AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013948

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013948.t1 MTR_3g012010 28.767 219 136 7 78 287 98 305 9.85e-15 73.2
MS.gene013948.t1 MTR_2g067740 40.816 98 51 4 78 168 59 156 3.49e-14 70.5
MS.gene013948.t1 MTR_8g466760 28.814 236 106 12 78 287 98 297 1.25e-13 70.1
MS.gene013948.t1 MTR_3g009410 27.074 229 127 7 78 287 98 305 5.12e-12 65.5
MS.gene013948.t1 MTR_7g026977 44.286 70 29 2 78 137 148 217 7.83e-12 65.5
MS.gene013948.t1 MTR_5g008280 40.449 89 35 3 77 157 45 123 8.29e-12 65.5
MS.gene013948.t1 MTR_3g011990 27.660 235 109 8 78 287 98 296 8.78e-12 64.7
MS.gene013948.t1 MTR_1g033340 41.509 106 46 6 11 110 34 129 2.89e-11 62.8
MS.gene013948.t1 MTR_1g013130 37.190 121 70 3 62 182 79 193 9.90e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013948.t1 AT5G25160 40.000 105 45 3 78 182 59 145 3.84e-11 62.4

Find 100 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTGGGATGAATAATTTA+TGG 0.162779 7.2:-19917745 MS.gene013948:CDS
TCCCTTGCAACACCACAATT+TGG 0.181385 7.2:-19917761 MS.gene013948:CDS
TGAACAATTCCTTGCCTTCT+TGG 0.192209 7.2:-19917874 MS.gene013948:CDS
TGGCTTGGTGGTTCATCTTC+TGG 0.227050 7.2:-19917854 MS.gene013948:CDS
CGTGATGCAGGAGGTGTATT+TGG 0.246247 7.2:+19917809 None:intergenic
TCAGAAGATGCCTCAGAAAT+TGG 0.273890 7.2:+19917635 None:intergenic
CCCACAGTGTTTGATCTTTG+TGG 0.295932 7.2:+19917692 None:intergenic
CTGTCATCTTCATCTTCAAT+AGG 0.321326 7.2:+19917569 None:intergenic
TTGGAGAATGGTGAGCATTC+AGG 0.322095 7.2:-19918196 MS.gene013948:CDS
CAAGTTCAGTTCCTCCTCAT+TGG 0.324355 7.2:+19917532 None:intergenic
AATTCCTTGCCTTCTTGGCT+TGG 0.353374 7.2:-19917869 MS.gene013948:CDS
CCCTTGCAACACCACAATTT+GGG 0.353563 7.2:-19917760 MS.gene013948:CDS
GAGGTTGGTGGTGATGTCTT+TGG 0.357363 7.2:+19918286 None:intergenic
ATTTGGGATGAATAATTTAT+GGG 0.357825 7.2:-19917744 MS.gene013948:CDS
AAGTTCAGTTCCTCCTCATT+GGG 0.363891 7.2:+19917533 None:intergenic
TCCTTGCCTTCTTGGCTTGG+TGG 0.368207 7.2:-19917866 MS.gene013948:CDS
CTCACCATTCTCCAAGGGTT+TGG 0.371444 7.2:+19918204 None:intergenic
AAGATCAAACACTGTGGGTT+TGG 0.398899 7.2:-19917687 MS.gene013948:CDS
GGTTCATCTTCTGGTGGCTA+TGG 0.403832 7.2:-19917845 MS.gene013948:CDS
GGATATTTGATCGATACCTT+AGG 0.410338 7.2:+19917990 None:intergenic
TGTTCACATGGGAACCAATT+GGG 0.426738 7.2:+19917891 None:intergenic
TTCCCCACTTCTCAAGCGCT+TGG 0.427846 7.2:-19918094 MS.gene013948:CDS
