AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014142

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014142.t1 MTR_7g092070 98.093 734 14 0 1 734 1 734 0.0 1488
MS.gene014142.t1 MTR_3g029590 64.206 718 221 15 33 731 31 731 0.0 845
MS.gene014142.t1 MTR_1g050438 53.808 604 255 12 33 630 1 586 0.0 568
MS.gene014142.t1 MTR_0728s0020 53.400 603 259 10 33 630 17 602 0.0 568
MS.gene014142.t1 MTR_5g082830 42.647 748 297 24 34 731 18 683 2.77e-163 487
MS.gene014142.t1 MTR_5g071070 41.691 686 302 14 39 678 27 660 7.54e-153 461
MS.gene014142.t1 MTR_3g435590 57.107 394 145 6 33 422 18 391 4.51e-145 433
MS.gene014142.t1 MTR_3g435590 60.377 53 21 0 623 675 416 468 2.53e-12 70.1
MS.gene014142.t1 MTR_1g075890 41.420 676 299 19 44 680 30 647 3.50e-142 432
MS.gene014142.t1 MTR_5g071070 40.952 630 274 14 95 678 1 578 8.67e-134 409
MS.gene014142.t1 MTR_3g435680 50.124 403 143 10 95 495 5 351 3.14e-110 340
MS.gene014142.t1 MTR_3g070880 39.912 456 161 11 45 490 8 360 1.25e-95 306
MS.gene014142.t1 MTR_3g464260 39.615 467 195 9 50 516 28 407 1.80e-94 303
MS.gene014142.t1 MTR_3g464280 33.943 601 245 16 62 661 32 481 1.27e-82 271
MS.gene014142.t1 MTR_6g090380 75.701 107 26 0 260 366 99 205 2.68e-57 200
MS.gene014142.t1 MTR_8g102100 57.229 166 57 2 260 417 77 236 3.65e-56 197
MS.gene014142.t1 MTR_2g090605 69.369 111 34 0 264 374 77 187 1.57e-53 191
MS.gene014142.t1 MTR_3g464270 33.971 418 202 11 263 675 8 356 2.09e-53 188
MS.gene014142.t1 MTR_3g103960 61.029 136 49 2 254 388 43 175 1.94e-52 183
MS.gene014142.t1 MTR_4g078660 66.355 107 36 0 260 366 56 162 2.13e-50 179
MS.gene014142.t1 MTR_3g464290 32.397 463 195 15 243 677 79 451 1.38e-46 172
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014142.t1 AT2G41900 65.834 761 188 22 1 734 1 716 0.0 884
MS.gene014142.t1 AT5G12850 53.748 707 270 19 41 727 36 705 0.0 684
MS.gene014142.t1 AT5G58620 44.328 670 252 18 44 683 11 589 5.22e-162 481
MS.gene014142.t1 AT2G40140 40.311 707 257 20 43 728 29 591 1.59e-143 433
MS.gene014142.t1 AT2G40140 40.311 707 257 20 43 728 29 591 1.59e-143 433
MS.gene014142.t1 AT3G55980 47.586 435 156 9 41 461 24 400 4.89e-123 380
MS.gene014142.t1 AT3G55980 47.586 435 156 9 41 461 91 467 4.37e-122 380
MS.gene014142.t1 AT4G29190 51.389 216 93 4 220 428 36 246 1.23e-58 202
MS.gene014142.t1 AT2G19810 56.604 159 68 1 210 368 25 182 9.93e-57 197
MS.gene014142.t1 AT2G25900 72.477 109 30 0 260 368 86 194 1.05e-56 196
MS.gene014142.t1 AT2G25900 72.477 109 30 0 260 368 86 194 1.05e-56 196
MS.gene014142.t1 AT5G07500 64.463 121 43 0 246 366 34 154 9.72e-55 188
MS.gene014142.t1 AT1G03790 59.859 142 49 3 242 379 64 201 7.36e-52 185
MS.gene014142.t1 AT5G44260 60.156 128 46 2 242 368 42 165 8.83e-49 176

Find 204 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAATTCTTGGTCAAAA+TGG 0.154209 7.4:-16980406 MS.gene014142:CDS
CTAGTGCTGGCTGTAATCTT+AGG 0.193223 7.4:-16981711 MS.gene014142:CDS
TTATTGCAGGCGGCTTCTTA+TGG 0.247506 7.4:-16980590 MS.gene014142:CDS
CCGTTAGCATCCACGGAATT+AGG 0.259510 7.4:+16981820 None:intergenic
GAAAGTGATTATTTCTTTAT+CGG 0.262167 7.4:-16981962 MS.gene014142:CDS
GTGAAGCTGCTTCTTGCAGC+AGG 0.273866 7.4:-16981850 MS.gene014142:CDS
AACTGAGATCAAAGAGAAAT+TGG 0.283003 7.4:-16980243 MS.gene014142:CDS
TTCTTATTCTCCTCCTTTGT+CGG 0.292786 7.4:-16981668 MS.gene014142:CDS
CGCGTGCTTATTCCCATGAT+TGG 0.294935 7.4:-16981453 MS.gene014142:CDS
AAAACAGTTGAAGTCAGATT+TGG 0.296997 7.4:+16980716 None:intergenic
ACTTTCTCGGGTCCCTTCTT+CGG 0.297219 7.4:+16981395 None:intergenic
CTTTCTCGGGTCCCTTCTTC+GGG 0.310844 7.4:+16981396 None:intergenic
TACAATGGCCGAAGCTCTTC+AGG 0.319804 7.4:+16981196 None:intergenic
ATCCCAGCCTTGCATCTTCC+TGG 0.322304 7.4:-16980980 MS.gene014142:CDS
AACTCCATGCTTGCAGCTGC+TGG 0.324417 7.4:-16980434 MS.gene014142:CDS
ATCTCAGGTGCTGCGCCAGC+TGG 0.340015 7.4:-16980212 MS.gene014142:CDS
CGGTGGATGAGGTTGGATTA+TGG 0.349552 7.4:-16982074 MS.gene014142:CDS
GCAGCCATGAGCATGTTGCC+TGG 0.353518 7.4:-16981109 MS.gene014142:CDS
TGCTGCGCCAGCTGGTTCCT+CGG 0.353578 7.4:-16980204 MS.gene014142:CDS
CTTCTTCGGGCATTCTCCCC+TGG 0.358679 7.4:+16981409 None:intergenic
CTGGCTCAGTCAATAATTCT+TGG 0.360024 7.4:-16980415 MS.gene014142:CDS
ACAGGCATGCCAACTCATTA+AGG 0.364336 7.4:+16980855 None:intergenic
CGGCCATTGTATGTTTCAAC+TGG 0.366588 7.4:-16981184 MS.gene014142:CDS
AAGAGATCATCAAGATTTGA+TGG 0.375352 7.4:+16980773 None:intergenic
CAATTGACTTCAACTTCAAC+AGG 0.377422 7.4:+16981605 None:intergenic
GTAAGGGTGCTTGCCGGCGC+GGG 0.377691 7.4:-16981339 MS.gene014142:CDS
TCAAGATTTGATGGATTCAA+TGG 0.378043 7.4:+16980782 None:intergenic
