Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013976.t1 | ABN08552.1 | 96.7 | 454 | 13 | 1 | 1 | 454 | 1 | 452 | 2.40E-250 | 874.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013976.t1 | Q9FF61 | 57.7 | 489 | 157 | 7 | 1 | 454 | 42 | 515 | 2.2e-148 | 526.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013976.t1 | G7L5V8 | 96.7 | 454 | 13 | 1 | 1 | 454 | 1 | 452 | 1.7e-250 | 874.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene013976.t1 | TR | SNF2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013976.t1 | MTR_7g089190 | 96.696 | 454 | 13 | 1 | 1 | 454 | 1 | 452 | 0.0 | 920 |
MS.gene013976.t1 | MTR_1g044120 | 34.629 | 283 | 156 | 6 | 195 | 449 | 463 | 744 | 1.34e-44 | 167 |
MS.gene013976.t1 | MTR_2g084630 | 26.994 | 489 | 266 | 12 | 53 | 453 | 158 | 643 | 1.61e-43 | 164 |
MS.gene013976.t1 | MTR_2g084630 | 27.235 | 481 | 269 | 11 | 53 | 453 | 158 | 637 | 1.82e-43 | 164 |
MS.gene013976.t1 | MTR_2g012830 | 27.374 | 358 | 143 | 8 | 188 | 454 | 536 | 867 | 3.50e-35 | 140 |
MS.gene013976.t1 | MTR_5g067980 | 32.768 | 177 | 91 | 4 | 296 | 444 | 487 | 663 | 1.21e-20 | 96.3 |
MS.gene013976.t1 | MTR_4g118845 | 31.868 | 182 | 96 | 6 | 253 | 428 | 209 | 368 | 1.55e-18 | 89.4 |
MS.gene013976.t1 | MTR_4g118845 | 31.868 | 182 | 96 | 6 | 253 | 428 | 22 | 181 | 1.70e-18 | 89.0 |
MS.gene013976.t1 | MTR_4g078460 | 24.074 | 270 | 163 | 7 | 191 | 458 | 405 | 634 | 2.22e-17 | 85.5 |
MS.gene013976.t1 | MTR_4g078460 | 24.074 | 270 | 163 | 7 | 191 | 458 | 405 | 634 | 2.44e-17 | 85.5 |
MS.gene013976.t1 | MTR_2g020000 | 30.939 | 181 | 99 | 5 | 253 | 428 | 212 | 371 | 2.75e-17 | 85.5 |
MS.gene013976.t1 | MTR_4g078495 | 25.185 | 270 | 160 | 9 | 191 | 458 | 119 | 348 | 2.86e-17 | 85.1 |
MS.gene013976.t1 | MTR_4g035100 | 29.534 | 193 | 117 | 5 | 253 | 441 | 1471 | 1648 | 4.70e-17 | 85.1 |
MS.gene013976.t1 | MTR_4g035100 | 29.534 | 193 | 117 | 5 | 253 | 441 | 1471 | 1648 | 4.87e-17 | 85.1 |
MS.gene013976.t1 | MTR_1g115215 | 38.889 | 90 | 55 | 0 | 365 | 454 | 522 | 611 | 2.38e-16 | 82.4 |
MS.gene013976.t1 | MTR_1g053955 | 32.955 | 176 | 90 | 7 | 253 | 422 | 542 | 695 | 7.29e-16 | 81.3 |
MS.gene013976.t1 | MTR_1g035330 | 27.041 | 196 | 106 | 6 | 250 | 428 | 214 | 389 | 4.27e-15 | 78.2 |
MS.gene013976.t1 | MTR_4g049500 | 31.667 | 120 | 78 | 1 | 252 | 367 | 260 | 379 | 7.87e-15 | 77.8 |
MS.gene013976.t1 | MTR_4g049500 | 47.458 | 59 | 31 | 0 | 370 | 428 | 455 | 513 | 2.95e-11 | 66.2 |
MS.gene013976.t1 | MTR_7g090960 | 28.804 | 184 | 93 | 6 | 253 | 422 | 599 | 758 | 1.30e-14 | 77.0 |
MS.gene013976.t1 | MTR_7g090960 | 28.804 | 184 | 93 | 6 | 253 | 422 | 518 | 677 | 1.36e-14 | 77.0 |
MS.gene013976.t1 | MTR_5g005840 | 28.378 | 222 | 126 | 7 | 253 | 468 | 384 | 578 | 7.77e-14 | 74.7 |
MS.gene013976.t1 | MTR_5g020000 | 26.738 | 187 | 102 | 6 | 253 | 428 | 205 | 367 | 9.36e-14 | 74.3 |
MS.gene013976.t1 | MTR_4g118720 | 28.111 | 217 | 130 | 7 | 253 | 463 | 1026 | 1222 | 1.03e-13 | 74.3 |
MS.gene013976.t1 | MTR_3g053910 | 28.421 | 190 | 101 | 5 | 254 | 430 | 622 | 789 | 1.79e-13 | 73.6 |
MS.gene013976.t1 | MTR_3g053910 | 28.421 | 190 | 101 | 5 | 254 | 430 | 593 | 760 | 1.80e-13 | 73.6 |
MS.gene013976.t1 | MTR_5g090090 | 27.083 | 192 | 101 | 6 | 254 | 431 | 639 | 805 | 7.21e-13 | 71.6 |
MS.gene013976.t1 | MTR_5g090090 | 27.083 | 192 | 101 | 6 | 254 | 431 | 639 | 805 | 7.27e-13 | 71.6 |
MS.gene013976.t1 | MTR_7g039320 | 26.531 | 245 | 102 | 11 | 199 | 421 | 35 | 223 | 1.02e-11 | 67.8 |
MS.gene013976.t1 | MTR_7g039320 | 26.531 | 245 | 102 | 11 | 199 | 421 | 35 | 223 | 1.03e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013976.t1 | AT5G05130 | 56.646 | 489 | 162 | 7 | 1 | 454 | 42 | 515 | 0.0 | 538 |
MS.gene013976.t1 | AT5G22750 | 35.738 | 305 | 144 | 6 | 201 | 453 | 346 | 650 | 9.81e-45 | 168 |
MS.gene013976.t1 | AT5G43530 | 33.670 | 297 | 163 | 9 | 190 | 453 | 604 | 899 | 1.27e-43 | 165 |
MS.gene013976.t1 | AT3G16600 | 31.338 | 284 | 138 | 5 | 195 | 453 | 45 | 296 | 6.94e-40 | 152 |
MS.gene013976.t1 | AT1G11100 | 31.633 | 294 | 142 | 8 | 193 | 454 | 389 | 655 | 5.25e-37 | 145 |
MS.gene013976.t1 | AT1G11100 | 31.561 | 301 | 133 | 8 | 193 | 454 | 532 | 798 | 6.29e-37 | 145 |
MS.gene013976.t1 | AT1G61140 | 27.143 | 350 | 139 | 7 | 195 | 454 | 390 | 713 | 4.90e-34 | 136 |
