AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013861

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013861.t1 MTR_7g086960 95.628 366 6 2 1 366 1 356 0.0 706
MS.gene013861.t1 MTR_6g027370 49.848 329 130 7 34 362 52 345 6.49e-81 251
MS.gene013861.t1 MTR_4g082040 40.984 366 133 9 64 363 78 426 5.43e-75 238
MS.gene013861.t1 MTR_5g041570 62.130 169 58 1 84 252 127 289 6.68e-71 228
MS.gene013861.t1 MTR_3g089045 42.295 305 129 7 86 366 11 292 3.89e-62 201
MS.gene013861.t1 MTR_6g027360 45.487 277 105 9 86 361 74 305 2.37e-61 199
MS.gene013861.t1 MTR_6g074860 73.214 112 30 0 88 199 1 112 1.44e-60 195
MS.gene013861.t1 MTR_6g027340 57.143 119 51 0 90 208 15 133 4.46e-46 156
MS.gene013861.t1 MTR_4g019370 59.406 101 41 0 91 191 38 138 7.87e-40 144
MS.gene013861.t1 MTR_5g016510 44.138 145 72 2 91 235 5 140 1.34e-37 137
MS.gene013861.t1 MTR_4g094982 55.446 101 45 0 91 191 5 105 5.61e-37 135
MS.gene013861.t1 MTR_3g101290 56.436 101 44 0 91 191 37 137 2.02e-36 132
MS.gene013861.t1 MTR_1g026870 44.444 135 70 2 61 191 52 185 2.38e-32 129
MS.gene013861.t1 MTR_3g110028 42.963 135 72 2 61 191 52 185 3.57e-32 128
MS.gene013861.t1 MTR_6g015455 50.495 101 50 0 91 191 5 105 4.39e-32 128
MS.gene013861.t1 MTR_7g061330 53.465 101 47 0 91 191 113 213 1.38e-31 125
MS.gene013861.t1 MTR_7g461410 53.465 101 47 0 91 191 113 213 1.38e-31 125
MS.gene013861.t1 MTR_7g061330 53.465 101 47 0 91 191 77 177 2.68e-31 124
MS.gene013861.t1 MTR_5g082910 52.632 95 45 0 91 185 19 113 5.41e-31 119
MS.gene013861.t1 MTR_3g463400 52.941 102 48 0 91 192 133 234 1.71e-30 121
MS.gene013861.t1 MTR_5g070020 40.000 175 99 3 86 259 117 286 2.71e-30 119
MS.gene013861.t1 MTR_3g077650 38.636 176 102 4 91 263 181 353 2.27e-29 118
MS.gene013861.t1 MTR_5g049190 49.020 102 52 0 91 192 19 120 3.10e-28 110
MS.gene013861.t1 MTR_7g035350 34.112 214 119 5 94 291 228 435 3.64e-28 114
MS.gene013861.t1 MTR_7g451170 40.278 144 75 2 50 191 157 291 2.82e-27 111
MS.gene013861.t1 MTR_7g037260 49.505 101 51 0 91 191 145 245 3.51e-27 110
MS.gene013861.t1 MTR_4g105660 31.746 189 118 2 28 216 128 305 2.74e-26 109
MS.gene013861.t1 MTR_3g461490 46.078 102 54 1 91 191 14 115 3.19e-26 107
MS.gene013861.t1 MTR_3g052450 44.545 110 60 1 91 199 42 151 4.18e-26 109
MS.gene013861.t1 MTR_5g010650 52.174 92 44 0 94 185 113 204 4.25e-26 109
MS.gene013861.t1 MTR_0008s0390 48.039 102 52 1 91 191 15 116 5.29e-26 105
MS.gene013861.t1 MTR_3g052430 44.545 110 60 1 91 199 43 152 8.89e-26 108
MS.gene013861.t1 MTR_4g088015 48.039 102 52 1 91 192 221 321 1.01e-25 107
MS.gene013861.t1 MTR_2g089420 34.682 173 106 4 91 261 13 180 1.51e-25 107
MS.gene013861.t1 MTR_0008s0470 48.039 102 52 1 91 191 15 116 1.64e-25 104
MS.gene013861.t1 MTR_0251s0050 37.500 144 87 2 91 231 15 158 4.35e-25 103
MS.gene013861.t1 MTR_2g089450 47.059 102 51 2 91 190 14 114 4.54e-25 102
MS.gene013861.t1 MTR_1g100653 43.810 105 58 1 91 194 14 118 5.69e-25 103
MS.gene013861.t1 MTR_1g100667 46.602 103 52 2 91 191 15 116 1.22e-24 102
MS.gene013861.t1 MTR_5g042030 45.098 102 55 1 91 191 9 110 1.99e-24 101
MS.gene013861.t1 MTR_8g060940 48.000 100 51 1 91 189 9 108 2.05e-24 100
MS.gene013861.t1 MTR_8g042410 40.602 133 76 2 68 199 18 148 4.07e-24 103
MS.gene013861.t1 MTR_7g450950 43.103 116 57 1 71 186 146 252 4.26e-24 101
MS.gene013861.t1 MTR_7g037130 48.958 96 49 0 91 186 145 240 4.39e-24 102
MS.gene013861.t1 MTR_2g067420 48.454 97 49 1 91 186 16 112 4.51e-24 101
MS.gene013861.t1 MTR_5g078860 31.818 220 119 5 91 287 9 220 5.21e-24 100
MS.gene013861.t1 MTR_5g079220 44.118 102 56 1 91 191 23 124 5.73e-24 100
MS.gene013861.t1 MTR_7g017260 40.496 121 69 1 74 191 10 130 1.20e-23 99.4
MS.gene013861.t1 MTR_6g055910 42.718 103 56 2 91 191 16 117 1.25e-23 99.4
MS.gene013861.t1 MTR_3g011610 42.727 110 62 1 91 199 39 148 1.42e-23 102
MS.gene013861.t1 MTR_3g074520 43.103 116 58 3 83 191 1 115 1.52e-23 100
MS.gene013861.t1 MTR_4g100720 41.748 103 59 1 90 191 14 116 2.30e-23 95.9
MS.gene013861.t1 MTR_4g091490 46.078 102 54 1 91 191 15 116 2.48e-23 99.8
MS.gene013861.t1 MTR_1g057980 47.872 94 49 0 91 184 80 173 3.24e-23 98.6
MS.gene013861.t1 MTR_0001s0360 43.137 102 57 1 91 191 9 110 3.77e-23 97.4
MS.gene013861.t1 MTR_2g088170 45.238 126 62 3 76 199 20 140 4.91e-23 100
MS.gene013861.t1 MTR_1g085640 39.344 122 73 1 85 205 8 129 5.67e-23 99.4
MS.gene013861.t1 MTR_1g043080 43.137 102 57 1 91 191 14 115 6.17e-23 96.7
MS.gene013861.t1 MTR_5g078800 43.137 102 57 1 91 191 9 110 6.42e-23 97.1
MS.gene013861.t1 MTR_8g017440 42.241 116 59 3 83 191 1 115 6.48e-23 98.6
MS.gene013861.t1 MTR_7g115650 45.098 102 55 1 91 191 14 115 7.67e-23 95.5
MS.gene013861.t1 MTR_7g110830 38.525 122 74 1 85 205 8 129 8.31e-23 98.6
MS.gene013861.t1 MTR_1g076150 44.660 103 54 2 91 191 14 115 9.10e-23 96.3
MS.gene013861.t1 MTR_5g079290 42.157 102 58 1 91 191 19 120 1.12e-22 96.3
MS.gene013861.t1 MTR_0063s0090 37.903 124 69 3 91 212 14 131 1.61e-22 94.7
MS.gene013861.t1 MTR_4g105130 35.938 128 81 1 91 217 14 141 2.02e-22 97.4
MS.gene013861.t1 MTR_3g077110 39.535 129 73 3 91 215 14 141 2.10e-22 97.1
MS.gene013861.t1 MTR_2g011660 44.118 102 56 1 91 191 15 116 2.27e-22 97.1
MS.gene013861.t1 MTR_2g089620 46.078 102 54 1 91 191 14 115 2.38e-22 96.7
MS.gene013861.t1 MTR_4g063100 42.342 111 60 3 87 195 5 113 3.02e-22 94.7
MS.gene013861.t1 MTR_5g078910 42.157 102 58 1 91 191 9 110 3.10e-22 95.9
MS.gene013861.t1 MTR_2g064160 42.718 103 56 2 91 191 13 114 3.26e-22 95.9
MS.gene013861.t1 MTR_6g009430 43.137 102 57 1 91 191 14 115 3.29e-22 96.3