CTTGAGCCCATTGGAGAGAT+AGG 0.383762 7.4:+16980527 None:intergenic
TTGTTGCTGTTGATCATAAT+CGG 0.386100 7.4:+16980880 None:intergenic
ATTCCGAATGTATTCTTTCA+AGG 0.389840 7.4:-16981488 MS.gene014142:CDS
CTAGACTGAAGATTACTTCC+AGG 0.391284 7.4:+16980962 None:intergenic
GCTCTTCACTGTGCTGCTTC+CGG 0.395253 7.4:-16981898 MS.gene014142:CDS
GAACTCCCTCTTTCTCCTGC+TGG 0.397305 7.4:-16981583 MS.gene014142:CDS
TATCGGATGTTGATATCAAC+AGG 0.399105 7.4:-16981945 MS.gene014142:CDS
AGATGCAAGGCTGGGATGTT+TGG 0.402195 7.4:+16980986 None:intergenic
CTAATTCCGTGGATGCTAAC+GGG 0.402744 7.4:-16981819 MS.gene014142:CDS
TTCTCCCCTGGATGAACAAA+AGG 0.403658 7.4:+16981421 None:intergenic
GAGGAGCTACTTCAAATTGA+TGG 0.405740 7.4:-16981736 MS.gene014142:CDS
GATCATCTTCATTTGAGCTT+GGG 0.407859 7.4:-16980322 MS.gene014142:CDS
ACCGATAGTTAAGTGATTCA+TGG 0.410974 7.4:+16982185 None:intergenic
TGTTGATCATCATTTATTGC+AGG 0.414822 7.4:-16980603 MS.gene014142:CDS
GCCAGCTGGTTCCTCGGGTG+AGG 0.415311 7.4:-16980198 MS.gene014142:CDS
TGTCGGCTTCACCTGAGAAC+GGG 0.415939 7.4:-16981651 MS.gene014142:CDS
TGAAGCTGCTTCTTGCAGCA+GGG 0.417923 7.4:-16981849 MS.gene014142:CDS
TGATTCATGGTGTGGTTTCT+CGG 0.418912 7.4:+16982198 None:intergenic
TTTCACACAACTCTGTTGCT+TGG 0.421951 7.4:-16981015 MS.gene014142:CDS
CAATAATTCTTGGTCAAAAT+GGG 0.422094 7.4:-16980405 MS.gene014142:CDS
GTCTGTTGATCATGCTGTAT+TGG 0.422918 7.4:-16980150 MS.gene014142:CDS
TCTGTTGATCATGCTGTATT+GGG 0.426592 7.4:-16980149 MS.gene014142:CDS
TCTTATGGTGTTCAGCCATC+AGG 0.430030 7.4:-16980575 MS.gene014142:CDS
GCCCAATCCAACTTACCATT+GGG 0.431247 7.4:+16980377 None:intergenic
AAGGGCATTCAGTCCAATCA+TGG 0.433719 7.4:+16981440 None:intergenic
CAGCTGTAGTGATACTTTCT+CGG 0.440024 7.4:+16981382 None:intergenic
GCTGCGCCAGCTGGTTCCTC+GGG 0.442943 7.4:-16980203 MS.gene014142:CDS
GACTGCACCCATGATAAATC+AGG 0.445095 7.4:+16980284 None:intergenic
AATTTCTCTTTGATCTCAGT+TGG 0.445539 7.4:+16980245 None:intergenic
CGTGGAGACATTCTTCCTGA+TGG 0.449642 7.4:+16980560 None:intergenic
ACTCCACCCATGTCACCTTC+TGG 0.450662 7.4:-16981046 MS.gene014142:CDS
TTCACTGTGCTGCTTCCGGT+GGG 0.454176 7.4:-16981894 MS.gene014142:CDS
GGCAAAGAAGCAAACTCTCC+TGG 0.456158 7.4:+16981225 None:intergenic
CCCCAATGGTAAGTTGGATT+GGG 0.458669 7.4:-16980378 MS.gene014142:CDS
CTTCCAGGAAGATGCAAGGC+TGG 0.462334 7.4:+16980977 None:intergenic
TGAGCAAAGGACGCCGTTGA+TGG 0.464569 7.4:-16982016 MS.gene014142:CDS
TCAGGAAGGGATGGATCAAC+AGG 0.466570 7.4:+16981541 None:intergenic
CAAGCACCCTTACGAAAATC+AGG 0.467829 7.4:+16981349 None:intergenic
GACATCGAAGAAGGTGAGCC+AGG 0.468116 7.4:+16981091 None:intergenic
AGATCATCTTCATTTGAGCT+TGG 0.468995 7.4:-16980323 MS.gene014142:CDS
TAGTGCTGGCTGTAATCTTA+GGG 0.470828 7.4:-16981710 MS.gene014142:CDS
TTCAACTTCAACAGGAGATC+CGG 0.470845 7.4:+16981613 None:intergenic
AATTAATATGACGTGGAGAC+AGG 0.471650 7.4:+16980837 None:intergenic
TTGTCGGCTTCACCTGAGAA+CGG 0.475746 7.4:-16981652 MS.gene014142:CDS
AGGACGGTACAAATTGTTCC+AGG 0.478546 7.4:-16981243 MS.gene014142:CDS
AATGAATATGAGCACACAAA+TGG 0.478801 7.4:-16980174 MS.gene014142:CDS
GCGAGGAGCCTGATTTATCA+TGG 0.480265 7.4:-16980292 MS.gene014142:CDS
AGGAGATCCGGTGGTGGAGA+AGG 0.485489 7.4:+16981625 None:intergenic
GGAGAAGGAGACCCGTTCTC+AGG 0.488091 7.4:+16981640 None:intergenic
CTTCACTGTGCTGCTTCCGG+TGG 0.492217 7.4:-16981895 MS.gene014142:CDS
GGTGACATGGGTGGAGTGAA+TGG 0.492460 7.4:+16981052 None:intergenic
GTCAAGCACGTCTTCTGCCA+TGG 0.494988 7.4:-16981140 MS.gene014142:CDS
AAATTGGCAACTTCCATCTC+AGG 0.496278 7.4:-16980227 MS.gene014142:CDS
TGAGCCAGCAGCTGCAAGCA+TGG 0.498255 7.4:+16980430 None:intergenic
CCAGCTGGTTCCTCGGGTGA+GGG 0.498286 7.4:-16980197 MS.gene014142:CDS
AGCTGGCGCAGCACCTGAGA+TGG 0.500158 7.4:+16980214 None:intergenic
AGCCCAATCCAACTTACCAT+TGG 0.500923 7.4:+16980376 None:intergenic
CAATGCTAGAGATATTCATA+TGG 0.504807 7.4:-16980921 MS.gene014142:CDS
CCCACACTCCTGAAGAGCTT+CGG 0.505759 7.4:-16981204 MS.gene014142:CDS
CCAACCTCATCCACCGATGT+AGG 0.509535 7.4:+16982081 None:intergenic
TTGATGGTTGCTGCTACATA+TGG 0.511142 7.4:-16982000 MS.gene014142:CDS
TGTACCGTCCTTGCAGAGAC+GGG 0.511148 7.4:+16981255 None:intergenic
CAGGGGAGAATGCCCGAAGA+AGG 0.515191 7.4:-16981408 MS.gene014142:CDS
GTGGAACCTATCTCTCCAAT+GGG 0.516161 7.4:-16980533 MS.gene014142:CDS
TCAGATCCAGCAGGAGAAAG+AGG 0.517866 7.4:+16981577 None:intergenic
CAAATTGATGGTCCTAGTGC+TGG 0.518193 7.4:-16981724 MS.gene014142:CDS
AGCTGTAGTGATACTTTCTC+GGG 0.519357 7.4:+16981383 None:intergenic
TGAGAATTGTGTGTCGAAGT+TGG 0.520178 7.4:+16982222 None:intergenic
GGACCTTGAAAGAATACATT+CGG 0.520381 7.4:+16981485 None:intergenic