GCGCAAAATGATGGAGGATT+CGG 0.431644 7.2:-19918335 MS.gene013948:CDS
TTGTTCACATGGGAACCAAT+TGG 0.439864 7.2:+19917890 None:intergenic
AATTCCTTCACTTGCGGCAC+AGG 0.441324 7.2:+19918142 None:intergenic
CAATGAGGAGGAACTGAACT+TGG 0.445260 7.2:-19917531 MS.gene013948:CDS
TTCACTTGCGGCACAGGTGG+AGG 0.445355 7.2:+19918148 None:intergenic
GGAGAGCTTGAAAATTGATA+AGG 0.446609 7.2:+19917959 None:intergenic
GATTTCTTGACCTTGAGGCT+TGG 0.452474 7.2:-19918247 MS.gene013948:CDS
GCTCACGCTTATGAGCGTTT+TGG 0.454295 7.2:+19918065 None:intergenic
TTCTTGACCTTGAGGCTTGG+CGG 0.462476 7.2:-19918244 MS.gene013948:CDS
CCCACTTCTCAAGCGCTTGG+AGG 0.464114 7.2:-19918091 MS.gene013948:CDS
TCATCTTCTGGTGGCTATGG+AGG 0.469395 7.2:-19917842 MS.gene013948:CDS
GCTAGCCTGGCCAACCCAAT+TGG 0.470467 7.2:-19917905 MS.gene013948:CDS
CCAACCTCTGGATCGGATGC+TGG 0.471452 7.2:-19918271 MS.gene013948:CDS
ATTCTCCAAGGGTTTGGAAG+TGG 0.473353 7.2:+19918210 None:intergenic
GAGAGCTTGAAAATTGATAA+GGG 0.474183 7.2:+19917960 None:intergenic
GGGAACCAATTGGGTTGGCC+AGG 0.476365 7.2:+19917900 None:intergenic
ATATTTCCGTAGTGCTAGCC+TGG 0.476473 7.2:-19917918 MS.gene013948:CDS
AAACCTCAAGCGCAAAATGA+TGG 0.477017 7.2:-19918344 MS.gene013948:CDS
GATATTTGATCGATACCTTA+GGG 0.478593 7.2:+19917991 None:intergenic
CTTGAAAATTGATAAGGGTA+TGG 0.487010 7.2:+19917965 None:intergenic
TTCGGAGCAAGAGTCGAAAT+CGG 0.492293 7.2:-19918317 MS.gene013948:CDS
AATTTCTGAGGCATCTTCTG+AGG 0.495312 7.2:-19917633 MS.gene013948:CDS
TCCTTCACTTGCGGCACAGG+TGG 0.495412 7.2:+19918145 None:intergenic
GTGTTTGATCTTTGTGGAGT+TGG 0.498368 7.2:+19917698 None:intergenic
GGCATCACAAATCGTGATGC+AGG 0.498721 7.2:+19917797 None:intergenic
AAGACATCACCACCAACCTC+TGG 0.499816 7.2:-19918283 MS.gene013948:CDS
TCCCAAATTGTGGTGTTGCA+AGG 0.499889 7.2:+19917759 None:intergenic
TTCTCCAAGGGTTTGGAAGT+GGG 0.501108 7.2:+19918211 None:intergenic
CATCTTCTGGTGGCTATGGA+GGG 0.505349 7.2:-19917841 MS.gene013948:CDS
ACTTCCAAACCCTTGGAGAA+TGG 0.510882 7.2:-19918208 MS.gene013948:CDS
TCCTCCAAGCGCTTGAGAAG+TGG 0.512717 7.2:+19918090 None:intergenic
GATGAACCACCAAGCCAAGA+AGG 0.518609 7.2:+19917860 None:intergenic
GCAAGAGTCGAAATCGGAGA+AGG 0.519914 7.2:-19918311 MS.gene013948:CDS
AAATCCCACTTCCAAACCCT+TGG 0.521354 7.2:-19918215 MS.gene013948:CDS
AAAATTGATAAGGGTATGGA+AGG 0.527390 7.2:+19917969 None:intergenic
GAAGATGCCTCAGAAATTGG+AGG 0.529710 7.2:+19917638 None:intergenic
CTGGCGATTTCTTGACCTTG+AGG 0.533323 7.2:-19918252 MS.gene013948:CDS
