 2 3 164 10 171 3.73e-78 240
MS.gene013823.t1 MTR_7g085220 62.032 187 59 3 4 178 5 191 4.77e-78 240
MS.gene013823.t1 MTR_2g079990 65.698 172 55 2 3 173 12 180 7.71e-78 240
MS.gene013823.t1 MTR_2157s0010 66.871 163 44 2 7 159 8 170 4.70e-76 233
MS.gene013823.t1 MTR_4g089135 66.480 179 35 3 6 160 14 191 1.01e-75 234
MS.gene013823.t1 MTR_2g079990 57.868 197 57 2 3 173 12 208 5.75e-74 231
MS.gene013823.t1 MTR_5g041940 57.592 191 69 4 5 187 1 187 1.57e-72 224
MS.gene013823.t1 MTR_2g093810 61.538 169 61 2 3 167 10 178 4.09e-72 224
MS.gene013823.t1 MTR_7g100990 64.198 162 54 2 3 160 7 168 1.03e-71 224
MS.gene013823.t1 MTR_4g081870 62.893 159 57 2 2 158 4 162 2.59e-70 218
MS.gene013823.t1 MTR_5g040420 39.841 251 126 6 7 241 14 255 1.95e-58 191
MS.gene013823.t1 MTR_6g012670 52.071 169 79 2 4 171 17 184 5.87e-58 188
MS.gene013823.t1 MTR_6g084430 55.901 161 65 2 4 163 2 157 1.01e-57 188
MS.gene013823.t1 MTR_3g109340 48.276 203 93 3 2 199 17 212 3.61e-57 187
MS.gene013823.t1 MTR_3g109340 48.039 204 93 3 2 199 17 213 5.28e-57 187
MS.gene013823.t1 MTR_4g108760 51.786 168 79 2 4 170 14 180 3.07e-56 185
MS.gene013823.t1 MTR_2g064090 51.872 187 77 6 5 188 4 180 4.96e-56 184
MS.gene013823.t1 MTR_8g467490 46.040 202 78 5 9 192 16 204 6.96e-56 185
MS.gene013823.t1 MTR_6g011860 52.147 163 70 2 7 161 15 177 1.12e-55 184
MS.gene013823.t1 MTR_5g076850 57.500 160 62 4 5 161 4 160 1.65e-55 189
MS.gene013823.t1 MTR_3g435150 49.718 177 87 2 4 179 13 188 2.79e-55 181
MS.gene013823.t1 MTR_3g064580 53.409 176 77 3 5 177 4 177 6.97e-55 188
MS.gene013823.t1 MTR_3g070030 50.000 162 80 1 4 164 16 177 1.36e-54 181
MS.gene013823.t1 MTR_7g005280 55.294 170 65 3 4 170 12 173 2.61e-54 177
MS.gene013823.t1 MTR_1g008740 52.941 170 66 4 4 166 24 186 2.78e-54 180
MS.gene013823.t1 MTR_1g008740 52.941 170 66 4 4 166 10 172 2.93e-54 179
MS.gene013823.t1 MTR_2g062730 51.220 164 70 3 2 160 5 163 4.42e-54 179
MS.gene013823.t1 MTR_7g085260 52.326 172 75 3 5 170 15 185 5.12e-54 180
MS.gene013823.t1 MTR_4g134460 55.000 160 64 3 9 166 56 209 9.50e-54 181
MS.gene013823.t1 MTR_2g078700 54.658 161 67 3 4 160 20 178 1.70e-53 178
MS.gene013823.t1 MTR_6g477900 46.429 196 91 5 3 187 2 194 2.95e-53 174
MS.gene013823.t1 MTR_5g090970 52.201 159 66 3 9 157 20 178 2.28e-51 171
MS.gene013823.t1 MTR_5g012080 50.955 157 68 3 7 158 7 159 3.71e-51 171
MS.gene013823.t1 MTR_4g035590 47.701 174 81 3 7 176 8 175 5.14e-51 171
MS.gene013823.t1 MTR_4g101680 49.390 164 74 3 1 160 1 159 7.21e-51 171
MS.gene013823.t1 MTR_4g036030 48.171 164 76 3 1 160 1 159 2.41e-50 169
MS.gene013823.t1 MTR_6g032770 44.762 210 105 5 5 210 16 218 2.95e-50 170
MS.gene013823.t1 MTR_8g076110 49.375 160 72 3 7 162 6 160 4.82e-50 167
MS.gene013823.t1 MTR_5g090970 52.201 159 65 4 9 157 20 177 8.55e-50 167
MS.gene013823.t1 MTR_1g069805 50.955 157 67 2 7 160 10 159 2.01e-49 165
MS.gene013823.t1 MTR_5g021710 50.633 158 69 3 7 160 8 160 2.27e-49 167
MS.gene013823.t1 MTR_2g068880 39.544 263 129 8 9 245 24 282 7.73e-49 164
MS.gene013823.t1 MTR_2g064470 40.476 252 116 7 4 253 8 227 1.13e-48 164
MS.gene013823.t1 MTR_3g096140 48.148 162 78 3 1 159 1 159 2.22e-48 162
MS.gene013823.t1 MTR_7g011120 45.562 169 81 3 4 163 5 171 3.05e-48 163
MS.gene013823.t1 MTR_5g014300 52.174 161 61 5 7 157 6 160 5.40e-48 163
MS.gene013823.t1 MTR_8g024480 44.751 181 90 3 6 176 14 194 5.40e-48 166
MS.gene013823.t1 MTR_7g011130 44.571 175 80 3 4 163 16 188 1.23e-47 162
MS.gene013823.t1 MTR_2g068920 50.588 170 70 4 9 164 23 192 1.39e-47 160
MS.gene013823.t1 MTR_1g096430 48.447 161 74 3 1 157 1 156 1.66e-47 162
MS.gene013823.t1 MTR_3g096140 48.148 162 78 3 1 159 1 159 1.77e-47 162
MS.gene013823.t1 MTR_7g097090 50.980 153 65 2 7 156 10 155 2.37e-47 160
MS.gene013823.t1 MTR_3g116070 51.634 153 63 3 3 144 19 171 1.52e-46 160
MS.gene013823.t1 MTR_4g075980 46.386 166 77 3 1 162 9 166 3.76e-46 157
MS.gene013823.t1 MTR_8g099750 48.734 158 74 3 6 158 13 168 4.70e-46 155
MS.gene013823.t1 MTR_5g069030 38.346 266 141 7 6 264 24 273 4.70e-46 164
MS.gene013823.t1 MTR_3g098810 48.128 187 79 6 6 178 13 195 5.88e-46 155
MS.gene013823.t1 MTR_1g090720 50.955 157 71 3 7 157 42 198 2.56e-45 159
MS.gene013823.t1 MTR_4g098630 45.714 175 86 3 6 174 5 176 3.82e-45 155
MS.gene013823.t1 MTR_1g090723 48.780 164 74 6 9 168 10 167 4.08e-45 161
MS.gene013823.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 5.63e-45 155
MS.gene013823.t1 MTR_1g090723 48.780 164 73 6 9 168 10 166 1.58e-44 159
MS.gene013823.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 1.64e-44 156
MS.gene013823.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 1.83e-44 156
MS.gene013823.t1 MTR_1g097300 50.323 155 69 4 9 159 21 171 2.35e-44 158