MS.gene013861.t1 MTR_1g085040 38.211 123 73 2 85 205 8 129 3.43e-22 96.7
MS.gene013861.t1 MTR_1g021230 43.636 110 61 1 91 199 59 168 3.70e-22 97.4
MS.gene013861.t1 MTR_1g083630 36.765 136 85 1 91 225 14 149 4.12e-22 98.2
MS.gene013861.t1 MTR_1g112760 38.983 118 69 2 91 206 15 131 8.35e-22 93.2
MS.gene013861.t1 MTR_4g073420 32.934 167 102 4 83 240 1 166 8.39e-22 94.4
MS.gene013861.t1 MTR_5g078950 43.299 97 54 1 91 186 9 105 9.38e-22 93.6
MS.gene013861.t1 MTR_1g110460 31.792 173 102 5 91 248 28 199 9.75e-22 94.7
MS.gene013861.t1 MTR_5g079670 41.748 103 59 1 90 191 12 114 1.11e-21 92.4
MS.gene013861.t1 MTR_8g017540 36.364 143 71 4 68 191 20 161 1.43e-21 95.5
MS.gene013861.t1 MTR_5g010020 42.593 108 56 2 83 184 1 108 1.52e-21 94.7
MS.gene013861.t1 MTR_5g014990 41.071 112 59 3 91 195 14 125 2.10e-21 93.6
MS.gene013861.t1 MTR_4g065017 42.157 102 58 1 91 191 19 120 2.26e-21 94.0
MS.gene013861.t1 MTR_2g099740 43.119 109 54 3 83 184 1 108 2.32e-21 94.7
MS.gene013861.t1 MTR_4g125520 39.130 115 64 2 83 191 1 115 2.44e-21 93.6
MS.gene013861.t1 MTR_2g096380 34.615 156 90 4 91 244 8 153 2.47e-21 92.0
MS.gene013861.t1 MTR_1g062940 37.162 148 80 4 91 230 8 150 2.55e-21 91.3
MS.gene013861.t1 MTR_2g097910 43.689 103 55 2 91 191 22 123 2.55e-21 93.6
MS.gene013861.t1 MTR_5g029840 30.457 197 120 5 83 272 1 187 3.30e-21 93.6
MS.gene013861.t1 MTR_5g062790 44.898 98 52 2 91 186 11 108 4.52e-21 92.8
MS.gene013861.t1 MTR_4g097570 44.898 98 51 2 91 185 14 111 4.54e-21 92.4
MS.gene013861.t1 MTR_5g007370 43.689 103 55 2 91 191 14 115 4.72e-21 92.4
MS.gene013861.t1 MTR_7g010210 38.889 108 65 1 91 197 14 121 4.88e-21 92.8
MS.gene013861.t1 MTR_8g095390 38.261 115 65 2 83 191 1 115 5.34e-21 92.8
MS.gene013861.t1 MTR_7g010210 40.196 102 60 1 91 191 14 115 6.06e-21 91.7
MS.gene013861.t1 MTR_1g017000 42.718 103 57 2 91 191 14 116 6.12e-21 91.3
MS.gene013861.t1 MTR_7g096930 42.157 102 58 1 91 191 14 115 6.49e-21 91.7
MS.gene013861.t1 MTR_0247s0040 45.263 95 51 1 91 184 9 103 6.66e-21 89.4
MS.gene013861.t1 MTR_7g111290 42.718 103 56 2 85 185 8 109 6.69e-21 93.2
MS.gene013861.t1 MTR_4g082230 40.000 115 63 2 83 191 1 115 6.99e-21 93.6
MS.gene013861.t1 MTR_8g098860 40.566 106 62 1 91 195 14 119 8.06e-21 92.0
MS.gene013861.t1 MTR_3g103570 38.655 119 67 3 91 203 14 132 1.07e-20 92.4
MS.gene013861.t1 MTR_4g057635 43.269 104 55 3 91 191 14 116 1.16e-20 91.7
MS.gene013861.t1 MTR_8g017390 41.026 117 60 4 83 191 1 116 1.18e-20 93.2
MS.gene013861.t1 MTR_8g006470 45.714 105 55 2 91 193 12 116 1.56e-20 90.9
MS.gene013861.t1 MTR_8g017500 42.718 103 56 2 91 191 14 115 1.70e-20 91.7
MS.gene013861.t1 MTR_0008s0280 41.237 97 54 2 91 185 14 109 1.76e-20 89.4
MS.gene013861.t1 MTR_1g043050 41.176 102 59 1 91 191 14 115 1.80e-20 90.1
MS.gene013861.t1 MTR_0197s0010 43.000 100 54 2 94 191 6 104 2.08e-20 89.4
MS.gene013861.t1 MTR_7g117730 36.134 119 70 2 83 195 1 119 2.11e-20 89.7
MS.gene013861.t1 MTR_1g073170 41.905 105 58 2 91 193 22 125 2.32e-20 89.7
MS.gene013861.t1 MTR_3g097450 32.759 174 89 6 83 248 1 154 2.34e-20 90.5
MS.gene013861.t1 MTR_8g027345 36.220 127 73 3 76 198 3 125 2.52e-20 90.5
MS.gene013861.t1 MTR_8g020490 37.500 112 69 1 87 197 6 117 2.58e-20 89.4
MS.gene013861.t1 MTR_3g028740 42.727 110 61 2 83 191 17 125 2.63e-20 91.3
MS.gene013861.t1 MTR_3g083540 37.069 116 72 1 91 205 43 158 2.93e-20 90.5
MS.gene013861.t1 MTR_4g082290 41.026 117 64 2 76 191 3 115 3.37e-20 91.7
MS.gene013861.t1 MTR_4g478180 41.748 103 57 2 91 191 15 116 3.54e-20 90.9
MS.gene013861.t1 MTR_4g097570 44.330 97 52 2 91 185 14 110 3.57e-20 89.7
MS.gene013861.t1 MTR_8g017340 43.810 105 55 3 90 191 13 116 4.61e-20 91.7
MS.gene013861.t1 MTR_1g017140 40.777 103 59 2 91 191 14 116 4.88e-20 90.1
MS.gene013861.t1 MTR_1g086530 39.640 111 63 3 91 198 35 144 5.16e-20 89.4
MS.gene013861.t1 MTR_6g012180 41.237 97 56 1 91 186 14 110 5.17e-20 89.7
MS.gene013861.t1 MTR_6g055910 48.529 68 35 0 124 191 21 88 5.27e-20 88.6
MS.gene013861.t1 MTR_2g095520 44.898 98 52 2 91 186 14 111 5.41e-20 89.7
MS.gene013861.t1 MTR_6g012690 41.026 117 64 2 76 191 3 115 5.43e-20 90.5
MS.gene013861.t1 MTR_7g102110 39.655 116 63 3 83 191 1 116 6.00e-20 89.0
MS.gene013861.t1 MTR_5g079120 37.302 126 65 2 91 215 63 175 6.19e-20 89.4
MS.gene013861.t1 MTR_4g485530 42.268 97 53 2 90 184 13 108 6.73e-20 87.0
MS.gene013861.t1 MTR_5g078930 44.681 94 51 1 94 186 14 107 7.69e-20 87.4
MS.gene013861.t1 MTR_5g088080 41.905 105 56 3 91 193 14 115 8.72e-20 88.2
MS.gene013861.t1 MTR_5g088150 41.905 105 56 3 91 193 14 115 8.72e-20 88.2
MS.gene013861.t1 MTR_5g488210 41.905 105 56 3 91 193 14 115 8.72e-20 88.2
MS.gene013861.t1 MTR_5g088610 39.091 110 63 3 91 198 11 118 9.20e-20 89.7
MS.gene013861.t1 MTR_7g035075 26.738 187 122 2 91 276 16 188 9.31e-20 87.0
MS.gene013861.t1 MTR_7g087130 40.541 111 61 2 82 191 9 115 9.37e-20 89.4
MS.gene013861.t1 MTR_5g088640 42.857 98 54 2 91 186 14 111 1.05e-19 88.2
MS.gene013861.t1 MTR_5g488170 42.857 98 54 2 91 186 14 111 1.32e-19 87.4
MS.gene013861.t1 MTR_4g029540 44.643 112 57 3 84 193 8 116 1.97e-19 87.8
MS.gene013861.t1 MTR_0140s0030 39.216 102 61 1 91 191 15 116 1.98e-19 88.6
MS.gene013861.t1 MTR_0489s0020 39.216 102 61 1 91 191 15 116 1.98e-19 88.6
MS.gene013861.t1 MTR_7g011170 40.678 118 63 3 76 191 3 115 2.25e-19 87.8
MS.gene013861.t1 MTR_0193s0090 30.636 173 112 3 91 255 9 181 2.45e-19 85.9
MS.gene013861.t1 MTR_3g039990 39.216 102 61 1 91 191 15 116 2.57e-19 87.8
MS.gene013861.t1 MTR_8g017350 40.171 117 61 4 83 191 1 116 3.79e-19 89.4