MS.gene013976.t1 | AT1G61140 | 27.143 | 350 | 139 | 7 | 195 | 454 | 555 | 878 | 5.61e-34 | 136 |
MS.gene013976.t1 | AT1G61140 | 27.143 | 350 | 139 | 7 | 195 | 454 | 548 | 871 | 6.08e-34 | 136 |
MS.gene013976.t1 | AT1G02670 | 37.433 | 187 | 97 | 4 | 250 | 428 | 142 | 316 | 8.58e-33 | 130 |
MS.gene013976.t1 | AT1G02670 | 37.433 | 187 | 97 | 4 | 250 | 428 | 115 | 289 | 1.43e-32 | 131 |
MS.gene013976.t1 | AT1G02670 | 37.433 | 187 | 97 | 4 | 250 | 428 | 115 | 289 | 1.78e-32 | 131 |
MS.gene013976.t1 | AT1G02670 | 37.433 | 187 | 97 | 4 | 250 | 428 | 142 | 316 | 2.34e-32 | 130 |
MS.gene013976.t1 | AT1G02670 | 37.433 | 187 | 97 | 4 | 250 | 428 | 142 | 316 | 2.56e-32 | 130 |
MS.gene013976.t1 | AT1G11100 | 27.826 | 345 | 132 | 8 | 193 | 454 | 531 | 841 | 5.59e-32 | 130 |
MS.gene013976.t1 | AT1G11100 | 27.826 | 345 | 132 | 8 | 193 | 454 | 532 | 842 | 5.75e-32 | 130 |
MS.gene013976.t1 | AT1G02670 | 37.705 | 183 | 92 | 5 | 252 | 424 | 144 | 314 | 3.40e-30 | 124 |
MS.gene013976.t1 | AT1G02670 | 37.297 | 185 | 94 | 5 | 250 | 424 | 153 | 325 | 3.82e-30 | 124 |
MS.gene013976.t1 | AT2G40770 | 32.597 | 181 | 95 | 3 | 296 | 449 | 499 | 679 | 1.71e-23 | 105 |
MS.gene013976.t1 | AT2G40770 | 32.597 | 181 | 95 | 3 | 296 | 449 | 499 | 679 | 1.71e-23 | 105 |
MS.gene013976.t1 | AT2G40770 | 32.597 | 181 | 95 | 3 | 296 | 449 | 499 | 679 | 1.71e-23 | 105 |
MS.gene013976.t1 | AT1G03750 | 25.490 | 255 | 147 | 7 | 195 | 447 | 132 | 345 | 2.07e-19 | 92.0 |
MS.gene013976.t1 | AT3G54280 | 29.319 | 191 | 120 | 4 | 253 | 441 | 1503 | 1680 | 4.60e-19 | 91.3 |
MS.gene013976.t1 | AT3G54280 | 29.319 | 191 | 120 | 4 | 253 | 441 | 1472 | 1649 | 5.04e-19 | 91.3 |
MS.gene013976.t1 | AT3G20010 | 42.222 | 90 | 52 | 0 | 364 | 453 | 245 | 334 | 1.53e-18 | 89.4 |
MS.gene013976.t1 | AT3G20010 | 42.222 | 90 | 52 | 0 | 364 | 453 | 270 | 359 | 1.74e-18 | 89.0 |
MS.gene013976.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.15e-18 | 88.6 |
MS.gene013976.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.15e-18 | 88.6 |
MS.gene013976.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.15e-18 | 88.6 |
MS.gene013976.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.55e-18 | 88.2 |
MS.gene013976.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.55e-18 | 88.2 |
MS.gene013976.t1 | AT3G20010 | 41.758 | 91 | 53 | 0 | 364 | 454 | 536 | 626 | 3.55e-18 | 88.2 |
MS.gene013976.t1 | AT1G05120 | 30.769 | 182 | 82 | 5 | 187 | 366 | 167 | 306 | 5.32e-18 | 87.8 |
MS.gene013976.t1 | AT1G05120 | 49.180 | 61 | 31 | 0 | 368 | 428 | 395 | 455 | 3.88e-12 | 69.3 |
MS.gene013976.t1 | AT1G05120 | 30.769 | 182 | 82 | 5 | 187 | 366 | 124 | 263 | 5.75e-18 | 87.4 |
MS.gene013976.t1 | AT1G05120 | 50.847 | 59 | 29 | 0 | 370 | 428 | 354 | 412 | 3.67e-12 | 69.3 |
MS.gene013976.t1 | AT5G18620 | 32.967 | 182 | 94 | 7 | 253 | 428 | 215 | 374 | 3.60e-17 | 85.1 |
MS.gene013976.t1 | AT5G18620 | 32.967 | 182 | 94 | 7 | 253 | 428 | 215 | 374 | 3.83e-17 | 85.1 |
MS.gene013976.t1 | AT3G06400 | 32.418 | 182 | 95 | 7 | 253 | 428 | 210 | 369 | 8.83e-17 | 84.0 |
MS.gene013976.t1 | AT3G06400 | 32.418 | 182 | 95 | 7 | 253 | 428 | 210 | 369 | 8.83e-17 | 84.0 |
MS.gene013976.t1 | AT3G06400 | 32.418 | 182 | 95 | 7 | 253 | 428 | 210 | 369 | 8.90e-17 | 84.0 |
MS.gene013976.t1 | AT1G50410 | 40.000 | 90 | 54 | 0 | 365 | 454 | 466 | 555 | 2.27e-16 | 82.4 |
MS.gene013976.t1 | AT1G50410 | 27.652 | 264 | 101 | 9 | 195 | 406 | 218 | 443 | 2.57e-16 | 82.4 |
MS.gene013976.t1 | AT1G50410 | 40.000 | 90 | 54 | 0 | 365 | 454 | 466 | 555 | 2.56e-16 | 82.4 |
MS.gene013976.t1 | AT1G50410 | 27.652 | 264 | 101 | 9 | 195 | 406 | 218 | 443 | 3.65e-16 | 82.0 |
MS.gene013976.t1 | AT1G50410 | 40.000 | 90 | 54 | 0 | 365 | 454 | 466 | 555 | 2.56e-16 | 82.4 |
MS.gene013976.t1 | AT1G50410 | 27.652 | 264 | 101 | 9 | 195 | 406 | 218 | 443 | 3.65e-16 | 82.0 |
MS.gene013976.t1 | AT1G50410 | 40.000 | 90 | 54 | 0 | 365 | 454 | 466 | 555 | 2.56e-16 | 82.4 |
MS.gene013976.t1 | AT1G50410 | 27.652 | 264 | 101 | 9 | 195 | 406 | 218 | 443 | 3.65e-16 | 82.0 |
MS.gene013976.t1 | AT3G12810 | 31.818 | 176 | 92 | 6 | 253 | 422 | 553 | 706 | 5.62e-16 | 81.6 |
MS.gene013976.t1 | AT3G12810 | 31.818 | 176 | 92 | 6 | 253 | 422 | 557 | 710 | 5.67e-16 | 81.6 |