MS.gene013823.t1 MTR_1g090723 48.780 164 73 6 9 168 10 166 2.52e-44 159
MS.gene013823.t1 MTR_0036s0150 49.405 168 74 6 5 168 3 163 2.66e-44 157
MS.gene013823.t1 MTR_3g093050 45.699 186 91 4 7 187 22 202 6.40e-44 157
MS.gene013823.t1 MTR_3g093050 46.196 184 89 4 7 185 22 200 7.54e-44 157
MS.gene013823.t1 MTR_3g093040 46.250 160 76 4 3 157 104 258 2.10e-42 148
MS.gene013823.t1 MTR_2g086880 48.649 148 64 4 9 154 20 157 1.87e-41 150
MS.gene013823.t1 MTR_2g086880 48.649 148 64 4 9 154 20 157 2.28e-41 149
MS.gene013823.t1 MTR_8g093580 36.929 241 140 8 6 241 5 238 2.81e-41 149
MS.gene013823.t1 MTR_3g098810 53.285 137 57 2 6 137 13 147 3.73e-41 140
MS.gene013823.t1 MTR_3g070040 43.636 165 84 4 4 164 5 164 2.89e-40 143
MS.gene013823.t1 MTR_8g023840 47.403 154 66 5 7 154 11 155 1.86e-37 137
MS.gene013823.t1 MTR_3g096140 45.390 141 71 3 22 159 1 138 4.79e-37 134
MS.gene013823.t1 MTR_4g052620 35.294 221 120 5 7 204 5 225 8.25e-35 126
MS.gene013823.t1 MTR_4g094302 42.675 157 76 3 7 157 11 159 2.27e-34 123
MS.gene013823.t1 MTR_4g094302 46.094 128 58 2 7 131 11 130 7.65e-33 118
MS.gene013823.t1 MTR_2g086690 43.030 165 80 6 8 161 5 166 1.01e-32 120
MS.gene013823.t1 MTR_8g023860 41.935 155 75 5 6 154 11 156 4.18e-32 123
MS.gene013823.t1 MTR_7g105170 36.747 166 93 6 7 161 4 168 3.99e-30 114
MS.gene013823.t1 MTR_8g023930 42.038 157 76 5 7 157 24 171 6.04e-30 117
MS.gene013823.t1 MTR_8g023900 39.412 170 89 7 7 170 12 173 9.68e-30 117
MS.gene013823.t1 MTR_8g023900 42.038 157 70 6 10 157 196 340 2.48e-29 116
MS.gene013823.t1 MTR_8g093790 39.264 163 75 6 3 164 6 145 1.44e-27 105
MS.gene013823.t1 MTR_8g023880 36.413 184 81 8 1 164 1 168 4.90e-26 103
MS.gene013823.t1 MTR_7g070140 52.273 88 39 1 60 144 17 104 7.21e-23 92.0
MS.gene013823.t1 MTR_7g083360 33.088 136 84 4 3 134 6 138 9.68e-21 86.7
MS.gene013823.t1 MTR_3g096400 32.121 165 96 4 1 155 1 159 1.54e-20 87.8
MS.gene013823.t1 MTR_7g083330 32.836 134 83 4 5 134 16 146 1.38e-18 82.0
MS.gene013823.t1 MTR_7g083370 30.534 131 84 4 7 133 10 137 2.27e-16 74.7
MS.gene013823.t1 MTR_8g102240 32.237 152 78 6 5 132 45 195 2.66e-12 67.0
MS.gene013823.t1 MTR_8g102240 32.237 152 78 6 5 132 45 195 2.66e-12 67.0
MS.gene013823.t1 MTR_4g078875 28.713 202 102 8 7 173 48 242 3.26e-12 65.9
MS.gene013823.t1 MTR_7g116460 31.515 165 95 8 13 167 11 167 6.20e-12 63.9
MS.gene013823.t1 MTR_1g087190 60.417 48 18 1 9 55 7 54 1.19e-11 59.3
MS.gene013823.t1 MTR_7g070150 47.222 72 31 3 103 174 9 73 1.83e-11 59.7
MS.gene013823.t1 MTR_8g069160 31.034 145 78 6 7 132 68 209 1.88e-11 63.5
MS.gene013823.t1 MTR_4g088245 31.034 145 78 6 7 132 68 209 3.39e-11 63.2
MS.gene013823.t1 MTR_1g093680 34.028 144 74 7 7 132 58 198 4.85e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013823.t1 AT1G01720 70.333 300 64 8 1 286 1 289 2.44e-145 409
MS.gene013823.t1 AT1G77450 62.030 266 53 5 2 264 5 225 3.18e-109 317
MS.gene013823.t1 AT5G08790 64.751 261 55 7 1 253 1 232 2.32e-107 313
MS.gene013823.t1 AT5G63790 55.290 293 78 6 1 286 44 290 1.87e-101 299
MS.gene013823.t1 AT5G63790 55.290 293 78 6 1 286 54 300 3.20e-101 299
MS.gene013823.t1 AT3G04070 61.307 199 63 5 7 194 10 205 1.37e-77 239
MS.gene013823.t1 AT3G15500 64.571 175 58 2 3 176 10 181 1.59e-77 238
MS.gene013823.t1 AT1G52890 50.575 261 94 7 3 231 10 267 1.96e-77 238
MS.gene013823.t1 AT4G27410 54.077 233 89 4 3 220 10 239 2.81e-77 237
MS.gene013823.t1 AT3G04070 57.477 214 63 5 7 194 10 221 3.58e-77 239
MS.gene013823.t1 AT1G61110 69.880 166 39 2 6 160 15 180 1.10e-76 236
MS.gene013823.t1 AT4G27410 50.800 250 88 5 3 220 10 256 5.46e-74 229
MS.gene013823.t1 AT3G15510 69.811 159 35 3 11 157 21 178 9.95e-72 225
MS.gene013823.t1 AT1G69490 63.580 162 57 2 1 160 3 164 7.92e-71 219
MS.gene013823.t1 AT1G52880 67.683 164 43 2 11 164 21 184 2.23e-67 213
MS.gene013823.t1 AT3G18400 55.280 161 67 2 4 163 2 158 1.76e-58 189
MS.gene013823.t1 AT5G61430 52.976 168 77 2 4 170 13 179 2.09e-57 187
MS.gene013823.t1 AT2G33480 59.355 155 54 3 5 158 13 159 7.15e-57 184
MS.gene013823.t1 AT5G07680 52.976 168 77 2 4 170 14 180 4.29e-56 184
MS.gene013823.t1 AT1G26870 48.691 191 81 3 7 188 16 198 5.46e-56 186
MS.gene013823.t1 AT2G02450 55.625 160 63 3 9 166 53 206 5.61e-56 185
MS.gene013823.t1 AT2G02450 55.625 160 63 3 9 166 53 206 7.54e-56 186
MS.gene013823.t1 AT5G07680 53.293 167 76 2 5 170 1 166 7.58e-56 182
MS.gene013823.t1 AT2G33480 58.065 155 58 3 5 158 13 161 1.01e-55 181
MS.gene013823.t1 AT5G39610 55.556 162 70 2 5 165 18 178 2.96e-55 180
MS.gene013823.t1 AT5G39820 48.603 179 71 3 9 166 22 200 3.70e-55 182
MS.gene013823.t1 AT1G65910 52.222 180 77 5 5 178 4 180 4.86e-55 188
MS.gene013823.t1 AT2G43000 53.614 166 73 3 9 173 20 182 7.63e-55 179
MS.gene013823.t1 AT5G53950 55.625 160 55 3 7 157 17 169 1.27e-54 181
