AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014132

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014132.t1 MTR_7g091810 97.015 268 8 0 1 268 1 268 0.0 539
MS.gene014132.t1 MTR_0100s0160 67.247 287 73 4 1 268 1 285 6.84e-133 377
MS.gene014132.t1 MTR_6g008210 42.675 157 82 3 2 154 5 157 1.36e-36 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014132.t1 AT2G41835 58.451 284 95 5 1 268 1 277 1.20e-111 323
MS.gene014132.t1 AT3G57480 57.836 268 92 4 1 268 1 247 3.36e-103 300
MS.gene014132.t1 AT3G57480 57.836 268 92 4 1 268 1 247 3.36e-103 300
MS.gene014132.t1 AT3G28210 44.872 156 77 4 2 154 5 154 8.80e-36 126
MS.gene014132.t1 AT3G28210 44.872 156 77 4 2 154 5 154 8.80e-36 126
MS.gene014132.t1 AT5G48205 54.128 109 22 3 1 106 1 84 2.48e-28 107

Find 69 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACGTGGTTGAAGTTAAAT+TGG 0.210618 7.4:-17157882 None:intergenic
TTGGATCTTGGTCTGGAATT+AGG 0.236801 7.4:-17157595 None:intergenic
AGGAGTGGCGGCAACCAATA+TGG 0.258450 7.4:+17158070 MS.gene014132:CDS
ACCAAGATCCAAACATAGTT+TGG 0.297216 7.4:+17157606 MS.gene014132:CDS
ACATGCTCTACAAGGGAAAC+TGG 0.328561 7.4:-17158148 None:intergenic
CCCAAACTATGTTTGGATCT+TGG 0.346442 7.4:-17157607 None:intergenic
GACTTCAAGCCTTCTTGACT+TGG 0.353989 7.4:+17157913 MS.gene014132:CDS
TTGCCTAGATCTGGGAATTC+AGG 0.358612 7.4:-17156184 None:intergenic
CACTTGTGATCGTTGCAATC+AGG 0.365381 7.4:+17156252 MS.gene014132:CDS
GAACAATGCTTGCCTAGATC+TGG 0.368668 7.4:-17156193 None:intergenic
AACGGTGACATCTTGTTTGT+TGG 0.370225 7.4:-17157540 None:intergenic
TATGTCCACTTTGTGCTAAA+GGG 0.378295 7.4:+17157567 MS.gene014132:CDS
CAGAAAACCTTTACTGCACT+TGG 0.385251 7.4:-17158122 None:intergenic
GGTCCAGGACATTTGTGATC+AGG 0.386396 7.4:-17157788 None:intergenic
ACACCTTCTTTGCCCCATAT+TGG 0.386967 7.4:-17158084 None:intergenic
TGACGCTCCCAAACTATGTT+TGG 0.396047 7.4:-17157614 None:intergenic
GGAGTGGCGGCAACCAATAT+GGG 0.400426 7.4:+17158071 MS.gene014132:CDS
CATTGTTTGAAGCACAGGTT+TGG 0.404986 7.4:+17157764 MS.gene014132:CDS
ACTAAGGTCTCTCTGCATCC+TGG 0.410212 7.4:-17157701 None:intergenic
ATATGTCCACTTTGTGCTAA+AGG 0.412254 7.4:+17157566 MS.gene014132:CDS
TTGACCATTGTTTGAAGCAC+AGG 0.415680 7.4:+17157759 MS.gene014132:CDS
CTAAGGTCTCTCTGCATCCT+GGG 0.434135 7.4:-17157700 None:intergenic
GACGTGGTTGAAGTTAAATT+GGG 0.435317 7.4:-17157881 None:intergenic