CCCTCACCCGAGGAACCAGC+TGG 0.525483 7.4:+16980197 None:intergenic
GAGATAGGTTCCACGTTTCG+TGG 0.525659 7.4:+16980542 None:intergenic
TCTTTCTTCTCAGATCCAGC+AGG 0.526498 7.4:+16981568 None:intergenic
GACATGTGTGAATATGCTCA+TGG 0.527602 7.4:-16981316 MS.gene014142:CDS
CGTAAGGGTGCTTGCCGGCG+CGG 0.530669 7.4:-16981340 MS.gene014142:CDS
CTATCTCTCCAATGGGCTCA+AGG 0.530752 7.4:-16980526 MS.gene014142:CDS
ATTGACATCCTTGAGCCCAT+TGG 0.533162 7.4:+16980518 None:intergenic
CGGGTCTCCTTCTCCACCAC+CGG 0.535005 7.4:-16981632 MS.gene014142:CDS
TGATCCTACATCGGTGGATG+AGG 0.535909 7.4:-16982085 MS.gene014142:CDS
GAAGCTGCTTCTTGCAGCAG+GGG 0.537195 7.4:-16981848 MS.gene014142:CDS
CCTACATCGGTGGATGAGGT+TGG 0.537476 7.4:-16982081 MS.gene014142:CDS
AAGACAGCTGATTTGTGAGT+CGG 0.538872 7.4:+16980689 None:intergenic
CCTAATTCCGTGGATGCTAA+CGG 0.540668 7.4:-16981820 MS.gene014142:CDS
CTAAGATTACAGCCAGCACT+AGG 0.544045 7.4:+16981712 None:intergenic
TCATTTGAGCTTGGGAACAA+TGG 0.545835 7.4:-16980314 MS.gene014142:CDS
CGTGGAACCTATCTCTCCAA+TGG 0.547113 7.4:-16980534 MS.gene014142:CDS
GGGCTCAAGGATGTCAATGC+TGG 0.547672 7.4:-16980513 MS.gene014142:CDS
GCCGAAGCTCTTCAGGAGTG+TGG 0.548910 7.4:+16981203 None:intergenic
TAGTTAAGTGATTCATGGTG+TGG 0.551522 7.4:+16982190 None:intergenic
AGACGGGTTCTATATTGTGC+AGG 0.553860 7.4:+16981271 None:intergenic
GATGAGGTTGGATTATGGTA+TGG 0.556471 7.4:-16982069 MS.gene014142:CDS
ATTCAATGGCTTCATTCGAC+CGG 0.556611 7.4:+16980796 None:intergenic
ACCATGAATCACTTAACTAT+CGG 0.558236 7.4:-16982186 MS.gene014142:CDS
CCCATGTCACCTTCTGGCAA+TGG 0.558647 7.4:-16981040 MS.gene014142:CDS
TGGGAATAAGCACGCGAACA+AGG 0.559628 7.4:+16981460 None:intergenic
ACATGTGTGAATATGCTCAT+GGG 0.562526 7.4:-16981315 MS.gene014142:CDS
TTCCAGGAAGATGCAAGGCT+GGG 0.563396 7.4:+16980978 None:intergenic
TAAGGGTGCTTGCCGGCGCG+GGG 0.564739 7.4:-16981338 MS.gene014142:CDS
TTGTACCGTCCTTGCAGAGA+CGG 0.564971 7.4:+16981254 None:intergenic
AGCCTAAGCTTCCGCGAGCA+CGG 0.565872 7.4:-16980461 MS.gene014142:CDS
AGCCGTGCTCGCGGAAGCTT+AGG 0.568886 7.4:+16980459 None:intergenic
GACATGACAGACATCGAAGA+AGG 0.569249 7.4:+16981082 None:intergenic
AGGGGAGAATGCCCGAAGAA+GGG 0.570703 7.4:-16981407 MS.gene014142:CDS
GAATAAACAATAACATCTAA+CGG 0.574687 7.4:+16981790 None:intergenic
CATGGCTGCAGCAAAATCCA+TGG 0.577281 7.4:+16981123 None:intergenic
CCCTTACGAAAATCAGGACA+AGG 0.579234 7.4:+16981355 None:intergenic
CTGCTAATAACGACGTGGAA+GGG 0.580572 7.4:-16982128 MS.gene014142:CDS
CAGATCCAGCAGGAGAAAGA+GGG 0.581890 7.4:+16981578 None:intergenic
ACGATCCCCGTTAGCATCCA+CGG 0.582142 7.4:+16981813 None:intergenic
GTATGTTTCAACTGGTTCTG+CGG 0.583036 7.4:-16981176 MS.gene014142:CDS
AGGGCATTCAGTCCAATCAT+GGG 0.584059 7.4:+16981441 None:intergenic
TGAGCCAGGCAACATGCTCA+TGG 0.584222 7.4:+16981105 None:intergenic
GACGTGCTTGACCGAGGTGA+GGG 0.585321 7.4:+16981151 None:intergenic
TTCAACAGGAGATCCGGTGG+TGG 0.585729 7.4:+16981619 None:intergenic
CCGAAGCTCTTCAGGAGTGT+GGG 0.587103 7.4:+16981204 None:intergenic
GCAACAACTCCTTAATGAGT+TGG 0.589263 7.4:-16980864 MS.gene014142:CDS
TCTCCCCTGGATGAACAAAA+GGG 0.590156 7.4:+16981422 None:intergenic
GAAGAGCAGTGCTCTTGTCA+AGG 0.590240 7.4:+16981914 None:intergenic
TTATGGTATGGTCGTCGCAA+GGG 0.590907 7.4:-16982057 MS.gene014142:CDS
GTTCTGCGGTTCCCTCACCT+CGG 0.594015 7.4:-16981162 MS.gene014142:CDS
CGAGGAGCCTGATTTATCAT+GGG 0.594503 7.4:-16980291 MS.gene014142:CDS
ATTATGGTATGGTCGTCGCA+AGG 0.597308 7.4:-16982058 MS.gene014142:CDS
GTGCTCTTGTCAAGGCCACA+AGG 0.598467 7.4:+16981922 None:intergenic
TATTAGCAGCAAGCTCAAGA+AGG 0.599518 7.4:+16982142 None:intergenic
ATCATGCTGTATTGGGAACA+TGG 0.599645 7.4:-16980142 MS.gene014142:CDS
AGACGTGCTTGACCGAGGTG+AGG 0.601319 7.4:+16981150 None:intergenic
GCTCAAATGAAGATGATCTA+CGG 0.601438 7.4:+16980327 None:intergenic
GACGGAGATGAAGACGGCAC+AGG 0.602727 7.4:+16982252 None:intergenic
GCTGCTAATAACGACGTGGA+AGG 0.603136 7.4:-16982129 MS.gene014142:CDS
TTCTCAGGTGAAGCCGACAA+AGG 0.603590 7.4:+16981655 None:intergenic
AAGAATGTCTCCACGAAACG+TGG 0.605224 7.4:-16980552 MS.gene014142:CDS
TCTAACAGTCTTAGCCGCTC+CGG 0.606773 7.4:-16980815 MS.gene014142:CDS
GCCATTGCCAGAAGGTGACA+TGG 0.611555 7.4:+16981039 None:intergenic
CTGTTAGAATTAATATGACG+TGG 0.612704 7.4:+16980830 None:intergenic
ATATAGAACCCGTCTCTGCA+AGG 0.614108 7.4:-16981263 MS.gene014142:CDS
ATTCACACATGTCCCCGCGC+CGG 0.614297 7.4:+16981326 None:intergenic
TGATCATCATTTATTGCAGG+CGG 0.614691 7.4:-16980600 MS.gene014142:CDS
TATGTAGCAGCAACCATCAA+CGG 0.614726 7.4:+16982003 None:intergenic
GTTGATATCAACAGGCCTTG+TGG 0.614945 7.4:-16981937 MS.gene014142:CDS