CACATGGGAACCAATTGGGT+TGG 0.534413 7.2:+19917895 None:intergenic
TTGACCTTGAGGCTTGGCGG+TGG 0.537816 7.2:-19918241 MS.gene013948:CDS
CCTCCAAGCGCTTGAGAAGT+GGG 0.545861 7.2:+19918091 None:intergenic
TACGGAAATATGAATACCCT+TGG 0.547864 7.2:+19917930 None:intergenic
ATGAATAATTTATGGGGTGG+AGG 0.548808 7.2:-19917737 MS.gene013948:CDS
GGGATGAATAATTTATGGGG+TGG 0.553703 7.2:-19917740 MS.gene013948:CDS
CTTGGTGGTTCATCTTCTGG+TGG 0.555595 7.2:-19917851 MS.gene013948:CDS
AATGGAAGAACAAAGGAGAG+AGG 0.557192 7.2:-19918029 MS.gene013948:CDS
TATGAATACCCTTGGTAGTG+TGG 0.561783 7.2:+19917938 None:intergenic
CCCAAATTGTGGTGTTGCAA+GGG 0.562024 7.2:+19917760 None:intergenic
TCCACCTGTGCCGCAAGTGA+AGG 0.562222 7.2:-19918146 MS.gene013948:CDS
AAATTATTCATCCCAAATTG+TGG 0.569543 7.2:+19917749 None:intergenic
TGAATGCTCACCATTCTCCA+AGG 0.576662 7.2:+19918198 None:intergenic
ACCACCAAGCCAAGAAGGCA+AGG 0.577515 7.2:+19917865 None:intergenic
ATGTGATCGATTCAGCCCTA+AGG 0.581100 7.2:-19918006 MS.gene013948:CDS
CAAGCTCTCCACACTACCAA+GGG 0.581296 7.2:-19917946 MS.gene013948:CDS
GCAAGGGATGAATTTGACAT+TGG 0.586827 7.2:+19917776 None:intergenic
ATCACCACCAACCTCTGGAT+CGG 0.589780 7.2:-19918278 MS.gene013948:CDS
GAATGCTCACCATTCTCCAA+GGG 0.590384 7.2:+19918199 None:intergenic
CCAGCATCCGATCCAGAGGT+TGG 0.592460 7.2:+19918271 None:intergenic
CAAGAGAATTCCTTCACTTG+CGG 0.593057 7.2:+19918136 None:intergenic
TCAAGCTCTCCACACTACCA+AGG 0.596295 7.2:-19917947 MS.gene013948:CDS
TTTGGGATGAATAATTTATG+GGG 0.599177 7.2:-19917743 MS.gene013948:CDS
TGTGCCACCGCCAAGCCTCA+AGG 0.601323 7.2:+19918237 None:intergenic
AAGATGCCTCAGAAATTGGA+GGG 0.602431 7.2:+19917639 None:intergenic
GCATCCGATCCAGAGGTTGG+TGG 0.602933 7.2:+19918274 None:intergenic
GGTTGGCCAGGCTAGCACTA+CGG 0.608827 7.2:+19917912 None:intergenic
AAGGCAAGGAATTGTTCACA+TGG 0.612872 7.2:+19917879 None:intergenic
AGATGAAGATGACAGAAATG+AGG 0.616572 7.2:-19917561 MS.gene013948:CDS
ATCGCCAGCATCCGATCCAG+AGG 0.630563 7.2:+19918267 None:intergenic
CCACAAAGATCAAACACTGT+GGG 0.631128 7.2:-19917692 MS.gene013948:CDS
CTCCAAGCGCTTGAGAAGTG+GGG 0.636012 7.2:+19918092 None:intergenic
TCAAACCCCTCCAATTTCTG+AGG 0.642241 7.2:-19917645 MS.gene013948:CDS
AGATGCCTCAGAAATTGGAG+GGG 0.652285 7.2:+19917640 None:intergenic
TGAGGCTAATCCCAATGAGG+AGG 0.655080 7.2:-19917543 MS.gene013948:CDS
CCTCAAGCGCAAAATGATGG+AGG 0.656497 7.2:-19918341 MS.gene013948:CDS
ATCACAAATCGTGATGCAGG+AGG 0.664503 7.2:+19917800 None:intergenic