ACTATGTTTGGATCTTGGTC+TGG 0.435501 7.4:-17157602 None:intergenic
ACGGTGACATCTTGTTTGTT+GGG 0.438220 7.4:-17157539 None:intergenic
CCCTCTCAACATGCTCTACA+AGG 0.443451 7.4:-17158156 None:intergenic
CCAAGATCCAAACATAGTTT+GGG 0.458482 7.4:+17157607 MS.gene014132:CDS
GTCTCTCTGCATCCTGGGGC+AGG 0.461132 7.4:-17157695 None:intergenic
TGGTACTAGTAATAATCAAC+TGG 0.476635 7.4:+17157973 MS.gene014132:CDS
GATTGTGTTTGAGAATACTA+AGG 0.477004 7.4:-17157717 None:intergenic
GCATGCCCCAAGTGCAGTAA+AGG 0.479086 7.4:+17158115 MS.gene014132:CDS
GCTTCTAAATTGAGTGGGAT+AGG 0.483203 7.4:+17157935 MS.gene014132:CDS
ACTCCTGAATTCCCAGATCT+AGG 0.493436 7.4:+17156181 MS.gene014132:CDS
ATCCACCAAACTCGTGGCCG+AGG 0.511045 7.4:-17158026 None:intergenic
CAACCAATATGGGGCAAAGA+AGG 0.517022 7.4:+17158081 MS.gene014132:CDS
TTCCTCGGCCACGAGTTTGG+TGG 0.518637 7.4:+17158024 MS.gene014132:CDS
CTCAAACACAATCAAGTGTA+GGG 0.519840 7.4:+17157727 MS.gene014132:CDS
ATTTAGAAGCCAAGTCAAGA+AGG 0.521688 7.4:-17157922 None:intergenic
GGACCTGATCACAAATGTCC+TGG 0.523810 7.4:+17157785 MS.gene014132:CDS
AGAAAACCTTTACTGCACTT+GGG 0.532761 7.4:-17158121 None:intergenic
CATGCTCTACAAGGGAAACT+GGG 0.533711 7.4:-17158147 None:intergenic
ACTTGGCTTCTAAATTGAGT+GGG 0.535363 7.4:+17157930 MS.gene014132:CDS
AACAATGCTTGCCTAGATCT+GGG 0.537422 7.4:-17156192 None:intergenic
CTTCAACCACGTCATCTAAG+TGG 0.540578 7.4:+17157891 MS.gene014132:CDS
CCTTGTAGAGCATGTTGAGA+GGG 0.543468 7.4:+17158156 MS.gene014132:CDS
GACTTGGCTTCTAAATTGAG+TGG 0.550800 7.4:+17157929 MS.gene014132:CDS
CAAACCTGTGCTTCAAACAA+TGG 0.566927 7.4:-17157763 None:intergenic
GAGCATGTTGAGAGGGATCA+TGG 0.569049 7.4:+17158163 MS.gene014132:CDS
ATGTCCACTTTGTGCTAAAG+GGG 0.570588 7.4:+17157568 MS.gene014132:CDS
GAAAACCTTTACTGCACTTG+GGG 0.571579 7.4:-17158120 None:intergenic
TCTCAAACACAATCAAGTGT+AGG 0.571728 7.4:+17157726 MS.gene014132:CDS
ATAGGACAGAGCAGTGGCAG+TGG 0.577401 7.4:+17157953 MS.gene014132:CDS
CGCATGATCCACCAAACTCG+TGG 0.584791 7.4:-17158032 None:intergenic
ATTGCAACGATCACAAGTGA+AGG 0.586850 7.4:-17156248 None:intergenic
AGTCTTTGGAATATGAGTAA+TGG 0.594698 7.4:+17157842 MS.gene014132:CDS
AATTATGCTCAATATAACTT+CGG 0.599455 7.4:-17157508 None:intergenic
CCCTTGTAGAGCATGTTGAG+AGG 0.611040 7.4:+17158155 MS.gene014132:CDS
GAAAACTTAGCATCACATAG+TGG 0.613925 7.4:-17158004 None:intergenic