MS.gene013823.t1 AT3G15170 51.220 164 76 2 4 164 17 179 4.51e-54 178
MS.gene013823.t1 AT5G13180 53.143 175 72 3 5 176 12 179 6.70e-54 176
MS.gene013823.t1 AT3G04060 56.129 155 65 2 5 157 18 171 9.55e-54 178
MS.gene013823.t1 AT2G24430 53.012 166 65 3 4 163 13 171 1.24e-53 177
MS.gene013823.t1 AT2G24430 53.012 166 65 3 4 163 13 171 1.24e-53 177
MS.gene013823.t1 AT3G03200 53.939 165 68 5 5 165 4 164 1.27e-53 181
MS.gene013823.t1 AT1G76420 53.750 160 67 3 3 159 18 173 1.31e-53 177
MS.gene013823.t1 AT5G18270 56.129 155 65 2 5 157 19 172 4.18e-53 176
MS.gene013823.t1 AT5G17260 53.333 165 69 5 5 165 4 164 4.19e-53 180
MS.gene013823.t1 AT5G18270 56.129 155 65 2 5 157 19 172 7.37e-53 176
MS.gene013823.t1 AT3G17730 50.000 180 79 5 7 178 6 182 1.38e-52 172
MS.gene013823.t1 AT3G29035 62.595 131 48 1 2 131 19 149 4.35e-52 173
MS.gene013823.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene013823.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene013823.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene013823.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene013823.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene013823.t1 AT4G17980 53.205 156 67 3 7 157 6 160 1.85e-51 170
MS.gene013823.t1 AT4G17980 53.205 156 67 3 7 157 6 160 2.76e-51 170
MS.gene013823.t1 AT4G10350 53.205 156 66 3 7 158 9 161 5.92e-51 171
MS.gene013823.t1 AT1G56010 45.361 194 91 4 4 195 16 196 5.52e-50 168
MS.gene013823.t1 AT1G33280 51.923 156 65 3 7 158 8 157 5.82e-50 167
MS.gene013823.t1 AT1G62700 50.000 162 72 3 1 158 1 157 8.22e-50 169
MS.gene013823.t1 AT1G62700 50.000 162 72 3 1 158 1 157 8.22e-50 169
MS.gene013823.t1 AT5G62380 50.000 164 73 3 1 160 1 159 1.04e-49 168
MS.gene013823.t1 AT5G62380 50.000 164 73 3 1 160 1 159 1.04e-49 168
MS.gene013823.t1 AT2G18060 50.000 158 70 3 7 160 9 161 1.31e-49 168
MS.gene013823.t1 AT2G18060 50.000 158 70 3 7 160 9 161 1.31e-49 168
MS.gene013823.t1 AT1G12260 50.307 163 70 4 1 158 1 157 1.33e-49 167
MS.gene013823.t1 AT3G10490 51.948 154 69 3 7 157 27 178 1.45e-49 164
MS.gene013823.t1 AT1G71930 50.323 155 68 3 7 157 9 158 1.81e-49 166
MS.gene013823.t1 AT1G71930 50.323 155 68 3 7 157 9 158 1.81e-49 166
MS.gene013823.t1 AT1G12260 50.307 163 70 4 1 158 1 157 2.28e-49 168
MS.gene013823.t1 AT4G36160 51.282 156 67 3 7 158 10 160 2.58e-49 167
MS.gene013823.t1 AT4G36160 51.282 156 67 3 7 158 10 160 2.58e-49 167
MS.gene013823.t1 AT3G10480 50.943 159 73 3 2 157 22 178 2.66e-49 169
MS.gene013823.t1 AT4G36160 51.282 156 67 3 7 158 14 164 2.85e-49 167
MS.gene013823.t1 AT3G10480 50.314 159 73 3 2 157 22 177 2.87e-49 169
MS.gene013823.t1 AT3G10500 50.588 170 75 4 2 168 4 167 5.64e-49 171
MS.gene013823.t1 AT5G04410 50.588 170 75 4 2 168 4 167 1.05e-48 170
MS.gene013823.t1 AT5G66300 50.314 159 71 3 7 161 12 166 1.16e-48 163
MS.gene013823.t1 AT2G46770 47.904 167 73 4 6 158 15 181 1.27e-48 166
MS.gene013823.t1 AT3G12977 50.323 155 74 3 4 157 15 167 1.46e-48 163
MS.gene013823.t1 AT1G54330 51.534 163 70 3 5 164 4 160 1.50e-48 163
MS.gene013823.t1 AT5G46590 52.903 155 67 4 7 157 6 158 1.51e-48 163
MS.gene013823.t1 AT3G10490 51.948 154 69 3 7 157 27 178 3.07e-48 166
MS.gene013823.t1 AT1G33060 53.205 156 63 4 7 157 24 174 3.60e-48 170
MS.gene013823.t1 AT1G33060 53.205 156 63 4 7 157 24 174 3.72e-48 170
MS.gene013823.t1 AT4G35580 54.487 156 61 4 7 157 9 159 4.01e-48 168
MS.gene013823.t1 AT4G35580 54.487 156 61 4 7 157 9 159 4.07e-48 168
MS.gene013823.t1 AT4G35580 54.487 156 61 4 7 157 9 159 5.01e-48 167
MS.gene013823.t1 AT2G17040 47.590 166 74 4 1 162 1 157 6.85e-48 161
MS.gene013823.t1 AT1G32770 47.273 165 76 3 6 159 15 179 2.72e-47 162
MS.gene013823.t1 AT5G46590 54.286 140 60 2 7 142 6 145 2.74e-47 159
MS.gene013823.t1 AT4G28530 48.538 171 62 3 6 157 9 172 1.14e-46 160
MS.gene013823.t1 AT3G61910 43.956 182 84 5 6 169 10 191 3.19e-46 158
MS.gene013823.t1 AT1G34180 48.466 163 75 5 9 168 18 174 3.86e-46 161
MS.gene013823.t1 AT1G34190 49.080 163 74 5 9 168 18 174 9.27e-46 162
MS.gene013823.t1 AT1G34180 48.466 163 75 5 9 168 18 174 2.44e-45 161
MS.gene013823.t1 AT3G12910 50.000 164 66 5 9 157 23 185 2.59e-45 155
MS.gene013823.t1 AT5G24590 39.608 255 110 9 7 222 13 262 2.80e-45 159
MS.gene013823.t1 AT1G32510 50.000 162 67 4 7 157 6 164 7.30e-45 153
MS.gene013823.t1 AT1G34180 45.143 175 75 5 9 168 18 186 2.45e-44 156
MS.gene013823.t1 AT3G10480 43.229 192 71 4 2 157 22 211 2.92e-44 157
MS.gene013823.t1 AT1G34180 45.143 175 75 5 9 168 18 186 1.37e-43 156
MS.gene013823.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene013823.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene013823.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene013823.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene013823.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene013823.t1 AT3G49530 46.541 159 78 3 7 161 13 168 8.66e-43 151