TGGAGTTAGAGCCGTGCTCG+CGG 0.616438 7.4:+16980450 None:intergenic
AGCAGATGGTCAATGAGCAA+AGG 0.617799 7.4:-16982029 MS.gene014142:CDS
ATATCGAGGAGAAGAACTCT+CGG 0.618533 7.4:+16980745 None:intergenic
AATAAGCACGCGAACAAGGT+CGG 0.619335 7.4:+16981464 None:intergenic
AAGGCTGGGATGTTTGGCTG+AGG 0.620227 7.4:+16980992 None:intergenic
TAATTCCGTGGATGCTAACG+GGG 0.620451 7.4:-16981818 MS.gene014142:CDS
GCTCACAATGCGGATGATGT+TGG 0.621854 7.4:-16980356 MS.gene014142:CDS
TCACTGTGCTGCTTCCGGTG+GGG 0.621976 7.4:-16981893 MS.gene014142:CDS
ATGGGTGGAGTGAATGGTGA+AGG 0.622440 7.4:+16981058 None:intergenic
GATGCAGCTTGATCATCTTG+TGG 0.622855 7.4:-16980111 MS.gene014142:CDS
CCAATCCAACTTACCATTGG+GGG 0.626687 7.4:+16980379 None:intergenic
TTGCCAGAAGGTGACATGGG+TGG 0.627061 7.4:+16981043 None:intergenic
TCAGGTGAAGCCGACAAAGG+AGG 0.632119 7.4:+16981658 None:intergenic
CCCAATCCAACTTACCATTG+GGG 0.638578 7.4:+16980378 None:intergenic
GATAGAGACGGAGATGAAGA+CGG 0.638842 7.4:+16982246 None:intergenic
TCGCAAGGGATCGAAGCAGA+TGG 0.641118 7.4:-16982043 MS.gene014142:CDS
AGAACCCGTCTCTGCAAGGA+CGG 0.642420 7.4:-16981259 MS.gene014142:CDS
TGAAAGGATGTGCTGTGAGT+CGG 0.642861 7.4:-16982286 None:intergenic
AACTTCAACAGGAGATCCGG+TGG 0.644927 7.4:+16981616 None:intergenic
GTCGAAGTTGGAGATAGAGA+CGG 0.650421 7.4:+16982234 None:intergenic
CATGTGTGAATATGCTCATG+GGG 0.652271 7.4:-16981314 MS.gene014142:CDS
GCAGAAGACGTGCTTGACCG+AGG 0.653400 7.4:+16981145 None:intergenic
TTTCACAAGTTCAAGCTTCG+GGG 0.656993 7.4:+16981768 None:intergenic
TGAGCTTGGGAACAATGGCG+AGG 0.658801 7.4:-16980309 MS.gene014142:CDS
TGTGAAATGCCATTGCCAGA+AGG 0.659354 7.4:+16981031 None:intergenic
ATTACTTCCAGGAAGATGCA+AGG 0.661108 7.4:+16980973 None:intergenic
AAGGATGTGCTGTGAGTCGG+AGG 0.661354 7.4:-16982283 None:intergenic
AGGGGCTGATCCTAATTCCG+TGG 0.663243 7.4:-16981830 MS.gene014142:CDS
ATGGCTTCATTCGACCGGAG+CGG 0.667016 7.4:+16980801 None:intergenic
CATATTCATTCCCTCACCCG+AGG 0.676171 7.4:+16980187 None:intergenic
GAACCAGTTGAAACATACAA+TGG 0.685763 7.4:+16981181 None:intergenic
TGAGTATGATCCTACATCGG+TGG 0.686854 7.4:-16982091 MS.gene014142:CDS
AGATTTGGATCAGCATATCG+AGG 0.694701 7.4:+16980731 None:intergenic
GTTGGATTGGGCTCACAATG+CGG 0.696691 7.4:-16980366 MS.gene014142:CDS
GATTGAGTATGATCCTACAT+CGG 0.700321 7.4:-16982094 MS.gene014142:CDS
CCATTGCCAGAAGGTGACAT+GGG 0.719317 7.4:+16981040 None:intergenic
CCTTACGAAAATCAGGACAA+GGG 0.730105 7.4:+16981356 None:intergenic
GCTTGCTGCTAATAACGACG+TGG 0.738667 7.4:-16982133 MS.gene014142:CDS
AGGATGTGCTGTGAGTCGGA+GGG 0.739091 7.4:-16982282 MS.gene014142:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAAACAATAACATCTAA+CGG + chr7.4:16980589-16980608 None:intergenic 20.0%
!!! GAAAGTGATTATTTCTTTAT+CGG - chr7.4:16980414-16980433 MS.gene014142:CDS 20.0%
! CAATAATTCTTGGTCAAAAT+GGG - chr7.4:16981971-16981990 MS.gene014142:CDS 25.0%
! GAAGAAAAATTTGTATTCAC+TGG + chr7.4:16981747-16981766 None:intergenic 25.0%
! TCAATAATTCTTGGTCAAAA+TGG - chr7.4:16981970-16981989 MS.gene014142:CDS 25.0%
AAAACAGTTGAAGTCAGATT+TGG + chr7.4:16981663-16981682 None:intergenic 30.0%
AACTGAGATCAAAGAGAAAT+TGG - chr7.4:16982133-16982152 MS.gene014142:CDS 30.0%
AAGAGATCATCAAGATTTGA+TGG + chr7.4:16981606-16981625 None:intergenic 30.0%
AATGAATATGAGCACACAAA+TGG - chr7.4:16982202-16982221 MS.gene014142:CDS 30.0%
AATTTCTCTTTGATCTCAGT+TGG + chr7.4:16982134-16982153 None:intergenic 30.0%
ACCATGAATCACTTAACTAT+CGG - chr7.4:16980190-16980209 MS.gene014142:CDS 30.0%
ATTCCGAATGTATTCTTTCA+AGG - chr7.4:16980888-16980907 MS.gene014142:CDS 30.0%
CAATGCTAGAGATATTCATA+TGG - chr7.4:16981455-16981474 MS.gene014142:CDS 30.0%
CTGTTAGAATTAATATGACG+TGG + chr7.4:16981549-16981568 None:intergenic 30.0%
TGTTGATCATCATTTATTGC+AGG - chr7.4:16981773-16981792 MS.gene014142:CDS 30.0%
! TTGTTGCTGTTGATCATAAT+CGG + chr7.4:16981499-16981518 None:intergenic 30.0%
! TTTTTCACAAGTTCAAGCTT+CGG + chr7.4:16980613-16980632 None:intergenic 30.0%
!! TCAAGATTTGATGGATTCAA+TGG + chr7.4:16981597-16981616 None:intergenic 30.0%
!!! TATATGCTGTTTTTGATGTC+AGG + chr7.4:16980856-16980875 None:intergenic 30.0%
AATTAATATGACGTGGAGAC+AGG + chr7.4:16981542-16981561 None:intergenic 35.0%
ACATGTGTGAATATGCTCAT+GGG - chr7.4:16981061-16981080 MS.gene014142:CDS 35.0%
ACCGATAGTTAAGTGATTCA+TGG + chr7.4:16980194-16980213 None:intergenic 35.0%
ACTTGTGAAAAACAGTCTTG+AGG - chr7.4:16980621-16980640 MS.gene014142:CDS 35.0%
AGATCATCTTCATTTGAGCT+TGG - chr7.4:16982053-16982072 MS.gene014142:CDS 35.0%
GAACCAGTTGAAACATACAA+TGG + chr7.4:16981198-16981217 None:intergenic 35.0%
GATCATCTTCATTTGAGCTT+GGG - chr7.4:16982054-16982073 MS.gene014142:CDS 35.0%