MS.gene013861.t1 MTR_1g045610 43.000 100 54 2 87 184 19 117 5.81e-19 85.9
MS.gene013861.t1 MTR_7g061550 38.393 112 66 1 86 194 2 113 1.27e-18 86.3
MS.gene013861.t1 MTR_4g128670 42.857 98 54 2 91 186 14 111 1.38e-18 86.3
MS.gene013861.t1 MTR_5g078140 32.335 167 98 4 82 238 9 170 1.66e-18 85.5
MS.gene013861.t1 MTR_6g090405 41.346 104 59 2 91 192 14 117 4.30e-18 83.2
MS.gene013861.t1 MTR_2g034790 38.235 102 62 1 91 191 14 115 4.91e-18 84.3
MS.gene013861.t1 MTR_3g065440 41.071 112 59 3 82 191 9 115 6.14e-18 84.0
MS.gene013861.t1 MTR_1g086510 37.273 110 67 2 91 198 23 132 7.18e-18 82.8
MS.gene013861.t1 MTR_2g033170 39.091 110 65 2 91 198 26 135 7.98e-18 84.0
MS.gene013861.t1 MTR_4g121460 37.255 102 63 1 91 191 14 115 1.06e-17 83.6
MS.gene013861.t1 MTR_7g076740 36.975 119 71 3 91 206 14 131 1.07e-17 83.2
MS.gene013861.t1 MTR_4g102380 39.806 103 59 2 91 191 14 115 1.30e-17 82.4
MS.gene013861.t1 MTR_3g045430 40.777 103 58 3 91 191 15 116 1.60e-17 82.4
MS.gene013861.t1 MTR_6g006030 41.053 95 55 1 91 184 16 110 1.81e-17 80.5
MS.gene013861.t1 MTR_8g031360 41.346 104 57 3 91 191 15 117 2.20e-17 82.0
MS.gene013861.t1 MTR_5g038910 31.250 144 77 2 94 228 29 159 2.87e-17 83.2
MS.gene013861.t1 MTR_5g038910 31.250 144 77 2 94 228 29 159 4.15e-17 82.4
MS.gene013861.t1 MTR_8g468380 35.714 98 63 0 94 191 25 122 8.15e-17 81.6
MS.gene013861.t1 MTR_4g063100 48.611 72 36 1 124 195 14 84 8.87e-17 79.0
MS.gene013861.t1 MTR_4g123040 38.182 110 66 2 91 198 26 135 1.37e-16 80.1
MS.gene013861.t1 MTR_7g111290 51.613 62 30 0 124 185 6 67 3.26e-16 79.3
MS.gene013861.t1 MTR_2g096380 34.711 121 70 2 124 244 23 134 3.43e-16 77.0
MS.gene013861.t1 MTR_1g008970 47.692 65 34 0 117 181 117 181 1.71e-14 72.8
MS.gene013861.t1 MTR_6g080360 36.957 92 57 1 93 184 481 571 3.08e-14 74.7
MS.gene013861.t1 MTR_6g080360 37.363 91 56 1 94 184 262 351 4.53e-14 73.9
MS.gene013861.t1 MTR_7g109320 38.739 111 63 2 82 191 9 115 4.89e-14 72.8
MS.gene013861.t1 MTR_4g128190 41.237 97 44 4 91 186 13 97 7.78e-14 70.9
MS.gene013861.t1 MTR_5g007300 42.667 75 42 1 91 164 66 140 2.24e-12 64.3
MS.gene013861.t1 MTR_0023s0210 42.667 75 42 1 91 164 9 83 2.48e-12 62.4
MS.gene013861.t1 MTR_1g085880 39.048 105 61 3 94 196 17 120 3.29e-12 65.1
MS.gene013861.t1 MTR_1g085770 39.048 105 61 3 94 196 17 120 6.50e-12 66.2
MS.gene013861.t1 MTR_7g115550 40.000 85 50 1 92 176 8 91 1.07e-11 67.0
MS.gene013861.t1 MTR_7g115550 35.052 97 62 1 92 188 8 103 1.20e-11 66.6
MS.gene013861.t1 MTR_6g055910 45.652 46 25 0 146 191 2 47 9.18e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013861.t1 AT5G17800 43.158 285 105 5 86 363 88 322 1.70e-72 229
MS.gene013861.t1 AT1G69560 46.570 277 94 9 90 364 106 330 5.19e-69 220
MS.gene013861.t1 AT1G69560 46.570 277 94 9 90 364 122 346 8.06e-69 220
MS.gene013861.t1 AT1G26780 77.586 116 26 0 88 203 95 210 3.25e-66 211
MS.gene013861.t1 AT1G26780 56.757 185 77 2 88 269 95 279 6.55e-66 213
MS.gene013861.t1 AT1G17950 75.926 108 26 0 88 195 2 109 9.27e-61 196
MS.gene013861.t1 AT3G29020 71.795 117 33 0 86 202 60 176 1.18e-60 195
MS.gene013861.t1 AT3G29020 71.795 117 33 0 86 202 62 178 6.19e-60 196
MS.gene013861.t1 AT4G33450 76.415 106 25 0 89 194 17 122 2.94e-58 189
MS.gene013861.t1 AT1G73410 42.960 277 116 8 88 362 3 239 6.07e-58 188
MS.gene013861.t1 AT1G73410 79.439 107 22 0 88 194 3 109 6.80e-57 184
MS.gene013861.t1 AT5G39700 64.423 104 37 0 92 195 57 160 4.34e-43 148
MS.gene013861.t1 AT4G37260 42.500 160 77 3 91 248 13 159 1.28e-37 138
MS.gene013861.t1 AT5G67300 53.571 112 48 1 91 202 6 113 1.39e-37 137
MS.gene013861.t1 AT3G55730 54.808 104 47 0 91 194 56 159 2.89e-36 136
MS.gene013861.t1 AT2G39880 53.043 115 52 1 84 198 45 157 5.52e-36 134
MS.gene013861.t1 AT2G23290 53.465 101 47 0 91 191 13 113 3.52e-35 131
MS.gene013861.t1 AT3G50060 53.465 101 47 0 91 191 6 106 7.91e-35 130
MS.gene013861.t1 AT3G09230 37.915 211 122 4 91 299 55 258 1.12e-34 131
MS.gene013861.t1 AT3G09370 52.475 101 48 0 91 191 130 230 1.68e-31 124
MS.gene013861.t1 AT3G09370 52.475 101 48 0 91 191 135 235 1.74e-31 124
MS.gene013861.t1 AT3G09370 52.475 101 48 0 91 191 143 243 2.54e-31 124
MS.gene013861.t1 AT5G02320 52.475 101 48 0 91 191 127 227 3.91e-31 124
MS.gene013861.t1 AT5G02320 52.475 101 48 0 91 191 127 227 3.91e-31 124
MS.gene013861.t1 AT5G02320 52.475 101 48 0 91 191 67 167 4.57e-31 123
MS.gene013861.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.22e-30 123
MS.gene013861.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.22e-30 123
MS.gene013861.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.22e-30 123
MS.gene013861.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.22e-30 123
MS.gene013861.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.49e-30 122
MS.gene013861.t1 AT5G11510 40.000 135 76 2 61 191 48 181 9.29e-30 121
MS.gene013861.t1 AT5G11510 40.000 135 76 2 61 191 48 181 9.29e-30 121
MS.gene013861.t1 AT5G11510 40.000 135 76 2 61 191 48 181 9.29e-30 121
MS.gene013861.t1 AT5G11510 40.000 135 76 2 61 191 48 181 1.03e-29 120
MS.gene013861.t1 AT5G11510 39.706 136 77 2 60 191 47 181 1.07e-29 120
MS.gene013861.t1 AT5G58850 50.000 112 56 0 80 191 94 205 1.14e-29 118
MS.gene013861.t1 AT5G11050 34.975 203 94 5 91 291 105 271 2.14e-29 117
MS.gene013861.t1 AT5G40360 31.200 250 155 4 46 292 110 345 3.05e-29 116
MS.gene013861.t1 AT3G27785 50.000 102 51 0 91 192 189 290 2.18e-27 112
MS.gene013861.t1 AT2G25230 49.495 99 48 2 93 190 28 125 4.84e-27 107
MS.gene013861.t1 AT4G18770 42.857 126 72 0 91 216 217 342 4.85e-27 111