MS.gene013823.t1 AT5G64060 46.154 156 78 4 7 159 6 158 1.22e-42 149
MS.gene013823.t1 AT3G49530 46.541 159 78 3 7 161 13 168 2.19e-42 151
MS.gene013823.t1 AT1G32870 50.303 165 73 5 7 168 10 168 5.27e-39 143
MS.gene013823.t1 AT1G32870 50.303 165 73 5 7 168 10 168 5.83e-39 143
MS.gene013823.t1 AT1G32870 50.303 165 73 5 7 168 46 204 6.90e-39 143
MS.gene013823.t1 AT2G27300 50.400 125 60 2 7 129 14 138 7.87e-39 139
MS.gene013823.t1 AT3G44290 41.718 163 79 4 9 165 16 168 1.65e-37 132
MS.gene013823.t1 AT5G22290 42.073 164 78 5 9 165 23 176 2.67e-37 135
MS.gene013823.t1 AT3G44290 41.718 163 79 4 9 165 16 168 1.09e-36 133
MS.gene013823.t1 AT5G61430 51.220 123 46 3 55 170 1 116 1.77e-34 126
MS.gene013823.t1 AT5G64530 39.884 173 78 4 5 163 1 161 2.55e-34 123
MS.gene013823.t1 AT5G04395 41.558 154 73 3 2 138 23 176 1.14e-33 121
MS.gene013823.t1 AT5G64530 47.727 132 54 3 5 133 1 120 4.62e-33 119
MS.gene013823.t1 AT2G33480 57.000 100 39 2 60 158 8 104 1.55e-32 119
MS.gene013823.t1 AT3G44350 36.000 225 112 10 1 202 1 216 6.46e-32 118
MS.gene013823.t1 AT5G22380 34.962 266 122 14 1 250 1 231 8.17e-32 118
MS.gene013823.t1 AT1G56010 43.836 146 68 3 55 199 1 133 1.16e-31 118
MS.gene013823.t1 AT4G10350 54.286 105 44 2 55 158 13 114 3.40e-31 118
MS.gene013823.t1 AT4G28530 38.095 168 47 2 6 157 9 135 1.28e-30 117
MS.gene013823.t1 AT3G12977 52.427 103 46 3 56 157 14 114 2.79e-29 111
MS.gene013823.t1 AT3G44350 40.845 142 71 5 1 133 1 138 4.25e-29 108
MS.gene013823.t1 AT4G01520 37.356 174 91 6 8 171 5 170 8.79e-27 106
MS.gene013823.t1 AT4G01550 34.848 198 113 5 10 200 7 195 1.06e-26 108
MS.gene013823.t1 AT4G01540 37.791 172 89 6 10 171 7 170 1.07e-25 105
MS.gene013823.t1 AT4G01540 37.791 172 89 6 10 171 7 170 1.50e-25 105
MS.gene013823.t1 AT4G01540 37.791 172 89 6 10 171 7 170 1.70e-25 105
MS.gene013823.t1 AT4G01540 37.791 172 89 6 10 171 7 170 2.37e-25 105
MS.gene013823.t1 AT3G04420 40.000 130 73 3 5 129 1 130 2.93e-25 102
MS.gene013823.t1 AT3G04420 40.000 130 73 3 5 129 1 130 7.41e-25 102
MS.gene013823.t1 AT1G02230 40.000 130 67 5 8 129 4 130 8.29e-24 99.8
MS.gene013823.t1 AT2G43000 48.113 106 51 3 69 173 2 104 1.72e-23 95.5
MS.gene013823.t1 AT5G14000 33.333 180 103 5 5 181 13 178 3.66e-23 94.7
MS.gene013823.t1 AT5G14000 37.241 145 86 3 5 146 13 155 1.15e-22 92.0
MS.gene013823.t1 AT1G02220 38.462 130 72 4 5 129 1 127 1.07e-20 91.3
MS.gene013823.t1 AT1G02250 40.000 130 67 5 8 129 4 130 1.53e-20 90.5
MS.gene013823.t1 AT1G01010 35.185 162 74 7 10 154 6 153 5.36e-20 89.7
MS.gene013823.t1 AT3G10490 50.633 79 36 2 80 157 2 78 5.09e-18 83.2
MS.gene013823.t1 AT3G10490 50.633 79 36 2 80 157 2 78 5.09e-18 83.2
MS.gene013823.t1 AT3G56530 33.333 159 91 6 4 155 49 199 1.80e-17 81.3
MS.gene013823.t1 AT5G50820 35.821 134 69 5 5 131 15 138 2.32e-17 78.6
MS.gene013823.t1 AT3G04430 37.121 132 68 5 13 130 6 136 1.10e-15 74.3
MS.gene013823.t1 AT2G18060 44.156 77 37 2 85 160 2 73 4.47e-15 73.9
MS.gene013823.t1 AT4G29230 33.775 151 74 7 7 132 48 197 4.55e-13 69.3
MS.gene013823.t1 AT4G29230 33.775 151 74 7 7 132 47 196 4.58e-13 69.3
MS.gene013823.t1 AT4G29230 33.775 151 74 7 7 132 48 197 4.62e-13 69.3
MS.gene013823.t1 AT5G22290 41.860 86 34 4 86 165 2 77 2.28e-12 65.9
MS.gene013823.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.14e-11 65.1
MS.gene013823.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.27e-11 65.1
MS.gene013823.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.51e-11 64.7
MS.gene013823.t1 AT5G14490 29.101 189 96 9 7 169 55 231 2.24e-11 63.9
MS.gene013823.t1 AT5G14490 29.101 189 96 9 7 169 58 234 2.44e-11 63.9
MS.gene013823.t1 AT5G14490 29.101 189 96 9 7 169 55 231 2.87e-11 63.2
MS.gene013823.t1 AT5G14490 29.101 189 96 9 7 169 58 234 3.46e-11 63.5

Find 96 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCAATGGATTAGTATTT+TGG 0.127740 3.1:-71077934 None:intergenic
CGCAAACTACGGCTGGAATT+AGG 0.167335 3.1:+71077723 MS.gene013823:CDS
TTTCAATGCTCAAAAGGTTT+TGG 0.220852 3.1:-71077975 None:intergenic
GCCACCCTGAACACTGGTTT+TGG 0.242265 3.1:+71077908 MS.gene013823:CDS
TTCTTGATTCCAACCGGTTT+AGG 0.266059 3.1:-71076914 None:intergenic
GGGCGGCTGGGTCTGGATAT+TGG 0.274315 3.1:+71076858 MS.gene013823:CDS
TTTATAGGTATGGCTTCTTA+TGG 0.275721 3.1:+71076770 MS.gene013823:intron
TCAAGGCCGAACCGGGCGGC+TGG 0.280890 3.1:+71076845 MS.gene013823:CDS
CCGAACCGGGCGGCTGGGTC+TGG 0.306529 3.1:+71076851 MS.gene013823:CDS
TCTTGATTCCAACCGGTTTA+GGG 0.332888 3.1:-71076913 None:intergenic
GCAAACTACGGCTGGAATTA+GGG 0.333355 3.1:+71077724 MS.gene013823:CDS