CGAACCCCTTTAGCACAAAG+TGG 0.621156 7.4:-17157572 None:intergenic
AAAGTTCATCAAAGGAGTGG+CGG 0.638449 7.4:+17158058 MS.gene014132:CDS
TGAAGTCCACTTAGATGACG+TGG 0.643218 7.4:-17157897 None:intergenic
TTGCAACGATCACAAGTGAA+GGG 0.653221 7.4:-17156247 None:intergenic
CCTCTCAACATGCTCTACAA+GGG 0.654661 7.4:-17158155 None:intergenic
TAAGGTCTCTCTGCATCCTG+GGG 0.659577 7.4:-17157699 None:intergenic
GAGTGGCGGCAACCAATATG+GGG 0.665147 7.4:+17158072 MS.gene014132:CDS
AATCAAGTGTAGGGACTGTG+AGG 0.678787 7.4:+17157736 MS.gene014132:CDS
AGTGGGATAGGACAGAGCAG+TGG 0.703021 7.4:+17157947 MS.gene014132:CDS
ACAAAGTGGACATATAACAA+CGG 0.739755 7.4:-17157558 None:intergenic
CATGTTGAGAGGGATCATGG+TGG 0.808965 7.4:+17158166 MS.gene014132:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTTTCAAAAAGAAA+TGG + chr7.4:17156815-17156834 MS.gene014132:intron 10.0%
!!! GTTATTTTCATAAATTATTT+CGG + chr7.4:17157211-17157230 MS.gene014132:intron 10.0%
!! AGAAAATAATAAAATGAAAC+TGG - chr7.4:17156363-17156382 None:intergenic 15.0%
!! TTGTATATATATACTAGTAT+TGG + chr7.4:17156757-17156776 MS.gene014132:intron 15.0%
!! TTGTTTCGAAATTAATTTAT+TGG + chr7.4:17156313-17156332 MS.gene014132:intron 15.0%
!!! ATTTAAAGTAAATCATTTAC+TGG + chr7.4:17156955-17156974 MS.gene014132:intron 15.0%
!! AATCATTTACATAAACTGTT+CGG - chr7.4:17157279-17157298 None:intergenic 20.0%
!! AATTATGCTCAATATAACTT+CGG - chr7.4:17157511-17157530 None:intergenic 20.0%
!!! AAACACAAATTTCTAAAAGT+TGG + chr7.4:17156863-17156882 MS.gene014132:intron 20.0%
!!! AACACAAATTTCTAAAAGTT+GGG + chr7.4:17156864-17156883 MS.gene014132:intron 20.0%
!!! AAGCAATGTTTTTAATCAAA+AGG - chr7.4:17156405-17156424 None:intergenic 20.0%
!!! TATCATCTATATAGAGTATT+CGG + chr7.4:17157083-17157102 MS.gene014132:intron 20.0%
! AAACTATACAATAACCTTAC+TGG - chr7.4:17157064-17157083 None:intergenic 25.0%
! CAATATCGATATTGTTAGTT+TGG + chr7.4:17156465-17156484 MS.gene014132:intron 25.0%
! GTTTCACAAAACTATAGTAA+TGG - chr7.4:17156847-17156866 None:intergenic 25.0%
! TGAATTTATTGAAACAAGCT+AGG + chr7.4:17157234-17157253 MS.gene014132:intron 25.0%
!! ATAGAATTGACTTTGAAAGT+TGG + chr7.4:17156733-17156752 MS.gene014132:intron 25.0%
!! GTTTTTCATTTATGAGTCTT+TGG + chr7.4:17157828-17157847 MS.gene014132:CDS 25.0%
!! TGGTTATTTCATTTGAGAAA+TGG + chr7.4:17156913-17156932 MS.gene014132:intron 25.0%