TCTTCAATAGGATCATGAGA+AGG 0.673021 7.2:+19917581 None:intergenic
AAATGAGGCTAATCCCAATG+AGG 0.702908 7.2:-19917546 MS.gene013948:CDS
AGGCAAGGAATTGTTCACAT+GGG 0.705162 7.2:+19917880 None:intergenic
TCCACAAAGATCAAACACTG+TGG 0.713784 7.2:-19917693 MS.gene013948:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGGGATGAATAATTTA+TGG - chr7.2:19918130-19918149 MS.gene013948:CDS 20.0%
!!! ATTTGGGATGAATAATTTAT+GGG - chr7.2:19918131-19918150 MS.gene013948:CDS 20.0%
! AAATTATTCATCCCAAATTG+TGG + chr7.2:19918129-19918148 None:intergenic 25.0%
! TCAAAAAAATGGAAGAACAA+AGG - chr7.2:19917839-19917858 MS.gene013948:CDS 25.0%
!! TTTGGGATGAATAATTTATG+GGG - chr7.2:19918132-19918151 MS.gene013948:CDS 25.0%
CTTGAAAATTGATAAGGGTA+TGG + chr7.2:19917913-19917932 None:intergenic 30.0%
GAGAGCTTGAAAATTGATAA+GGG + chr7.2:19917918-19917937 None:intergenic 30.0%
GATATTTGATCGATACCTTA+GGG + chr7.2:19917887-19917906 None:intergenic 30.0%
! AAAATTGATAAGGGTATGGA+AGG + chr7.2:19917909-19917928 None:intergenic 30.0%
AGATGAAGATGACAGAAATG+AGG - chr7.2:19918314-19918333 MS.gene013948:CDS 35.0%
ATGAATAATTTATGGGGTGG+AGG - chr7.2:19918138-19918157 MS.gene013948:CDS 35.0%
CTGTCATCTTCATCTTCAAT+AGG + chr7.2:19918309-19918328 None:intergenic 35.0%
GGAGAGCTTGAAAATTGATA+AGG + chr7.2:19917919-19917938 None:intergenic 35.0%
GGATATTTGATCGATACCTT+AGG + chr7.2:19917888-19917907 None:intergenic 35.0%
TACGGAAATATGAATACCCT+TGG + chr7.2:19917948-19917967 None:intergenic 35.0%
TCTTCAATAGGATCATGAGA+AGG + chr7.2:19918297-19918316 None:intergenic 35.0%
TGAGCGTGTCTTCAAAAAAA+TGG - chr7.2:19917828-19917847 MS.gene013948:CDS 35.0%
AAACCTCAAGCGCAAAATGA+TGG - chr7.2:19917531-19917550 MS.gene013948:CDS 40.0%
AAATGAGGCTAATCCCAATG+AGG - chr7.2:19918329-19918348 MS.gene013948:CDS 40.0%
AAGATCAAACACTGTGGGTT+TGG - chr7.2:19918188-19918207 MS.gene013948:CDS 40.0%
AAGATGCCTCAGAAATTGGA+GGG + chr7.2:19918239-19918258 None:intergenic 40.0%
AAGGCAAGGAATTGTTCACA+TGG + chr7.2:19917999-19918018 None:intergenic 40.0%
AAGTTCAGTTCCTCCTCATT+GGG + chr7.2:19918345-19918364 None:intergenic 40.0%
AATGGAAGAACAAAGGAGAG+AGG - chr7.2:19917846-19917865 MS.gene013948:CDS 40.0%
AGGCAAGGAATTGTTCACAT+GGG + chr7.2:19917998-19918017 None:intergenic 40.0%
CAAGAGAATTCCTTCACTTG+CGG + chr7.2:19917742-19917761 None:intergenic 40.0%
CCACAAAGATCAAACACTGT+GGG - chr7.2:19918183-19918202 MS.gene013948:CDS 40.0%
GCAAGGGATGAATTTGACAT+TGG + chr7.2:19918102-19918121 None:intergenic 40.0%