MS.gene013976.t1 | AT1G11100 | 39.560 | 91 | 55 | 0 | 364 | 454 | 609 | 699 | 2.70e-15 | 79.3 |
MS.gene013976.t1 | AT2G02090 | 27.461 | 193 | 109 | 6 | 250 | 428 | 232 | 407 | 1.49e-14 | 76.6 |
MS.gene013976.t1 | AT3G54460 | 27.950 | 161 | 108 | 4 | 296 | 448 | 456 | 616 | 1.60e-14 | 77.0 |
MS.gene013976.t1 | AT3G54460 | 27.950 | 161 | 108 | 4 | 296 | 448 | 753 | 913 | 1.72e-14 | 77.0 |
MS.gene013976.t1 | AT2G28290 | 29.060 | 234 | 111 | 9 | 195 | 422 | 746 | 930 | 4.45e-14 | 75.9 |
MS.gene013976.t1 | AT2G28290 | 29.060 | 234 | 111 | 9 | 195 | 422 | 747 | 931 | 4.45e-14 | 75.9 |
MS.gene013976.t1 | AT2G28290 | 29.060 | 234 | 111 | 9 | 195 | 422 | 746 | 930 | 4.53e-14 | 75.9 |
MS.gene013976.t1 | AT2G28290 | 29.060 | 234 | 111 | 9 | 195 | 422 | 747 | 931 | 4.90e-14 | 75.5 |
MS.gene013976.t1 | AT2G28290 | 29.060 | 234 | 111 | 9 | 195 | 422 | 746 | 930 | 5.03e-14 | 75.5 |
MS.gene013976.t1 | AT2G28290 | 29.060 | 234 | 111 | 9 | 195 | 422 | 746 | 930 | 5.03e-14 | 75.5 |
MS.gene013976.t1 | AT3G06010 | 27.074 | 229 | 120 | 9 | 253 | 468 | 424 | 618 | 4.74e-13 | 72.0 |
MS.gene013976.t1 | AT5G66750 | 27.551 | 196 | 103 | 8 | 253 | 435 | 223 | 392 | 3.09e-12 | 69.3 |
MS.gene013976.t1 | AT3G57300 | 26.087 | 184 | 98 | 6 | 253 | 422 | 607 | 766 | 4.32e-12 | 69.3 |
MS.gene013976.t1 | AT4G31900 | 28.095 | 210 | 111 | 7 | 254 | 453 | 206 | 385 | 5.36e-12 | 68.9 |
MS.gene013976.t1 | AT4G31900 | 28.095 | 210 | 111 | 7 | 254 | 453 | 247 | 426 | 5.69e-12 | 68.9 |
MS.gene013976.t1 | AT3G57300 | 26.087 | 184 | 98 | 6 | 253 | 422 | 607 | 766 | 5.81e-12 | 68.9 |
MS.gene013976.t1 | AT3G57300 | 26.087 | 184 | 98 | 6 | 253 | 422 | 607 | 766 | 5.81e-12 | 68.9 |
MS.gene013976.t1 | AT4G31900 | 28.095 | 210 | 111 | 7 | 254 | 453 | 247 | 426 | 5.86e-12 | 68.9 |
MS.gene013976.t1 | AT2G13370 | 26.178 | 191 | 104 | 5 | 254 | 430 | 647 | 814 | 1.00e-11 | 68.2 |
MS.gene013976.t1 | AT2G13370 | 26.178 | 191 | 104 | 5 | 254 | 430 | 647 | 814 | 1.00e-11 | 68.2 |
MS.gene013976.t1 | AT2G13370 | 26.178 | 191 | 104 | 5 | 254 | 430 | 647 | 814 | 1.00e-11 | 68.2 |
MS.gene013976.t1 | AT5G19310 | 26.126 | 222 | 130 | 8 | 253 | 468 | 143 | 336 | 1.24e-11 | 67.4 |
MS.gene013976.t1 | AT5G19310 | 26.126 | 222 | 130 | 8 | 253 | 468 | 407 | 600 | 1.58e-11 | 67.4 |
MS.gene013976.t1 | AT2G44980 | 28.729 | 181 | 91 | 8 | 257 | 421 | 77 | 235 | 2.26e-11 | 66.6 |
Find 131 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAAGGTTTATATGTATTA+TGG | 0.243058 | 7.2:+19310633 | MS.gene013976:CDS |
TTTGCGGACGGGATGGGATT+AGG | 0.262324 | 7.2:+19310426 | MS.gene013976:CDS |
CTGATGATTTACCGCCGTTT+TGG | 0.262594 | 7.2:+19310322 | MS.gene013976:CDS |
GGATACTCCTGTGAAGAAAT+TGG | 0.280994 | 7.2:+19310746 | MS.gene013976:CDS |
TTGGAGTCGTATGGGTTTAA+AGG | 0.302377 | 7.2:-19309802 | None:intergenic |
GAAACCGGCGAGGTAGGTTT+CGG | 0.351950 | 7.2:-19309701 | None:intergenic |
TTGCGGACGGGATGGGATTA+GGG | 0.354547 | 7.2:+19310427 | MS.gene013976:CDS |
GATACTCCTGTGAAGAAATT+GGG | 0.364943 | 7.2:+19310747 | MS.gene013976:CDS |
GGTAGGTTTCGGATTGGGAT+TGG | 0.365722 | 7.2:-19309690 | None:intergenic |
CGAGTTTGAAAATTTGATCT+AGG | 0.366948 | 7.2:-19310173 | None:intergenic |
CGGTTCAGAAACTAGGGTTT+TGG | 0.367071 | 7.2:-19310214 | None:intergenic |
TTTATATGTATTATGGTGAT+AGG | 0.371908 | 7.2:+19310640 | MS.gene013976:CDS |
GATAAAATGAAAATGAAAAG+TGG | 0.372811 | 7.2:+19310483 | MS.gene013976:CDS |
TGCGCGGCCGGAGCCTCTCT+CGG | 0.374792 | 7.2:+19310395 | MS.gene013976:CDS |
GGGGTGGAGGAGGATTGTTT+TGG | 0.395962 | 7.2:+19310767 | MS.gene013976:CDS |
GTAGGTTTCGGATTGGGATT+GGG | 0.396664 | 7.2:-19309689 | None:intergenic |
TGTTAATGCGGGACAGAGTC+AGG | 0.398787 | 7.2:+19310812 | MS.gene013976:CDS |
AGGAGCGAGAGCGGCGGCGA+CGG | 0.400378 | 7.2:-19309878 | None:intergenic |
GGCGAGGTAGGTTTCGGATT+GGG | 0.403200 | 7.2:-19309695 | None:intergenic |
AAGAGGAGATGGGCTGTTAC+GGG | 0.409943 | 7.2:+19310855 | MS.gene013976:CDS |
TTCGACATGGATAACTCAAT+TGG | 0.410437 | 7.2:+19310587 | MS.gene013976:CDS |
GGTTTAACGGTTCAGAAACT+AGG | 0.413284 | 7.2:-19310221 | None:intergenic |
GTCAGCGCGTGTTTCTTTAA+CGG | 0.413934 | 7.2:-19310103 | None:intergenic |
GGGAGCTGAGTTGCGGTGTT+CGG | 0.416851 | 7.2:+19310725 | MS.gene013976:CDS |