MS.gene013861.t1 AT3G11440 42.735 117 66 1 84 199 36 152 2.55e-26 109
MS.gene013861.t1 AT3G11440 42.735 117 66 1 84 199 36 152 3.46e-26 110
MS.gene013861.t1 AT3G11440 42.735 117 66 1 84 199 36 152 3.46e-26 110
MS.gene013861.t1 AT3G11440 42.735 117 66 1 84 199 36 152 3.46e-26 110
MS.gene013861.t1 AT3G48920 41.463 123 69 2 91 210 20 142 8.24e-26 104
MS.gene013861.t1 AT1G79180 46.602 103 52 2 91 191 16 117 4.89e-25 103
MS.gene013861.t1 AT2G32460 45.045 111 58 2 91 199 20 129 5.77e-25 106
MS.gene013861.t1 AT2G32460 45.045 111 58 2 91 199 8 117 6.34e-25 105
MS.gene013861.t1 AT5G40430 36.774 155 82 3 46 190 4 152 7.83e-25 102
MS.gene013861.t1 AT4G28110 43.478 115 59 2 83 191 1 115 8.78e-25 102
MS.gene013861.t1 AT5G40330 43.137 102 57 1 91 191 14 115 8.87e-25 100
MS.gene013861.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.49e-24 104
MS.gene013861.t1 AT4G25560 43.363 113 61 2 81 191 2 113 1.53e-24 102
MS.gene013861.t1 AT2G26950 34.524 168 96 4 83 243 10 170 1.58e-24 103
MS.gene013861.t1 AT4G26930 43.636 110 61 1 91 199 21 130 1.61e-24 103
MS.gene013861.t1 AT3G27920 44.118 102 56 1 91 191 16 117 1.81e-24 100
MS.gene013861.t1 AT5G14750 43.137 102 57 1 91 191 18 119 1.88e-24 99.8
MS.gene013861.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.90e-24 104
MS.gene013861.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.90e-24 104
MS.gene013861.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.90e-24 104
MS.gene013861.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.90e-24 104
MS.gene013861.t1 AT3G23250 33.333 186 103 6 91 269 14 185 3.36e-24 100
MS.gene013861.t1 AT3G12720 45.631 103 53 2 91 191 24 125 4.24e-24 101
MS.gene013861.t1 AT1G63910 39.695 131 73 2 83 207 1 131 4.35e-24 102
MS.gene013861.t1 AT1G18570 44.118 102 56 1 91 191 15 116 5.54e-24 101
MS.gene013861.t1 AT5G56110 46.078 102 54 1 91 191 14 115 9.31e-24 100
MS.gene013861.t1 AT3G13890 33.684 190 117 5 83 263 1 190 1.67e-23 100
MS.gene013861.t1 AT5G61420 39.007 141 84 2 91 229 14 154 2.41e-23 100
MS.gene013861.t1 AT3G28470 49.474 95 47 1 91 184 14 108 3.08e-23 99.0
MS.gene013861.t1 AT1G56160 44.660 103 54 2 91 191 16 117 3.11e-23 98.6
MS.gene013861.t1 AT5G10280 36.932 176 101 5 91 262 14 183 3.34e-23 99.4
MS.gene013861.t1 AT2G31180 44.118 102 56 1 91 191 14 115 3.76e-23 97.4
MS.gene013861.t1 AT4G05100 42.241 116 60 2 83 191 1 116 4.43e-23 98.6
MS.gene013861.t1 AT5G54230 32.584 178 106 3 91 267 14 178 5.93e-23 98.2
MS.gene013861.t1 AT1G74080 40.496 121 66 2 91 210 14 129 6.02e-23 98.6
MS.gene013861.t1 AT5G07700 37.736 159 91 3 91 242 14 171 6.02e-23 98.6
MS.gene013861.t1 AT5G07700 37.736 159 91 3 91 242 14 171 6.02e-23 98.6
MS.gene013861.t1 AT1G09540 38.462 143 84 3 85 224 8 149 7.72e-23 98.6
MS.gene013861.t1 AT5G65230 45.631 103 53 2 91 191 14 115 7.76e-23 97.8
MS.gene013861.t1 AT2G26960 43.243 111 62 1 90 199 21 131 1.16e-22 99.0
MS.gene013861.t1 AT3G13890 32.663 199 116 6 83 263 1 199 1.31e-22 98.2
MS.gene013861.t1 AT5G60890 39.655 116 69 1 91 205 14 129 1.34e-22 96.7
MS.gene013861.t1 AT3G12820 44.660 103 54 2 91 191 16 117 1.42e-22 95.5
MS.gene013861.t1 AT5G62470 41.584 101 59 0 91 191 14 114 1.44e-22 97.8
MS.gene013861.t1 AT1G74430 37.600 125 77 1 91 214 14 138 1.80e-22 95.9
MS.gene013861.t1 AT4G00540 46.154 104 53 1 91 191 103 206 1.83e-22 98.2
MS.gene013861.t1 AT1G16490 44.660 103 54 2 91 191 16 117 1.86e-22 95.9
MS.gene013861.t1 AT5G52600 44.118 102 56 1 91 191 14 115 1.89e-22 94.4
MS.gene013861.t1 AT3G30210 40.000 125 69 2 89 212 27 146 2.35e-22 95.9
MS.gene013861.t1 AT4G17785 42.735 117 58 3 83 191 1 116 3.48e-22 96.7
MS.gene013861.t1 AT4G17785 42.735 117 58 3 83 191 1 116 3.57e-22 96.7
MS.gene013861.t1 AT4G00540 46.154 104 53 1 91 191 101 204 3.73e-22 97.4
MS.gene013861.t1 AT5G52260 48.544 103 50 2 91 191 14 115 4.06e-22 94.7
MS.gene013861.t1 AT5G55020 41.818 110 63 1 91 199 28 137 4.84e-22 97.8
MS.gene013861.t1 AT5G26660 34.615 156 95 3 91 240 14 168 7.24e-22 95.9
MS.gene013861.t1 AT4G38620 35.252 139 84 2 83 215 1 139 8.28e-22 94.4
MS.gene013861.t1 AT3G47600 42.157 102 58 1 91 191 14 115 8.58e-22 95.1
MS.gene013861.t1 AT1G57560 34.104 173 109 3 85 253 8 179 8.78e-22 94.0
MS.gene013861.t1 AT5G07690 39.516 124 69 2 91 213 14 132 1.50e-21 94.7
MS.gene013861.t1 AT5G57620 43.689 103 56 2 91 191 14 116 1.56e-21 94.4
MS.gene013861.t1 AT1G35515 36.522 115 67 2 83 191 1 115 1.81e-21 91.7
MS.gene013861.t1 AT4G01680 39.091 110 66 1 85 193 8 117 1.84e-21 92.4
MS.gene013861.t1 AT3G53200 42.056 107 59 2 91 195 11 116 1.92e-21 92.4
MS.gene013861.t1 AT3G02940 39.130 115 64 2 83 191 1 115 2.28e-21 93.6
MS.gene013861.t1 AT1G22640 39.655 116 62 3 83 191 1 115 2.37e-21 92.4
MS.gene013861.t1 AT4G21440 43.137 102 57 1 91 191 14 115 2.46e-21 94.4
MS.gene013861.t1 AT1G79180 37.037 135 51 2 91 191 16 150 2.70e-21 93.6
MS.gene013861.t1 AT5G16770 39.130 115 64 2 83 191 1 115 2.76e-21 93.6
MS.gene013861.t1 AT5G16770 39.130 115 64 2 83 191 1 115 2.76e-21 93.6
MS.gene013861.t1 AT5G23000 43.269 104 55 2 91 191 14 116 2.80e-21 93.6
MS.gene013861.t1 AT3G02940 39.130 115 64 2 83 191 1 115 3.24e-21 93.6
MS.gene013861.t1 AT3G02940 39.130 115 64 2 83 191 1 115 3.24e-21 93.6
MS.gene013861.t1 AT5G16770 39.130 115 64 2 83 191 1 115 3.76e-21 93.6
MS.gene013861.t1 AT5G16770 39.130 115 64 2 83 191 1 115 3.76e-21 93.6
MS.gene013861.t1 AT1G34670 40.000 115 63 2 83 191 1 115 3.79e-21 94.0
MS.gene013861.t1 AT5G35550 40.777 103 60 1 90 191 15 117 3.82e-21 92.0
MS.gene013861.t1 AT5G62470 41.176 102 59 1 91 191 14 115 4.14e-21 93.6