CGGTTCGGCCTTGAACCGTT+TGG 0.337242 3.1:-71076836 None:intergenic
TGCCCTTCTTGTTGTAAATA+CGG 0.356578 3.1:-71077583 None:intergenic
GGAAGCCAAAACCAGTGTTC+AGG 0.356962 3.1:-71077913 None:intergenic
GGTTCGGCCTTGAACCGTTT+GGG 0.375212 3.1:-71076835 None:intergenic
ATCTATATAAATATGATCCT+TGG 0.383433 3.1:+71076583 MS.gene013823:CDS
GTGGCATCCACGTAATTATA+AGG 0.393502 3.1:-71077890 None:intergenic
TCTGGATATTGGAAGGCAAC+CGG 0.400133 3.1:+71076869 MS.gene013823:CDS
CTCGAATCGGTGTGCAGCTT+AGG 0.410548 3.1:-71077779 None:intergenic
CGGTTAACAACACCGTTGCT+TGG 0.420254 3.1:-71077620 None:intergenic
ACCGGTTTAGGGTGACCTAT+TGG 0.422320 3.1:-71076902 None:intergenic
CCAGACCCAGCCGCCCGGTT+CGG 0.426418 3.1:-71076851 None:intergenic
CGTAATTATAAGGAAATTCA+AGG 0.432406 3.1:-71077880 None:intergenic
CCAGCCGTAGTTTGCGGCGG+AGG 0.437220 3.1:-71077716 None:intergenic
CAAACGGTTCAAGGCCGAAC+CGG 0.447727 3.1:+71076837 MS.gene013823:CDS
CTGGATATTGGAAGGCAACC+GGG 0.449962 3.1:+71076870 MS.gene013823:CDS
TTTGTCTTTCAATGCTCAAA+AGG 0.450438 3.1:-71077981 None:intergenic
CAAGGCCGAACCGGGCGGCT+GGG 0.451424 3.1:+71076846 MS.gene013823:CDS
TAGGCTGCGACGTGCATTTG+CGG 0.459621 3.1:-71076533 None:intergenic
AAAGCTTTCTTGATTCCAAC+CGG 0.462419 3.1:-71076920 None:intergenic
GATCATGCACGAGTATCGTT+TGG 0.466085 3.1:+71076988 MS.gene013823:CDS
CTAAAGGTGATAAAACCAAT+TGG 0.468401 3.1:+71076966 MS.gene013823:CDS
ACCTATTGGTTTATCCGCCC+CGG 0.468728 3.1:-71076888 None:intergenic
GTAGTTTGCGGCGGAGGATG+TGG 0.472297 3.1:-71077710 None:intergenic
ACCAATAGGTCACCCTAAAC+CGG 0.472837 3.1:+71076901 MS.gene013823:CDS
CTAATTCCAGCCGTAGTTTG+CGG 0.474275 3.1:-71077722 None:intergenic
TATGGCTTCTTATGGAGAAA+AGG 0.474341 3.1:+71076778 MS.gene013823:CDS
TCTATATAAATATGATCCTT+GGG 0.481892 3.1:+71076584 MS.gene013823:CDS
GTGAGCCTAAGTGGAATGAA+TGG 0.482300 3.1:+71077849 MS.gene013823:CDS
GAAGCCAAAACCAGTGTTCA+GGG 0.483454 3.1:-71077912 None:intergenic
GGTTGGAATCAAGAAAGCTT+TGG 0.483861 3.1:+71076922 MS.gene013823:CDS
GAAAGTACCCAAACGGTTCA+AGG 0.487674 3.1:+71076828 MS.gene013823:CDS
AGGTGCAGAGTGAGCCTAAG+TGG 0.496331 3.1:+71077840 MS.gene013823:CDS
CCTCCGCCGCAAACTACGGC+TGG 0.497456 3.1:+71077716 MS.gene013823:CDS
ATACTCGTGCATGATCCAAT+TGG 0.497532 3.1:-71076981 None:intergenic
TTCTCCCATTCATTCCACTT+AGG 0.500482 3.1:-71077854 None:intergenic
TTGCCGTATTTACAACAAGA+AGG 0.503330 3.1:+71077580 MS.gene013823:CDS
CGAGCTCCTCATCCGTTGGA+TGG 0.515341 3.1:-71076494 None:intergenic
GCACACCGATTCGAGCTGTT+CGG 0.523824 3.1:+71077787 MS.gene013823:CDS
CCTCCACGTGTCACGATCTC+CGG 0.524239 3.1:-71077677 None:intergenic
ATCCGAGCTTCAATTACCAC+CGG 0.527594 3.1:+71076461 MS.gene013823:CDS
ACATCCTCCGCCGCAAACTA+CGG 0.532859 3.1:+71077712 MS.gene013823:CDS
TTCGGAGCACGTGGTATCAC+CGG 0.534411 3.1:+71077805 MS.gene013823:CDS
CAGATTCCATCCAACGGATG+AGG 0.542143 3.1:+71076488 MS.gene013823:CDS
AAACGGTTCAAGGCCGAACC+GGG 0.545704 3.1:+71076838 MS.gene013823:CDS
TGAGCCTAAGTGGAATGAAT+GGG 0.547748 3.1:+71077850 MS.gene013823:CDS
ACCGGGGCGGATAAACCAAT+AGG 0.550145 3.1:+71076887 MS.gene013823:CDS
GCGATGATCGGAACGGCGAT+AGG 0.550339 3.1:-71076552 None:intergenic
TGCACCTCACTTGCAAACTC+CGG 0.557338 3.1:-71077824 None:intergenic
TACGCGGGTAAAGCACCTAA+AGG 0.558141 3.1:+71076950 MS.gene013823:CDS
GAGATCGTGACACGTGGAGG+TGG 0.558979 3.1:+71077680 MS.gene013823:CDS
CTTCTTATGGAGAAAAGGAA+TGG 0.562020 3.1:+71076783 MS.gene013823:CDS
TTTGGGTACTTTCTGTCTCG+TGG 0.562928 3.1:-71076818 None:intergenic
GTGCTCCGAACAGCTCGAAT+CGG 0.563123 3.1:-71077792 None:intergenic
TGCCGTATTTACAACAAGAA+GGG 0.564535 3.1:+71077581 MS.gene013823:CDS
ATCACCGGAGTTTGCAAGTG+AGG 0.564595 3.1:+71077820 MS.gene013823:CDS
AACATTCTGAAATCGAAGAC+AGG 0.566257 3.1:+71077651 MS.gene013823:CDS
GTGGATGCCACCCTGAACAC+TGG 0.570340 3.1:+71077902 MS.gene013823:CDS
GATTTACCTGGGAGGTCCCA+AGG 0.574322 3.1:-71076600 None:intergenic
GCCCGGTGGTAATTGAAGCT+CGG 0.575509 3.1:-71076463 None:intergenic
TGAAATCGAAGACAGGAAGC+CGG 0.575677 3.1:+71077658 MS.gene013823:CDS
ATCACGAGCTCCTCATCCGT+TGG 0.576098 3.1:-71076498 None:intergenic
AATATCCAGACCCAGCCGCC+CGG 0.582754 3.1:-71076856 None:intergenic
TATGATCCTTGGGACCTCCC+AGG 0.585959 3.1:+71076594 MS.gene013823:CDS
AGATCAATTTCAGCGATGAT+CGG 0.587191 3.1:-71076564 None:intergenic
CGAGACAGAAAGTACCCAAA+CGG 0.588955 3.1:+71076821 MS.gene013823:CDS
TACATGAACATATCTTGCAA+TGG 0.597049 3.1:-71077947 None:intergenic
GTTGGATGGAATCTGAAGCC+CGG 0.600613 3.1:-71076480 None:intergenic
TGGATATTGGAAGGCAACCG+GGG 0.604916 3.1:+71076871 MS.gene013823:CDS
ATAGGTCACCCTAAACCGGT+TGG 0.608554 3.1:+71076905 MS.gene013823:CDS
GTTTGCGGCGGAGGATGTGG+CGG 0.614306 3.1:-71077707 None:intergenic
TCCGAGCTTCAATTACCACC+GGG 0.623307 3.1:+71076462 MS.gene013823:CDS
TGAATTTCCTTATAATTACG+TGG 0.635048 3.1:+71077883 MS.gene013823:CDS