ATTATTATTACCGGTTGTTA+CGG | 0.427981 | 7.2:-19310142 | None:intergenic |
TTCGGATTGGGATTGGGAGA+AGG | 0.428738 | 7.2:-19309683 | None:intergenic |
TCATAAGAACCATTCTGAAT+AGG | 0.433793 | 7.2:-19310882 | None:intergenic |
GACCGGGATGAGTCGATTGC+AGG | 0.436131 | 7.2:+19311001 | MS.gene013976:CDS |
ATGCTAGAAGGAGGGTTTAA+CGG | 0.438865 | 7.2:-19310234 | None:intergenic |
TTAACGTTGCTATCGTTGAT+TGG | 0.448424 | 7.2:+19310456 | MS.gene013976:CDS |
GAAGAGGAGATGGGCTGTTA+CGG | 0.450082 | 7.2:+19310854 | MS.gene013976:CDS |
TTGATGGCGTTGGAGTCGTA+TGG | 0.450151 | 7.2:-19309811 | None:intergenic |
CTTTGAATGCGAAGAGGAGA+TGG | 0.451636 | 7.2:+19310844 | MS.gene013976:CDS |
TCTGATTTAATAATGCTAGA+AGG | 0.452942 | 7.2:-19310246 | None:intergenic |
ATCCCTCCCGAGAGAGGCTC+CGG | 0.453624 | 7.2:-19310402 | None:intergenic |
CAATAACTCTTAATAGAAAA+CGG | 0.456175 | 7.2:-19310939 | None:intergenic |
GATGTTGGCCATTACGAAAC+CGG | 0.457398 | 7.2:-19309716 | None:intergenic |
GCGCGGCCGGAGCCTCTCTC+GGG | 0.458130 | 7.2:+19310396 | MS.gene013976:CDS |
GTTCAGCAACCTCTTAATCA+AGG | 0.458966 | 7.2:+19310972 | MS.gene013976:CDS |
GGGATATTTGCGGACGGGAT+GGG | 0.460336 | 7.2:+19310420 | MS.gene013976:CDS |
TTGAGTGTTGAGGACTTTGA+TGG | 0.469309 | 7.2:-19309827 | None:intergenic |
CTCCACCCCAATTTCTTCAC+AGG | 0.470263 | 7.2:-19310753 | None:intergenic |
CACTACTCCGGCACCATCAC+CGG | 0.474897 | 7.2:+19309751 | MS.gene013976:CDS |
TAGGGGTAGTGTAGAGAGGG+TGG | 0.476445 | 7.2:+19310518 | MS.gene013976:CDS |
GAGGATTTCGCGGCCGGTGA+TGG | 0.480465 | 7.2:-19309764 | None:intergenic |
TCGGATTGGGATTGGGAGAA+GGG | 0.481945 | 7.2:-19309682 | None:intergenic |
TAAGCCGAGGATTTCGCGGC+CGG | 0.485440 | 7.2:-19309770 | None:intergenic |
CCCTCTTTCTCCTCCCAAAA+CGG | 0.487569 | 7.2:-19310336 | None:intergenic |
TTCGCGGCCGGTGATGGTGC+CGG | 0.488545 | 7.2:-19309758 | None:intergenic |
TACTAACCGTGGCACGTTGA+AGG | 0.489496 | 7.2:+19310617 | MS.gene013976:CDS |
CTCAAGATGCTGAGGAGTTG+AGG | 0.490043 | 7.2:+19310667 | MS.gene013976:CDS |
TAAGAGTTATTGGCAAAGCT+TGG | 0.490157 | 7.2:+19310950 | MS.gene013976:CDS |
TTGACTACTTATGCTACATT+GGG | 0.494687 | 7.2:+19310705 | MS.gene013976:CDS |
GTTGAGGACTTTGATGGCGT+TGG | 0.504215 | 7.2:-19309821 | None:intergenic |
CGGCGAGGTAGGTTTCGGAT+TGG | 0.508795 | 7.2:-19309696 | None:intergenic |
GTTGACTACTTATGCTACAT+TGG | 0.511870 | 7.2:+19310704 | MS.gene013976:CDS |
GGATTAAGCCGAGGATTTCG+CGG | 0.515048 | 7.2:-19309774 | None:intergenic |
CTACCTCGCCGGTTTCGTAA+TGG | 0.515519 | 7.2:+19309708 | MS.gene013976:CDS |
AGTGGGAAGAAAAGAGGTAG+GGG | 0.516027 | 7.2:+19310501 | MS.gene013976:CDS |
AGCGCTGATTCCGTAACAAC+CGG | 0.516462 | 7.2:+19310132 | MS.gene013976:CDS |
CGCGTTCGATGTAACCGACT+TGG | 0.516483 | 7.2:-19309855 | None:intergenic |
AAGTGGGAAGAAAAGAGGTA+GGG | 0.519183 | 7.2:+19310500 | MS.gene013976:CDS |
AGGGATATTTGCGGACGGGA+TGG | 0.519906 | 7.2:+19310419 | MS.gene013976:CDS |
TGATGGCGTTGGAGTCGTAT+GGG | 0.521093 | 7.2:-19309810 | None:intergenic |
TGAAGAAATTGGGGTGGAGG+AGG | 0.522236 | 7.2:+19310757 | MS.gene013976:CDS |
CGGCCGGAGCCTCTCTCGGG+AGG | 0.523817 | 7.2:+19310399 | MS.gene013976:CDS |
ATAAAATGAAAATGAAAAGT+GGG | 0.525475 | 7.2:+19310484 | MS.gene013976:CDS |
ATGAAAAGTGGGAAGAAAAG+AGG | 0.526742 | 7.2:+19310495 | MS.gene013976:CDS |
TATGAATCTGACAAGGGATA+CGG | 0.528146 | 7.2:-19309972 | None:intergenic |
ATCACCGGCCGCGAAATCCT+CGG | 0.528188 | 7.2:+19309766 | MS.gene013976:CDS |
CTGTGAAGAAATTGGGGTGG+AGG | 0.528357 | 7.2:+19310754 | MS.gene013976:CDS |
GTCGAGGAGAGGAGCGAGAG+CGG | 0.529382 | 7.2:-19309887 | None:intergenic |
TTCGTAATGGCCAACATCGT+CGG | 0.530765 | 7.2:+19309721 | MS.gene013976:CDS |
CTCCTTCTGTGATTTCGACA+TGG | 0.531528 | 7.2:+19310574 | MS.gene013976:CDS |
GCGTGTTTCTTTAACGGCGG+CGG | 0.532351 | 7.2:-19310097 | None:intergenic |
CTTGGAGTGTTTGAGTGTTG+AGG | 0.532776 | 7.2:-19309837 | None:intergenic |
TTATCAAACTAATGCGCGGC+CGG | 0.540005 | 7.2:+19310383 | MS.gene013976:CDS |
AGGTAGGGGTAGTGTAGAGA+GGG | 0.545313 | 7.2:+19310515 | MS.gene013976:CDS |
ATACGAAATGAAATGAACAT+TGG | 0.545733 | 7.2:-19310046 | None:intergenic |
GTGTTTAATGCCGACGATGT+TGG | 0.546373 | 7.2:-19309731 | None:intergenic |
GAGGTAGGGGTAGTGTAGAG+AGG | 0.546579 | 7.2:+19310514 | MS.gene013976:CDS |
AAAGTGGGAAGAAAAGAGGT+AGG | 0.547195 | 7.2:+19310499 | MS.gene013976:CDS |