GATTGAGTATGATCCTACAT+CGG - chr7.4:16980282-16980301 MS.gene014142:CDS 35.0%
GCTCAAATGAAGATGATCTA+CGG + chr7.4:16982052-16982071 None:intergenic 35.0%
GGACCTTGAAAGAATACATT+CGG + chr7.4:16980894-16980913 None:intergenic 35.0%
TAGTTAAGTGATTCATGGTG+TGG + chr7.4:16980189-16980208 None:intergenic 35.0%
TATCGGATGTTGATATCAAC+AGG - chr7.4:16980431-16980450 MS.gene014142:CDS 35.0%
TCTGTTGATCATGCTGTATT+GGG - chr7.4:16982227-16982246 MS.gene014142:CDS 35.0%
TGATCATCATTTATTGCAGG+CGG - chr7.4:16981776-16981795 MS.gene014142:CDS 35.0%
TTCTTATTCTCCTCCTTTGT+CGG - chr7.4:16980708-16980727 MS.gene014142:CDS 35.0%
! CAATTGACTTCAACTTCAAC+AGG + chr7.4:16980774-16980793 None:intergenic 35.0%
! TTTTCACAAGTTCAAGCTTC+GGG + chr7.4:16980612-16980631 None:intergenic 35.0%
AAATTGGCAACTTCCATCTC+AGG - chr7.4:16982149-16982168 MS.gene014142:CDS 40.0%
AGATTTGGATCAGCATATCG+AGG + chr7.4:16981648-16981667 None:intergenic 40.0%
AGCTGTAGTGATACTTTCTC+GGG + chr7.4:16980996-16981015 None:intergenic 40.0%
ATATCGAGGAGAAGAACTCT+CGG + chr7.4:16981634-16981653 None:intergenic 40.0%
ATCATGCTGTATTGGGAACA+TGG - chr7.4:16982234-16982253 MS.gene014142:CDS 40.0%
ATTACTTCCAGGAAGATGCA+AGG + chr7.4:16981406-16981425 None:intergenic 40.0%
ATTCAATGGCTTCATTCGAC+CGG + chr7.4:16981583-16981602 None:intergenic 40.0%
CAGCTGTAGTGATACTTTCT+CGG + chr7.4:16980997-16981016 None:intergenic 40.0%
CATGTGTGAATATGCTCATG+GGG - chr7.4:16981062-16981081 MS.gene014142:CDS 40.0%
CCTTACGAAAATCAGGACAA+GGG + chr7.4:16981023-16981042 None:intergenic 40.0%
CTAGACTGAAGATTACTTCC+AGG + chr7.4:16981417-16981436 None:intergenic 40.0%
CTGGCTCAGTCAATAATTCT+TGG - chr7.4:16981961-16981980 MS.gene014142:CDS 40.0%
GACATGTGTGAATATGCTCA+TGG - chr7.4:16981060-16981079 MS.gene014142:CDS 40.0%
GAGGAGCTACTTCAAATTGA+TGG - chr7.4:16980640-16980659 MS.gene014142:CDS 40.0%
GATGAGGTTGGATTATGGTA+TGG - chr7.4:16980307-16980326 MS.gene014142:CDS 40.0%
GCAACAACTCCTTAATGAGT+TGG - chr7.4:16981512-16981531 MS.gene014142:CDS 40.0%
GTCTGTTGATCATGCTGTAT+TGG - chr7.4:16982226-16982245 MS.gene014142:CDS 40.0%
TATGTAGCAGCAACCATCAA+CGG + chr7.4:16980376-16980395 None:intergenic 40.0%
TATTAGCAGCAAGCTCAAGA+AGG + chr7.4:16980237-16980256 None:intergenic 40.0%
TCATTTGAGCTTGGGAACAA+TGG - chr7.4:16982062-16982081 MS.gene014142:CDS 40.0%
TGAGAATTGTGTGTCGAAGT+TGG + chr7.4:16980157-16980176 None:intergenic 40.0%
TGATTCATGGTGTGGTTTCT+CGG + chr7.4:16980181-16980200 None:intergenic 40.0%
TTCAACTTCAACAGGAGATC+CGG + chr7.4:16980766-16980785 None:intergenic 40.0%
TTTCACAAGTTCAAGCTTCG+GGG + chr7.4:16980611-16980630 None:intergenic 40.0%
TTTCACACAACTCTGTTGCT+TGG - chr7.4:16981361-16981380 MS.gene014142:CDS 40.0%
! AATGCCCTTTTGTTCATCCA+GGG - chr7.4:16980950-16980969 MS.gene014142:CDS 40.0%
! CCTTGTCCTGATTTTCGTAA+GGG - chr7.4:16981021-16981040 MS.gene014142:CDS 40.0%
! TTGATGGTTGCTGCTACATA+TGG - chr7.4:16980376-16980395 MS.gene014142:CDS 40.0%
! TTTTTGATGTCAGGAAGGGA+TGG + chr7.4:16980847-16980866 None:intergenic 40.0%
!! AAGACAGCTGATTTGTGAGT+CGG + chr7.4:16981690-16981709 None:intergenic 40.0%
!! GTATGTTTCAACTGGTTCTG+CGG - chr7.4:16981200-16981219 MS.gene014142:CDS 40.0%
!! TAGTGCTGGCTGTAATCTTA+GGG - chr7.4:16980666-16980685 MS.gene014142:CDS 40.0%
!!! GCTGTTTTTGATGTCAGGAA+GGG + chr7.4:16980851-16980870 None:intergenic 40.0%
!!! TGCTGTTTTTGATGTCAGGA+AGG + chr7.4:16980852-16980871 None:intergenic 40.0%
AAGAATGTCTCCACGAAACG+TGG - chr7.4:16981824-16981843 MS.gene014142:CDS 45.0%
AATAAGCACGCGAACAAGGT+CGG + chr7.4:16980915-16980934 None:intergenic 45.0%
ACAGGCATGCCAACTCATTA+AGG + chr7.4:16981524-16981543 None:intergenic 45.0%
AGCAGATGGTCAATGAGCAA+AGG - chr7.4:16980347-16980366 MS.gene014142:CDS 45.0%
AGCCCAATCCAACTTACCAT+TGG + chr7.4:16982003-16982022 None:intergenic 45.0%
AGGACGGTACAAATTGTTCC+AGG - chr7.4:16981133-16981152 MS.gene014142:CDS 45.0%
ATATAGAACCCGTCTCTGCA+AGG - chr7.4:16981113-16981132 MS.gene014142:CDS 45.0%
ATTATGGTATGGTCGTCGCA+AGG - chr7.4:16980318-16980337 MS.gene014142:CDS 45.0%
ATTGACATCCTTGAGCCCAT+TGG + chr7.4:16981861-16981880 None:intergenic 45.0%
CAAGCACCCTTACGAAAATC+AGG + chr7.4:16981030-16981049 None:intergenic 45.0%
CCAATCCAACTTACCATTGG+GGG + chr7.4:16982000-16982019 None:intergenic 45.0%
CCCAATCCAACTTACCATTG+GGG + chr7.4:16982001-16982020 None:intergenic 45.0%
CCCTTACGAAAATCAGGACA+AGG + chr7.4:16981024-16981043 None:intergenic 45.0%
CCTAATTCCGTGGATGCTAA+CGG - chr7.4:16980556-16980575 MS.gene014142:CDS 45.0%
CGAGGAGCCTGATTTATCAT+GGG - chr7.4:16982085-16982104 MS.gene014142:CDS 45.0%
CGGCCATTGTATGTTTCAAC+TGG - chr7.4:16981192-16981211 MS.gene014142:CDS 45.0%