GGGATGAATAATTTATGGGG+TGG - chr7.2:19918135-19918154 MS.gene013948:CDS 40.0%
GTGTTTGATCTTTGTGGAGT+TGG + chr7.2:19918180-19918199 None:intergenic 40.0%
TCAGAAGATGCCTCAGAAAT+TGG + chr7.2:19918243-19918262 None:intergenic 40.0%
TCCACAAAGATCAAACACTG+TGG - chr7.2:19918182-19918201 MS.gene013948:CDS 40.0%
TGAACAATTCCTTGCCTTCT+TGG - chr7.2:19918001-19918020 MS.gene013948:CDS 40.0%
TGTTCACATGGGAACCAATT+GGG + chr7.2:19917987-19918006 None:intergenic 40.0%
TTGTTCACATGGGAACCAAT+TGG + chr7.2:19917988-19918007 None:intergenic 40.0%
!! AATTTCTGAGGCATCTTCTG+AGG - chr7.2:19918242-19918261 MS.gene013948:CDS 40.0%
!! TATGAATACCCTTGGTAGTG+TGG + chr7.2:19917940-19917959 None:intergenic 40.0%
AAATCCCACTTCCAAACCCT+TGG - chr7.2:19917660-19917679 MS.gene013948:CDS 45.0%
AATTCCTTGCCTTCTTGGCT+TGG - chr7.2:19918006-19918025 MS.gene013948:CDS 45.0%
ACTTCCAAACCCTTGGAGAA+TGG - chr7.2:19917667-19917686 MS.gene013948:CDS 45.0%
AGATGCCTCAGAAATTGGAG+GGG + chr7.2:19918238-19918257 None:intergenic 45.0%
ATATTTCCGTAGTGCTAGCC+TGG - chr7.2:19917957-19917976 MS.gene013948:CDS 45.0%
ATCACAAATCGTGATGCAGG+AGG + chr7.2:19918078-19918097 None:intergenic 45.0%
ATTCTCCAAGGGTTTGGAAG+TGG + chr7.2:19917668-19917687 None:intergenic 45.0%
CAAGTTCAGTTCCTCCTCAT+TGG + chr7.2:19918346-19918365 None:intergenic 45.0%
CAATGAGGAGGAACTGAACT+TGG - chr7.2:19918344-19918363 MS.gene013948:CDS 45.0%
CCCACAGTGTTTGATCTTTG+TGG + chr7.2:19918186-19918205 None:intergenic 45.0%
CCCTTGCAACACCACAATTT+GGG - chr7.2:19918115-19918134 MS.gene013948:CDS 45.0%
GAAGATGCCTCAGAAATTGG+AGG + chr7.2:19918240-19918259 None:intergenic 45.0%
GAATGCTCACCATTCTCCAA+GGG + chr7.2:19917679-19917698 None:intergenic 45.0%
GATTTCTTGACCTTGAGGCT+TGG - chr7.2:19917628-19917647 MS.gene013948:CDS 45.0%
TCAAACCCCTCCAATTTCTG+AGG - chr7.2:19918230-19918249 MS.gene013948:CDS 45.0%
TCCCTTGCAACACCACAATT+TGG - chr7.2:19918114-19918133 MS.gene013948:CDS 45.0%
TGAATGCTCACCATTCTCCA+AGG + chr7.2:19917680-19917699 None:intergenic 45.0%
TTCGGAGCAAGAGTCGAAAT+CGG - chr7.2:19917558-19917577 MS.gene013948:CDS 45.0%
TTCTCCAAGGGTTTGGAAGT+GGG + chr7.2:19917667-19917686 None:intergenic 45.0%
TTGGAGAATGGTGAGCATTC+AGG - chr7.2:19917679-19917698 MS.gene013948:CDS 45.0%
! ATGTGATCGATTCAGCCCTA+AGG - chr7.2:19917869-19917888 MS.gene013948:CDS 45.0%
! GCGCAAAATGATGGAGGATT+CGG - chr7.2:19917540-19917559 MS.gene013948:CDS 45.0%
!! CCCAAATTGTGGTGTTGCAA+GGG + chr7.2:19918118-19918137 None:intergenic 45.0%