!! TTGCTAGTGTTTGATTTATA+GGG + chr7.4:17156554-17156573 MS.gene014132:intron 25.0%
!!! AAAACTTGTTTCCAACTTTT+TGG - chr7.4:17157813-17157832 None:intergenic 25.0%
!!! AAACTTGTTTCCAACTTTTT+GGG - chr7.4:17157812-17157831 None:intergenic 25.0%
!!! TATGTTTTTTTCTCGTTTTC+AGG - chr7.4:17156646-17156665 None:intergenic 25.0%
AAAAAAGTTCATCAAAGGAG+TGG + chr7.4:17158055-17158074 MS.gene014132:CDS 30.0%
AACAATATACCTGCAAAAGA+TGG - chr7.4:17157481-17157500 None:intergenic 30.0%
ACAAAGTGGACATATAACAA+CGG - chr7.4:17157561-17157580 None:intergenic 30.0%
ATGAACTTAAGTGATTAAGC+TGG + chr7.4:17156893-17156912 MS.gene014132:intron 30.0%
ATGCGAAAAAAGTTCATCAA+AGG + chr7.4:17158050-17158069 MS.gene014132:CDS 30.0%
GATTGTGTTTGAGAATACTA+AGG - chr7.4:17157720-17157739 None:intergenic 30.0%
GCTTAATAGAAACTTCAATG+AGG - chr7.4:17157022-17157041 None:intergenic 30.0%
TGAGGATGATGTACATATAT+TGG + chr7.4:17157389-17157408 MS.gene014132:intron 30.0%
TGGTACTAGTAATAATCAAC+TGG + chr7.4:17157973-17157992 MS.gene014132:CDS 30.0%
TTACTGGAAATAATCAACTG+AGG + chr7.4:17156971-17156990 MS.gene014132:intron 30.0%
! CTTTTGCAGGTATATTGTTT+GGG + chr7.4:17157482-17157501 MS.gene014132:intron 30.0%
! GTTGCTAGTGTTTGATTTAT+AGG + chr7.4:17156553-17156572 MS.gene014132:intron 30.0%
! TCTTTTGCAGGTATATTGTT+TGG + chr7.4:17157481-17157500 MS.gene014132:intron 30.0%
! TGCTAGTGTTTGATTTATAG+GGG + chr7.4:17156555-17156574 MS.gene014132:intron 30.0%
! TTTTGCAGGTATATTGTTTG+GGG + chr7.4:17157483-17157502 MS.gene014132:intron 30.0%
!! AGTCTTTGGAATATGAGTAA+TGG + chr7.4:17157842-17157861 MS.gene014132:CDS 30.0%
!!! GTGGCTTTTTCATAATTTGA+TGG - chr7.4:17157659-17157678 None:intergenic 30.0%
AATGAAGCAACTCTTTGTGT+AGG + chr7.4:17157440-17157459 MS.gene014132:intron 35.0%
ACCAAGATCCAAACATAGTT+TGG + chr7.4:17157606-17157625 MS.gene014132:CDS 35.0%
ACTTGGCTTCTAAATTGAGT+GGG + chr7.4:17157930-17157949 MS.gene014132:CDS 35.0%
AGAAAACCTTTACTGCACTT+GGG - chr7.4:17158124-17158143 None:intergenic 35.0%
ATATGTCCACTTTGTGCTAA+AGG + chr7.4:17157566-17157585 MS.gene014132:CDS 35.0%
ATTTAGAAGCCAAGTCAAGA+AGG - chr7.4:17157925-17157944 None:intergenic 35.0%
CCAAGATCCAAACATAGTTT+GGG + chr7.4:17157607-17157626 MS.gene014132:CDS 35.0%
CTCAAACACAATCAAGTGTA+GGG + chr7.4:17157727-17157746 MS.gene014132:CDS 35.0%
GAAAACTTAGCATCACATAG+TGG - chr7.4:17158007-17158026 None:intergenic 35.0%