CTAAGATTACAGCCAGCACT+AGG + chr7.4:16980667-16980686 None:intergenic 45.0%
CTAATTCCGTGGATGCTAAC+GGG - chr7.4:16980557-16980576 MS.gene014142:CDS 45.0%
CTGCTAATAACGACGTGGAA+GGG - chr7.4:16980248-16980267 MS.gene014142:CDS 45.0%
GACATGACAGACATCGAAGA+AGG + chr7.4:16981297-16981316 None:intergenic 45.0%
GACTGCACCCATGATAAATC+AGG + chr7.4:16982095-16982114 None:intergenic 45.0%
GATAGAGACGGAGATGAAGA+CGG + chr7.4:16980133-16980152 None:intergenic 45.0%
GATGCAGCTTGATCATCTTG+TGG - chr7.4:16982265-16982284 MS.gene014142:CDS 45.0%
GCCCAATCCAACTTACCATT+GGG + chr7.4:16982002-16982021 None:intergenic 45.0%
GTCGAAGTTGGAGATAGAGA+CGG + chr7.4:16980145-16980164 None:intergenic 45.0%
GTGGAACCTATCTCTCCAAT+GGG - chr7.4:16981843-16981862 MS.gene014142:CDS 45.0%
GTTGATATCAACAGGCCTTG+TGG - chr7.4:16980439-16980458 MS.gene014142:CDS 45.0%
TAATTCCGTGGATGCTAACG+GGG - chr7.4:16980558-16980577 MS.gene014142:CDS 45.0%
TCAAAATGGGAATCCCCCAA+TGG - chr7.4:16981984-16982003 MS.gene014142:CDS 45.0%
TCTCCCCTGGATGAACAAAA+GGG + chr7.4:16980957-16980976 None:intergenic 45.0%
TCTTATGGTGTTCAGCCATC+AGG - chr7.4:16981801-16981820 MS.gene014142:CDS 45.0%
TCTTTCTTCTCAGATCCAGC+AGG + chr7.4:16980811-16980830 None:intergenic 45.0%
TGAGTATGATCCTACATCGG+TGG - chr7.4:16980285-16980304 MS.gene014142:CDS 45.0%
TGTGAAATGCCATTGCCAGA+AGG + chr7.4:16981348-16981367 None:intergenic 45.0%
TTATGGTATGGTCGTCGCAA+GGG - chr7.4:16980319-16980338 MS.gene014142:CDS 45.0%
TTATTGCAGGCGGCTTCTTA+TGG - chr7.4:16981786-16981805 MS.gene014142:CDS 45.0%
TTCTCCCCTGGATGAACAAA+AGG + chr7.4:16980958-16980977 None:intergenic 45.0%
! AGACGGGTTCTATATTGTGC+AGG + chr7.4:16981108-16981127 None:intergenic 45.0%
! AGGGCATTCAGTCCAATCAT+GGG + chr7.4:16980938-16980957 None:intergenic 45.0%
! ATGCCCTTTTGTTCATCCAG+GGG - chr7.4:16980951-16980970 MS.gene014142:CDS 45.0%
! CAAATTGATGGTCCTAGTGC+TGG - chr7.4:16980652-16980671 MS.gene014142:CDS 45.0%
! CCCCAATGGTAAGTTGGATT+GGG - chr7.4:16981998-16982017 MS.gene014142:CDS 45.0%
! CCCTTGTCCTGATTTTCGTA+AGG - chr7.4:16981020-16981039 MS.gene014142:CDS 45.0%
! GAATGCCCTTTTGTTCATCC+AGG - chr7.4:16980949-16980968 MS.gene014142:CDS 45.0%
!! AAGGGCATTCAGTCCAATCA+TGG + chr7.4:16980939-16980958 None:intergenic 45.0%
!! CTAGTGCTGGCTGTAATCTT+AGG - chr7.4:16980665-16980684 MS.gene014142:CDS 45.0%
!!! ATTTTCGTAAGGGTGCTTGC+CGG - chr7.4:16981031-16981050 MS.gene014142:CDS 45.0%
AACTTCAACAGGAGATCCGG+TGG + chr7.4:16980763-16980782 None:intergenic 50.0%
ACTTTCTCGGGTCCCTTCTT+CGG + chr7.4:16980984-16981003 None:intergenic 50.0%
AGATGCAAGGCTGGGATGTT+TGG + chr7.4:16981393-16981412 None:intergenic 50.0%
ATGGGTGGAGTGAATGGTGA+AGG + chr7.4:16981321-16981340 None:intergenic 50.0%
CAGATCCAGCAGGAGAAAGA+GGG + chr7.4:16980801-16980820 None:intergenic 50.0%
CATATTCATTCCCTCACCCG+AGG + chr7.4:16982192-16982211 None:intergenic 50.0%
CATGGCTGCAGCAAAATCCA+TGG + chr7.4:16981256-16981275 None:intergenic 50.0%
CCATTGCCAGAAGGTGACAT+GGG + chr7.4:16981339-16981358 None:intergenic 50.0%
CCGTTAGCATCCACGGAATT+AGG + chr7.4:16980559-16980578 None:intergenic 50.0%
CGCGTGCTTATTCCCATGAT+TGG - chr7.4:16980923-16980942 MS.gene014142:CDS 50.0%
CGGTGGATGAGGTTGGATTA+TGG - chr7.4:16980302-16980321 MS.gene014142:CDS 50.0%
CGTGGAACCTATCTCTCCAA+TGG - chr7.4:16981842-16981861 MS.gene014142:CDS 50.0%
CGTGGAGACATTCTTCCTGA+TGG + chr7.4:16981819-16981838 None:intergenic 50.0%
CTTGAGCCCATTGGAGAGAT+AGG + chr7.4:16981852-16981871 None:intergenic 50.0%
GAAGAGCAGTGCTCTTGTCA+AGG + chr7.4:16980465-16980484 None:intergenic 50.0%
GAGATAGGTTCCACGTTTCG+TGG + chr7.4:16981837-16981856 None:intergenic 50.0%
GCGAGGAGCCTGATTTATCA+TGG - chr7.4:16982084-16982103 MS.gene014142:CDS 50.0%
GCTCACAATGCGGATGATGT+TGG - chr7.4:16982020-16982039 MS.gene014142:CDS 50.0%
GCTGCTAATAACGACGTGGA+AGG - chr7.4:16980247-16980266 MS.gene014142:CDS 50.0%
GGAATCCCCCAATGGTAAGT+TGG - chr7.4:16981992-16982011 MS.gene014142:CDS 50.0%
GGCAAAGAAGCAAACTCTCC+TGG + chr7.4:16981154-16981173 None:intergenic 50.0%
TACAATGGCCGAAGCTCTTC+AGG + chr7.4:16981183-16981202 None:intergenic 50.0%
TCAGATCCAGCAGGAGAAAG+AGG + chr7.4:16980802-16980821 None:intergenic 50.0%
TCAGGAAGGGATGGATCAAC+AGG + chr7.4:16980838-16980857 None:intergenic 50.0%
TCTAACAGTCTTAGCCGCTC+CGG - chr7.4:16981561-16981580 MS.gene014142:CDS 50.0%
TGAAGCTGCTTCTTGCAGCA+GGG - chr7.4:16980527-16980546 MS.gene014142:CDS 50.0%
TGATCCTACATCGGTGGATG+AGG - chr7.4:16980291-16980310 MS.gene014142:CDS 50.0%
TGGGAATAAGCACGCGAACA+AGG + chr7.4:16980919-16980938 None:intergenic 50.0%