GTTTAACGGTTCAGAAACTA+GGG | 0.551674 | 7.2:-19310220 | None:intergenic |
GGCCGGAGCCTCTCTCGGGA+GGG | 0.552185 | 7.2:+19310400 | MS.gene013976:CDS |
CGTATGGGTTTAAAGGTTCG+CGG | 0.555958 | 7.2:-19309795 | None:intergenic |
CTTAATCAAGGAAAACAGAC+CGG | 0.556797 | 7.2:+19310984 | MS.gene013976:CDS |
TACCTGCAATCGACTCATCC+CGG | 0.558747 | 7.2:-19311003 | None:intergenic |
CATTACGAAACCGGCGAGGT+AGG | 0.559895 | 7.2:-19309707 | None:intergenic |
GCAAATATCCCTCCCGAGAG+AGG | 0.560537 | 7.2:-19310408 | None:intergenic |
GGGTTCTTGTGAGTCTTCCA+TGG | 0.560574 | 7.2:-19309662 | None:intergenic |
ACGGGGACGCCTATTCAGAA+TGG | 0.563434 | 7.2:+19310873 | MS.gene013976:CDS |
GACATGGATAACTCAATTGG+AGG | 0.564551 | 7.2:+19310590 | MS.gene013976:CDS |
AGCGCGTGTTTCTTTAACGG+CGG | 0.569465 | 7.2:-19310100 | None:intergenic |
GCGAGTGTTGGTTTGAACGA+TGG | 0.569836 | 7.2:-19309932 | None:intergenic |
ATTTAATAATGCTAGAAGGA+GGG | 0.574890 | 7.2:-19310242 | None:intergenic |
GATTTAATAATGCTAGAAGG+AGG | 0.575245 | 7.2:-19310243 | None:intergenic |
CGGGAGGGATATTTGCGGAC+GGG | 0.579950 | 7.2:+19310415 | MS.gene013976:CDS |
GAGGAGAGGAGCGAGAGCGG+CGG | 0.582518 | 7.2:-19309884 | None:intergenic |
GTTATTGTTAGAGCGAGTGT+TGG | 0.586502 | 7.2:-19309944 | None:intergenic |
GAATGAGAAAGAGTAAAAGA+AGG | 0.587449 | 7.2:-19310075 | None:intergenic |
ATATGTATTATGGTGATAGG+AGG | 0.588645 | 7.2:+19310643 | MS.gene013976:CDS |
ACGATCAAGAATGTTAATGC+GGG | 0.594066 | 7.2:+19310801 | MS.gene013976:CDS |
AGGGTGGAGAGTGAGACAAA+TGG | 0.602442 | 7.2:+19310534 | MS.gene013976:CDS |
TATAAACCTTCAACGTGCCA+CGG | 0.606128 | 7.2:-19310623 | None:intergenic |
TGTTACGGAATCAGCGCTGA+CGG | 0.607869 | 7.2:-19310127 | None:intergenic |
ATGATATGAGCGTCGAGGAG+AGG | 0.615397 | 7.2:-19309898 | None:intergenic |
ATCCATGTCGAAATCACAGA+AGG | 0.617581 | 7.2:-19310576 | None:intergenic |
TTTGAATGCGAAGAGGAGAT+GGG | 0.618382 | 7.2:+19310845 | MS.gene013976:CDS |
GCGAAGATATGAATCTGACA+AGG | 0.618949 | 7.2:-19309979 | None:intergenic |
TTAATCAAGGAAAACAGACC+GGG | 0.621325 | 7.2:+19310985 | MS.gene013976:CDS |
CAATCCGAAACCTACCTCGC+CGG | 0.623218 | 7.2:+19309697 | MS.gene013976:CDS |
ATACTCCTGTGAAGAAATTG+GGG | 0.629443 | 7.2:+19310748 | MS.gene013976:CDS |
CTCCTGTGAAGAAATTGGGG+TGG | 0.632108 | 7.2:+19310751 | MS.gene013976:CDS |
TCTCTCGGGAGGGATATTTG+CGG | 0.634363 | 7.2:+19310410 | MS.gene013976:CDS |
TCGGGAGGGATATTTGCGGA+CGG | 0.634657 | 7.2:+19310414 | MS.gene013976:CDS |
TACGATCAAGAATGTTAATG+CGG | 0.642076 | 7.2:+19310800 | MS.gene013976:CDS |
TAGGAGGACTCAAGATGCTG+AGG | 0.643252 | 7.2:+19310659 | MS.gene013976:CDS |
CTACATTGGGAGCTGAGTTG+CGG | 0.644145 | 7.2:+19310718 | MS.gene013976:CDS |
AGAGGAGATGGGCTGTTACG+GGG | 0.645108 | 7.2:+19310856 | MS.gene013976:CDS |
GTCGGCATTAAACACTACTC+CGG | 0.651569 | 7.2:+19309739 | MS.gene013976:CDS |
AAGGTTCGCGGATTAAGCCG+AGG | 0.655327 | 7.2:-19309783 | None:intergenic |
AACACTCAAACACTCCAAGT+CGG | 0.656074 | 7.2:+19309841 | MS.gene013976:CDS |
CATGTCGAAATCACAGAAGG+AGG | 0.664824 | 7.2:-19310573 | None:intergenic |
CGAAGATATGAATCTGACAA+GGG | 0.668320 | 7.2:-19309978 | None:intergenic |
TTTGAACGATGGCTTCGACG+TGG | 0.670822 | 7.2:-19309921 | None:intergenic |
TGATTGCTTTGAATGCGAAG+AGG | 0.688442 | 7.2:+19310838 | MS.gene013976:CDS |
TTGGAGGAACATACTAACCG+TGG | 0.701328 | 7.2:+19310606 | MS.gene013976:CDS |
TGGCCATTACGAAACCGGCG+AGG | 0.702379 | 7.2:-19309711 | None:intergenic |
CGAATTATCAAACTAATGCG+CGG | 0.709330 | 7.2:+19310379 | MS.gene013976:CDS |
TCTTTCTCCTCCCAAAACGG+CGG | 0.713897 | 7.2:-19310333 | None:intergenic |
CGTGGATGATATGAGCGTCG+AGG | 0.719430 | 7.2:-19309903 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATGAAAATGAAAAGT+GGG | + | chr7.2:19310484-19310503 | MS.gene013976:CDS | 15.0% |
!!! | GTTTTTACTATTATTATTAC+CGG | - | chr7.2:19310154-19310173 | None:intergenic | 15.0% |
!! | CAATAACTCTTAATAGAAAA+CGG | - | chr7.2:19310942-19310961 | None:intergenic | 20.0% |
!! | GATAAAATGAAAATGAAAAG+TGG | + | chr7.2:19310483-19310502 | MS.gene013976:CDS | 20.0% |
!! | TTGAAGGTTTATATGTATTA+TGG | + | chr7.2:19310633-19310652 | MS.gene013976:CDS | 20.0% |
!! | TTTATATGTATTATGGTGAT+AGG | + | chr7.2:19310640-19310659 | MS.gene013976:CDS | 20.0% |