AAGCCGGAGATCGTGACACG+TGG 0.637296 3.1:+71077674 MS.gene013823:CDS
TTCGAGCTGTTCGGAGCACG+TGG 0.644987 3.1:+71077796 MS.gene013823:CDS
ATTCCAGCCGTAGTTTGCGG+CGG 0.647744 3.1:-71077719 None:intergenic
GGGCTTCAGATTCCATCCAA+CGG 0.653227 3.1:+71076482 MS.gene013823:CDS
CCGGAGATCGTGACACGTGG+AGG 0.654065 3.1:+71077677 MS.gene013823:CDS
GGCTGGGTCTGGATATTGGA+AGG 0.659634 3.1:+71076862 MS.gene013823:CDS
ATTGAGAAACAACCAAGCAA+CGG 0.677131 3.1:+71077608 MS.gene013823:CDS
AATTTCAGCGATGATCGGAA+CGG 0.679262 3.1:-71076559 None:intergenic
CGGTTCAAGGCCGAACCGGG+CGG 0.700064 3.1:+71076841 MS.gene013823:CDS
ATCCATGTGATTTACCTGGG+AGG 0.702963 3.1:-71076608 None:intergenic
ATATTGGAAGGCAACCGGGG+CGG 0.704098 3.1:+71076874 MS.gene013823:CDS
GGATGGAATCTGAAGCCCGG+TGG 0.713450 3.1:-71076477 None:intergenic
GCCAAAACCAGTGTTCAGGG+TGG 0.722298 3.1:-71077909 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTATTATGTTAAATATT+TGG + chr3.1:71077487-71077506 MS.gene013823:intron 10.0%
!!! TTGATATTATGTTATTTTAT+AGG + chr3.1:71076755-71076774 MS.gene013823:intron 10.0%
!! AAAACATGAAATTGATTAAA+TGG + chr3.1:71077526-71077545 MS.gene013823:intron 15.0%
!! AAATGGAAAATAATAATAAG+TGG - chr3.1:71077394-71077413 None:intergenic 15.0%
!!! ATTATGTTATTTTATAGGTA+TGG + chr3.1:71076760-71076779 MS.gene013823:intron 15.0%
!!! CTTAATTCTAAAAATTAGAA+GGG - chr3.1:71077078-71077097 None:intergenic 15.0%
!!! TCTTAATTCTAAAAATTAGA+AGG - chr3.1:71077079-71077098 None:intergenic 15.0%
!! ATCTATATAAATATGATCCT+TGG + chr3.1:71076583-71076602 MS.gene013823:CDS 20.0%
!! TCTATATAAATATGATCCTT+GGG + chr3.1:71076584-71076603 MS.gene013823:CDS 20.0%
!!! AGTTTGACTTGAATTTTATT+AGG + chr3.1:71077447-71077466 MS.gene013823:intron 20.0%
!!! ATCAATTTCATGTTTTTCTA+AGG - chr3.1:71077522-71077541 None:intergenic 20.0%
! CGTAATTATAAGGAAATTCA+AGG - chr3.1:71077883-71077902 None:intergenic 25.0%
! GGAAAATAATAATAAGTGGT+TGG - chr3.1:71077390-71077409 None:intergenic 25.0%
! TGAATTTCCTTATAATTACG+TGG + chr3.1:71077883-71077902 MS.gene013823:CDS 25.0%
!! GATGTTACTATTCTTCATTT+TGG - chr3.1:71077323-71077342 None:intergenic 25.0%
!! TTTGTTGAAAACTACCATTT+TGG + chr3.1:71077115-71077134 MS.gene013823:intron 25.0%
!!! TTTCAGAATGTTCTGTTTTT+CGG - chr3.1:71077643-71077662 None:intergenic 25.0%
ATTGGTCCAAATTAAAAGAC+AGG - chr3.1:71077152-71077171 None:intergenic 30.0%
ATTTGGACCAATCAATGATT+TGG + chr3.1:71077160-71077179 MS.gene013823:intron 30.0%
CTAAAGGTGATAAAACCAAT+TGG + chr3.1:71076966-71076985 MS.gene013823:CDS 30.0%
CTCTTGATTGATATACTTTG+TGG + chr3.1:71077254-71077273 MS.gene013823:intron 30.0%
GTGATGTGATGTTAATACTT+AGG - chr3.1:71077293-71077312 None:intergenic 30.0%
TACATGAACATATCTTGCAA+TGG - chr3.1:71077950-71077969 None:intergenic 30.0%
TTGGTCCAAATTAAAAGACA+GGG - chr3.1:71077151-71077170 None:intergenic 30.0%
TTTATAGGTATGGCTTCTTA+TGG + chr3.1:71076770-71076789 MS.gene013823:intron 30.0%
! GATTTTACAGTTGGATGATT+GGG + chr3.1:71077553-71077572 MS.gene013823:intron 30.0%
! TGATTTTACAGTTGGATGAT+TGG + chr3.1:71077552-71077571 MS.gene013823:intron 30.0%
!! TATACTTTGTGGCTGATTTT+CGG + chr3.1:71077265-71077284 MS.gene013823:intron 30.0%
!!! AATGGTTCTGATTTTACAGT+TGG + chr3.1:71077544-71077563 MS.gene013823:intron 30.0%
!!! CAATTGGTTTTATCACCTTT+AGG - chr3.1:71076968-71076987 None:intergenic 30.0%
!!! CTTGCAATGGATTAGTATTT+TGG - chr3.1:71077937-71077956 None:intergenic 30.0%
AAAGCTTTCTTGATTCCAAC+CGG - chr3.1:71076923-71076942 None:intergenic 35.0%
AATGATCCATGTGATTTACC+TGG - chr3.1:71076615-71076634 None:intergenic 35.0%
AGATCAATTTCAGCGATGAT+CGG - chr3.1:71076567-71076586 None:intergenic 35.0%
ATGATCCATGTGATTTACCT+GGG - chr3.1:71076614-71076633 None:intergenic 35.0%
ATTGAGAAACAACCAAGCAA+CGG + chr3.1:71077608-71077627 MS.gene013823:CDS 35.0%
CAAGAGTTATCAACTAGTGA+AGG - chr3.1:71077240-71077259 None:intergenic 35.0%
CTTCTTATGGAGAAAAGGAA+TGG + chr3.1:71076783-71076802 MS.gene013823:CDS 35.0%
TATGGCTTCTTATGGAGAAA+AGG + chr3.1:71076778-71076797 MS.gene013823:CDS 35.0%
TATGTGTGATAACTACACCA+AGG + chr3.1:71077212-71077231 MS.gene013823:intron 35.0%
TCGCAAAAAGAACAGCTTAA+GGG + chr3.1:71077030-71077049 MS.gene013823:CDS 35.0%
TGCCGTATTTACAACAAGAA+GGG + chr3.1:71077581-71077600 MS.gene013823:CDS 35.0%
TGGTCCAAATTAAAAGACAG+GGG - chr3.1:71077150-71077169 None:intergenic 35.0%
TTCGCAAAAAGAACAGCTTA+AGG + chr3.1:71077029-71077048 MS.gene013823:CDS 35.0%
TTGCCGTATTTACAACAAGA+AGG + chr3.1:71077580-71077599 MS.gene013823:CDS 35.0%
! TAAGCTGTTCTTTTTGCGAA+TGG - chr3.1:71077029-71077048 None:intergenic 35.0%
! TGCCCTTCTTGTTGTAAATA+CGG - chr3.1:71077586-71077605 None:intergenic 35.0%
!! AACATTCTGAAATCGAAGAC+AGG + chr3.1:71077651-71077670 MS.gene013823:CDS 35.0%
AATTTCAGCGATGATCGGAA+CGG - chr3.1:71076562-71076581 None:intergenic 40.0%