GACGTGGTTGAAGTTAAATT+GGG - chr7.4:17157884-17157903 None:intergenic 35.0%
GAGTTGCTTCATTGAAAACA+AGG - chr7.4:17157433-17157452 None:intergenic 35.0%
GATGTACATATATTGGATCG+TGG + chr7.4:17157396-17157415 MS.gene014132:intron 35.0%
TATGTCCACTTTGTGCTAAA+GGG + chr7.4:17157567-17157586 MS.gene014132:CDS 35.0%
TCTCAAACACAATCAAGTGT+AGG + chr7.4:17157726-17157745 MS.gene014132:CDS 35.0%
TGACGTGGTTGAAGTTAAAT+TGG - chr7.4:17157885-17157904 None:intergenic 35.0%
TGAGCTAAAGGTTAATGAGT+TGG + chr7.4:17156604-17156623 MS.gene014132:intron 35.0%
! AATTTTCAAACCCGAAGAAC+TGG - chr7.4:17157350-17157369 None:intergenic 35.0%
! AGTGTTTGATTTATAGGGGT+TGG + chr7.4:17156559-17156578 MS.gene014132:intron 35.0%
! ATGTGATGCTAAGTTTTCCT+CGG + chr7.4:17158009-17158028 MS.gene014132:CDS 35.0%
! GTGTTTGATTTATAGGGGTT+GGG + chr7.4:17156560-17156579 MS.gene014132:intron 35.0%
!!! AGGACACTTTTTCTTCTTTG+TGG - chr7.4:17157678-17157697 None:intergenic 35.0%
!!! TTTTGACTTCTCCAGTTCTT+CGG + chr7.4:17157336-17157355 MS.gene014132:intron 35.0%
AAAGTTCATCAAAGGAGTGG+CGG + chr7.4:17158058-17158077 MS.gene014132:CDS 40.0%
AACAATGCTTGCCTAGATCT+GGG - chr7.4:17156195-17156214 None:intergenic 40.0%
ACTATGTTTGGATCTTGGTC+TGG - chr7.4:17157605-17157624 None:intergenic 40.0%
ATGTCCACTTTGTGCTAAAG+GGG + chr7.4:17157568-17157587 MS.gene014132:CDS 40.0%
ATTGCAACGATCACAAGTGA+AGG - chr7.4:17156251-17156270 None:intergenic 40.0%
ATTTATAGGGGTTGGGTAGT+GGG + chr7.4:17156567-17156586 MS.gene014132:intron 40.0%
CAAACCTGTGCTTCAAACAA+TGG - chr7.4:17157766-17157785 None:intergenic 40.0%
CAGAAAACCTTTACTGCACT+TGG - chr7.4:17158125-17158144 None:intergenic 40.0%
CCCAAACTATGTTTGGATCT+TGG - chr7.4:17157610-17157629 None:intergenic 40.0%
GAAAACCTTTACTGCACTTG+GGG - chr7.4:17158123-17158142 None:intergenic 40.0%
GACTTGGCTTCTAAATTGAG+TGG + chr7.4:17157929-17157948 MS.gene014132:CDS 40.0%
GCTTAATGCAAAAGCCAGTA+AGG + chr7.4:17157047-17157066 MS.gene014132:intron 40.0%
GCTTCTAAATTGAGTGGGAT+AGG + chr7.4:17157935-17157954 MS.gene014132:CDS 40.0%
GTTTGGATACATCTCGAAGT+TGG + chr7.4:17156482-17156501 MS.gene014132:intron 40.0%
TTGCAACGATCACAAGTGAA+GGG - chr7.4:17156250-17156269 None:intergenic 40.0%
! AACGGTGACATCTTGTTTGT+TGG - chr7.4:17157543-17157562 None:intergenic 40.0%
! ACGGTGACATCTTGTTTGTT+GGG - chr7.4:17157542-17157561 None:intergenic 40.0%