! | ATACGAAATGAAATGAACAT+TGG | - | chr7.2:19310049-19310068 | None:intergenic | 25.0% |
! | ATTTAATAATGCTAGAAGGA+GGG | - | chr7.2:19310245-19310264 | None:intergenic | 25.0% |
! | TCTGATTTAATAATGCTAGA+AGG | - | chr7.2:19310249-19310268 | None:intergenic | 25.0% |
!! | ATTATTATTACCGGTTGTTA+CGG | - | chr7.2:19310145-19310164 | None:intergenic | 25.0% |
!! | CGTTTTCTATTAAGAGTTAT+TGG | + | chr7.2:19310940-19310959 | MS.gene013976:CDS | 25.0% |
!!! | TTATGACTTGTTTTCTCTTA+TGG | + | chr7.2:19310899-19310918 | MS.gene013976:CDS | 25.0% |
ATATGTATTATGGTGATAGG+AGG | + | chr7.2:19310643-19310662 | MS.gene013976:CDS | 30.0% | |
CGAGTTTGAAAATTTGATCT+AGG | - | chr7.2:19310176-19310195 | None:intergenic | 30.0% | |
GAATGAGAAAGAGTAAAAGA+AGG | - | chr7.2:19310078-19310097 | None:intergenic | 30.0% | |
GATTTAATAATGCTAGAAGG+AGG | - | chr7.2:19310246-19310265 | None:intergenic | 30.0% | |
TACGATCAAGAATGTTAATG+CGG | + | chr7.2:19310800-19310819 | MS.gene013976:CDS | 30.0% | |
TCATAAGAACCATTCTGAAT+AGG | - | chr7.2:19310885-19310904 | None:intergenic | 30.0% | |
TTGACTACTTATGCTACATT+GGG | + | chr7.2:19310705-19310724 | MS.gene013976:CDS | 30.0% | |
ACGATCAAGAATGTTAATGC+GGG | + | chr7.2:19310801-19310820 | MS.gene013976:CDS | 35.0% | |
ATACTCCTGTGAAGAAATTG+GGG | + | chr7.2:19310748-19310767 | MS.gene013976:CDS | 35.0% | |
ATGAAAAGTGGGAAGAAAAG+AGG | + | chr7.2:19310495-19310514 | MS.gene013976:CDS | 35.0% | |
CGAAGATATGAATCTGACAA+GGG | - | chr7.2:19309981-19310000 | None:intergenic | 35.0% | |
CGAATTATCAAACTAATGCG+CGG | + | chr7.2:19310379-19310398 | MS.gene013976:CDS | 35.0% | |
CTTAATCAAGGAAAACAGAC+CGG | + | chr7.2:19310984-19311003 | MS.gene013976:CDS | 35.0% | |
GATACTCCTGTGAAGAAATT+GGG | + | chr7.2:19310747-19310766 | MS.gene013976:CDS | 35.0% | |
GTTGACTACTTATGCTACAT+TGG | + | chr7.2:19310704-19310723 | MS.gene013976:CDS | 35.0% | |
GTTTAACGGTTCAGAAACTA+GGG | - | chr7.2:19310223-19310242 | None:intergenic | 35.0% | |
TAAGAGTTATTGGCAAAGCT+TGG | + | chr7.2:19310950-19310969 | MS.gene013976:CDS | 35.0% | |
TATGAATCTGACAAGGGATA+CGG | - | chr7.2:19309975-19309994 | None:intergenic | 35.0% | |
TTAACGTTGCTATCGTTGAT+TGG | + | chr7.2:19310456-19310475 | MS.gene013976:CDS | 35.0% | |
TTAATCAAGGAAAACAGACC+GGG | + | chr7.2:19310985-19311004 | MS.gene013976:CDS | 35.0% | |
TTCGACATGGATAACTCAAT+TGG | + | chr7.2:19310587-19310606 | MS.gene013976:CDS | 35.0% | |
! | GTCTGTTTTCCTTGATTAAG+AGG | - | chr7.2:19310984-19311003 | None:intergenic | 35.0% |
AAAGTGGGAAGAAAAGAGGT+AGG | + | chr7.2:19310499-19310518 | MS.gene013976:CDS | 40.0% | |
AACACTCAAACACTCCAAGT+CGG | + | chr7.2:19309841-19309860 | MS.gene013976:CDS | 40.0% | |
AAGTGGGAAGAAAAGAGGTA+GGG | + | chr7.2:19310500-19310519 | MS.gene013976:CDS | 40.0% | |
ATCCATGTCGAAATCACAGA+AGG | - | chr7.2:19310579-19310598 | None:intergenic | 40.0% | |
ATGCTAGAAGGAGGGTTTAA+CGG | - | chr7.2:19310237-19310256 | None:intergenic | 40.0% | |
GACATGGATAACTCAATTGG+AGG | + | chr7.2:19310590-19310609 | MS.gene013976:CDS | 40.0% | |
GCGAAGATATGAATCTGACA+AGG | - | chr7.2:19309982-19310001 | None:intergenic | 40.0% | |
GGATACTCCTGTGAAGAAAT+TGG | + | chr7.2:19310746-19310765 | MS.gene013976:CDS | 40.0% | |
GGTTTAACGGTTCAGAAACT+AGG | - | chr7.2:19310224-19310243 | None:intergenic | 40.0% | |
GTTATTGTTAGAGCGAGTGT+TGG | - | chr7.2:19309947-19309966 | None:intergenic | 40.0% | |
GTTCAGCAACCTCTTAATCA+AGG | + | chr7.2:19310972-19310991 | MS.gene013976:CDS | 40.0% | |
TATAAACCTTCAACGTGCCA+CGG | - | chr7.2:19310626-19310645 | None:intergenic | 40.0% | |
TTGGAGTCGTATGGGTTTAA+AGG | - | chr7.2:19309805-19309824 | None:intergenic | 40.0% | |
TTTGAATGCGAAGAGGAGAT+GGG | + | chr7.2:19310845-19310864 | MS.gene013976:CDS | 40.0% | |
! | GCTGTTCATGACGCTTTTAA+CGG | + | chr7.2:19310021-19310040 | MS.gene013976:CDS | 40.0% |
! | TGATTGCTTTGAATGCGAAG+AGG | + | chr7.2:19310838-19310857 | MS.gene013976:CDS | 40.0% |
!! | ACCAAAAAGAAGCACTAGGA+TGG | + | chr7.2:19310280-19310299 | MS.gene013976:CDS | 40.0% |
!! | TGATGATTTACCGCCGTTTT+GGG | + | chr7.2:19310323-19310342 | MS.gene013976:CDS | 40.0% |
!! | TTGAGTGTTGAGGACTTTGA+TGG | - | chr7.2:19309830-19309849 | None:intergenic | 40.0% |
!!! | AAACTAGGGTTTTGGAAGCT+AGG | - | chr7.2:19310209-19310228 | None:intergenic | 40.0% |