ATACTCGTGCATGATCCAAT+TGG - chr3.1:71076984-71077003 None:intergenic 40.0%
ATCAACTAGTGAAGGTTCCT+TGG - chr3.1:71077232-71077251 None:intergenic 40.0%
GCGTCAACCAAATCATTGAT+TGG - chr3.1:71077170-71077189 None:intergenic 40.0%
GGTTGGAATCAAGAAAGCTT+TGG + chr3.1:71076922-71076941 MS.gene013823:CDS 40.0%
GTGGCATCCACGTAATTATA+AGG - chr3.1:71077893-71077912 None:intergenic 40.0%
TGAGCCTAAGTGGAATGAAT+GGG + chr3.1:71077850-71077869 MS.gene013823:CDS 40.0%
TTCTCCCATTCATTCCACTT+AGG - chr3.1:71077857-71077876 None:intergenic 40.0%
! TCTTGATTCCAACCGGTTTA+GGG - chr3.1:71076916-71076935 None:intergenic 40.0%
! TTCTTGATTCCAACCGGTTT+AGG - chr3.1:71076917-71076936 None:intergenic 40.0%
!! AAAACTACCATTTTGGCCCT+TGG + chr3.1:71077122-71077141 MS.gene013823:intron 40.0%
!! AAACTACCATTTTGGCCCTT+GGG + chr3.1:71077123-71077142 MS.gene013823:intron 40.0%
!! TGATTTGGTTGACGCAAATG+TGG + chr3.1:71077175-71077194 MS.gene013823:intron 40.0%
!!! AAAGCTTTGGTGTTTTACGC+GGG + chr3.1:71076935-71076954 MS.gene013823:CDS 40.0%
!!! GAAAGCTTTGGTGTTTTACG+CGG + chr3.1:71076934-71076953 MS.gene013823:CDS 40.0%
ACCAATAGGTCACCCTAAAC+CGG + chr3.1:71076901-71076920 MS.gene013823:CDS 45.0%
ATCCATGTGATTTACCTGGG+AGG - chr3.1:71076611-71076630 None:intergenic 45.0%
ATCCGAGCTTCAATTACCAC+CGG + chr3.1:71076461-71076480 MS.gene013823:CDS 45.0%
ATTAAAAGACAGGGGACCCA+AGG - chr3.1:71077142-71077161 None:intergenic 45.0%
CTAATTCCAGCCGTAGTTTG+CGG - chr3.1:71077725-71077744 None:intergenic 45.0%
GAAGCCAAAACCAGTGTTCA+GGG - chr3.1:71077915-71077934 None:intergenic 45.0%
GCAAACTACGGCTGGAATTA+GGG + chr3.1:71077724-71077743 MS.gene013823:CDS 45.0%
GTGAGCCTAAGTGGAATGAA+TGG + chr3.1:71077849-71077868 MS.gene013823:CDS 45.0%
TCTGGATATTGGAAGGCAAC+CGG + chr3.1:71076869-71076888 MS.gene013823:CDS 45.0%
TGAAATCGAAGACAGGAAGC+CGG + chr3.1:71077658-71077677 MS.gene013823:CDS 45.0%
TTAAAAGACAGGGGACCCAA+GGG - chr3.1:71077141-71077160 None:intergenic 45.0%
TTTGGGTACTTTCTGTCTCG+TGG - chr3.1:71076821-71076840 None:intergenic 45.0%
! GATCATGCACGAGTATCGTT+TGG + chr3.1:71076988-71077007 MS.gene013823:CDS 45.0%
!! CGAGACAGAAAGTACCCAAA+CGG + chr3.1:71076821-71076840 MS.gene013823:CDS 45.0%
!! GAAAGTACCCAAACGGTTCA+AGG + chr3.1:71076828-71076847 MS.gene013823:CDS 45.0%
!! GGGTCCCCTGTCTTTTAATT+TGG + chr3.1:71077143-71077162 MS.gene013823:intron 45.0%
!! AAATAAATAAATTCTATAAA+TGG - chr3.1:71077411-71077430 None:intergenic 5.0%
ATAGGTCACCCTAAACCGGT+TGG + chr3.1:71076905-71076924 MS.gene013823:CDS 50.0%
ATCACCGGAGTTTGCAAGTG+AGG + chr3.1:71077820-71077839 MS.gene013823:CDS 50.0%
CAGATTCCATCCAACGGATG+AGG + chr3.1:71076488-71076507 MS.gene013823:CDS 50.0%
CGCAAACTACGGCTGGAATT+AGG + chr3.1:71077723-71077742 MS.gene013823:CDS 50.0%
CGGTTAACAACACCGTTGCT+TGG - chr3.1:71077623-71077642 None:intergenic 50.0%
CTGGATATTGGAAGGCAACC+GGG + chr3.1:71076870-71076889 MS.gene013823:CDS 50.0%
GACCTCCCAGGTAAATCACA+TGG + chr3.1:71076606-71076625 MS.gene013823:intron 50.0%
GGAAGCCAAAACCAGTGTTC+AGG - chr3.1:71077916-71077935 None:intergenic 50.0%
GGGCTTCAGATTCCATCCAA+CGG + chr3.1:71076482-71076501 MS.gene013823:CDS 50.0%
TCCGAGCTTCAATTACCACC+GGG + chr3.1:71076462-71076481 MS.gene013823:CDS 50.0%
TGCACCTCACTTGCAAACTC+CGG - chr3.1:71077827-71077846 None:intergenic 50.0%
TGGATATTGGAAGGCAACCG+GGG + chr3.1:71076871-71076890 MS.gene013823:CDS 50.0%
! ACCGGTTTAGGGTGACCTAT+TGG - chr3.1:71076905-71076924 None:intergenic 50.0%
! GTTGGATGGAATCTGAAGCC+CGG - chr3.1:71076483-71076502 None:intergenic 50.0%
! TACGCGGGTAAAGCACCTAA+AGG + chr3.1:71076950-71076969 MS.gene013823:CDS 50.0%
!! ACCTATTGGTTTATCCGCCC+CGG - chr3.1:71076891-71076910 None:intergenic 50.0%
AAACGGTTCAAGGCCGAACC+GGG + chr3.1:71076838-71076857 MS.gene013823:CDS 55.0%
ACATCCTCCGCCGCAAACTA+CGG + chr3.1:71077712-71077731 MS.gene013823:CDS 55.0%
ACCGGGGCGGATAAACCAAT+AGG + chr3.1:71076887-71076906 MS.gene013823:CDS 55.0%
AGGTGCAGAGTGAGCCTAAG+TGG + chr3.1:71077840-71077859 MS.gene013823:CDS 55.0%
ATATTGGAAGGCAACCGGGG+CGG + chr3.1:71076874-71076893 MS.gene013823:CDS 55.0%
ATCACGAGCTCCTCATCCGT+TGG - chr3.1:71076501-71076520 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG + chr3.1:71076837-71076856 MS.gene013823:CDS 55.0%
CTCGAATCGGTGTGCAGCTT+AGG - chr3.1:71077782-71077801 None:intergenic 55.0%
GATTTACCTGGGAGGTCCCA+AGG - chr3.1:71076603-71076622 None:intergenic 55.0%
GCCAAAACCAGTGTTCAGGG+TGG - chr3.1:71077912-71077931 None:intergenic 55.0%
GCCCGGTGGTAATTGAAGCT+CGG - chr3.1:71076466-71076485 None:intergenic 55.0%
GGCTGGGTCTGGATATTGGA+AGG + chr3.1:71076862-71076881 MS.gene013823:CDS 55.0%
GGTTCGGCCTTGAACCGTTT+GGG - chr3.1:71076838-71076857 None:intergenic 55.0%
GTGCTCCGAACAGCTCGAAT+CGG - chr3.1:71077795-71077814 None:intergenic 55.0%