MS.gene013861.t1 AT4G01680 39.091 110 66 1 85 193 8 117 4.71e-21 93.2
MS.gene013861.t1 AT4G09460 31.609 174 103 3 83 240 1 174 5.32e-21 90.9
MS.gene013861.t1 AT1G06180 41.026 117 61 4 82 195 9 120 6.46e-21 90.9
MS.gene013861.t1 AT1G66370 37.963 108 66 1 91 197 10 117 6.72e-21 90.9
MS.gene013861.t1 AT5G15310 37.415 147 83 3 83 223 1 144 6.89e-21 92.4
MS.gene013861.t1 AT5G15310 37.415 147 83 3 83 223 1 144 7.81e-21 92.0
MS.gene013861.t1 AT3G49690 43.689 103 56 2 91 191 14 116 1.03e-20 91.7
MS.gene013861.t1 AT5G12870 37.391 115 71 1 78 191 7 121 1.22e-20 90.9
MS.gene013861.t1 AT3G01140 39.130 115 64 2 83 191 1 115 1.31e-20 92.0
MS.gene013861.t1 AT3G46130 41.121 107 60 2 91 195 11 116 1.49e-20 90.5
MS.gene013861.t1 AT5G15310 30.603 232 138 7 83 296 1 227 1.66e-20 90.1
MS.gene013861.t1 AT1G57560 35.172 145 89 3 85 227 8 149 1.67e-20 91.3
MS.gene013861.t1 AT5G59780 40.187 107 61 2 91 195 10 115 1.68e-20 89.7
MS.gene013861.t1 AT5G14750 48.529 68 35 0 124 191 18 85 2.03e-20 87.8
MS.gene013861.t1 AT5G14340 40.000 105 60 2 91 193 26 129 2.06e-20 90.1
MS.gene013861.t1 AT3G01140 41.176 102 59 1 91 191 57 158 2.09e-20 92.0
MS.gene013861.t1 AT3G60460 45.714 105 55 2 91 193 13 117 2.54e-20 90.5
MS.gene013861.t1 AT1G18710 40.196 102 60 1 91 191 14 115 2.75e-20 89.7
MS.gene013861.t1 AT5G65790 34.752 141 86 3 91 225 14 154 3.63e-20 91.3
MS.gene013861.t1 AT2G47190 40.000 110 64 2 91 198 22 131 4.10e-20 89.4
MS.gene013861.t1 AT3G08500 42.157 102 58 1 91 191 32 133 4.31e-20 90.5
MS.gene013861.t1 AT1G25340 38.462 104 60 1 91 194 20 119 6.46e-20 89.0
MS.gene013861.t1 AT1G66380 37.600 125 77 1 84 207 3 127 7.08e-20 85.5
MS.gene013861.t1 AT4G01680 37.705 122 63 2 85 193 8 129 7.45e-20 90.1
MS.gene013861.t1 AT1G25340 38.462 104 60 1 91 194 20 119 7.95e-20 89.4
MS.gene013861.t1 AT1G25340 38.095 105 64 1 91 194 20 124 8.59e-20 88.6
MS.gene013861.t1 AT3G28910 40.196 102 60 1 91 191 14 115 1.04e-19 89.4
MS.gene013861.t1 AT2G16720 37.069 116 65 3 83 191 1 115 1.08e-19 88.2
MS.gene013861.t1 AT3G61250 37.594 133 76 3 82 212 9 136 1.20e-19 88.6
MS.gene013861.t1 AT4G34990 37.391 115 66 2 83 191 1 115 1.22e-19 88.2
MS.gene013861.t1 AT3G13540 31.481 162 101 3 91 242 25 186 1.31e-19 87.4
MS.gene013861.t1 AT1G68320 39.623 106 61 2 91 194 21 125 1.72e-19 87.8
MS.gene013861.t1 AT1G66230 33.939 165 100 5 82 242 9 168 2.26e-19 87.4
MS.gene013861.t1 AT5G16600 37.594 133 76 3 82 212 9 136 2.38e-19 88.2
MS.gene013861.t1 AT1G56650 35.484 124 79 1 84 206 3 126 2.67e-19 86.7
MS.gene013861.t1 AT5G49620 36.232 138 82 3 63 198 4 137 3.04e-19 87.4
MS.gene013861.t1 AT1G74650 38.235 102 62 1 91 191 14 115 3.67e-19 87.8
MS.gene013861.t1 AT2G02820 33.884 121 80 0 94 214 33 153 4.80e-19 88.6
MS.gene013861.t1 AT2G02820 33.884 121 80 0 94 214 33 153 5.17e-19 87.4
MS.gene013861.t1 AT2G02820 33.884 121 80 0 94 214 33 153 6.19e-19 88.6
MS.gene013861.t1 AT1G08810 34.014 147 94 2 91 234 14 160 7.30e-19 85.9
MS.gene013861.t1 AT3G12820 51.471 68 33 0 124 191 2 69 9.00e-19 84.0
MS.gene013861.t1 AT2G36890 42.308 104 56 3 91 191 14 116 9.18e-19 85.9
MS.gene013861.t1 AT2G36890 42.308 104 56 3 91 191 55 157 9.38e-19 86.7
MS.gene013861.t1 AT4G13480 43.000 100 54 2 87 184 4 102 1.03e-18 85.1
MS.gene013861.t1 AT3G24310 44.792 96 50 2 91 184 20 114 1.05e-18 85.5
MS.gene013861.t1 AT3G53200 48.611 72 37 0 124 195 12 83 1.45e-18 83.6
MS.gene013861.t1 AT1G48000 43.158 95 53 1 91 184 34 128 1.58e-18 84.3
MS.gene013861.t1 AT5G35550 46.154 78 40 1 116 191 43 120 2.23e-18 84.3
MS.gene013861.t1 AT5G40350 41.053 95 55 1 91 184 19 113 3.35e-18 82.8
MS.gene013861.t1 AT4G12350 38.679 106 62 2 88 191 11 115 3.98e-18 84.0
MS.gene013861.t1 AT3G27810 41.053 95 55 1 91 184 22 116 5.96e-18 82.4
MS.gene013861.t1 AT3G01530 40.196 102 58 2 91 190 27 127 9.85e-18 81.3
MS.gene013861.t1 AT2G47460 35.556 135 77 3 91 224 14 139 1.24e-17 83.6
MS.gene013861.t1 AT4G22680 40.777 103 58 2 91 191 14 115 1.24e-17 82.4
MS.gene013861.t1 AT5G26660 35.537 121 74 1 124 240 17 137 1.35e-17 83.2
MS.gene013861.t1 AT1G14350 34.951 103 67 0 94 196 28 130 1.39e-17 84.0
MS.gene013861.t1 AT1G14350 34.951 103 67 0 94 196 28 130 1.39e-17 84.0
MS.gene013861.t1 AT3G06490 39.091 110 65 2 91 198 21 130 1.55e-17 82.8
MS.gene013861.t1 AT4G37780 37.864 103 62 2 91 191 14 116 1.85e-17 82.4
MS.gene013861.t1 AT5G49330 37.864 103 61 2 91 191 14 115 3.51e-17 82.0
MS.gene013861.t1 AT5G59780 45.833 72 39 0 124 195 23 94 4.45e-17 79.7
MS.gene013861.t1 AT2G37630 33.571 140 83 2 91 220 4 143 5.70e-17 81.6
MS.gene013861.t1 AT3G46130 43.210 81 44 1 117 195 4 84 6.25e-17 79.3
MS.gene013861.t1 AT1G66390 40.000 110 65 1 84 192 3 112 6.89e-17 79.7
MS.gene013861.t1 AT3G46130 45.833 72 39 0 124 195 23 94 8.30e-17 79.3
MS.gene013861.t1 AT3G62610 35.043 117 71 2 76 191 3 115 1.62e-16 80.1
MS.gene013861.t1 AT3G18100 38.298 94 58 0 91 184 546 639 2.78e-16 80.9
MS.gene013861.t1 AT3G18100 33.684 95 61 2 91 184 495 588 7.24e-11 64.3
MS.gene013861.t1 AT3G18100 38.298 94 58 0 91 184 498 591 3.08e-16 80.9
MS.gene013861.t1 AT3G18100 33.684 95 61 2 91 184 447 540 7.75e-11 64.3
MS.gene013861.t1 AT3G18100 38.298 94 58 0 91 184 385 478 4.53e-16 80.1
MS.gene013861.t1 AT3G18100 38.298 94 58 0 91 184 333 426 5.09e-16 80.1
MS.gene013861.t1 AT5G49620 32.895 152 82 4 63 198 4 151 7.04e-16 78.2
MS.gene013861.t1 AT5G40350 47.541 61 32 0 124 184 8 68 1.33e-15 74.3
MS.gene013861.t1 AT3G27810 47.541 61 32 0 124 184 7 67 2.85e-15 73.6
MS.gene013861.t1 AT1G66380 45.570 79 43 0 124 202 11 89 3.45e-15 71.2