AGTGGGAAGAAAAGAGGTAG+GGG | + | chr7.2:19310501-19310520 | MS.gene013976:CDS | 45.0% | |
CATGTCGAAATCACAGAAGG+AGG | - | chr7.2:19310576-19310595 | None:intergenic | 45.0% | |
CGTATGGGTTTAAAGGTTCG+CGG | - | chr7.2:19309798-19309817 | None:intergenic | 45.0% | |
CTCCTTCTGTGATTTCGACA+TGG | + | chr7.2:19310574-19310593 | MS.gene013976:CDS | 45.0% | |
CTTTGAATGCGAAGAGGAGA+TGG | + | chr7.2:19310844-19310863 | MS.gene013976:CDS | 45.0% | |
GATGTTGGCCATTACGAAAC+CGG | - | chr7.2:19309719-19309738 | None:intergenic | 45.0% | |
GTCAGCGCGTGTTTCTTTAA+CGG | - | chr7.2:19310106-19310125 | None:intergenic | 45.0% | |
GTCGGCATTAAACACTACTC+CGG | + | chr7.2:19309739-19309758 | MS.gene013976:CDS | 45.0% | |
GTGTTTAATGCCGACGATGT+TGG | - | chr7.2:19309734-19309753 | None:intergenic | 45.0% | |
TTATCAAACTAATGCGCGGC+CGG | + | chr7.2:19310383-19310402 | MS.gene013976:CDS | 45.0% | |
TTCGTAATGGCCAACATCGT+CGG | + | chr7.2:19309721-19309740 | MS.gene013976:CDS | 45.0% | |
TTGGAGGAACATACTAACCG+TGG | + | chr7.2:19310606-19310625 | MS.gene013976:CDS | 45.0% | |
! | CGGTTCAGAAACTAGGGTTT+TGG | - | chr7.2:19310217-19310236 | None:intergenic | 45.0% |
! | CTGATGATTTACCGCCGTTT+TGG | + | chr7.2:19310322-19310341 | MS.gene013976:CDS | 45.0% |
! | CTTGGAGTGTTTGAGTGTTG+AGG | - | chr7.2:19309840-19309859 | None:intergenic | 45.0% |
! | GCCATCCTAGTGCTTCTTTT+TGG | - | chr7.2:19310284-19310303 | None:intergenic | 45.0% |
! | GTAGGTTTCGGATTGGGATT+GGG | - | chr7.2:19309692-19309711 | None:intergenic | 45.0% |
!! | CAGCACCAAAAAGAAGCACT+AGG | + | chr7.2:19310276-19310295 | MS.gene013976:CDS | 45.0% |
!!! | GAGGAGGATTGTTTTGGATG+AGG | + | chr7.2:19310773-19310792 | MS.gene013976:CDS | 45.0% |
AGCGCGTGTTTCTTTAACGG+CGG | - | chr7.2:19310103-19310122 | None:intergenic | 50.0% | |
AGGGTGGAGAGTGAGACAAA+TGG | + | chr7.2:19310534-19310553 | MS.gene013976:CDS | 50.0% | |
AGGTAGGGGTAGTGTAGAGA+GGG | + | chr7.2:19310515-19310534 | MS.gene013976:CDS | 50.0% | |
CCCTCTTTCTCCTCCCAAAA+CGG | - | chr7.2:19310339-19310358 | None:intergenic | 50.0% | |
CTACATTGGGAGCTGAGTTG+CGG | + | chr7.2:19310718-19310737 | MS.gene013976:CDS | 50.0% | |
CTCAAGATGCTGAGGAGTTG+AGG | + | chr7.2:19310667-19310686 | MS.gene013976:CDS | 50.0% | |
CTCCACCCCAATTTCTTCAC+AGG | - | chr7.2:19310756-19310775 | None:intergenic | 50.0% | |
CTCCTGTGAAGAAATTGGGG+TGG | + | chr7.2:19310751-19310770 | MS.gene013976:CDS | 50.0% | |
CTGTGAAGAAATTGGGGTGG+AGG | + | chr7.2:19310754-19310773 | MS.gene013976:CDS | 50.0% | |
GGATTAAGCCGAGGATTTCG+CGG | - | chr7.2:19309777-19309796 | None:intergenic | 50.0% | |
TACTAACCGTGGCACGTTGA+AGG | + | chr7.2:19310617-19310636 | MS.gene013976:CDS | 50.0% | |
TAGGAGGACTCAAGATGCTG+AGG | + | chr7.2:19310659-19310678 | MS.gene013976:CDS | 50.0% | |
TCTCTCGGGAGGGATATTTG+CGG | + | chr7.2:19310410-19310429 | MS.gene013976:CDS | 50.0% | |
TCTTTCTCCTCCCAAAACGG+CGG | - | chr7.2:19310336-19310355 | None:intergenic | 50.0% | |
TGAAGAAATTGGGGTGGAGG+AGG | + | chr7.2:19310757-19310776 | MS.gene013976:CDS | 50.0% | |
TGTTAATGCGGGACAGAGTC+AGG | + | chr7.2:19310812-19310831 | MS.gene013976:CDS | 50.0% | |
TTTGAACGATGGCTTCGACG+TGG | - | chr7.2:19309924-19309943 | None:intergenic | 50.0% | |
! | GGTAGGTTTCGGATTGGGAT+TGG | - | chr7.2:19309693-19309712 | None:intergenic | 50.0% |
! | TACCTGCAATCGACTCATCC+CGG | - | chr7.2:19311006-19311025 | None:intergenic | 50.0% |
! | TCGGATTGGGATTGGGAGAA+GGG | - | chr7.2:19309685-19309704 | None:intergenic | 50.0% |
! | TGATGGCGTTGGAGTCGTAT+GGG | - | chr7.2:19309813-19309832 | None:intergenic | 50.0% |
! | TGTTACGGAATCAGCGCTGA+CGG | - | chr7.2:19310130-19310149 | None:intergenic | 50.0% |
! | TTCGGATTGGGATTGGGAGA+AGG | - | chr7.2:19309686-19309705 | None:intergenic | 50.0% |
!! | AAGAGGAGATGGGCTGTTAC+GGG | + | chr7.2:19310855-19310874 | MS.gene013976:CDS | 50.0% |
!! | AGCGCTGATTCCGTAACAAC+CGG | + | chr7.2:19310132-19310151 | MS.gene013976:CDS | 50.0% |
!! | ATGATATGAGCGTCGAGGAG+AGG | - | chr7.2:19309901-19309920 | None:intergenic | 50.0% |
!! | GAAGAGGAGATGGGCTGTTA+CGG | + | chr7.2:19310854-19310873 | MS.gene013976:CDS | 50.0% |
!! | GCGAGTGTTGGTTTGAACGA+TGG | - | chr7.2:19309935-19309954 | None:intergenic | 50.0% |
!! | GTTGAGGACTTTGATGGCGT+TGG | - | chr7.2:19309824-19309843 | None:intergenic | 50.0% |