! ATATCAGCTCCATCTTTTGC+AGG + chr7.4:17157469-17157488 MS.gene014132:intron 40.0%
! CAAGTGCAGTAAAGGTTTTC+TGG + chr7.4:17158123-17158142 MS.gene014132:CDS 40.0%
! CATTGTTTGAAGCACAGGTT+TGG + chr7.4:17157764-17157783 MS.gene014132:CDS 40.0%
! GTTGCTGTGATAGACTTTTG+AGG + chr7.4:17157371-17157390 MS.gene014132:intron 40.0%
! TTGACCATTGTTTGAAGCAC+AGG + chr7.4:17157759-17157778 MS.gene014132:CDS 40.0%
! TTGGATCTTGGTCTGGAATT+AGG - chr7.4:17157598-17157617 None:intergenic 40.0%
! TTTGACTTCTCCAGTTCTTC+GGG + chr7.4:17157337-17157356 MS.gene014132:intron 40.0%
AATCAAGTGTAGGGACTGTG+AGG + chr7.4:17157736-17157755 MS.gene014132:CDS 45.0%
ACACCTTCTTTGCCCCATAT+TGG - chr7.4:17158087-17158106 None:intergenic 45.0%
ACATGCTCTACAAGGGAAAC+TGG - chr7.4:17158151-17158170 None:intergenic 45.0%
ACTCCTGAATTCCCAGATCT+AGG + chr7.4:17156181-17156200 MS.gene014132:CDS 45.0%
ACTGTTCGGCTCATGTTCAT+AGG - chr7.4:17157265-17157284 None:intergenic 45.0%
ATGTCCTGGACCCAAAAAGT+TGG + chr7.4:17157799-17157818 MS.gene014132:CDS 45.0%
CAACCAATATGGGGCAAAGA+AGG + chr7.4:17158081-17158100 MS.gene014132:CDS 45.0%
CACTTGTGATCGTTGCAATC+AGG + chr7.4:17156252-17156271 MS.gene014132:CDS 45.0%
CATGCTCTACAAGGGAAACT+GGG - chr7.4:17158150-17158169 None:intergenic 45.0%
CCTCTCAACATGCTCTACAA+GGG - chr7.4:17158158-17158177 None:intergenic 45.0%
CCTTGTAGAGCATGTTGAGA+GGG + chr7.4:17158156-17158175 MS.gene014132:CDS 45.0%
CTGTTCGGCTCATGTTCATA+GGG - chr7.4:17157264-17157283 None:intergenic 45.0%
CTTCAACCACGTCATCTAAG+TGG + chr7.4:17157891-17157910 MS.gene014132:CDS 45.0%
GAACAATGCTTGCCTAGATC+TGG - chr7.4:17156196-17156215 None:intergenic 45.0%
GACTTCAAGCCTTCTTGACT+TGG + chr7.4:17157913-17157932 MS.gene014132:CDS 45.0%
GATTTATAGGGGTTGGGTAG+TGG + chr7.4:17156566-17156585 MS.gene014132:intron 45.0%
TGAAGTCCACTTAGATGACG+TGG - chr7.4:17157900-17157919 None:intergenic 45.0%
TGACGCTCCCAAACTATGTT+TGG - chr7.4:17157617-17157636 None:intergenic 45.0%
TTGCCTAGATCTGGGAATTC+AGG - chr7.4:17156187-17156206 None:intergenic 45.0%
! GCTCAACTAGTCTGAGCTAA+AGG + chr7.4:17156592-17156611 MS.gene014132:intron 45.0%
! GGTTAATGAGTTGGAAGTCC+AGG + chr7.4:17156613-17156632 MS.gene014132:intron 45.0%
!! CATCTCGAAGTTGGTTTGTG+TGG + chr7.4:17156491-17156510 MS.gene014132:intron 45.0%
!! TCGTTTTCAGGACTTGAACC+TGG - chr7.4:17156634-17156653 None:intergenic 45.0%