TTCCAGGAAGATGCAAGGCT+GGG + chr7.4:16981401-16981420 None:intergenic 50.0%
TTCTCAGGTGAAGCCGACAA+AGG + chr7.4:16980724-16980743 None:intergenic 50.0%
TTGTACCGTCCTTGCAGAGA+CGG + chr7.4:16981125-16981144 None:intergenic 50.0%
! AACAGCATTTTCAGCCCCAC+CGG + chr7.4:16980500-16980519 None:intergenic 50.0%
! CCCCCAATGGTAAGTTGGAT+TGG - chr7.4:16981997-16982016 MS.gene014142:CDS 50.0%
! CTATCTCTCCAATGGGCTCA+AGG - chr7.4:16981850-16981869 MS.gene014142:CDS 50.0%
! GCTTGCTGCTAATAACGACG+TGG - chr7.4:16980243-16980262 MS.gene014142:CDS 50.0%
! GTTGGATTGGGCTCACAATG+CGG - chr7.4:16982010-16982029 MS.gene014142:CDS 50.0%
!! TTGTCGGCTTCACCTGAGAA+CGG - chr7.4:16980724-16980743 MS.gene014142:CDS 50.0%
AACTCCATGCTTGCAGCTGC+TGG - chr7.4:16981942-16981961 MS.gene014142:CDS 55.0%
AAGGCTGGGATGTTTGGCTG+AGG + chr7.4:16981387-16981406 None:intergenic 55.0%
ACGATCCCCGTTAGCATCCA+CGG + chr7.4:16980566-16980585 None:intergenic 55.0%
ACTCCACCCATGTCACCTTC+TGG - chr7.4:16981330-16981349 MS.gene014142:CDS 55.0%
AGAACCCGTCTCTGCAAGGA+CGG - chr7.4:16981117-16981136 MS.gene014142:CDS 55.0%
AGGGGAGAATGCCCGAAGAA+GGG - chr7.4:16980969-16980988 MS.gene014142:CDS 55.0%
AGGGGCTGATCCTAATTCCG+TGG - chr7.4:16980546-16980565 MS.gene014142:CDS 55.0%
ATCCCAGCCTTGCATCTTCC+TGG - chr7.4:16981396-16981415 MS.gene014142:CDS 55.0%
ATGGCTTCATTCGACCGGAG+CGG + chr7.4:16981578-16981597 None:intergenic 55.0%
CCAACCTCATCCACCGATGT+AGG + chr7.4:16980298-16980317 None:intergenic 55.0%
CCCACACTCCTGAAGAGCTT+CGG - chr7.4:16981172-16981191 MS.gene014142:CDS 55.0%
CCCATGTCACCTTCTGGCAA+TGG - chr7.4:16981336-16981355 MS.gene014142:CDS 55.0%
CCTACATCGGTGGATGAGGT+TGG - chr7.4:16980295-16980314 MS.gene014142:CDS 55.0%
CTTCCAGGAAGATGCAAGGC+TGG + chr7.4:16981402-16981421 None:intergenic 55.0%
CTTTCTCGGGTCCCTTCTTC+GGG + chr7.4:16980983-16981002 None:intergenic 55.0%
GAACTCCCTCTTTCTCCTGC+TGG - chr7.4:16980793-16980812 MS.gene014142:CDS 55.0%
GAAGCTGCTTCTTGCAGCAG+GGG - chr7.4:16980528-16980547 MS.gene014142:CDS 55.0%
GACATCGAAGAAGGTGAGCC+AGG + chr7.4:16981288-16981307 None:intergenic 55.0%
GCCATTGCCAGAAGGTGACA+TGG + chr7.4:16981340-16981359 None:intergenic 55.0%
GGGCTCAAGGATGTCAATGC+TGG - chr7.4:16981863-16981882 MS.gene014142:CDS 55.0%
GGTGACATGGGTGGAGTGAA+TGG + chr7.4:16981327-16981346 None:intergenic 55.0%
GTCAAGCACGTCTTCTGCCA+TGG - chr7.4:16981236-16981255 MS.gene014142:CDS 55.0%
GTGAAGCTGCTTCTTGCAGC+AGG - chr7.4:16980526-16980545 MS.gene014142:CDS 55.0%
GTGCTCTTGTCAAGGCCACA+AGG + chr7.4:16980457-16980476 None:intergenic 55.0%
TCAGGTGAAGCCGACAAAGG+AGG + chr7.4:16980721-16980740 None:intergenic 55.0%
TCGCAAGGGATCGAAGCAGA+TGG - chr7.4:16980333-16980352 MS.gene014142:CDS 55.0%
TGAGCAAAGGACGCCGTTGA+TGG - chr7.4:16980360-16980379 MS.gene014142:CDS 55.0%
TGAGCCAGGCAACATGCTCA+TGG + chr7.4:16981274-16981293 None:intergenic 55.0%
TGAGCTTGGGAACAATGGCG+AGG - chr7.4:16982067-16982086 MS.gene014142:CDS 55.0%
TGTACCGTCCTTGCAGAGAC+GGG + chr7.4:16981124-16981143 None:intergenic 55.0%
TTCAACAGGAGATCCGGTGG+TGG + chr7.4:16980760-16980779 None:intergenic 55.0%
TTGCCAGAAGGTGACATGGG+TGG + chr7.4:16981336-16981355 None:intergenic 55.0%
! CCGAAGCTCTTCAGGAGTGT+GGG + chr7.4:16981175-16981194 None:intergenic 55.0%
!! GCTCTTCACTGTGCTGCTTC+CGG - chr7.4:16980478-16980497 MS.gene014142:CDS 55.0%
!! TGTCGGCTTCACCTGAGAAC+GGG - chr7.4:16980725-16980744 MS.gene014142:CDS 55.0%
!! TTCACTGTGCTGCTTCCGGT+GGG - chr7.4:16980482-16980501 MS.gene014142:CDS 55.0%
!!! CTCATGGGGTTTTCGAGTGC+TGG - chr7.4:16981076-16981095 MS.gene014142:CDS 55.0%
AGACGTGCTTGACCGAGGTG+AGG + chr7.4:16981229-16981248 None:intergenic 60.0%
AGCCTAAGCTTCCGCGAGCA+CGG - chr7.4:16981915-16981934 MS.gene014142:CDS 60.0%
ATTCACACATGTCCCCGCGC+CGG + chr7.4:16981053-16981072 None:intergenic 60.0%
CAGGGGAGAATGCCCGAAGA+AGG - chr7.4:16980968-16980987 MS.gene014142:CDS 60.0%
CTTCTTCGGGCATTCTCCCC+TGG + chr7.4:16980970-16980989 None:intergenic 60.0%
GACGGAGATGAAGACGGCAC+AGG + chr7.4:16980127-16980146 None:intergenic 60.0%
GACGTGCTTGACCGAGGTGA+GGG + chr7.4:16981228-16981247 None:intergenic 60.0%
GCAGAAGACGTGCTTGACCG+AGG + chr7.4:16981234-16981253 None:intergenic 60.0%
GCAGCCATGAGCATGTTGCC+TGG - chr7.4:16981267-16981286 MS.gene014142:CDS 60.0%
GCCGAAGCTCTTCAGGAGTG+TGG + chr7.4:16981176-16981195 None:intergenic 60.0%
GGAGAAGGAGACCCGTTCTC+AGG + chr7.4:16980739-16980758 None:intergenic 60.0%
GTTCTGCGGTTCCCTCACCT+CGG - chr7.4:16981214-16981233 MS.gene014142:CDS 60.0%
TGAGCCAGCAGCTGCAAGCA+TGG + chr7.4:16981949-16981968 None:intergenic 60.0%
TGGAGTTAGAGCCGTGCTCG+CGG + chr7.4:16981929-16981948 None:intergenic 60.0%