!! | TGATTTACCGCCGTTTTGGG+AGG | + | chr7.2:19310326-19310345 | MS.gene013976:CDS | 50.0% |
!! | TTGATGGCGTTGGAGTCGTA+TGG | - | chr7.2:19309814-19309833 | None:intergenic | 50.0% |
!!! | CCGTTTTGGGAGGAGAAAGA+GGG | + | chr7.2:19310336-19310355 | MS.gene013976:CDS | 50.0% |
!!! | CGTTTTGGGAGGAGAAAGAG+GGG | + | chr7.2:19310337-19310356 | MS.gene013976:CDS | 50.0% |
ACGGGGACGCCTATTCAGAA+TGG | + | chr7.2:19310873-19310892 | MS.gene013976:CDS | 55.0% | |
AGGGATATTTGCGGACGGGA+TGG | + | chr7.2:19310419-19310438 | MS.gene013976:CDS | 55.0% | |
CAATCCGAAACCTACCTCGC+CGG | + | chr7.2:19309697-19309716 | MS.gene013976:CDS | 55.0% | |
CATTACGAAACCGGCGAGGT+AGG | - | chr7.2:19309710-19309729 | None:intergenic | 55.0% | |
CGCGTTCGATGTAACCGACT+TGG | - | chr7.2:19309858-19309877 | None:intergenic | 55.0% | |
GAAACCGGCGAGGTAGGTTT+CGG | - | chr7.2:19309704-19309723 | None:intergenic | 55.0% | |
GAGGTAGGGGTAGTGTAGAG+AGG | + | chr7.2:19310514-19310533 | MS.gene013976:CDS | 55.0% | |
GCAAATATCCCTCCCGAGAG+AGG | - | chr7.2:19310411-19310430 | None:intergenic | 55.0% | |
GCGTGTTTCTTTAACGGCGG+CGG | - | chr7.2:19310100-19310119 | None:intergenic | 55.0% | |
GGCGAGGTAGGTTTCGGATT+GGG | - | chr7.2:19309698-19309717 | None:intergenic | 55.0% | |
GGGATATTTGCGGACGGGAT+GGG | + | chr7.2:19310420-19310439 | MS.gene013976:CDS | 55.0% | |
TAGGGGTAGTGTAGAGAGGG+TGG | + | chr7.2:19310518-19310537 | MS.gene013976:CDS | 55.0% | |
TCGGGAGGGATATTTGCGGA+CGG | + | chr7.2:19310414-19310433 | MS.gene013976:CDS | 55.0% | |
TTGCGGACGGGATGGGATTA+GGG | + | chr7.2:19310427-19310446 | MS.gene013976:CDS | 55.0% | |
TTTGCGGACGGGATGGGATT+AGG | + | chr7.2:19310426-19310445 | MS.gene013976:CDS | 55.0% | |
! | AAGGTTCGCGGATTAAGCCG+AGG | - | chr7.2:19309786-19309805 | None:intergenic | 55.0% |
! | CGTGGATGATATGAGCGTCG+AGG | - | chr7.2:19309906-19309925 | None:intergenic | 55.0% |
! | GGGGTGGAGGAGGATTGTTT+TGG | + | chr7.2:19310767-19310786 | MS.gene013976:CDS | 55.0% |
!! | AGAGGAGATGGGCTGTTACG+GGG | + | chr7.2:19310856-19310875 | MS.gene013976:CDS | 55.0% |
!! | CTACCTCGCCGGTTTCGTAA+TGG | + | chr7.2:19309708-19309727 | MS.gene013976:CDS | 55.0% |
!!! | GCCGTTTTGGGAGGAGAAAG+AGG | + | chr7.2:19310335-19310354 | MS.gene013976:CDS | 55.0% |
ATCACCGGCCGCGAAATCCT+CGG | + | chr7.2:19309766-19309785 | MS.gene013976:CDS | 60.0% | |
CACTACTCCGGCACCATCAC+CGG | + | chr7.2:19309751-19309770 | MS.gene013976:CDS | 60.0% | |
CGGCGAGGTAGGTTTCGGAT+TGG | - | chr7.2:19309699-19309718 | None:intergenic | 60.0% | |
CGGGAGGGATATTTGCGGAC+GGG | + | chr7.2:19310415-19310434 | MS.gene013976:CDS | 60.0% | |
GACCGGGATGAGTCGATTGC+AGG | + | chr7.2:19311001-19311020 | MS.gene013976:CDS | 60.0% | |
GGGAGCTGAGTTGCGGTGTT+CGG | + | chr7.2:19310725-19310744 | MS.gene013976:CDS | 60.0% | |
TAAGCCGAGGATTTCGCGGC+CGG | - | chr7.2:19309773-19309792 | None:intergenic | 60.0% | |
TGGCCATTACGAAACCGGCG+AGG | - | chr7.2:19309714-19309733 | None:intergenic | 60.0% | |
ATCCCTCCCGAGAGAGGCTC+CGG | - | chr7.2:19310405-19310424 | None:intergenic | 65.0% | |
GAGGATTTCGCGGCCGGTGA+TGG | - | chr7.2:19309767-19309786 | None:intergenic | 65.0% | |
GTCGAGGAGAGGAGCGAGAG+CGG | - | chr7.2:19309890-19309909 | None:intergenic | 65.0% | |
GAGGAGAGGAGCGAGAGCGG+CGG | - | chr7.2:19309887-19309906 | None:intergenic | 70.0% | |
! | TTCGCGGCCGGTGATGGTGC+CGG | - | chr7.2:19309761-19309780 | None:intergenic | 70.0% |
AGGAGCGAGAGCGGCGGCGA+CGG | - | chr7.2:19309881-19309900 | None:intergenic | 75.0% | |
GGCCGGAGCCTCTCTCGGGA+GGG | + | chr7.2:19310400-19310419 | MS.gene013976:CDS | 75.0% | |
TGCGCGGCCGGAGCCTCTCT+CGG | + | chr7.2:19310395-19310414 | MS.gene013976:CDS | 75.0% | |
! | CGGCCGGAGCCTCTCTCGGG+AGG | + | chr7.2:19310399-19310418 | MS.gene013976:CDS | 80.0% |
! | GCGCGGCCGGAGCCTCTCTC+GGG | + | chr7.2:19310396-19310415 | MS.gene013976:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 19309664 | 19311073 | 19309664 | ID=MS.gene013976 |
chr7.2 | mRNA | 19309664 | 19311073 | 19309664 | ID=MS.gene013976.t1;Parent=MS.gene013976 |
chr7.2 | exon | 19309664 | 19311073 | 19309664 | ID=MS.gene013976.t1.exon1;Parent=MS.gene013976.t1 |
chr7.2 | CDS | 19309664 | 19311073 | 19309664 | ID=cds.MS.gene013976.t1;Parent=MS.gene013976.t1 |
Gene Sequence |
Protein sequence |