!! TCCCAAATTGTGGTGTTGCA+AGG + chr7.2:19918119-19918138 None:intergenic 45.0%
AAGACATCACCACCAACCTC+TGG - chr7.2:19917592-19917611 MS.gene013948:CDS 50.0%
AATTCCTTCACTTGCGGCAC+AGG + chr7.2:19917736-19917755 None:intergenic 50.0%
ATCACCACCAACCTCTGGAT+CGG - chr7.2:19917597-19917616 MS.gene013948:CDS 50.0%
CAAGCTCTCCACACTACCAA+GGG - chr7.2:19917929-19917948 MS.gene013948:CDS 50.0%
CACATGGGAACCAATTGGGT+TGG + chr7.2:19917983-19918002 None:intergenic 50.0%
CATCTTCTGGTGGCTATGGA+GGG - chr7.2:19918034-19918053 MS.gene013948:CDS 50.0%
CCTCAAGCGCAAAATGATGG+AGG - chr7.2:19917534-19917553 MS.gene013948:CDS 50.0%
CTCACCATTCTCCAAGGGTT+TGG + chr7.2:19917674-19917693 None:intergenic 50.0%
CTGGCGATTTCTTGACCTTG+AGG - chr7.2:19917623-19917642 MS.gene013948:CDS 50.0%
GATGAACCACCAAGCCAAGA+AGG + chr7.2:19918018-19918037 None:intergenic 50.0%
GCAAGAGTCGAAATCGGAGA+AGG - chr7.2:19917564-19917583 MS.gene013948:CDS 50.0%
GGCATCACAAATCGTGATGC+AGG + chr7.2:19918081-19918100 None:intergenic 50.0%
GGTTCATCTTCTGGTGGCTA+TGG - chr7.2:19918030-19918049 MS.gene013948:CDS 50.0%
TCAAGCTCTCCACACTACCA+AGG - chr7.2:19917928-19917947 MS.gene013948:CDS 50.0%
TCATCTTCTGGTGGCTATGG+AGG - chr7.2:19918033-19918052 MS.gene013948:CDS 50.0%
TGAGGCTAATCCCAATGAGG+AGG - chr7.2:19918332-19918351 MS.gene013948:CDS 50.0%
TTCTTGACCTTGAGGCTTGG+CGG - chr7.2:19917631-19917650 MS.gene013948:CDS 50.0%
! CCTCCATCATTTTGCGCTTG+AGG + chr7.2:19917537-19917556 None:intergenic 50.0%
! CGTGATGCAGGAGGTGTATT+TGG + chr7.2:19918069-19918088 None:intergenic 50.0%
! CTTGGTGGTTCATCTTCTGG+TGG - chr7.2:19918024-19918043 MS.gene013948:CDS 50.0%
! GCTCACGCTTATGAGCGTTT+TGG + chr7.2:19917813-19917832 None:intergenic 50.0%
!! GAGGTTGGTGGTGATGTCTT+TGG + chr7.2:19917592-19917611 None:intergenic 50.0%
!! TGGCTTGGTGGTTCATCTTC+TGG - chr7.2:19918021-19918040 MS.gene013948:CDS 50.0%
ACCACCAAGCCAAGAAGGCA+AGG + chr7.2:19918013-19918032 None:intergenic 55.0%
CCTCCAAGCGCTTGAGAAGT+GGG + chr7.2:19917787-19917806 None:intergenic 55.0%
CTCCAAGCGCTTGAGAAGTG+GGG + chr7.2:19917786-19917805 None:intergenic 55.0%
TCCTCCAAGCGCTTGAGAAG+TGG + chr7.2:19917788-19917807 None:intergenic 55.0%
TTCCCCACTTCTCAAGCGCT+TGG - chr7.2:19917781-19917800 MS.gene013948:CDS 55.0%
!! TCCTTGCCTTCTTGGCTTGG+TGG - chr7.2:19918009-19918028 MS.gene013948:CDS 55.0%
ATCGCCAGCATCCGATCCAG+AGG + chr7.2:19917611-19917630 None:intergenic 60.0%
CCAACCTCTGGATCGGATGC+TGG - chr7.2:19917604-19917623 MS.gene013948:CDS 60.0%