!!! GTTTCCAACTTTTTGGGTCC+AGG - chr7.4:17157806-17157825 None:intergenic 45.0%
ACTAAGGTCTCTCTGCATCC+TGG - chr7.4:17157704-17157723 None:intergenic 50.0%
CATGTTGAGAGGGATCATGG+TGG + chr7.4:17158166-17158185 MS.gene014132:CDS 50.0%
CCCTCTCAACATGCTCTACA+AGG - chr7.4:17158159-17158178 None:intergenic 50.0%
CCCTTGTAGAGCATGTTGAG+AGG + chr7.4:17158155-17158174 MS.gene014132:CDS 50.0%
CGAACCCCTTTAGCACAAAG+TGG - chr7.4:17157575-17157594 None:intergenic 50.0%
CTAAGGTCTCTCTGCATCCT+GGG - chr7.4:17157703-17157722 None:intergenic 50.0%
GAGCATGTTGAGAGGGATCA+TGG + chr7.4:17158163-17158182 MS.gene014132:CDS 50.0%
GGACCTGATCACAAATGTCC+TGG + chr7.4:17157785-17157804 MS.gene014132:CDS 50.0%
GGTCCAGGACATTTGTGATC+AGG - chr7.4:17157791-17157810 None:intergenic 50.0%
TAAGGTCTCTCTGCATCCTG+GGG - chr7.4:17157702-17157721 None:intergenic 50.0%
!! AAGAAAAAGTGTCCTGCCCC+AGG + chr7.4:17157683-17157702 MS.gene014132:CDS 50.0%
AGGAGTGGCGGCAACCAATA+TGG + chr7.4:17158070-17158089 MS.gene014132:CDS 55.0%
AGTGGGATAGGACAGAGCAG+TGG + chr7.4:17157947-17157966 MS.gene014132:CDS 55.0%
ATAGGACAGAGCAGTGGCAG+TGG + chr7.4:17157953-17157972 MS.gene014132:CDS 55.0%
CGCATGATCCACCAAACTCG+TGG - chr7.4:17158035-17158054 None:intergenic 55.0%
GAGTGGCGGCAACCAATATG+GGG + chr7.4:17158072-17158091 MS.gene014132:CDS 55.0%
GCATGCCCCAAGTGCAGTAA+AGG + chr7.4:17158115-17158134 MS.gene014132:CDS 55.0%
GGAGTGGCGGCAACCAATAT+GGG + chr7.4:17158071-17158090 MS.gene014132:CDS 55.0%
! GTTTTCCTCGGCCACGAGTT+TGG + chr7.4:17158021-17158040 MS.gene014132:CDS 55.0%
ATCCACCAAACTCGTGGCCG+AGG - chr7.4:17158029-17158048 None:intergenic 60.0%
TTCCTCGGCCACGAGTTTGG+TGG + chr7.4:17158024-17158043 MS.gene014132:CDS 60.0%
GTCTCTCTGCATCCTGGGGC+AGG - chr7.4:17157698-17157717 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 17156175 17158198 17156175 ID=MS.gene014132
chr7.4 mRNA 17156175 17158198 17156175 ID=MS.gene014132.t1;Parent=MS.gene014132
chr7.4 exon 17156175 17156273 17156175 ID=MS.gene014132.t1.exon1;Parent=MS.gene014132.t1
chr7.4 CDS 17156175 17156273 17156175 ID=cds.MS.gene014132.t1;Parent=MS.gene014132.t1
chr7.4 exon 17157491 17158198 17157491 ID=MS.gene014132.t1.exon2;Parent=MS.gene014132.t1
chr7.4 CDS 17157491 17158198 17157491 ID=cds.MS.gene014132.t1;Parent=MS.gene014132.t1
Gene Sequence

>MS.gene014132