TAGGCTGCGACGTGCATTTG+CGG - chr3.1:71076536-71076555 None:intergenic 55.0%
TATGATCCTTGGGACCTCCC+AGG + chr3.1:71076594-71076613 MS.gene013823:CDS 55.0%
TTCGGAGCACGTGGTATCAC+CGG + chr3.1:71077805-71077824 MS.gene013823:CDS 55.0%
! ATTCCAGCCGTAGTTTGCGG+CGG - chr3.1:71077722-71077741 None:intergenic 55.0%
!! GCACACCGATTCGAGCTGTT+CGG + chr3.1:71077787-71077806 MS.gene013823:CDS 55.0%
!!! GCCACCCTGAACACTGGTTT+TGG + chr3.1:71077908-71077927 MS.gene013823:CDS 55.0%
AAGCCGGAGATCGTGACACG+TGG + chr3.1:71077674-71077693 MS.gene013823:CDS 60.0%
AATATCCAGACCCAGCCGCC+CGG - chr3.1:71076859-71076878 None:intergenic 60.0%
AGGGGACCCAAGGGCCAAAA+TGG - chr3.1:71077132-71077151 None:intergenic 60.0%
CCTCCACGTGTCACGATCTC+CGG - chr3.1:71077680-71077699 None:intergenic 60.0%
CGAGCTCCTCATCCGTTGGA+TGG - chr3.1:71076497-71076516 None:intergenic 60.0%
GAGATCGTGACACGTGGAGG+TGG + chr3.1:71077680-71077699 MS.gene013823:CDS 60.0%
GCGATGATCGGAACGGCGAT+AGG - chr3.1:71076555-71076574 None:intergenic 60.0%
GTGGATGCCACCCTGAACAC+TGG + chr3.1:71077902-71077921 MS.gene013823:CDS 60.0%
TTCGAGCTGTTCGGAGCACG+TGG + chr3.1:71077796-71077815 MS.gene013823:CDS 60.0%
! CGGTTCGGCCTTGAACCGTT+TGG - chr3.1:71076839-71076858 None:intergenic 60.0%
! GGATGGAATCTGAAGCCCGG+TGG - chr3.1:71076480-71076499 None:intergenic 60.0%
! GTAGTTTGCGGCGGAGGATG+TGG - chr3.1:71077713-71077732 None:intergenic 60.0%
CCGGAGATCGTGACACGTGG+AGG + chr3.1:71077677-71077696 MS.gene013823:CDS 65.0%
GGGCGGCTGGGTCTGGATAT+TGG + chr3.1:71076858-71076877 MS.gene013823:CDS 65.0%
GTTTGCGGCGGAGGATGTGG+CGG - chr3.1:71077710-71077729 None:intergenic 65.0%
CCTCCGCCGCAAACTACGGC+TGG + chr3.1:71077716-71077735 MS.gene013823:CDS 70.0%
CGGTTCAAGGCCGAACCGGG+CGG + chr3.1:71076841-71076860 MS.gene013823:CDS 70.0%
! CCAGCCGTAGTTTGCGGCGG+AGG - chr3.1:71077719-71077738 None:intergenic 70.0%
CAAGGCCGAACCGGGCGGCT+GGG + chr3.1:71076846-71076865 MS.gene013823:CDS 75.0%
CCAGACCCAGCCGCCCGGTT+CGG - chr3.1:71076854-71076873 None:intergenic 75.0%
TCAAGGCCGAACCGGGCGGC+TGG + chr3.1:71076845-71076864 MS.gene013823:CDS 75.0%
! CCGAACCGGGCGGCTGGGTC+TGG + chr3.1:71076851-71076870 MS.gene013823:CDS 80.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 71076456 71077988 71076456 ID=MS.gene013823
chr3.1 mRNA 71076456 71077988 71076456 ID=MS.gene013823.t1;Parent=MS.gene013823
chr3.1 exon 71076456 71076615 71076456 ID=MS.gene013823.t1.exon1;Parent=MS.gene013823.t1
chr3.1 CDS 71076456 71076615 71076456 ID=cds.MS.gene013823.t1;Parent=MS.gene013823.t1
chr3.1 exon 71076777 71077051 71076777 ID=MS.gene013823.t1.exon2;Parent=MS.gene013823.t1
chr3.1 CDS 71076777 71077051 71076777 ID=cds.MS.gene013823.t1;Parent=MS.gene013823.t1
chr3.1 exon 71077563 71077988 71077563 ID=MS.gene013823.t1.exon3;Parent=MS.gene013823.t1
chr3.1 CDS 71077563 71077988 71077563 ID=cds.MS.gene013823.t1;Parent=MS.gene013823.t1
Gene Sequence

>MS.gene013823

ATGGCATCCGAGCTTCAATTACCACCGGGCTTCAGATTCCATCCAACGGATGAGGAGCTCGTGATGCACTATCTCTGCCGCAAATGCACGTCGCAGCCTATCGCCGTTCCGATCATCGCTGAAATTGATCTATATAAATATGATCCTTGGGACCTCCCAGGTAAATCACATGGATCATTGTAATTACTTTTTTGTAGCTTGTAAATTTTATTTTGACATATGTACAGTGATATCAAACAAAAGCTTGATCTTTTTGTATAACTATTGTATTTTCAATTAAATATAAAATTTTAATTTTATTGATATTATGTTATTTTATAGGTATGGCTTCTTATGGAGAAAAGGAATGGTACTTTTTCTCGCCACGAGACAGAAAGTACCCAAACGGTTCAAGGCCGAACCGGGCGGCTGGGTCTGGATATTGGAAGGCAACCGGGGCGGATAAACCAATAGGTCACCCTAAACCGGTTGGAATCAAGAAAGCTTTGGTGTTTTACGCGGGTAAAGCACCTAAAGGTGATAAAACCAATTGGATCATGCACGAGTATCGTTTGGCTGATGTAGATCGCACCATTCGCAAAAAGAACAGCTTAAGGGTATAAATAAATATTCGCATTTACCCTTCTAATTTTTAGAATTAAGATCAAAGTTTTGTGATATTTGTTGAAAACTACCATTTTGGCCCTTGGGTCCCCTGTCTTTTAATTTGGACCAATCAATGATTTGGTTGACGCAAATGTGGTTACACTTTTTTATTATGTGTGATAACTACACCAAGGAACCTTCACTAGTTGATAACTCTTGATTGATATACTTTGTGGCTGATTTTCGGTTCCTAAGTATTAACATCACATCACATTATTTCCAAAATGAAGAATAGTAACATCACATTAAATCAGACAATTAATGAGATAATATTGAAAGTCATCTGCCAACCACTTATTATTATTTTCCATTTATAGAATTTATTTATTTCTACTTATCTGTTTGAAGTTTGACTTGAATTTTATTAGGAAATACTAGTATTTAGTCTTTTATTATGTTAAATATTTGGATTTATTTTCCTTAGAAAAACATGAAATTGATTAAATGGTTCTGATTTTACAGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGCACAATTGAGAAACAACCAAGCAACGGTGTTGTTAACCGAAAAACAGAACATTCTGAAATCGAAGACAGGAAGCCGGAGATCGTGACACGTGGAGGTGGTCTTCCGCCACATCCTCCGCCGCAAACTACGGCTGGAATTAGGGATTACATGTACTTTGACACATCAGATTCGATTCCTAAGCTGCACACCGATTCGAGCTGTTCGGAGCACGTGGTATCACCGGAGTTTGCAAGTGAGGTGCAGAGTGAGCCTAAGTGGAATGAATGGGAGAAGAACCTTGAATTTCCTTATAATTACGTGGATGCCACCCTGAACACTGGTTTTGGCTTCCAAAATACTAATCCATTGCAAGATATGTTCATGTACTTGCCCAAAACCTTTTGA
Protein sequence

>MS.gene013823.t1

MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRTIRKKNSLRLDDWVLCRIYNKKGTIEKQPSNGVVNRKTEHSEIEDRKPEIVTRGGGLPPHPPPQTTAGIRDYMYFDTSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKNLEFPYNYVDATLNTGFGFQNTNPLQDMFMYLPKTF