MS.gene013861.t1 AT5G62320 38.182 110 58 3 91 191 15 123 4.27e-15 74.7
MS.gene013861.t1 AT3G47600 45.588 68 37 0 124 191 42 109 8.87e-15 74.7
MS.gene013861.t1 AT1G71030 41.538 65 38 0 127 191 5 69 1.26e-13 68.9
MS.gene013861.t1 AT1G71030 41.538 65 38 0 127 191 19 83 1.62e-13 68.9
MS.gene013861.t1 AT5G14750 41.379 58 34 0 134 191 1 58 5.94e-13 66.2
MS.gene013861.t1 AT5G14750 41.379 58 34 0 134 191 1 58 5.94e-13 66.2
MS.gene013861.t1 AT3G23250 39.437 71 39 1 134 204 1 67 2.84e-12 66.2
MS.gene013861.t1 AT1G22640 43.103 58 33 0 134 191 1 58 8.70e-12 64.3
MS.gene013861.t1 AT1G09770 40.000 85 50 1 92 176 8 91 1.87e-11 66.2

Find 61 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATATGGTCCTCAAAAT+TGG 0.247103 7.1:+18573504 MS.gene013861:CDS
AGGTCCAATATCTCAATTTC+TGG 0.252170 7.1:+18574819 MS.gene013861:CDS
TTCACCAGAAATTGAGATAT+TGG 0.257304 7.1:-18574823 None:intergenic
AAGGAGCTTGTTGCTGAATA+TGG 0.317262 7.1:+18573491 MS.gene013861:CDS
TCAAGGCTATGGATCACTAA+TGG 0.326250 7.1:+18574325 MS.gene013861:CDS
GAAAGACTTTCAACAACAAC+TGG 0.343876 7.1:-18574137 None:intergenic
TTAAGTTTAGCATCTTCTAT+TGG 0.361231 7.1:-18573470 None:intergenic
CTCTTCTTCCTCCTCAGAAA+AGG 0.362113 7.1:-18573961 None:intergenic
ACTATCTCAAGCACCATTGA+TGG 0.370339 7.1:+18574206 MS.gene013861:CDS
AAAGCACCCATCTTCTACTT+TGG 0.377594 7.1:-18573336 None:intergenic
AATTGAGATATTGGACCTAT+TGG 0.389765 7.1:-18574814 None:intergenic
ATAAAATGTATGGTAACAAA+TGG 0.396082 7.1:+18574000 MS.gene013861:CDS
AGGAGTGAGTGAGAGATTAG+TGG 0.396526 7.1:-18574243 None:intergenic
TTAGCTGCTCATAAAATGTA+TGG 0.406757 7.1:+18573990 MS.gene013861:CDS
TCCTTTGACAAACCCTGAAA+AGG 0.411626 7.1:+18573280 MS.gene013861:CDS
AGCTTTGTTCTAGAGGTCAT+TGG 0.416349 7.1:+18573444 MS.gene013861:CDS
GTTTGTCAAAGGAAGAGCTT+TGG 0.416396 7.1:-18573270 None:intergenic
AATAGAAGATGCTAAACTTA+AGG 0.419512 7.1:+18573472 MS.gene013861:CDS
AGCTCTGTTTCTGTGAAAGT+TGG 0.422370 7.1:+18573413 MS.gene013861:CDS
ACAAGATGAGTTGAAGGAAT+AGG 0.438760 7.1:-18573242 None:intergenic
AACAGTGTACTGTGTATAGA+AGG 0.441649 7.1:+18574108 MS.gene013861:CDS
CAAGGCTATGGATCACTAAT+GGG 0.446395 7.1:+18574326 MS.gene013861:CDS
TAGCCTTGATGATTCTCAAC+TGG 0.451993 7.1:-18574311 None:intergenic
TTGATTGCAGAACATCTTGA+AGG 0.454431 7.1:+18573530 MS.gene013861:CDS
TTTAAGTCCAAAGTAGAAGA+TGG 0.458745 7.1:+18573329 MS.gene013861:CDS
GGACTTAGTTTAGCTGAAGA+AGG 0.460680 7.1:-18574263 None:intergenic
AGTTGAGACATTTCCATCAA+TGG 0.463655 7.1:-18574219 None:intergenic
ACTTTGGACTTAAACATTGA+GGG 0.468793 7.1:-18573320 None:intergenic
ATAATGCAGTGAAGAATCAT+TGG 0.470220 7.1:+18574057 MS.gene013861:CDS
GAGAAAGTGTGGTGGCAACT+AGG 0.473551 7.1:+18574652 MS.gene013861:CDS
AGAAAGTGTGGTGGCAACTA+GGG 0.475189 7.1:+18574653 MS.gene013861:CDS
GATGGGTGCTTTGAGGTTCA+AGG 0.478786 7.1:+18573347 MS.gene013861:CDS
TACTTTGGACTTAAACATTG+AGG 0.483288 7.1:-18573321 None:intergenic
GAATCAACAAGATGAGTTGA+AGG 0.483992 7.1:-18573248 None:intergenic
GAACATCTTGAAGGAAGATC+AGG 0.486206 7.1:+18573539 MS.gene013861:CDS
GTTGAAGGAATAGGAGCTAA+AGG 0.488826 7.1:-18573233 None:intergenic
CCTTTGACAAACCCTGAAAA+GGG 0.491757 7.1:+18573281 MS.gene013861:CDS
CTGAGTCAGTTACCACCAAT+AGG 0.493276 7.1:+18574799 MS.gene013861:CDS
GTTGAGAATCATCAAGGCTA+TGG 0.503739 7.1:+18574314 MS.gene013861:CDS
TACTCCAAGCTTTGTTCTAG+AGG 0.507196 7.1:+18573437 MS.gene013861:CDS
TAAAATGTATGGTAACAAAT+GGG 0.508678 7.1:+18574001 MS.gene013861:CDS
ACTCCAAGAAAATCAATGAA+TGG 0.522689 7.1:-18574882 None:intergenic
TGAGATATTGGACCTATTGG+TGG 0.526375 7.1:-18574811 None:intergenic
TGTTGTTGAAAGTCTTTCAA+AGG 0.527307 7.1:+18574142 MS.gene013861:CDS
AGTAGAAGATGGGTGCTTTG+AGG 0.530721 7.1:+18573340 MS.gene013861:CDS
GAATCATTGGCATGTGATCA+TGG 0.539113 7.1:+18574070 MS.gene013861:CDS
GTTCCAGTTGAGAATCATCA+AGG 0.546707 7.1:+18574308 MS.gene013861:CDS
TGATCATGGCTAGAAGACAT+AGG 0.551949 7.1:+18574084 MS.gene013861:CDS
ATGACCTCTAGAACAAAGCT+TGG 0.553743 7.1:-18573441 None:intergenic
ACTGCATTATCTGTCCTCCC+TGG 0.564600 7.1:-18574044 None:intergenic
GATCATGGCTAGAAGACATA+GGG 0.580957 7.1:+18574085 MS.gene013861:CDS
AAAGCTAATAGATGTGGTGG+TGG 0.583743 7.1:+18574734 MS.gene013861:CDS
TCTGGTGAAAGTGAAAATGT+TGG 0.594833 7.1:+18574837 MS.gene013861:CDS
TTAAGTCCAAAGTAGAAGAT+GGG 0.595363 7.1:+18573330 MS.gene013861:CDS
GCTAAAGCTAATAGATGTGG+TGG 0.598165 7.1:+18574731 MS.gene013861:CDS
ACTAGTTTATCAAACAGTTG+AGG 0.605771 7.1:-18574284 None:intergenic
AAAGCTAAAGCTAATAGATG+TGG 0.612393 7.1:+18574728 MS.gene013861:CDS
TTGTAAGAAGAATGAACAAG+TGG 0.631441 7.1:+18574704 MS.gene013861:CDS
ACTTCACAAAAGTTCAACAA+TGG 0.637959 7.1:+18573188 MS.gene013861:CDS
AGACAAATCTAGAGAAAGTG+TGG 0.652450 7.1:+18574641 MS.gene013861:intron
CAAATCTAGAGAAAGTGTGG+TGG 0.706572 7.1:+18574644 MS.gene013861:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAATATTTATAAATT+GGG + chr7.1:18573782-18573801 MS.gene013861:intron 0.0%
!!! TTTTTTTAATATTTATAAAT+TGG + chr7.1:18573781-18573800 MS.gene013861:intron 0.0%
!!! CTTTAATATTTTGTTAAAAA+TGG - chr7.1:18573580-18573599 None:intergenic 10.0%
!!! TTAATATTTTGTTAAAAATG+GGG - chr7.1:18573578-18573597 None:intergenic 10.0%
!! AAAATATTAAAATACATGCA+AGG - chr7.1:18573863-18573882 None:intergenic 15.0%
!! ATATTTAATAATCTCTCATT+AGG + chr7.1:18574355-18574374 MS.gene013861:intron 15.0%
!! ATAAAATGTATGGTAACAAA+TGG + chr7.1:18574000-18574019 MS.gene013861:CDS 20.0%
!! GCTTATAATAGTATAAAACA+TGG + chr7.1:18574377-18574396 MS.gene013861:intron 20.0%
!! TAAAATGTATGGTAACAAAT+GGG + chr7.1:18574001-18574020 MS.gene013861:CDS 20.0%
!!! TTTTGTTCAATTTTAATTGC+AGG + chr7.1:18573882-18573901 MS.gene013861:intron 20.0%