!! AGGAGATCCGGTGGTGGAGA+AGG + chr7.4:16980754-16980773 None:intergenic 60.0%
!! CTTCACTGTGCTGCTTCCGG+TGG - chr7.4:16980481-16980500 MS.gene014142:CDS 60.0%
!! TCACTGTGCTGCTTCCGGTG+GGG - chr7.4:16980483-16980502 MS.gene014142:CDS 60.0%
AGCCGTGCTCGCGGAAGCTT+AGG + chr7.4:16981920-16981939 None:intergenic 65.0%
AGCTGGCGCAGCACCTGAGA+TGG + chr7.4:16982165-16982184 None:intergenic 65.0%
CGGGTCTCCTTCTCCACCAC+CGG - chr7.4:16980744-16980763 MS.gene014142:CDS 65.0%
! ATCTCAGGTGCTGCGCCAGC+TGG - chr7.4:16982164-16982183 MS.gene014142:CDS 65.0%
! CCAGCTGGTTCCTCGGGTGA+GGG - chr7.4:16982179-16982198 MS.gene014142:CDS 65.0%
! TGCTGCGCCAGCTGGTTCCT+CGG - chr7.4:16982172-16982191 MS.gene014142:CDS 65.0%
CCCTCACCCGAGGAACCAGC+TGG + chr7.4:16982182-16982201 None:intergenic 70.0%
! GCCAGCTGGTTCCTCGGGTG+AGG - chr7.4:16982178-16982197 MS.gene014142:CDS 70.0%
! GCTGCGCCAGCTGGTTCCTC+GGG - chr7.4:16982173-16982192 MS.gene014142:CDS 70.0%
!! CGTAAGGGTGCTTGCCGGCG+CGG - chr7.4:16981036-16981055 MS.gene014142:CDS 70.0%
!! GTAAGGGTGCTTGCCGGCGC+GGG - chr7.4:16981037-16981056 MS.gene014142:CDS 70.0%
!! TAAGGGTGCTTGCCGGCGCG+GGG - chr7.4:16981038-16981057 MS.gene014142:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 16980097 16982301 16980097 ID=MS.gene014142
chr7.4 mRNA 16980097 16982301 16980097 ID=MS.gene014142.t1;Parent=MS.gene014142
chr7.4 exon 16980097 16982301 16980097 ID=MS.gene014142.t1.exon1;Parent=MS.gene014142.t1
chr7.4 CDS 16980097 16982301 16980097 ID=cds.MS.gene014142.t1;Parent=MS.gene014142.t1
Gene Sequence

>MS.gene014142

ATGTGCTGTGAGTCGGAGGGTTTAAAGCCTGTGCCGTCTTCATCTCCGTCTCTATCTCCAACTTCGACACACAATTCTCAACCGAGAAACCACACCATGAATCACTTAACTATCGGTACTGAAGATTCTTTTGCTAGCCTTCTTGAGCTTGCTGCTAATAACGACGTGGAAGGGTTCAAACGATTGATTGAGTATGATCCTACATCGGTGGATGAGGTTGGATTATGGTATGGTCGTCGCAAGGGATCGAAGCAGATGGTCAATGAGCAAAGGACGCCGTTGATGGTTGCTGCTACATATGGTAGCATTGATGTTATGAAAGTGATTATTTCTTTATCGGATGTTGATATCAACAGGCCTTGTGGCCTTGACAAGAGCACTGCTCTTCACTGTGCTGCTTCCGGTGGGGCTGAAAATGCTGTTGATGCTGTGAAGCTGCTTCTTGCAGCAGGGGCTGATCCTAATTCCGTGGATGCTAACGGGGATCGTCCGTTAGATGTTATTGTTTATTCCCCGAAGCTTGAACTTGTGAAAAACAGTCTTGAGGAGCTACTTCAAATTGATGGTCCTAGTGCTGGCTGTAATCTTAGGGTGATTACAAACTCGCTTAATTCTTATTCTCCTCCTTTGTCGGCTTCACCTGAGAACGGGTCTCCTTCTCCACCACCGGATCTCCTGTTGAAGTTGAAGTCAATTGAACTCCCTCTTTCTCCTGCTGGATCTGAGAAGAAAGAATATCCTGTTGATCCATCCCTTCCTGACATCAAAAACAGCATATACTCAACTGATGAATTCCGAATGTATTCTTTCAAGGTCCGACCTTGTTCGCGTGCTTATTCCCATGATTGGACTGAATGCCCTTTTGTTCATCCAGGGGAGAATGCCCGAAGAAGGGACCCGAGAAAGTATCACTACAGCTGTGTCCCTTGTCCTGATTTTCGTAAGGGTGCTTGCCGGCGCGGGGACATGTGTGAATATGCTCATGGGGTTTTCGAGTGCTGGCTGCATCCTGCACAATATAGAACCCGTCTCTGCAAGGACGGTACAAATTGTTCCAGGAGAGTTTGCTTCTTTGCCCACACTCCTGAAGAGCTTCGGCCATTGTATGTTTCAACTGGTTCTGCGGTTCCCTCACCTCGGTCAAGCACGTCTTCTGCCATGGATTTTGCTGCAGCCATGAGCATGTTGCCTGGCTCACCTTCTTCGATGTCTGTCATGTCTCCTTCACCATTCACTCCACCCATGTCACCTTCTGGCAATGGCATTTCACACAACTCTGTTGCTTGGCCTCAGCCAAACATCCCAGCCTTGCATCTTCCTGGAAGTAATCTTCAGTCTAGTCGTTTGAGATCTTCTCTCAATGCTAGAGATATTCATATGGATGATTTTGAGTTGTTATCCGATTATGATCAACAGCAACAACTCCTTAATGAGTTGGCATGCCTGTCTCCACGTCATATTAATTCTAACAGTCTTAGCCGCTCCGGTCGAATGAAGCCATTGAATCCATCAAATCTTGATGATCTCTTTTCTGCCGAGAGTTCTTCTCCTCGATATGCTGATCCAAATCTGACTTCAACTGTTTTTTCTCCGACTCACAAATCAGCTGTCTTTAATCAGTTTCAGCAGCAGCAGAACATGTTGTCACCAGTGAATACAAATTTTTCTTCTAAAAATGTTGATCATCATTTATTGCAGGCGGCTTCTTATGGTGTTCAGCCATCAGGAAGAATGTCTCCACGAAACGTGGAACCTATCTCTCCAATGGGCTCAAGGATGTCAATGCTGGCACAACGCGACAAGCAGCAACAATTTCGTAGCCTAAGCTTCCGCGAGCACGGCTCTAACTCCATGCTTGCAGCTGCTGGCTCAGTCAATAATTCTTGGTCAAAATGGGAATCCCCCAATGGTAAGTTGGATTGGGCTCACAATGCGGATGATGTTGGTAAACTCCGTAGATCATCTTCATTTGAGCTTGGGAACAATGGCGAGGAGCCTGATTTATCATGGGTGCAGTCACTTGTCAAAGAATCTCCAACTGAGATCAAAGAGAAATTGGCAACTTCCATCTCAGGTGCTGCGCCAGCTGGTTCCTCGGGTGAGGGAATGAATATGAGCACACAAATGGAGTCTGTTGATCATGCTGTATTGGGAACATGGCTTGAACAGATGCAGCTTGATCATCTTGTGGCTCAGCAAAACTGA
Protein sequence

>MS.gene014142.t1

MCCESEGLKPVPSSSPSLSPTSTHNSQPRNHTMNHLTIGTEDSFASLLELAANNDVEGFKRLIEYDPTSVDEVGLWYGRRKGSKQMVNEQRTPLMVAATYGSIDVMKVIISLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGADPNSVDANGDRPLDVIVYSPKLELVKNSLEELLQIDGPSAGCNLRVITNSLNSYSPPLSASPENGSPSPPPDLLLKLKSIELPLSPAGSEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTPEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMSMLPGSPSSMSVMSPSPFTPPMSPSGNGISHNSVAWPQPNIPALHLPGSNLQSSRLRSSLNARDIHMDDFELLSDYDQQQQLLNELACLSPRHINSNSLSRSGRMKPLNPSNLDDLFSAESSSPRYADPNLTSTVFSPTHKSAVFNQFQQQQNMLSPVNTNFSSKNVDHHLLQAASYGVQPSGRMSPRNVEPISPMGSRMSMLAQRDKQQQFRSLSFREHGSNSMLAAAGSVNNSWSKWESPNGKLDWAHNADDVGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKLATSISGAAPAGSSGEGMNMSTQMESVDHAVLGTWLEQMQLDHLVAQQN