CCAGCATCCGATCCAGAGGT+TGG + chr7.2:19917607-19917626 None:intergenic 60.0%
CCCACTTCTCAAGCGCTTGG+AGG - chr7.2:19917784-19917803 MS.gene013948:CDS 60.0%
GCATCCGATCCAGAGGTTGG+TGG + chr7.2:19917604-19917623 None:intergenic 60.0%
TCCACCTGTGCCGCAAGTGA+AGG - chr7.2:19917729-19917748 MS.gene013948:CDS 60.0%
TCCTTCACTTGCGGCACAGG+TGG + chr7.2:19917733-19917752 None:intergenic 60.0%
TTCACTTGCGGCACAGGTGG+AGG + chr7.2:19917730-19917749 None:intergenic 60.0%
TTGACCTTGAGGCTTGGCGG+TGG - chr7.2:19917634-19917653 MS.gene013948:CDS 60.0%
! GCTAGCCTGGCCAACCCAAT+TGG - chr7.2:19917970-19917989 MS.gene013948:CDS 60.0%
! GGTTGGCCAGGCTAGCACTA+CGG + chr7.2:19917966-19917985 None:intergenic 60.0%
!! GGGAACCAATTGGGTTGGCC+AGG + chr7.2:19917978-19917997 None:intergenic 60.0%
TGTGCCACCGCCAAGCCTCA+AGG + chr7.2:19917641-19917660 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 19917517 19918380 19917517 ID=MS.gene013948
chr7.2 mRNA 19917517 19918380 19917517 ID=MS.gene013948.t1;Parent=MS.gene013948
chr7.2 exon 19917517 19918380 19917517 ID=MS.gene013948.t1.exon1;Parent=MS.gene013948.t1
chr7.2 CDS 19917517 19918380 19917517 ID=cds.MS.gene013948.t1;Parent=MS.gene013948.t1
Gene Sequence

>MS.gene013948

ATGGCTGAGGACAAAAACCTCAAGCGCAAAATGATGGAGGATTCGGAGCAAGAGTCGAAATCGGAGAAGGAGCCAAAGACATCACCACCAACCTCTGGATCGGATGCTGGCGATTTCTTGACCTTGAGGCTTGGCGGTGGCACAAATCCCACTTCCAAACCCTTGGAGAATGGTGAGCATTCAGGTTCATCTCAAACTGCTAATGTTGAACCTCCACCTGTGCCGCAAGTGAAGGAATTCTCTTGTACTTATTGTGACAAGAAATTCCCCACTTCTCAAGCGCTTGGAGGACACCAAAACGCTCATAAGCGTGAGCGTGTCTTCAAAAAAATGGAAGAACAAAGGAGAGAGGATGTGATCGATTCAGCCCTAAGGTATCGATCAAATATCCTTCCATACCCTTATCAATTTTCAAGCTCTCCACACTACCAAGGGTATTCATATTTCCGTAGTGCTAGCCTGGCCAACCCAATTGGTTCCCATGTGAACAATTCCTTGCCTTCTTGGCTTGGTGGTTCATCTTCTGGTGGCTATGGAGGGATGTATATGCCAAATACACCTCCTGCATCACGATTTGTGATGCCAATGTCAAATTCATCCCTTGCAACACCACAATTTGGGATGAATAATTTATGGGGTGGAGGTCAAAATGCTGCATTACCAACTCCACAAAGATCAAACACTGTGGGTTTGGCACTTTTAGCTCAAGCTAATCAAACCCCTCCAATTTCTGAGGCATCTTCTGAGGCTGTAGAAAGAAATTTCATTGATCAAATTCCTTCTCATGATCCTATTGAAGATGAAGATGACAGAAATGAGGCTAATCCCAATGAGGAGGAACTGAACTTGGAACTCACCCTTTAA
Protein sequence

>MS.gene013948.t1

MAEDKNLKRKMMEDSEQESKSEKEPKTSPPTSGSDAGDFLTLRLGGGTNPTSKPLENGEHSGSSQTANVEPPPVPQVKEFSCTYCDKKFPTSQALGGHQNAHKRERVFKKMEEQRREDVIDSALRYRSNILPYPYQFSSSPHYQGYSYFRSASLANPIGSHVNNSLPSWLGGSSSGGYGGMYMPNTPPASRFVMPMSNSSLATPQFGMNNLWGGGQNAALPTPQRSNTVGLALLAQANQTPPISEASSEAVERNFIDQIPSHDPIEDEDDRNEANPNEEELNLELTL