! AATAGAAGATGCTAAACTTA+AGG + chr7.1:18573472-18573491 MS.gene013861:CDS 25.0%
! ACTAATAGTAACTAATTTCG+TGG - chr7.1:18574559-18574578 None:intergenic 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG - chr7.1:18574766-18574785 None:intergenic 25.0%
! GTTATGTAAACAATTCAGTT+TGG - chr7.1:18574592-18574611 None:intergenic 25.0%
! TTAAGTTTAGCATCTTCTAT+TGG - chr7.1:18573473-18573492 None:intergenic 25.0%
!!! AAAAACTTGTCTTTGAAACT+TGG + chr7.1:18573371-18573390 MS.gene013861:CDS 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG - chr7.1:18573945-18573964 None:intergenic 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG - chr7.1:18573944-18573963 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG + chr7.1:18574678-18574697 MS.gene013861:CDS 25.0%
!!! TAAAACATGGTTTTAAGTTG+CGG + chr7.1:18574390-18574409 MS.gene013861:intron 25.0%
AAAGCTAAAGCTAATAGATG+TGG + chr7.1:18574728-18574747 MS.gene013861:CDS 30.0%
AATTGAGATATTGGACCTAT+TGG - chr7.1:18574817-18574836 None:intergenic 30.0%
ACTCCAAGAAAATCAATGAA+TGG - chr7.1:18574885-18574904 None:intergenic 30.0%
ACTTCACAAAAGTTCAACAA+TGG + chr7.1:18573188-18573207 MS.gene013861:CDS 30.0%
ACTTTGGACTTAAACATTGA+GGG - chr7.1:18573323-18573342 None:intergenic 30.0%
ATAATGCAGTGAAGAATCAT+TGG + chr7.1:18574057-18574076 MS.gene013861:CDS 30.0%
ATTTCCATTTCTGTAATGTG+AGG + chr7.1:18573826-18573845 MS.gene013861:intron 30.0%
CGCAATATAAATATTCGTAG+CGG - chr7.1:18574424-18574443 None:intergenic 30.0%
CGCTACGAATATTTATATTG+CGG + chr7.1:18574422-18574441 MS.gene013861:intron 30.0%
TACTTTGGACTTAAACATTG+AGG - chr7.1:18573324-18573343 None:intergenic 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG + chr7.1:18574142-18574161 MS.gene013861:CDS 30.0%
TTAAGTCCAAAGTAGAAGAT+GGG + chr7.1:18573330-18573349 MS.gene013861:CDS 30.0%
TTAGCTGCTCATAAAATGTA+TGG + chr7.1:18573990-18574009 MS.gene013861:CDS 30.0%
TTCACCAGAAATTGAGATAT+TGG - chr7.1:18574826-18574845 None:intergenic 30.0%
TTGAATCTGAAAAATTGGAC+TGG - chr7.1:18574761-18574780 None:intergenic 30.0%
TTGTAAGAAGAATGAACAAG+TGG + chr7.1:18574704-18574723 MS.gene013861:CDS 30.0%
TTTAAGTCCAAAGTAGAAGA+TGG + chr7.1:18573329-18573348 MS.gene013861:CDS 30.0%
TTTATATTGCGGTAAAGTGT+AGG + chr7.1:18574433-18574452 MS.gene013861:intron 30.0%
! ACTAGTTTATCAAACAGTTG+AGG - chr7.1:18574287-18574306 None:intergenic 30.0%
! ATTTTGTTAAAAATGGGGAG+AGG - chr7.1:18573573-18573592 None:intergenic 30.0%
! CAACAAAAAAACCTTTTCTG+AGG + chr7.1:18573950-18573969 MS.gene013861:CDS 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG + chr7.1:18574026-18574045 MS.gene013861:CDS 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG + chr7.1:18574027-18574046 MS.gene013861:CDS 30.0%
!! TTCTAGAGTAAATGCATGTT+TGG + chr7.1:18573616-18573635 MS.gene013861:intron 30.0%
!!! CTACCATTCATTGATTTTCT+TGG + chr7.1:18574879-18574898 MS.gene013861:CDS 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG + chr7.1:18574885-18574904 MS.gene013861:CDS 30.0%
AACAGTGTACTGTGTATAGA+AGG + chr7.1:18574108-18574127 MS.gene013861:CDS 35.0%
AGACAAATCTAGAGAAAGTG+TGG + chr7.1:18574641-18574660 MS.gene013861:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG + chr7.1:18574819-18574838 MS.gene013861:CDS 35.0%
AGTTGAGACATTTCCATCAA+TGG - chr7.1:18574222-18574241 None:intergenic 35.0%
CAGGAAAAAGTTGTAGATTG+AGG + chr7.1:18573901-18573920 MS.gene013861:intron 35.0%
CATCACAATTGTAAATGCGA+CGG - chr7.1:18574473-18574492 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG + chr7.1:18573504-18573523 MS.gene013861:CDS 35.0%
GAAAAAGTTGTAGATTGAGG+TGG + chr7.1:18573904-18573923 MS.gene013861:CDS 35.0%
GAAAGACTTTCAACAACAAC+TGG - chr7.1:18574140-18574159 None:intergenic 35.0%
TCTGGTGAAAGTGAAAATGT+TGG + chr7.1:18574837-18574856 MS.gene013861:CDS 35.0%
TTGATTGCAGAACATCTTGA+AGG + chr7.1:18573530-18573549 MS.gene013861:CDS 35.0%
! AAAATCTGAAGACCCTTTTC+AGG - chr7.1:18573296-18573315 None:intergenic 35.0%
! AAATCTGAAGACCCTTTTCA+GGG - chr7.1:18573295-18573314 None:intergenic 35.0%
! ACAAGATGAGTTGAAGGAAT+AGG - chr7.1:18573245-18573264 None:intergenic 35.0%
! GAATCAACAAGATGAGTTGA+AGG - chr7.1:18573251-18573270 None:intergenic 35.0%
! GCAATCAAGTTCCAATTTTG+AGG - chr7.1:18573518-18573537 None:intergenic 35.0%
!! CAAAAAAACCTTTTCTGAGG+AGG + chr7.1:18573953-18573972 MS.gene013861:CDS 35.0%
AAAGCTAATAGATGTGGTGG+TGG + chr7.1:18574734-18574753 MS.gene013861:CDS 40.0%
AATTGTAAATGCGACGGCAT+CGG - chr7.1:18574467-18574486 None:intergenic 40.0%
ACTATCTCAAGCACCATTGA+TGG + chr7.1:18574206-18574225 MS.gene013861:CDS 40.0%
CAAGGCTATGGATCACTAAT+GGG + chr7.1:18574326-18574345 MS.gene013861:CDS 40.0%
CCATTTCTGTAATGTGAGGA+AGG + chr7.1:18573830-18573849 MS.gene013861:intron 40.0%
CCTTCCTCACATTACAGAAA+TGG - chr7.1:18573833-18573852 None:intergenic 40.0%
CCTTTGACAAACCCTGAAAA+GGG + chr7.1:18573281-18573300 MS.gene013861:CDS 40.0%
GAACATCTTGAAGGAAGATC+AGG + chr7.1:18573539-18573558 MS.gene013861:CDS 40.0%
GAATCATTGGCATGTGATCA+TGG + chr7.1:18574070-18574089 MS.gene013861:CDS 40.0%
GATCATGGCTAGAAGACATA+GGG + chr7.1:18574085-18574104 MS.gene013861:CDS 40.0%
GCTAAAGCTAATAGATGTGG+TGG + chr7.1:18574731-18574750 MS.gene013861:CDS 40.0%
GGACTTAGTTTAGCTGAAGA+AGG - chr7.1:18574266-18574285 None:intergenic 40.0%
GTTCCAGTTGAGAATCATCA+AGG + chr7.1:18574308-18574327 MS.gene013861:CDS 40.0%
GTTGAAGGAATAGGAGCTAA+AGG - chr7.1:18573236-18573255 None:intergenic 40.0%
GTTGAGAATCATCAAGGCTA+TGG + chr7.1:18574314-18574333 MS.gene013861:CDS 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG - chr7.1:18573273-18573292 None:intergenic 40.0%