ATGGGGACTCCTGAATTCCCAGATCTAGGCAAGCATTGTTCTGTTTCTGATTGCAGACTCATCGATTTCTTGCCCTTCACTTGTGATCGTTGCAATCAGGTTTTGTTTTTCATCTCTCTCTCTCTCTCTCTCTTGTTTTTGTTTCGAAATTAATTTATTGGATTATTGATTAGCAATTTGTGAGTCCAGTTTCATTTTATTATTTTCTTCTAGTTATGTTGTTAATTCCTTTTGATTAAAAACATTGCTTTAATGTTGTTTTTGTTTTTAATAACATTTAGTTCAATTGACAATATCGATATTGTTAGTTTGGATACATCTCGAAGTTGGTTTGTGTGGTGTTTCTCATTTCATCTGCAGAAACAAAAATAATGTTTTGTTGCTAGTGTTTGATTTATAGGGGTTGGGTAGTGGGTAGCTCAACTAGTCTGAGCTAAAGGTTAATGAGTTGGAAGTCCAGGTTCAAGTCCTGAAAACGAGAAAAAAACATAACAATTAACATGCTAACAACTGTCATTAAAAAAATAAAGTGTTTGATTTATATTCTGATGTAGTTTAATAGAATTGACTTTGAAAGTTGGATTGTATATATATACTAGTATTGGTATATCAGTTTATTTTAGAGTAAGAATTTTCTTATAAATTTTTTTCAAAAAGAAATGGAGAAATCCATTACTATAGTTTTGTGAAACACAAATTTCTAAAAGTTGGGACATGTATGAACTTAAGTGATTAAGCTGGTTATTTCATTTGAGAAATGGACATCATTTCAACTTTTTAATTTAAAGTAAATCATTTACTGGAAATAATCAACTGAGGCATATTCATATTCTGCAATCACAAACCTCATTGAAGTTTCTATTAAGCTGAGTGCTTAATGCAAAAGCCAGTAAGGTTATTGTATAGTTTATCATCTATATAGAGTATTCGGATAAGTAACTTAATTAAGTGCTTACGTAGTAAGTGTTTATATACAAACACTTGTGTATAAACTCTTTCTAAAGTCAAAATTTGAATATAGTTAATCATTTTTTAAGTTATTTTCATAAATTATTTCGGTGAATTTATTGAAACAAGCTAGGAAGACCCTATGAACATGAGCCGAACAGTTTATGTAAATGATTGCTTGCATATTAGTGAAACACTTAGTTTTGATAAGAATTTTGACTTCTCCAGTTCTTCGGGTTTGAAAATTTGTTGCTGTGATAGACTTTTGAGGATGATGTACATATATTGGATCGTGGATTACTAGTTTCCTTGTTTTCAATGAAGCAACTCTTTGTGTAGGCTGATTATATCAGCTCCATCTTTTGCAGGTATATTGTTTGGGGCACCGAAGTTATATTGAGCATAATTGTACAAAACCCAACAAACAAGATGTCACCGTTGTTATATGTCCACTTTGTGCTAAAGGGGTTCGCCTAATTCCAGACCAAGATCCAAACATAGTTTGGGAGCGTCATTTGAACACAGACTGTGATCCATCAAATTATGAAAAAGCCACAAAGAAGAAAAAGTGTCCTGCCCCAGGATGCAGAGAGACCTTAGTATTCTCAAACACAATCAAGTGTAGGGACTGTGAGGTTGACCATTGTTTGAAGCACAGGTTTGGACCTGATCACAAATGTCCTGGACCCAAAAAGTTGGAAACAAGTTTTTCATTTATGAGTCTTTGGAATATGAGTAATGGTAAAGAAGAGTCAAAACCCAATTTAACTTCAACCACGTCATCTAAGTGGACTTCAAGCCTTCTTGACTTGGCTTCTAAATTGAGTGGGATAGGACAGAGCAGTGGCAGTGGTACTAGTAATAATCAACTGGAGAAGTGTCCACTATGTGATGCTAAGTTTTCCTCGGCCACGAGTTTGGTGGATCATGCGAAAAAAGTTCATCAAAGGAGTGGCGGCAACCAATATGGGGCAAAGAAGGTGTCGATTTCTGCATGCCCCAAGTGCAGTAAAGGTTTTCTGGACCCAGTTTCCCTTGTAGAGCATGTTGAGAGGGATCATGGTGGTTGTTCTTGA
Protein sequence

>MS.gene014132.t1

MGTPEFPDLGKHCSVSDCRLIDFLPFTCDRCNQVYCLGHRSYIEHNCTKPNKQDVTVVICPLCAKGVRLIPDQDPNIVWERHLNTDCDPSNYEKATKKKKCPAPGCRETLVFSNTIKCRDCEVDHCLKHRFGPDHKCPGPKKLETSFSFMSLWNMSNGKEESKPNLTSTTSSKWTSSLLDLASKLSGIGQSSGSGTSNNQLEKCPLCDAKFSSATSLVDHAKKVHQRSGGNQYGAKKVSISACPKCSKGFLDPVSLVEHVERDHGGCS