TCAAGGCTATGGATCACTAA+TGG + chr7.1:18574325-18574344 MS.gene013861:CDS 40.0%
TCCTTTGACAAACCCTGAAA+AGG + chr7.1:18573280-18573299 MS.gene013861:CDS 40.0%
TGAGATATTGGACCTATTGG+TGG - chr7.1:18574814-18574833 None:intergenic 40.0%
TGATCATGGCTAGAAGACAT+AGG + chr7.1:18574084-18574103 MS.gene013861:CDS 40.0%
! AAAGCACCCATCTTCTACTT+TGG - chr7.1:18573339-18573358 None:intergenic 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG + chr7.1:18574644-18574663 MS.gene013861:CDS 40.0%
! GCATGTTTAGAATCATGACG+AGG + chr7.1:18574513-18574532 MS.gene013861:intron 40.0%
! TAGCCTTGATGATTCTCAAC+TGG - chr7.1:18574314-18574333 None:intergenic 40.0%
! TGTTTAGAATCATGACGAGG+TGG + chr7.1:18574516-18574535 MS.gene013861:intron 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG + chr7.1:18573491-18573510 MS.gene013861:CDS 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG + chr7.1:18573413-18573432 MS.gene013861:CDS 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG + chr7.1:18573444-18573463 MS.gene013861:CDS 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG - chr7.1:18573444-18573463 None:intergenic 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG + chr7.1:18573437-18573456 MS.gene013861:CDS 40.0%
!! TCATCACTTTGAGACACAAC+AGG - chr7.1:18573665-18573684 None:intergenic 40.0%
AGGAGTGAGTGAGAGATTAG+TGG - chr7.1:18574246-18574265 None:intergenic 45.0%
AGTAGAAGATGGGTGCTTTG+AGG + chr7.1:18573340-18573359 MS.gene013861:CDS 45.0%
CTCTTCTTCCTCCTCAGAAA+AGG - chr7.1:18573964-18573983 None:intergenic 45.0%
CTGAGTCAGTTACCACCAAT+AGG + chr7.1:18574799-18574818 MS.gene013861:CDS 45.0%
GCGGTAAAGTGTAGGCAAAT+GGG + chr7.1:18574441-18574460 MS.gene013861:intron 45.0%
TGCGGTAAAGTGTAGGCAAA+TGG + chr7.1:18574440-18574459 MS.gene013861:intron 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG + chr7.1:18574653-18574672 MS.gene013861:CDS 45.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG - chr7.1:18573284-18573303 None:intergenic 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG + chr7.1:18574030-18574049 MS.gene013861:CDS 45.0%
!!! TTTAATATTTTGTTAAAAAT+GGG - chr7.1:18573579-18573598 None:intergenic 5.0%
!!! TTTTTAATATTTATAAATTG+GGG + chr7.1:18573783-18573802 MS.gene013861:intron 5.0%
ACTGCATTATCTGTCCTCCC+TGG - chr7.1:18574047-18574066 None:intergenic 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG + chr7.1:18574652-18574671 MS.gene013861:CDS 50.0%
!! GATGGGTGCTTTGAGGTTCA+AGG + chr7.1:18573347-18573366 MS.gene013861:CDS 50.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 18573185 18574923 18573185 ID=MS.gene013861
chr7.1 mRNA 18573185 18574923 18573185 ID=MS.gene013861.t1;Parent=MS.gene013861
chr7.1 exon 18573185 18573560 18573185 ID=MS.gene013861.t1.exon1;Parent=MS.gene013861.t1
chr7.1 CDS 18573185 18573560 18573185 ID=cds.MS.gene013861.t1;Parent=MS.gene013861.t1
chr7.1 exon 18573904 18574347 18573904 ID=MS.gene013861.t1.exon2;Parent=MS.gene013861.t1
chr7.1 CDS 18573904 18574347 18573904 ID=cds.MS.gene013861.t1;Parent=MS.gene013861.t1
chr7.1 exon 18574643 18574923 18574643 ID=MS.gene013861.t1.exon3;Parent=MS.gene013861.t1
chr7.1 CDS 18574643 18574923 18574643 ID=cds.MS.gene013861.t1;Parent=MS.gene013861.t1
Gene Sequence

>MS.gene013861

ATGACTTCACAAAAGTTCAACAATGGTGATATCAATATGAGTCTTTTTCCTTTAGCTCCTATTCCTTCAACTCATCTTGTTGATTCCAAAGCTCTTCCTTTGACAAACCCTGAAAAGGGTCTTCAGATTTTGAGACCCTCAATGTTTAAGTCCAAAGTAGAAGATGGGTGCTTTGAGGTTCAAGGAAAAAACTTGTCTTTGAAACTTGGTAATGAAGTAGAAGATAAAAGCTCTGTTTCTGTGAAAGTTGGATACTCCAAGCTTTGTTCTAGAGGTCATTGGAGACCAATAGAAGATGCTAAACTTAAGGAGCTTGTTGCTGAATATGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGAAGGAAGATCAGGTGATTCATCCTCTCCCCATTTTTAACAAAATATTAAAGTTTATGTTTAGATGAATTCTAGAGTAAATGCATGTTTGGATTTAGTAAGAGCTTAGCATAATCCTGTTGTGTCTCAAAGTGATGATATTAACAAAAGTTGCATTTTTTAACTTCAACAAAATCAACATATCAATGTGATTTTACAATATTTTTTTTAAGTAGTATTTCTAAAGTTCAATACTTTTTTTAATATTTATAAATTGGGGTGTGAAAAAATTTGTGCTTGATTTCCATTTCTGTAATGTGAGGAAGGAATAAAACCTTGCATGTATTTTAATATTTTTTTGTTCAATTTTAATTGCAGGAAAAAGTTGTAGATTGAGGTGGTTCAATCAGCTAGACCCAAGAATCAACAAAAAAACCTTTTCTGAGGAGGAAGAAGAGAGACTTTTAGCTGCTCATAAAATGTATGGTAACAAATGGGCTATAATTGCTAGACTTTTTCCAGGGAGGACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGAAGACATAGGGAACAGTGTACTGTGTATAGAAGGAGAAAGCCAGTTGTTGTTGAAAGTCTTTCAAAGGATTTAAAATTAAGTCTTTCAAACAATGCAGCTAGTGATTCAACTATCTCAAGCACCATTGATGGAAATGTCTCAACTTCCACTAATCTCTCACTCACTCCTTCTTCAGCTAAACTAAGTCCTCAACTGTTTGATAAACTAGTTGTTCCAGTTGAGAATCATCAAGGCTATGGATCACTAATGGGTATGCAATATTTAATAATCTCTCATTAGGCTTATAATAGTATAAAACATGGTTTTAAGTTGCGGTTATGATTCCGCTACGAATATTTATATTGCGGTAAAGTGTAGGCAAATGGGCCGATGCCGTCGCATTTACAATTGTGATGTTTTTGTATATACTATAAGTGCATGTTTAGAATCATGACGAGGTGGTGCGTCATGATTCTAAACCACGAAATTAGTTACTATTAGTTTTTTCATGTCCAAACTGAATTGTTTACATAACATATGTTACATTATGTGATGTGTAATTGCAGACAAATCTAGAGAAAGTGTGGTGGCAACTAGGGATGTGAATTTTGACAAGTATTTTGGAGCTTGTAAGAAGAATGAACAAGTGGAAAAGCTAAAGCTAATAGATGTGGTGGTGGACCAGTCCAATTTTTCAGATTCAAACTCTGAAGTATCAGTATCTGAGTCAGTTACCACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGGTGTTAAGATAAACATGTTACTACCATTCATTGATTTTCTTGGAGTAGGAGCTATACAAAGCTAA
Protein sequence

>MS.gene013861.t1

MTSQKFNNGDINMSLFPLAPIPSTHLVDSKALPLTNPEKGLQILRPSMFKSKVEDGCFEVQGKNLSLKLGNEVEDKSSVSVKVGYSKLCSRGHWRPIEDAKLKELVAEYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINKKTFSEEEEERLLAAHKMYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQCTVYRRRKPVVVESLSKDLKLSLSNNAASDSTISSTIDGNVSTSTNLSLTPSSAKLSPQLFDKLVVPVENHQGYGSLMDKSRESVVATRDVNFDKYFGACKKNEQVEKLKLIDVVVDQSNFSDSNSEVSVSESVTTNRSNISISGESENVGVKINMLLPFIDFLGVGAIQS